Rorug04G0176100

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000103
Physical Location & Seq
Reverse (-)
31006082 .. 31007200
1119 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0176100.1

Sequence Viewer

Length: 1119 bp
ATGCCGGAGAGGGACATGCCTTCGTGGAATACGATGGTTACTGGCTTTATTCAGAATGGGGATTTAAAGCGGGCGTGGGACTTGTTTATTCAAATGCCACAGAAGAATGTCATATCATGGACTACAATGATCACTGGGTATGTACAAGATGGGAGAAATGAAGATGCATTGATGATCTTTTCGAAAATGGTGGCTGATAATGGGGTGAGACCTAATCAGGGAACTTTTGTCAGTATCTTGAGTGCTTGTAGTAACTTAGCTGGTCTTTGTGAGGGACGTCAAATACATCAGATGATAACTAAAACAGTTTATCAGGAATGTGTACATTTGGTGTCTGCACTCATAAACATGTATTCAAAATGTGGTGAGTTAGTCTCTGCTAGGAAGATGTTTGAAGATGGATCGACAATCCATAGGGATTTTATCTCCTGGAATGGAATGATTGCAGCCTATGCACATCATGGATGTGGTATTGAGGCAATTAACTTTTATAATGAAATGCGGCAATTGGGGTGCAAACCTGATGATGTTACTTATGTGGGGCTTCTTTCTGCATGCAGCCATGCTGGTTTGGTGGAGGAGGGACTAAATCTTTTTGATGAGCTTCTTAGAGATGGGTCAATACAAGTGAGGGAAGATCACTACACTTGCTTAGTTGATCTTTGTGGTCGAGCAGGGAGGCTGAAGGAGGCTGTTGATGATATCCTCGAGAAGCTTGGGACCAACCCATCAGCATCTAATTGGGGGGCTCTTCTTGCTGGATGTATCGATCATCGTAACATGGATACTGGGAAGCTAGCTGCAGAGAAGCTTTTAAATGAGGGGCCAGATGATGCAGGAAGTTACTCGTTGTTGTGGAACTTTTATGCTAGATCTGGTAATTGGAGAGAAGCTGCAAAGATGAGGATTAAAATGAAAGAGAAGGGGTTGAAAAAGCAGCCTGGTTGCAGTTGGATAGAAGTTGGAAATATGGTGCATGTGTTTGTGGTCAGTGACAAGTCTCATTGCCAATCGCAACTTATATATTCTGCACTTAACGATTTACATAAACAAATGAAGAAGATTGGCTACATACCAAACAATGATTTGAATGTAGATGAAGATTTTTCAGTTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

372

Amino Acids

41.6

Weight (kDa)

5.78

Isoelectric Point (pI)

31.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 7 - 37 3.4e-06 PPR repeat family
PPR PF01535 8 - 37 6.4e-06 PPR repeat
PPR_2 PF13041 35 - 84 1.1e-10 PPR repeat family
PPR_3 PF13812 35 - 84 2.1e-06 Pentatricopeptide repeat domain
PPR PF01535 38 - 65 1.5e-06 PPR repeat
PPR_2 PF13041 140 - 187 6.2e-12 PPR repeat family
PPR PF01535 142 - 172 4.3e-07 PPR repeat
E_motif PF20431 258 - 320 2.7e-18 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 492
AatII GACGTC 1 cut(s) 280
AciI CCGC 2 cut(s) 70, 502
AclWI GGATC 1 cut(s) 409
AcuI CTGAAG 1 cut(s) 704
AcyI GRCGYC 1 cut(s) 277
AfaI GTAC 2 cut(s) 144, 324
AfiI CCNNNNNNNGG 1 cut(s) 218
AflIII ACRYGT 1 cut(s) 348
AgsI TTSAA 5 cut(s) 92, 357, 395, 931, 1090
AjnI CCWGG 2 cut(s) 428, 940
AluBI AGCT 7 cut(s) 260, 604, 715, 796, 800, 811, 893
AluI AGCT 7 cut(s) 260, 604, 715, 796, 800, 811, 893
Alw26I GTCTC 3 cut(s) 202, 379, 1005
AlwI GGATC 1 cut(s) 409
Ama87I CYCGRG 1 cut(s) 707
AoxI GGCC 1 cut(s) 824
ApeKI GCWGC 5 cut(s) 446, 558, 800, 893, 937
AspS9I GGNCC 2 cut(s) 720, 824
AsuHPI GGTGA 2 cut(s) 217, 377
AsuII TTCGAA 1 cut(s) 182
AsuNHI GCTAGC 1 cut(s) 796
AvaI CYCGRG 1 cut(s) 707
AvaII GGWCC 1 cut(s) 720
BanII GRGCYC 1 cut(s) 751
BarI GAAGNNNNNNTAC 2 cut(s) 1052, 1084
BbvI GCAGC 5 cut(s) 458, 570, 787, 880, 949
BccI CCATC 5 cut(s) 28, 143, 392, 608, 736
BciT130I CCWGG 2 cut(s) 430, 942
BciVI GTATCC 1 cut(s) 778
BclI TGATCA 1 cut(s) 129
BcoDI GTCTC 3 cut(s) 202, 379, 1005
BfaI CTAG 3 cut(s) 381, 797, 870
BfmI CTRYAG 1 cut(s) 801
BfuI GTATCC 1 cut(s) 778
BglII AGATCT 1 cut(s) 872
BisI GCNGC 6 cut(s) 447, 503, 559, 801, 894, 938
BlsI GCNGC 6 cut(s) 448, 504, 560, 802, 895, 939
Bme1390I CCNGG 2 cut(s) 430, 942
Bme18I GGWCC 1 cut(s) 720
BmeT110I CYCGRG 1 cut(s) 707
BmgT120I GGNCC 2 cut(s) 720, 824
BmiI GGNNCC 2 cut(s) 721, 825
BmrFI CCNGG 2 cut(s) 430, 942
BmrI ACTGGG 2 cut(s) 144, 798
BmsI GCATC 3 cut(s) 154, 743, 823
BmtI GCTAGC 1 cut(s) 800
BmuI ACTGGG 2 cut(s) 144, 798
BplI GAGNNNNNCTC 2 cut(s) 359, 391
Bpu14I TTCGAA 1 cut(s) 182
BpuEI CTTGAG 1 cut(s) 259
Bsa29I ATCGAT 1 cut(s) 768
BsaHI GRCGYC 1 cut(s) 277
BsaI GGTCTC 1 cut(s) 202
Bsc4I CCNNNNNNNGG 1 cut(s) 218
Bse1I ACTGG 3 cut(s) 46, 139, 793
Bse3DI GCAATG 1 cut(s) 1003
BseBI CCWGG 2 cut(s) 430, 942
BseCI ATCGAT 1 cut(s) 768
BseGI GGATG 2 cut(s) 470, 767
BseLI CCNNNNNNNGG 1 cut(s) 218
BseMI GCAATG 1 cut(s) 1003
BseNI ACTGG 3 cut(s) 46, 139, 793
BseRI GAGGAG 1 cut(s) 593
BseXI GCAGC 5 cut(s) 458, 570, 787, 880, 949
BsgI GTGCAG 2 cut(s) 321, 1014
BshFI GGCC 1 cut(s) 826
BshVI ATCGAT 1 cut(s) 768
BsiHKCI CYCGRG 1 cut(s) 707
BsiSI CCGG 1 cut(s) 5
BslFI GGGAC 5 cut(s) 26, 92, 288, 597, 733
BslI CCNNNNNNNGG 1 cut(s) 218
BsmAI GTCTC 3 cut(s) 202, 379, 1005
BsmFI GGGAC 5 cut(s) 26, 92, 288, 597, 733
BsnI GGCC 1 cut(s) 826
Bso31I GGTCTC 1 cut(s) 202
BsoBI CYCGRG 1 cut(s) 707
Bsp119I TTCGAA 1 cut(s) 182
Bsp1286I GDGCHC 1 cut(s) 751
Bsp1407I TGTACA 2 cut(s) 142, 322
Bsp143I GATC 7 cut(s) 129, 174, 401, 637, 658, 769, 872
BspACI CCGC 2 cut(s) 70, 502
BspANI GGCC 1 cut(s) 826
BspDI ATCGAT 1 cut(s) 768
BspLI GGNNCC 2 cut(s) 721, 825
BspMAI CTGCAG 1 cut(s) 805
BspOI GCTAGC 1 cut(s) 800
BspPI GGATC 1 cut(s) 409
BspQI GCTCTTC 1 cut(s) 756
BspT104I TTCGAA 1 cut(s) 182
BspTNI GGTCTC 1 cut(s) 202
BsrDI GCAATG 1 cut(s) 1003
BsrGI TGTACA 2 cut(s) 142, 322
BsrI ACTGG 3 cut(s) 46, 139, 793
BssMI GATC 7 cut(s) 129, 174, 401, 637, 658, 769, 872
BssNI GRCGYC 1 cut(s) 277
Bst2UI CCWGG 2 cut(s) 430, 942
Bst4CI ACNGT 1 cut(s) 307
Bst6I CTCTTC 1 cut(s) 756
BstACI GRCGYC 1 cut(s) 277
BstAPI GCANNNNNTGC 1 cut(s) 452
BstAUI TGTACA 2 cut(s) 142, 322
BstBI TTCGAA 1 cut(s) 182
BstC8I GCNNGC 3 cut(s) 72, 556, 798
BstDEI CTNAG 3 cut(s) 256, 608, 652
BstF5I GGATG 2 cut(s) 470, 767
BstKTI GATC 7 cut(s) 132, 177, 404, 640, 661, 772, 875
BstMAI GTCTC 3 cut(s) 202, 379, 1005
BstMBI GATC 7 cut(s) 129, 174, 401, 637, 658, 769, 872
BstMWI GCNNNNNNNGC 2 cut(s) 452, 755
BstNI CCWGG 2 cut(s) 430, 942
BstNSI RCATGY 4 cut(s) 19, 352, 558, 980
BstSCI CCNGG 2 cut(s) 428, 940
BstSFI CTRYAG 1 cut(s) 801
BstV1I GCAGC 5 cut(s) 458, 570, 787, 880, 949
BstX2I RGATCY 1 cut(s) 872
BstYI RGATCY 1 cut(s) 872
Bsu15I ATCGAT 1 cut(s) 768
BsuI GTATCC 1 cut(s) 778
BsuRI GGCC 1 cut(s) 826
BsuTUI ATCGAT 1 cut(s) 768
BtsCI GGATG 2 cut(s) 470, 767
BtsIMutI CAGTG 2 cut(s) 132, 997
Cac8I GCNNGC 3 cut(s) 72, 556, 798
Cfr13I GGNCC 2 cut(s) 720, 824
ClaI ATCGAT 1 cut(s) 768
Csp6I GTAC 2 cut(s) 143, 323
CviAII CATG 8 cut(s) 16, 117, 349, 461, 555, 563, 781, 977
CviQI GTAC 2 cut(s) 143, 323
DdeI CTNAG 3 cut(s) 256, 608, 652
DpnI GATC 7 cut(s) 131, 176, 403, 639, 660, 771, 874
DpnII GATC 7 cut(s) 129, 174, 401, 637, 658, 769, 872
DraI TTTAAA 2 cut(s) 66, 816
Eam1104I CTCTTC 1 cut(s) 756
EarI CTCTTC 1 cut(s) 756
Eco24I GRGCYC 1 cut(s) 751
Eco31I GGTCTC 1 cut(s) 202
Eco32I GATATC 1 cut(s) 703
Eco47I GGWCC 1 cut(s) 720
Eco57I CTGAAG 1 cut(s) 704
Eco88I CYCGRG 1 cut(s) 707
EcoRII CCWGG 2 cut(s) 428, 940
EcoRV GATATC 1 cut(s) 703
EcoT22I ATGCAT 1 cut(s) 169
EcoT38I GRGCYC 1 cut(s) 751
FaeI CATG 8 cut(s) 19, 120, 352, 464, 558, 566, 784, 980
FaqI GGGAC 5 cut(s) 26, 92, 288, 597, 733
FatI CATG 8 cut(s) 15, 116, 348, 460, 554, 562, 780, 976
FauI CCCGC 1 cut(s) 63
FbaI TGATCA 1 cut(s) 129
Fnu4HI GCNGC 6 cut(s) 447, 503, 559, 801, 894, 938
FokI GGATG 2 cut(s) 477, 774
FriOI GRGCYC 1 cut(s) 751
Fsp4HI GCNGC 6 cut(s) 447, 503, 559, 801, 894, 938
FspBI CTAG 3 cut(s) 381, 797, 870
GluI GCNGC 6 cut(s) 447, 503, 559, 801, 894, 938
HaeIII GGCC 1 cut(s) 826
HapII CCGG 1 cut(s) 5
Hin1I GRCGYC 1 cut(s) 277
Hin1II CATG 8 cut(s) 19, 120, 352, 464, 558, 566, 784, 980
HindIII AAGCTT 2 cut(s) 713, 809
HpaII CCGG 1 cut(s) 5
HphI GGTGA 2 cut(s) 217, 377
Hpy166II GTNNAC 1 cut(s) 323
Hpy188I TCNGA 2 cut(s) 54, 291
Hpy188III TCNNGA 3 cut(s) 238, 314, 709
Hpy8I GTNNAC 1 cut(s) 323
HpyAV CCTTC 3 cut(s) 30, 679, 916
HpyCH4III ACNGT 1 cut(s) 307
HpyCH4IV ACGT 1 cut(s) 277
HpyF10VI GCNNNNNNNGC 2 cut(s) 452, 755
HpyF3I CTNAG 3 cut(s) 256, 608, 652
HpySE526I ACGT 1 cut(s) 277
Hsp92I GRCGYC 1 cut(s) 277
Hsp92II CATG 8 cut(s) 19, 120, 352, 464, 558, 566, 784, 980
Ksp22I TGATCA 1 cut(s) 129
Kzo9I GATC 7 cut(s) 129, 174, 401, 637, 658, 769, 872
LguI GCTCTTC 1 cut(s) 756
Lsp1109I GCAGC 5 cut(s) 458, 570, 787, 880, 949
LweI GCATC 3 cut(s) 154, 743, 823
MaeI CTAG 3 cut(s) 381, 797, 870
MaeII ACGT 1 cut(s) 277
MaeIII GTNAC 7 cut(s) 37, 251, 529, 776, 842, 992, 1111
MalI GATC 7 cut(s) 131, 176, 403, 639, 660, 771, 874
MboI GATC 7 cut(s) 129, 174, 401, 637, 658, 769, 872
MboII GAAGA 9 cut(s) 115, 173, 397, 407, 647, 743, 1069, 1072, 1112
MfeI CAATTG 1 cut(s) 506
MflI RGATCY 1 cut(s) 872
MhlI GDGCHC 1 cut(s) 751
MluCI AATT 4 cut(s) 480, 506, 739, 880
MmeI TCCRAC 2 cut(s) 932, 943
Mph1103I ATGCAT 1 cut(s) 169
MseI TTAA 5 cut(s) 65, 483, 815, 909, 1035
MslI CAYNNNNRTG 2 cut(s) 347, 465
MspI CCGG 1 cut(s) 5
MspR9I CCNGG 2 cut(s) 430, 942
MunI CAATTG 1 cut(s) 506
MvaI CCWGG 2 cut(s) 430, 942
MwoI GCNNNNNNNGC 2 cut(s) 452, 755
NdeII GATC 7 cut(s) 129, 174, 401, 637, 658, 769, 872
NheI GCTAGC 1 cut(s) 796
NlaIII CATG 8 cut(s) 19, 120, 352, 464, 558, 566, 784, 980
NlaIV GGNNCC 2 cut(s) 721, 825
NmuCI GTSAC 1 cut(s) 992
NsiI ATGCAT 1 cut(s) 169
NspI RCATGY 4 cut(s) 19, 352, 558, 980
NspV TTCGAA 1 cut(s) 182
PaeI GCATGC 1 cut(s) 558
PaeR7I CTCGAG 1 cut(s) 707
PciI ACATGT 1 cut(s) 348
PciSI GCTCTTC 1 cut(s) 756
PcsI WCGNNNNNNNCGW 1 cut(s) 29
PfoI TCCNGGA 1 cut(s) 428
PkrI GCNGC 6 cut(s) 448, 504, 560, 802, 895, 939
PscI ACATGT 1 cut(s) 348
PsiI TTATAA 1 cut(s) 492
Psp6I CCWGG 2 cut(s) 428, 940
PspGI CCWGG 2 cut(s) 428, 940
PspN4I GGNNCC 2 cut(s) 721, 825
PspPI GGNCC 2 cut(s) 720, 824
PstI CTGCAG 1 cut(s) 805
PsuI RGATCY 1 cut(s) 872
RsaI GTAC 2 cut(s) 144, 324
RsaNI GTAC 2 cut(s) 143, 323
RseI CAYNNNNRTG 2 cut(s) 347, 465
SapI GCTCTTC 1 cut(s) 756
SaqAI TTAA 5 cut(s) 65, 483, 815, 909, 1035
SatI GCNGC 6 cut(s) 447, 503, 559, 801, 894, 938
Sau3AI GATC 7 cut(s) 129, 174, 401, 637, 658, 769, 872
Sau96I GGNCC 2 cut(s) 720, 824
ScrFI CCNGG 2 cut(s) 430, 942
SduI GDGCHC 1 cut(s) 751
SfaNI GCATC 3 cut(s) 154, 743, 823
SfcI CTRYAG 1 cut(s) 801
Sfr274I CTCGAG 1 cut(s) 707
SfuI TTCGAA 1 cut(s) 182
SinI GGWCC 1 cut(s) 720
SlaI CTCGAG 1 cut(s) 707
SmiMI CAYNNNNRTG 2 cut(s) 347, 465
SmlI CTYRAG 2 cut(s) 238, 707
SmoI CTYRAG 2 cut(s) 238, 707
SphI GCATGC 1 cut(s) 558
Sse9I AATT 4 cut(s) 480, 506, 739, 880
SsiI CCGC 2 cut(s) 70, 502
SspMI CTAG 3 cut(s) 381, 797, 870
StyD4I CCNGG 2 cut(s) 428, 940
TaaI ACNGT 1 cut(s) 307
TaiI ACGT 1 cut(s) 280
TaqI TCGA 5 cut(s) 182, 404, 670, 708, 768
TasI AATT 4 cut(s) 480, 506, 739, 880
TatI WGTACW 2 cut(s) 142, 322
TauI GCSGC 1 cut(s) 505
Tru1I TTAA 5 cut(s) 65, 483, 815, 909, 1035
Tru9I TTAA 5 cut(s) 65, 483, 815, 909, 1035
TscAI CASTG 2 cut(s) 139, 997
TseFI GTSAC 1 cut(s) 992
TseI GCWGC 5 cut(s) 446, 558, 800, 893, 937
Tsp45I GTSAC 1 cut(s) 992
TspDTI ATGAA 5 cut(s) 174, 510, 929, 1070, 1113
TspRI CASTG 2 cut(s) 139, 997
VpaK11BI GGWCC 1 cut(s) 720
XceI RCATGY 4 cut(s) 19, 352, 558, 980
XhoI CTCGAG 1 cut(s) 707
XspI CTAG 3 cut(s) 381, 797, 870
ZraI GACGTC 1 cut(s) 278
Zsp2I ATGCAT 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.