Rw6G004490

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000103
Physical Location & Seq
Forward (+)
7181121 .. 7188404
7284 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G004490.1

Sequence Viewer

Length: 1248 bp
ATGCAAAGAGGTTCACCAAAGTCCTGTTTGAAAATGGATATTGAGCTTGACAAACTCAGTAACTTACCAAGGGATGTTACGGAAAAGAGTTTGTCAATTTTGCCAATAAAGGAGGCAGTGAGGACTAGTATATTATCGAGCGAGTGGAGGTACAAATGGGCTATGGTTCCAGATCTTGTGTTTGATGAACTGGGTTTCCTAGGAGTACTTTATAAGCATGACAAATTAGTGAAAATGGTTGATCATGTGCTCTTCCTTCACATTGGTCCAATAAACAAGGTCAAGCTTTCTCATACAGGTCTTAAGGGCACAGCAGATATTGATAGATGGATTCTTTATCTATCAATAAATTCTATGAAAGAGTTCATATTTAAGTTTTGCAAAAAGCCTGAATACAAGATGCCTTCATGTTTGTTTTCCTGTCAAGATTTGGTTCATTTGGAATTGTGCAATTGTTTGCTAAAACCTCCGCGCACATTCAAGGGCTTCAAGAATTTGAAGAAACTTGAAATTGAGAGTGTTACCCTGACCCAAGATGACTTTGAAAATCTAATTGTTTGTTGTCCTCTGCTGAAATATTTGACCATGATAGATTGTCGTGGTTTCACCAAGCTCAAGATTGATGCACCAAATCTCCAAATCTTTTGCCTTCTAGGTGCTTTTGAGGATCTTGGTTTTCAGAACACCTTAAAGCTTACAACTATTGCCATTTATTTAACAGCTAATGGTGACCAAAGAAGACAGAAACCTGGCAGTTCTAGCAATTTGCTCAAGCTTTTTGATCAGTGTGCTTATGTTCAAACTGCTTATATTCTTGGTTACTTTTTAAAGTATTTAGCTGTTGGCGACTTGCCGGTAAAGCGTCCTAAACCATGTCTGTATCTGAAGTTGCTTCGTATAAACATAGATTTCAATGATCTGAAGGAGGTTTTATCTACTTTATACCTTCTGAGAAGCGCCCCTGCTCTACAAAAATTATATATCAGAGTTCGTCAAGAGGGACAGGCTCTTGTGGGAGAGGTGAACTCCTGGTTAGATGGCAACCAGAATTTCCAACTCGGAAAACTGCAAATTGTGGAAGTACATGCTGTATTAGATTTCATCAAATTTCTGCTTTTAAATTCACCGATGCTCCAGAAGGTGTTTGTTAAGCCTGCATCTCACTATAGTTCTTCGGAACTATTAGTAAGGTTGAGCCAGTTTAGGTGCTCCTCACCACTTGCGGAGATAATGCACTTGGACCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

415

Amino Acids

47.54

Weight (kDa)

9.04

Isoelectric Point (pI)

38.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 104 - 215 3.4e-11 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 107 - 328 1.3e-18 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 213
AccII CGCG 1 cut(s) 472
AciI CCGC 2 cut(s) 470, 1223
AclWI GGATC 1 cut(s) 675
AcsI RAATTY 5 cut(s) 349, 493, 1048, 1106, 1120
AcuI CTGAAG 2 cut(s) 905, 941
AfaI GTAC 3 cut(s) 152, 207, 1083
AflII CTTAAG 1 cut(s) 302
AgsI TTSAA 8 cut(s) 31, 481, 490, 499, 509, 545, 800, 913
AhlI ACTAGT 1 cut(s) 125
AjnI CCWGG 2 cut(s) 748, 1028
AloI GAACNNNNNNTCC 2 cut(s) 180, 212
AluBI AGCT 7 cut(s) 46, 286, 613, 694, 722, 775, 839
AluI AGCT 7 cut(s) 46, 286, 613, 694, 722, 775, 839
Alw21I GWGCWC 2 cut(s) 252, 1211
AlwI GGATC 1 cut(s) 675
ApoI RAATTY 5 cut(s) 349, 493, 1048, 1106, 1120
Asp700I GAANNNNTTC 1 cut(s) 362
AspA2I CCTAGG 1 cut(s) 199
AspLEI GCGC 2 cut(s) 474, 959
AspS9I GGNCC 2 cut(s) 266, 1240
AsuHPI GGTGA 6 cut(s) 6, 598, 740, 1033, 1116, 1206
AvaII GGWCC 2 cut(s) 266, 1240
AvrII CCTAGG 1 cut(s) 199
BaeGI GKGCMC 1 cut(s) 311
BbsI GAAGAC 1 cut(s) 745
Bbv12I GWGCWC 2 cut(s) 252, 1211
BccI CCATC 2 cut(s) 321, 1031
BciT130I CCWGG 2 cut(s) 750, 1030
BclI TGATCA 2 cut(s) 241, 781
BcuI ACTAGT 1 cut(s) 125
BfaI CTAG 4 cut(s) 126, 200, 653, 759
BfmI CTRYAG 1 cut(s) 1165
BfoI RGCGCY 1 cut(s) 960
BfrI CTTAAG 1 cut(s) 302
BglII AGATCT 1 cut(s) 172
BlnI CCTAGG 1 cut(s) 199
BmcAI AGTACT 1 cut(s) 207
Bme1390I CCNGG 2 cut(s) 750, 1030
Bme18I GGWCC 2 cut(s) 266, 1240
BmgT120I GGNCC 2 cut(s) 266, 1240
BmiI GGNNCC 2 cut(s) 168, 1242
BmrFI CCNGG 2 cut(s) 750, 1030
BmrI ACTGGG 1 cut(s) 200
BmsI GCATC 4 cut(s) 390, 613, 1119, 1166
BmuI ACTGGG 1 cut(s) 200
BpiI GAAGAC 1 cut(s) 745
BplI GAGNNNNNCTC 2 cut(s) 1010, 1042
BpmI CTGGAG 1 cut(s) 1118
BpuEI CTTGAG 2 cut(s) 599, 755
BsaJI CCNNGG 2 cut(s) 68, 199
BsaXI ACNNNNNCTCC 4 cut(s) 618, 648, 1116, 1146
Bse118I RCCGGY 1 cut(s) 853
Bse1I ACTGG 2 cut(s) 195, 1198
BseBI CCWGG 2 cut(s) 750, 1030
BseDI CCNNGG 2 cut(s) 68, 199
BseGI GGATG 1 cut(s) 79
BseMII CTCAG 2 cut(s) 70, 941
BseNI ACTGG 2 cut(s) 195, 1198
BseRI GAGGAG 1 cut(s) 1201
BseSI GKGCMC 1 cut(s) 311
Bsh1236I CGCG 1 cut(s) 472
BsiHKAI GWGCWC 2 cut(s) 252, 1211
BsiSI CCGG 1 cut(s) 854
BslFI GGGAC 1 cut(s) 1014
BsmFI GGGAC 1 cut(s) 1014
Bsp1286I GDGCHC 3 cut(s) 252, 311, 1211
Bsp143I GATC 5 cut(s) 172, 241, 667, 781, 916
BspACI CCGC 2 cut(s) 470, 1223
BspCNI CTCAG 2 cut(s) 69, 942
BspFNI CGCG 1 cut(s) 472
BspLI GGNNCC 2 cut(s) 168, 1242
BspPI GGATC 1 cut(s) 675
BspQI GCTCTTC 1 cut(s) 257
BspTI CTTAAG 1 cut(s) 302
BsrFI RCCGGY 1 cut(s) 853
BsrI ACTGG 2 cut(s) 195, 1198
BssAI RCCGGY 1 cut(s) 853
BssECI CCNNGG 2 cut(s) 68, 199
BssMI GATC 5 cut(s) 172, 241, 667, 781, 916
BssT1I CCWWGG 2 cut(s) 68, 199
Bst2UI CCWGG 2 cut(s) 750, 1030
Bst6I CTCTTC 1 cut(s) 257
BstAFI CTTAAG 1 cut(s) 302
BstC8I GCNNGC 1 cut(s) 1155
BstDEI CTNAG 2 cut(s) 56, 950
BstEII GGTNACC 1 cut(s) 728
BstF5I GGATG 1 cut(s) 79
BstFNI CGCG 1 cut(s) 472
BstH2I RGCGCY 1 cut(s) 960
BstHHI GCGC 2 cut(s) 474, 959
BstKTI GATC 5 cut(s) 175, 244, 670, 784, 919
BstMBI GATC 5 cut(s) 172, 241, 667, 781, 916
BstMWI GCNNNNNNNGC 2 cut(s) 759, 859
BstNI CCWGG 2 cut(s) 750, 1030
BstNSI RCATGY 1 cut(s) 1088
BstPI GGTNACC 1 cut(s) 728
BstSCI CCNGG 2 cut(s) 748, 1028
BstSFI CTRYAG 1 cut(s) 1165
BstSLI GKGCMC 1 cut(s) 311
BstUI CGCG 1 cut(s) 472
BstV2I GAAGAC 1 cut(s) 745
BstX2I RGATCY 2 cut(s) 172, 667
BstYI RGATCY 2 cut(s) 172, 667
BtsCI GGATG 1 cut(s) 79
BtsI GCAGTG 1 cut(s) 123
BtsIMutI CAGTG 2 cut(s) 123, 791
Cac8I GCNNGC 1 cut(s) 1155
CfoI GCGC 2 cut(s) 474, 959
Cfr10I RCCGGY 1 cut(s) 853
Cfr13I GGNCC 2 cut(s) 266, 1240
CseI GACGC 1 cut(s) 851
Csp6I GTAC 3 cut(s) 151, 206, 1082
CviAII CATG 7 cut(s) 218, 245, 408, 586, 873, 1085, 1245
CviQI GTAC 3 cut(s) 151, 206, 1082
DdeI CTNAG 2 cut(s) 56, 950
DpnI GATC 5 cut(s) 174, 243, 669, 783, 918
DpnII GATC 5 cut(s) 172, 241, 667, 781, 916
DraI TTTAAA 2 cut(s) 828, 1119
Eam1104I CTCTTC 1 cut(s) 257
EarI CTCTTC 1 cut(s) 257
Eco130I CCWWGG 2 cut(s) 68, 199
Eco47I GGWCC 2 cut(s) 266, 1240
Eco57I CTGAAG 2 cut(s) 905, 941
Eco91I GGTNACC 1 cut(s) 728
EcoO65I GGTNACC 1 cut(s) 728
EcoRII CCWGG 2 cut(s) 748, 1028
EcoT14I CCWWGG 2 cut(s) 68, 199
ErhI CCWWGG 2 cut(s) 68, 199
FaeI CATG 7 cut(s) 221, 248, 411, 589, 876, 1088, 1248
FaqI GGGAC 1 cut(s) 1014
FatI CATG 7 cut(s) 217, 244, 407, 585, 872, 1084, 1244
FbaI TGATCA 2 cut(s) 241, 781
FokI GGATG 1 cut(s) 86
FspBI CTAG 4 cut(s) 126, 200, 653, 759
GlaI GCGC 2 cut(s) 473, 958
GsuI CTGGAG 1 cut(s) 1118
HaeII RGCGCY 1 cut(s) 960
HapII CCGG 1 cut(s) 854
HgaI GACGC 1 cut(s) 851
HhaI GCGC 2 cut(s) 474, 959
Hin1II CATG 7 cut(s) 221, 248, 411, 589, 876, 1088, 1248
Hin6I GCGC 2 cut(s) 472, 957
HinP1I GCGC 2 cut(s) 472, 957
HindIII AAGCTT 3 cut(s) 284, 692, 773
HinfI GANTC 1 cut(s) 331
HpaII CCGG 1 cut(s) 854
HphI GGTGA 6 cut(s) 6, 598, 740, 1033, 1116, 1206
Hpy166II GTNNAC 2 cut(s) 14, 1024
Hpy188I TCNGA 7 cut(s) 681, 885, 921, 951, 986, 1061, 1177
Hpy188III TCNNGA 6 cut(s) 170, 425, 490, 616, 995, 1135
Hpy8I GTNNAC 2 cut(s) 14, 1024
HpyAV CCTTC 6 cut(s) 266, 414, 659, 916, 956, 1132
HpyCH4V TGCA 7 cut(s) 4, 381, 450, 626, 1069, 1157, 1234
HpyF10VI GCNNNNNNNGC 2 cut(s) 759, 859
HpyF3I CTNAG 2 cut(s) 56, 950
Hsp92II CATG 7 cut(s) 221, 248, 411, 589, 876, 1088, 1248
HspAI GCGC 2 cut(s) 472, 957
Ksp22I TGATCA 2 cut(s) 241, 781
Kzo9I GATC 5 cut(s) 172, 241, 667, 781, 916
LguI GCTCTTC 1 cut(s) 257
LmnI GCTCC 2 cut(s) 1137, 1214
LweI GCATC 4 cut(s) 390, 613, 1119, 1166
MaeI CTAG 4 cut(s) 126, 200, 653, 759
MaeIII GTNAC 5 cut(s) 59, 76, 520, 728, 818
MalI GATC 5 cut(s) 174, 243, 669, 783, 918
MboI GATC 5 cut(s) 172, 241, 667, 781, 916
MboII GAAGA 4 cut(s) 244, 511, 750, 1164
MfeI CAATTG 1 cut(s) 451
MflI RGATCY 2 cut(s) 172, 667
MhlI GDGCHC 3 cut(s) 252, 311, 1211
MmeI TCCRAC 1 cut(s) 1078
MroXI GAANNNNTTC 1 cut(s) 362
MseI TTAA 7 cut(s) 303, 372, 689, 716, 827, 1118, 1149
MspCI CTTAAG 1 cut(s) 302
MspI CCGG 1 cut(s) 854
MspR9I CCNGG 2 cut(s) 750, 1030
MunI CAATTG 1 cut(s) 451
MvaI CCWGG 2 cut(s) 750, 1030
MvnI CGCG 1 cut(s) 472
MwoI GCNNNNNNNGC 2 cut(s) 759, 859
NdeII GATC 5 cut(s) 172, 241, 667, 781, 916
NlaIII CATG 7 cut(s) 221, 248, 411, 589, 876, 1088, 1248
NlaIV GGNNCC 2 cut(s) 168, 1242
NmuCI GTSAC 1 cut(s) 728
NspI RCATGY 1 cut(s) 1088
PciSI GCTCTTC 1 cut(s) 257
PdmI GAANNNNTTC 1 cut(s) 362
PfeI GAWTC 1 cut(s) 331
PsiI TTATAA 1 cut(s) 213
Psp6I CCWGG 2 cut(s) 748, 1028
PspEI GGTNACC 1 cut(s) 728
PspGI CCWGG 2 cut(s) 748, 1028
PspN4I GGNNCC 2 cut(s) 168, 1242
PspPI GGNCC 2 cut(s) 266, 1240
PsuI RGATCY 2 cut(s) 172, 667
RsaI GTAC 3 cut(s) 152, 207, 1083
RsaNI GTAC 3 cut(s) 151, 206, 1082
SapI GCTCTTC 1 cut(s) 257
SaqAI TTAA 7 cut(s) 303, 372, 689, 716, 827, 1118, 1149
Sau3AI GATC 5 cut(s) 172, 241, 667, 781, 916
Sau96I GGNCC 2 cut(s) 266, 1240
ScaI AGTACT 1 cut(s) 207
ScrFI CCNGG 2 cut(s) 750, 1030
SduI GDGCHC 3 cut(s) 252, 311, 1211
SfaNI GCATC 4 cut(s) 390, 613, 1119, 1166
SfcI CTRYAG 1 cut(s) 1165
SinI GGWCC 2 cut(s) 266, 1240
SmlI CTYRAG 3 cut(s) 302, 614, 770
SmoI CTYRAG 3 cut(s) 302, 614, 770
SpeI ACTAGT 1 cut(s) 125
SsiI CCGC 2 cut(s) 470, 1223
SspI AATATT 1 cut(s) 578
SspMI CTAG 4 cut(s) 126, 200, 653, 759
StyD4I CCNGG 2 cut(s) 748, 1028
StyI CCWWGG 2 cut(s) 68, 199
TaqI TCGA 1 cut(s) 137
TatI WGTACW 2 cut(s) 205, 1081
TfiI GAWTC 1 cut(s) 331
Tru1I TTAA 7 cut(s) 303, 372, 689, 716, 827, 1118, 1149
Tru9I TTAA 7 cut(s) 303, 372, 689, 716, 827, 1118, 1149
TscAI CASTG 2 cut(s) 123, 791
TseFI GTSAC 1 cut(s) 728
Tsp45I GTSAC 1 cut(s) 728
TspDTI ATGAA 6 cut(s) 201, 355, 371, 396, 425, 1090
TspGWI ACGGA 1 cut(s) 95
TspRI CASTG 2 cut(s) 123, 791
Vha464I CTTAAG 1 cut(s) 302
VpaK11BI GGWCC 2 cut(s) 266, 1240
XapI RAATTY 5 cut(s) 349, 493, 1048, 1106, 1120
XceI RCATGY 1 cut(s) 1088
XmaJI CCTAGG 1 cut(s) 199
XmnI GAANNNNTTC 1 cut(s) 362
XspI CTAG 4 cut(s) 126, 200, 653, 759
ZrmI AGTACT 1 cut(s) 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.