Prupe.1G384700_v2.0.a1

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000103
Physical Location & Seq
Forward (+)
34495513 .. 34498260
2748 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G384700.2

Sequence Viewer

Length: 1269 bp
ATGATGCAAAGACAACCACTGAAGTCCCCTTGCAAACCGCAGATGGAGTTGGATAGGATTAGCAACTTACCGTGTCATGTAGCAGAACAAATTCTGTCGTGTTTGCCGATTAGGGAGGCAGTGAGGACAAGTGTTTTGTCAAGCAAGTGGAGGTACAAATGGGCTATGGTTGCGCATCTTGTGTTCGATAATCACTGTCTCTCGGCTCAAAACCGAACAACCTTTGTCAACATTGTTGATCATGTACTCTTACTTCACATTGGCCCCATACACAAGTTCAAGCTTTCAAATCGAGATTTTCTAGCCACTAGTGATATTGATCGATGGATTCTTCATCTATCAAGAAGCTCTATCAAAGAGTTCATACTTGAAATTTGGAAAGGGAATCGCTACAAGATGCACTCATCTGTATTTTCTTGCCAAGATATGACTCATTTGGAGTTATTCAATTGTTTGTTAAGACCTCCGCCAACATTCAAAGGCTTCAGCAGATTGAAGAGCCTTGATCTTCAGCATGTTACCTTGGCCCAAGACGTCTTTGATAATATGGTTGTTCGCTGTCCTCTGCTTGAGAAATTGACTGTGATGAACTTTGACGGTTTCACCCTTCTCAACATTGATGCACCAAATCTCCAATTCTTTGACGTTGGAGGTGTTTTTGAAGATGTTAATTTTAAGAATACCTTAAATCTTGCTGTAGTCTCCATTGGTTTGTACGAGCATGTTTGCAACTACCAAAGACGAGGGCCTCCTGGCAGTTCTAGCCATTTGCTCAAGTTTTTTGCTCACCTGCCTCGTATTCAAAGACTGGAAATTCAGAGTTACTTTTTAAAGTATTTGGCTATTGGTACCTTGCCAGCAAAGCTGCCTAAACCATGTCTAGTTCTGAATTATCTTTCTATTCGCATAAGCTTCACTGATTCAGATGAGATCTTAACTGCTGTATGCCTTTTAAGAAGCTCCCCTGCTCTACAAGAATTAGAAATTTTGGTCCGCCCGGAGGATACAACTTGTGCAGGAACGGTTAACTTTCAGCTAGATGACAACTGGAATGGTCCAATTGCGCGACTCCGCCGTGTGAAAATAAACGGCATCGCTGGTACCAAACCCGAACTAGAATTCATCAGACTTCTACTTTTAGGTTCACCTGCGCTTGAGAAGATGACTGTTAAGCCCGCTTCTGTCACCTGTGGTTGGGAGATTGTAAAGAAGTTGCTTCAGTATAGGCGCGCCTCAGTACATGCAGAGATAATCTACTTGGATCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

423

Amino Acids

48.25

Weight (kDa)

9.01

Isoelectric Point (pI)

47.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 798, 1156
AatII GACGTC 1 cut(s) 537
Acc16I TGCGCA 1 cut(s) 174
Acc36I ACCTGC 2 cut(s) 798, 1156
Acc65I GGTACC 2 cut(s) 848, 1100
AccB1I GGYRCC 2 cut(s) 848, 1100
AccII CGCG 2 cut(s) 1066, 1230
AciI CCGC 5 cut(s) 38, 467, 994, 1072, 1176
AclWI GGATC 1 cut(s) 1256
AcsI RAATTY 5 cut(s) 90, 372, 813, 984, 1118
AcuI CTGAAG 4 cut(s) 41, 469, 494, 1202
AcyI GRCGYC 1 cut(s) 534
AfaI GTAC 6 cut(s) 155, 246, 716, 850, 1102, 1239
AfiI CCNNNNNNNGG 2 cut(s) 1000, 1194
AgsI TTSAA 8 cut(s) 280, 288, 371, 448, 478, 496, 662, 803
AhlI ACTAGT 1 cut(s) 308
AjnI CCWGG 1 cut(s) 751
AluBI AGCT 6 cut(s) 283, 348, 865, 912, 960, 1036
AluI AGCT 6 cut(s) 283, 348, 865, 912, 960, 1036
Alw26I GTCTC 2 cut(s) 203, 706
AlwI GGATC 1 cut(s) 1256
AoxI GGCC 3 cut(s) 262, 525, 746
ApeKI GCWGC 1 cut(s) 865
ApoI RAATTY 5 cut(s) 90, 372, 813, 984, 1118
ArsI GACNNNNNNTTYG 2 cut(s) 118, 150
AscI GGCGCGCC 1 cut(s) 1228
Asp700I GAANNNNTTC 1 cut(s) 90
Asp718I GGTACC 2 cut(s) 848, 1100
AspLEI GCGC 5 cut(s) 175, 1066, 1153, 1230, 1232
AspS9I GGNCC 5 cut(s) 263, 526, 746, 991, 1055
AsuC2I CCSGG 1 cut(s) 998
AsuHPI GGTGA 4 cut(s) 595, 779, 1137, 1177
AvaII GGWCC 2 cut(s) 991, 1055
BamHI GGATCC 1 cut(s) 1261
BanI GGYRCC 2 cut(s) 848, 1100
BarI GAAGNNNNNNTAC 2 cut(s) 237, 269
BbvI GCAGC 1 cut(s) 852
BccI CCATC 2 cut(s) 37, 318
BceAI ACGGC 2 cut(s) 1059, 1105
BciT130I CCWGG 1 cut(s) 753
BciVI GTATCC 1 cut(s) 997
BclI TGATCA 1 cut(s) 238
BcnI CCSGG 1 cut(s) 998
BcoDI GTCTC 2 cut(s) 203, 706
BcuI ACTAGT 1 cut(s) 308
BfaI CTAG 6 cut(s) 302, 309, 762, 881, 1037, 1115
BfmI CTRYAG 1 cut(s) 696
BfuAI ACCTGC 2 cut(s) 798, 1156
BfuI GTATCC 1 cut(s) 997
BglII AGATCT 1 cut(s) 930
BisI GCNGC 1 cut(s) 866
BlsI GCNGC 1 cut(s) 867
Bme1390I CCNGG 2 cut(s) 753, 998
Bme18I GGWCC 2 cut(s) 991, 1055
BmgT120I GGNCC 5 cut(s) 263, 526, 746, 991, 1055
BmiI GGNNCC 4 cut(s) 265, 850, 1102, 1263
BmrFI CCNGG 2 cut(s) 753, 998
BmsI GCATC 4 cut(s) 184, 387, 610, 1101
BpuEI CTTGAG 3 cut(s) 590, 758, 1175
BpuMI CCSGG 1 cut(s) 998
Bsa29I ATCGAT 1 cut(s) 322
BsaBI GATNNNNATC 1 cut(s) 318
BsaHI GRCGYC 1 cut(s) 534
BsaJI CCNNGG 1 cut(s) 522
BsaXI ACNNNNNCTCC 2 cut(s) 615, 645
Bsc4I CCNNNNNNNGG 2 cut(s) 1000, 1194
Bse1I ACTGG 2 cut(s) 813, 1052
Bse8I GATNNNNATC 1 cut(s) 318
BseBI CCWGG 1 cut(s) 753
BseCI ATCGAT 1 cut(s) 322
BseDI CCNNGG 1 cut(s) 522
BseJI GATNNNNATC 1 cut(s) 318
BseLI CCNNNNNNNGG 2 cut(s) 1000, 1194
BseMII CTCAG 1 cut(s) 1248
BseNI ACTGG 2 cut(s) 813, 1052
BsePI GCGCGC 1 cut(s) 1228
BseXI GCAGC 1 cut(s) 852
BsgI GTGCAG 1 cut(s) 1035
Bsh1236I CGCG 2 cut(s) 1066, 1230
BshFI GGCC 3 cut(s) 264, 527, 748
BshNI GGYRCC 2 cut(s) 848, 1100
BshVI ATCGAT 1 cut(s) 322
BsiSI CCGG 1 cut(s) 998
BslFI GGGAC 1 cut(s) 10
BslI CCNNNNNNNGG 2 cut(s) 1000, 1194
BsmAI GTCTC 2 cut(s) 203, 706
BsmFI GGGAC 1 cut(s) 10
BsnI GGCC 3 cut(s) 264, 527, 748
Bsp143I GATC 5 cut(s) 238, 319, 505, 930, 1261
BspACI CCGC 5 cut(s) 38, 467, 994, 1072, 1176
BspANI GGCC 3 cut(s) 264, 527, 748
BspCNI CTCAG 1 cut(s) 1247
BspDI ATCGAT 1 cut(s) 322
BspFNI CGCG 2 cut(s) 1066, 1230
BspLI GGNNCC 4 cut(s) 265, 850, 1102, 1263
BspMI ACCTGC 2 cut(s) 798, 1156
BspPI GGATC 1 cut(s) 1256
BspQI GCTCTTC 1 cut(s) 491
BspT107I GGYRCC 2 cut(s) 848, 1100
BsrI ACTGG 2 cut(s) 813, 1052
BssECI CCNNGG 1 cut(s) 522
BssHII GCGCGC 1 cut(s) 1228
BssMI GATC 5 cut(s) 238, 319, 505, 930, 1261
BssNI GRCGYC 1 cut(s) 534
BssT1I CCWWGG 1 cut(s) 522
Bst2UI CCWGG 1 cut(s) 753
Bst4CI ACNGT 6 cut(s) 72, 197, 583, 599, 1024, 1168
Bst6I CTCTTC 1 cut(s) 491
BstACI GRCGYC 1 cut(s) 534
BstC8I GCNNGC 3 cut(s) 858, 1176, 1230
BstDEI CTNAG 1 cut(s) 1234
BstFNI CGCG 2 cut(s) 1066, 1230
BstHHI GCGC 5 cut(s) 175, 1066, 1153, 1230, 1232
BstKTI GATC 5 cut(s) 241, 322, 508, 933, 1264
BstMAI GTCTC 2 cut(s) 203, 706
BstMBI GATC 5 cut(s) 238, 319, 505, 930, 1261
BstMWI GCNNNNNNNGC 3 cut(s) 170, 762, 862
BstNI CCWGG 1 cut(s) 753
BstNSI RCATGY 3 cut(s) 518, 725, 1244
BstSCI CCNGG 2 cut(s) 751, 996
BstSFI CTRYAG 1 cut(s) 696
BstUI CGCG 2 cut(s) 1066, 1230
BstV1I GCAGC 1 cut(s) 852
BstX2I RGATCY 2 cut(s) 930, 1261
BstYI RGATCY 2 cut(s) 930, 1261
Bsu15I ATCGAT 1 cut(s) 322
BsuI GTATCC 1 cut(s) 997
BsuRI GGCC 3 cut(s) 264, 527, 748
BsuTUI ATCGAT 1 cut(s) 322
BtgZI GCGATG 1 cut(s) 1078
BtsI GCAGTG 1 cut(s) 126
BtsIMutI CAGTG 4 cut(s) 17, 126, 193, 915
BveI ACCTGC 2 cut(s) 798, 1156
Cac8I GCNNGC 3 cut(s) 858, 1176, 1230
CfoI GCGC 5 cut(s) 175, 1066, 1153, 1230, 1232
Cfr13I GGNCC 5 cut(s) 263, 526, 746, 991, 1055
ClaI ATCGAT 1 cut(s) 322
Csp6I GTAC 6 cut(s) 154, 245, 715, 849, 1101, 1238
CviAII CATG 7 cut(s) 77, 242, 515, 722, 876, 1241, 1266
CviQI GTAC 6 cut(s) 154, 245, 715, 849, 1101, 1238
DdeI CTNAG 1 cut(s) 1234
DpnI GATC 5 cut(s) 240, 321, 507, 932, 1263
DpnII GATC 5 cut(s) 238, 319, 505, 930, 1261
DraI TTTAAA 1 cut(s) 831
Eam1104I CTCTTC 1 cut(s) 491
EarI CTCTTC 1 cut(s) 491
EciI GGCGGA 3 cut(s) 456, 983, 1061
Eco130I CCWWGG 1 cut(s) 522
Eco47I GGWCC 2 cut(s) 991, 1055
Eco57I CTGAAG 4 cut(s) 41, 469, 494, 1202
EcoO109I RGGNCCY 1 cut(s) 746
EcoRI GAATTC 1 cut(s) 1118
EcoRII CCWGG 1 cut(s) 751
EcoT14I CCWWGG 1 cut(s) 522
ErhI CCWWGG 1 cut(s) 522
FaeI CATG 7 cut(s) 80, 245, 518, 725, 879, 1244, 1269
FalI AAGNNNNNCTT 2 cut(s) 668, 700
FaqI GGGAC 1 cut(s) 10
FatI CATG 7 cut(s) 76, 241, 514, 721, 875, 1240, 1265
FauI CCCGC 1 cut(s) 1183
FbaI TGATCA 1 cut(s) 238
Fnu4HI GCNGC 1 cut(s) 866
Fsp4HI GCNGC 1 cut(s) 866
FspBI CTAG 6 cut(s) 302, 309, 762, 881, 1037, 1115
FspI TGCGCA 1 cut(s) 174
GlaI GCGC 5 cut(s) 174, 1065, 1152, 1229, 1231
GluI GCNGC 1 cut(s) 866
HaeIII GGCC 3 cut(s) 264, 527, 748
HapII CCGG 1 cut(s) 998
HhaI GCGC 5 cut(s) 175, 1066, 1153, 1230, 1232
Hin1I GRCGYC 1 cut(s) 534
Hin1II CATG 7 cut(s) 80, 245, 518, 725, 879, 1244, 1269
Hin6I GCGC 5 cut(s) 173, 1064, 1151, 1228, 1230
HinP1I GCGC 5 cut(s) 173, 1064, 1151, 1228, 1230
HincII GTYRAC 2 cut(s) 229, 1027
HindII GTYRAC 2 cut(s) 229, 1027
HindIII AAGCTT 2 cut(s) 281, 910
HinfI GANTC 5 cut(s) 328, 385, 430, 920, 1068
HpaI GTTAAC 1 cut(s) 1027
HpaII CCGG 1 cut(s) 998
HphI GGTGA 4 cut(s) 595, 779, 1137, 1177
Hpy166II GTNNAC 3 cut(s) 229, 1027, 1145
Hpy188I TCNGA 4 cut(s) 819, 888, 925, 1127
Hpy188III TCNNGA 2 cut(s) 293, 342
Hpy8I GTNNAC 3 cut(s) 229, 1027, 1145
HpyAV CCTTC 1 cut(s) 617
HpyCH4III ACNGT 6 cut(s) 72, 197, 583, 599, 1024, 1168
HpyCH4IV ACGT 2 cut(s) 534, 645
HpyCH4V TGCA 7 cut(s) 7, 33, 400, 623, 729, 1016, 1244
HpyF10VI GCNNNNNNNGC 3 cut(s) 170, 762, 862
HpyF3I CTNAG 1 cut(s) 1234
HpySE526I ACGT 2 cut(s) 534, 645
Hsp92I GRCGYC 1 cut(s) 534
Hsp92II CATG 7 cut(s) 80, 245, 518, 725, 879, 1244, 1269
HspAI GCGC 5 cut(s) 173, 1064, 1151, 1228, 1230
KpnI GGTACC 2 cut(s) 852, 1104
Ksp22I TGATCA 1 cut(s) 238
KspAI GTTAAC 1 cut(s) 1027
Kzo9I GATC 5 cut(s) 238, 319, 505, 930, 1261
LguI GCTCTTC 1 cut(s) 491
LmnI GCTCC 1 cut(s) 965
Lsp1109I GCAGC 1 cut(s) 852
LweI GCATC 4 cut(s) 184, 387, 610, 1101
MaeI CTAG 6 cut(s) 302, 309, 762, 881, 1037, 1115
MaeII ACGT 2 cut(s) 534, 645
MaeIII GTNAC 3 cut(s) 517, 821, 1183
MalI GATC 5 cut(s) 240, 321, 507, 932, 1263
MboI GATC 5 cut(s) 238, 319, 505, 930, 1261
MboII GAAGA 5 cut(s) 323, 500, 508, 674, 1171
MfeI CAATTG 2 cut(s) 448, 1059
MflI RGATCY 2 cut(s) 930, 1261
MlyI GAGTC 2 cut(s) 424, 1062
MmeI TCCRAC 2 cut(s) 30, 628
MroXI GAANNNNTTC 1 cut(s) 90
MseI TTAA 9 cut(s) 458, 669, 675, 686, 830, 935, 953, 1026, 1170
MspI CCGG 1 cut(s) 998
MspR9I CCNGG 2 cut(s) 753, 998
MunI CAATTG 2 cut(s) 448, 1059
MvaI CCWGG 1 cut(s) 753
MvnI CGCG 2 cut(s) 1066, 1230
MwoI GCNNNNNNNGC 3 cut(s) 170, 762, 862
NciI CCSGG 1 cut(s) 998
NdeII GATC 5 cut(s) 238, 319, 505, 930, 1261
NlaIII CATG 7 cut(s) 80, 245, 518, 725, 879, 1244, 1269
NlaIV GGNNCC 4 cut(s) 265, 850, 1102, 1263
NmeAIII GCCGAG 1 cut(s) 182
NmuCI GTSAC 1 cut(s) 1183
NsbI TGCGCA 1 cut(s) 174
NspI RCATGY 3 cut(s) 518, 725, 1244
PalAI GGCGCGCC 1 cut(s) 1228
PaqCI CACCTGC 2 cut(s) 798, 1156
PauI GCGCGC 1 cut(s) 1228
PciSI GCTCTTC 1 cut(s) 491
PcsI WCGNNNNNNNCGW 1 cut(s) 104
PdmI GAANNNNTTC 1 cut(s) 90
PfeI GAWTC 3 cut(s) 328, 385, 920
PkrI GCNGC 1 cut(s) 867
PleI GAGTC 2 cut(s) 424, 1062
PpsI GAGTC 2 cut(s) 424, 1062
Psp6I CCWGG 1 cut(s) 751
PspGI CCWGG 1 cut(s) 751
PspN4I GGNNCC 4 cut(s) 265, 850, 1102, 1263
PspPI GGNCC 5 cut(s) 263, 526, 746, 991, 1055
PsuI RGATCY 2 cut(s) 930, 1261
PteI GCGCGC 1 cut(s) 1228
RsaI GTAC 6 cut(s) 155, 246, 716, 850, 1102, 1239
RsaNI GTAC 6 cut(s) 154, 245, 715, 849, 1101, 1238
SapI GCTCTTC 1 cut(s) 491
SaqAI TTAA 9 cut(s) 458, 669, 675, 686, 830, 935, 953, 1026, 1170
SatI GCNGC 1 cut(s) 866
Sau3AI GATC 5 cut(s) 238, 319, 505, 930, 1261
Sau96I GGNCC 5 cut(s) 263, 526, 746, 991, 1055
SchI GAGTC 2 cut(s) 424, 1062
ScrFI CCNGG 2 cut(s) 753, 998
SfaNI GCATC 4 cut(s) 184, 387, 610, 1101
SfcI CTRYAG 1 cut(s) 696
SgsI GGCGCGCC 1 cut(s) 1228
SinI GGWCC 2 cut(s) 991, 1055
SmlI CTYRAG 3 cut(s) 569, 773, 1154
SmoI CTYRAG 3 cut(s) 569, 773, 1154
SpeI ACTAGT 1 cut(s) 308
SsiI CCGC 5 cut(s) 38, 467, 994, 1072, 1176
SspMI CTAG 6 cut(s) 302, 309, 762, 881, 1037, 1115
StyD4I CCNGG 2 cut(s) 751, 996
StyI CCWWGG 1 cut(s) 522
TaaI ACNGT 6 cut(s) 72, 197, 583, 599, 1024, 1168
TaiI ACGT 2 cut(s) 537, 648
TaqI TCGA 3 cut(s) 186, 292, 322
TatI WGTACW 2 cut(s) 244, 1237
TfiI GAWTC 3 cut(s) 328, 385, 920
Tru1I TTAA 9 cut(s) 458, 669, 675, 686, 830, 935, 953, 1026, 1170
Tru9I TTAA 9 cut(s) 458, 669, 675, 686, 830, 935, 953, 1026, 1170
TscAI CASTG 4 cut(s) 24, 126, 200, 922
TseFI GTSAC 1 cut(s) 1183
TseI GCWGC 1 cut(s) 865
Tsp45I GTSAC 1 cut(s) 1183
TspDTI ATGAA 4 cut(s) 323, 352, 602, 1111
TspRI CASTG 4 cut(s) 24, 126, 200, 922
VpaK11BI GGWCC 2 cut(s) 991, 1055
XapI RAATTY 5 cut(s) 90, 372, 813, 984, 1118
XceI RCATGY 3 cut(s) 518, 725, 1244
XmnI GAANNNNTTC 1 cut(s) 90
XspI CTAG 6 cut(s) 302, 309, 762, 881, 1037, 1115
ZraI GACGTC 1 cut(s) 535
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.