Rh3BG070200

UDP-glucose flavonoid 3-O-glucosyltransferase 7-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Reverse (-)
4702987 .. 4703628
642 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG070200.1

Sequence Viewer

Length: 642 bp
ATGGGACTGAAAATGGAGTTGGATAGACTTAGCAGTTTACCAGATGATGTTACAGAAAAGATTTTGGAACGTTTGCCGCTTAAGGAGGCTGTAAGGACAAGTATTTTATCCAGAAAGTGGAGGTACAAATCGGAAATGCTTCAAACTCTATTGTTTCATAATAACTGTGTTTCGACTCAAAGTCATCCAACCTACAGCTTTGCGAATATTGTTGATCATGTACTCTTACTCCATAAAGGTCCCATACACAGGTTCGAGCTTTCTTTCAATGGTAAGCTAGCCACTAGGGATATAGATCGATGGATTTTTCACCTATCCAGAAACCCTGTCATCGAACAGATGATACTTGACAATTTTGAAGGGGACGTCTACAACATTCCGTCCTGTTTGTTTTCTTTTCAAGATATCGTTCATTTAGAGTTATACAGGTGTTTGCTAAACCCTCCTTCCACATTCAAAGGCTTTGGCAGCTTGAAGAGCCTTGATCTTTGGTCTGTTACTTTGGCCCAACATGTGTTTGACAACTTGATTGGTTGCAGTCCTGTGCTTGAGATATTGAAATTGCAAAGATGTGATGGTTTCACCAATCTCAAGATTGATGCACCCAAGCTCTGGTTTATTTACATAATATGGGGCCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

213

Amino Acids

24.75

Weight (kDa)

7.08

Isoelectric Point (pI)

41.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 10 - 43 7e-09 F-box domain
LRR_At1g61320_AtMIF1 PF23622 86 - 200 6.6e-12 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 98 - 209 4.4e-11 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 369
AccB7I CCANNNNNTGG 2 cut(s) 117, 612
AccI GTMKAC 1 cut(s) 369
AciI CCGC 1 cut(s) 77
AclI AACGTT 1 cut(s) 70
AcyI GRCGYC 1 cut(s) 366
AfaI GTAC 2 cut(s) 125, 222
AfiI CCNNNNNNNGG 3 cut(s) 117, 249, 612
AflII CTTAAG 1 cut(s) 80
AflIII ACRYGT 1 cut(s) 511
AgsI TTSAA 7 cut(s) 143, 268, 359, 401, 457, 475, 559
AhdI GACNNNNNGTC 1 cut(s) 180
AjuI GAANNNNNNNTTGG 1 cut(s) 34
AluBI AGCT 5 cut(s) 198, 259, 277, 471, 610
AluI AGCT 5 cut(s) 198, 259, 277, 471, 610
AoxI GGCC 2 cut(s) 504, 634
ApeKI GCWGC 1 cut(s) 468
Asp700I GAANNNNTTC 1 cut(s) 138
AspS9I GGNCC 3 cut(s) 239, 505, 634
AsuHPI GGTGA 2 cut(s) 302, 574
AsuNHI GCTAGC 1 cut(s) 277
AvaII GGWCC 1 cut(s) 239
BbvI GCAGC 1 cut(s) 480
BccI CCATC 2 cut(s) 294, 569
BclI TGATCA 1 cut(s) 214
BfaI CTAG 2 cut(s) 278, 285
BfmI CTRYAG 1 cut(s) 193
BfrI CTTAAG 1 cut(s) 80
BisI GCNGC 2 cut(s) 77, 469
BlsI GCNGC 2 cut(s) 78, 470
Bme18I GGWCC 1 cut(s) 239
BmeRI GACNNNNNGTC 1 cut(s) 180
BmgT120I GGNCC 3 cut(s) 239, 505, 634
BmiI GGNNCC 2 cut(s) 241, 635
BmsI GCATC 1 cut(s) 589
BmtI GCTAGC 1 cut(s) 281
BpuEI CTTGAG 2 cut(s) 569, 575
Bsa29I ATCGAT 1 cut(s) 298
BsaBI GATNNNNATC 1 cut(s) 294
BsaHI GRCGYC 1 cut(s) 366
BsaXI ACNNNNNCTCC 2 cut(s) 213, 243
Bsc4I CCNNNNNNNGG 3 cut(s) 117, 249, 612
Bse8I GATNNNNATC 1 cut(s) 294
BseCI ATCGAT 1 cut(s) 298
BseGI GGATG 1 cut(s) 184
BseJI GATNNNNATC 1 cut(s) 294
BseLI CCNNNNNNNGG 3 cut(s) 117, 249, 612
BseXI GCAGC 1 cut(s) 480
BshFI GGCC 2 cut(s) 506, 636
BshVI ATCGAT 1 cut(s) 298
BslFI GGGAC 3 cut(s) 18, 225, 377
BslI CCNNNNNNNGG 3 cut(s) 117, 249, 612
BsmFI GGGAC 3 cut(s) 18, 225, 377
BsnI GGCC 2 cut(s) 506, 636
Bsp143I GATC 3 cut(s) 214, 295, 484
BspACI CCGC 1 cut(s) 77
BspANI GGCC 2 cut(s) 506, 636
BspDI ATCGAT 1 cut(s) 298
BspLI GGNNCC 2 cut(s) 241, 635
BspOI GCTAGC 1 cut(s) 281
BspQI GCTCTTC 1 cut(s) 470
BspTI CTTAAG 1 cut(s) 80
BssMI GATC 3 cut(s) 214, 295, 484
BssNI GRCGYC 1 cut(s) 366
Bst4CI ACNGT 1 cut(s) 167
Bst6I CTCTTC 1 cut(s) 470
BstACI GRCGYC 1 cut(s) 366
BstAFI CTTAAG 1 cut(s) 80
BstC8I GCNNGC 1 cut(s) 279
BstDEI CTNAG 1 cut(s) 29
BstF5I GGATG 1 cut(s) 184
BstKTI GATC 3 cut(s) 217, 298, 487
BstMBI GATC 3 cut(s) 214, 295, 484
BstMWI GCNNNNNNNGC 2 cut(s) 468, 477
BstNSI RCATGY 1 cut(s) 515
BstSFI CTRYAG 1 cut(s) 193
BstV1I GCAGC 1 cut(s) 480
Bsu15I ATCGAT 1 cut(s) 298
BsuRI GGCC 2 cut(s) 506, 636
BsuTUI ATCGAT 1 cut(s) 298
BtsCI GGATG 1 cut(s) 184
Cac8I GCNNGC 1 cut(s) 279
Cfr13I GGNCC 3 cut(s) 239, 505, 634
ClaI ATCGAT 1 cut(s) 298
Csp6I GTAC 2 cut(s) 124, 221
CviAII CATG 2 cut(s) 218, 512
CviQI GTAC 2 cut(s) 124, 221
DdeI CTNAG 1 cut(s) 29
DpnI GATC 3 cut(s) 216, 297, 486
DpnII GATC 3 cut(s) 214, 295, 484
DriI GACNNNNNGTC 1 cut(s) 180
Eam1104I CTCTTC 1 cut(s) 470
Eam1105I GACNNNNNGTC 1 cut(s) 180
EarI CTCTTC 1 cut(s) 470
Eco32I GATATC 1 cut(s) 406
Eco47I GGWCC 1 cut(s) 239
EcoO109I RGGNCCY 2 cut(s) 239, 634
EcoRV GATATC 1 cut(s) 406
FaeI CATG 2 cut(s) 221, 515
FaiI YATR 9 cut(s) 159, 219, 234, 245, 293, 424, 513, 626, 631
FaqI GGGAC 3 cut(s) 18, 225, 377
FatI CATG 2 cut(s) 217, 511
FbaI TGATCA 1 cut(s) 214
FblI GTMKAC 1 cut(s) 369
Fnu4HI GCNGC 2 cut(s) 77, 469
FokI GGATG 1 cut(s) 171
Fsp4HI GCNGC 2 cut(s) 77, 469
FspBI CTAG 2 cut(s) 278, 285
GluI GCNGC 2 cut(s) 77, 469
HaeIII GGCC 2 cut(s) 506, 636
Hin1I GRCGYC 1 cut(s) 366
Hin1II CATG 2 cut(s) 221, 515
HinfI GANTC 1 cut(s) 175
HphI GGTGA 2 cut(s) 302, 574
Hpy166II GTNNAC 2 cut(s) 38, 370
Hpy188I TCNGA 1 cut(s) 133
Hpy188III TCNNGA 4 cut(s) 111, 318, 401, 592
Hpy8I GTNNAC 2 cut(s) 38, 370
HpyAV CCTTC 2 cut(s) 353, 456
HpyCH4III ACNGT 1 cut(s) 167
HpyCH4IV ACGT 2 cut(s) 70, 366
HpyCH4V TGCA 3 cut(s) 537, 565, 602
HpyF10VI GCNNNNNNNGC 2 cut(s) 468, 477
HpyF3I CTNAG 1 cut(s) 29
HpySE526I ACGT 2 cut(s) 70, 366
Hsp92I GRCGYC 1 cut(s) 366
Hsp92II CATG 2 cut(s) 221, 515
Ksp22I TGATCA 1 cut(s) 214
Kzo9I GATC 3 cut(s) 214, 295, 484
LguI GCTCTTC 1 cut(s) 470
LpnPI CCDG 9 cut(s) 54, 124, 235, 331, 339, 397, 412, 555, 598
Lsp1109I GCAGC 1 cut(s) 480
LweI GCATC 1 cut(s) 589
MaeI CTAG 2 cut(s) 278, 285
MaeII ACGT 2 cut(s) 70, 366
MaeIII GTNAC 2 cut(s) 49, 496
MalI GATC 3 cut(s) 216, 297, 486
MboI GATC 3 cut(s) 214, 295, 484
MboII GAAGA 1 cut(s) 487
MluCI AATT 2 cut(s) 352, 560
MlyI GAGTC 1 cut(s) 169
MmeI TCCRAC 1 cut(s) 212
MnlI CCTC 3 cut(s) 79, 114, 453
MroXI GAANNNNTTC 1 cut(s) 138
MseI TTAA 1 cut(s) 81
MspCI CTTAAG 1 cut(s) 80
MwoI GCNNNNNNNGC 2 cut(s) 468, 477
NdeII GATC 3 cut(s) 214, 295, 484
NheI GCTAGC 1 cut(s) 277
NlaIII CATG 2 cut(s) 221, 515
NlaIV GGNNCC 2 cut(s) 241, 635
NspI RCATGY 1 cut(s) 515
PciI ACATGT 1 cut(s) 511
PciSI GCTCTTC 1 cut(s) 470
PdmI GAANNNNTTC 1 cut(s) 138
PflMI CCANNNNNTGG 2 cut(s) 117, 612
PkrI GCNGC 2 cut(s) 78, 470
PleI GAGTC 1 cut(s) 169
PpsI GAGTC 1 cut(s) 169
PpuMI RGGWCCY 1 cut(s) 239
PscI ACATGT 1 cut(s) 511
Psp1406I AACGTT 1 cut(s) 70
Psp5II RGGWCCY 1 cut(s) 239
PspN4I GGNNCC 2 cut(s) 241, 635
PspPI GGNCC 3 cut(s) 239, 505, 634
PspPPI RGGWCCY 1 cut(s) 239
PsrI GAACNNNNNNTAC 2 cut(s) 327, 359
RsaI GTAC 2 cut(s) 125, 222
RsaNI GTAC 2 cut(s) 124, 221
SapI GCTCTTC 1 cut(s) 470
SaqAI TTAA 1 cut(s) 81
SatI GCNGC 2 cut(s) 77, 469
Sau3AI GATC 3 cut(s) 214, 295, 484
Sau96I GGNCC 3 cut(s) 239, 505, 634
SchI GAGTC 1 cut(s) 169
SfaNI GCATC 1 cut(s) 589
SfcI CTRYAG 1 cut(s) 193
SinI GGWCC 1 cut(s) 239
SmlI CTYRAG 3 cut(s) 80, 548, 590
SmoI CTYRAG 3 cut(s) 80, 548, 590
Sse9I AATT 2 cut(s) 352, 560
SsiI CCGC 1 cut(s) 77
SspI AATATT 1 cut(s) 208
SspMI CTAG 2 cut(s) 278, 285
TaaI ACNGT 1 cut(s) 167
TaiI ACGT 2 cut(s) 73, 369
TaqI TCGA 4 cut(s) 173, 255, 298, 333
TasI AATT 2 cut(s) 352, 560
TatI WGTACW 1 cut(s) 220
TauI GCSGC 1 cut(s) 79
Tru1I TTAA 1 cut(s) 81
Tru9I TTAA 1 cut(s) 81
TseI GCWGC 1 cut(s) 468
TspDTI ATGAA 2 cut(s) 146, 401
TspGWI ACGGA 1 cut(s) 369
Van91I CCANNNNNTGG 2 cut(s) 117, 612
Vha464I CTTAAG 1 cut(s) 80
VpaK11BI GGWCC 1 cut(s) 239
XceI RCATGY 1 cut(s) 515
XmiI GTMKAC 1 cut(s) 369
XmnI GAANNNNTTC 1 cut(s) 138
XspI CTAG 2 cut(s) 278, 285
ZraI GACGTC 1 cut(s) 367
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.