Rroxscaffold_7G00212920

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000103
Physical Location & Seq
Forward (+)
63458173 .. 63462889
4717 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00212920.1

Sequence Viewer

Length: 1527 bp
ATGAGTTTCTGCGAGCCGAATCTAAACGGCTCAAGTTCAATATATGGTGTTAATGGGAGATACAGTTATGTTGCGTACAAAAGTTTTGTTGACTTCAATAGCCACGCCGCATGGAATTTACAAACACCCAAAATACAACCCCAATATGGTTGCAGTTTTGACAAGGAGGTTGATTTTGCTCTAGATGGTAAGCCCAAATTTGATCTCGACATTGAGCCTATTGATGATATATATGAAGAAGACGAGCCAATTCATGGCTTTGATCTACTCGGAGGGCTAAAGCACCATCAAGAGGTTGATTATTTAAGTGAGGATGTTGGACACTTTGACATGGTTGTCGGATGCAGTGAGGACAAGTGTTTTTCGAGCAGGTGGAGGGACAAATGGGCTATGCTTTCAGGTCTTGTATTTGATGAGAAGTGTTTCTCAACTGAAAACTGTGCAAGCTTTGTGAACATTGTTTATCATGTACTCTTAAGTCACATTGTCCCAATAGAGAAGTTTGTGCTTTCTCACACACATCTTATACCTACTAAAGATATTGATCGATGGGTTCTTCATCTTTCAAGAAACTCTCTTAAAGTTTTCGAACTTCATATTCCTTATTGGCCTAAATACAAGATGCCCATATGTTTCTTTTCTTATCAAGATATGATTGAGCTGAAGTTATTTAACTGCTTGCTGAAACCTCCAACCACATTCAAAGGCTTCAGAACTTTGAAGAGAGTTATTTTTCAGTATGTTACCTTGGCCCAAGATGTGTTGGAAAATCTGATTATTCCTATGCTGGAGAGTTTGGAAGTGATAAACTGTGATGGCTTTACACATCTCAAGATTGATGCACCAAATCTTCGATTCCTTTCTTTTGTTGGTGGCTTGAAGGATGTTAGTATTCAGAATACCTTAAATCTTGCTGTTGTTCAATTTTATTTGACGGAACTTTATGACGGACAAGATCGTGTCAGTTCTTCCAATTTGGCAAAATTTTTCATTGACCTGCCTCATATTCAGTGGCTCAAAATTGATGGTTTTGCTGTACAGTATTTGGCTGTTGGTGACTTGCCTGGAAGGCTCCCCAAACCATGTCTAGAACTAAATTTTCTTTCTCTCCTCGTATACTTTAATGATCTTGCGGAAATTTTAACTACTCTGTATCTTCTGGGAAGCTCCCCTGTTCTGGAAGTACTACATGTTACGGTGAGGTTTACTCTGTTGATGTATGCAGTATTTGGTTATGTTCACCATGAAGAACAGGTCATTGCTGTTGATGAAGAGGCAAACTCTTGGTTGGATAACCTAGATGACGACATGAATTGGTCATTCCCCAAACTGCGACTTGTTCAATTAACCGACTTTTCTGGTTGCAAAGCTCAACAAGATTTCATCAAATTTTTGCTTCTAAATTCACCCGGGCTTGAGACGATGACTATTAGGGCTTTTTCTGCCGATGGTACTTCAGAAGTTTTAAAGAAGTTGCTCCAGTTAAGGCGTACCTCAAGTGCAGAGATCATATACTTGGATCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

508

Amino Acids

58.31

Weight (kDa)

5.07

Isoelectric Point (pI)

37.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 177 - 317 2.7e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 181 - 397 6.3e-07 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 360
AasI GACNNNNNNGTC 1 cut(s) 335
Acc36I ACCTGC 2 cut(s) 360, 1005
AccB7I CCANNNNNTGG 1 cut(s) 254
AccI GTMKAC 1 cut(s) 1116
AciI CCGC 2 cut(s) 108, 1133
AclWI GGATC 1 cut(s) 1514
AcsI RAATTY 7 cut(s) 115, 197, 983, 1096, 1137, 1388, 1402
AcuI CTGAAG 3 cut(s) 683, 694, 1440
AfaI GTAC 6 cut(s) 77, 471, 1038, 1185, 1453, 1492
AfiI CCNNNNNNNGG 4 cut(s) 146, 254, 292, 1177
AflII CTTAAG 1 cut(s) 475
AflIII ACRYGT 1 cut(s) 1189
AgsI TTSAA 8 cut(s) 39, 97, 567, 703, 721, 880, 923, 1343
AjnI CCWGG 1 cut(s) 1063
AluBI AGCT 4 cut(s) 447, 661, 1167, 1370
AluI AGCT 4 cut(s) 447, 661, 1167, 1370
Alw26I GTCTC 1 cut(s) 1412
AlwI GGATC 1 cut(s) 1514
Ama87I CYCGRG 1 cut(s) 1409
AoxI GGCC 2 cut(s) 608, 750
ApoI RAATTY 7 cut(s) 115, 197, 983, 1096, 1137, 1388, 1402
Asp700I GAANNNNTTC 1 cut(s) 422
AspS9I GGNCC 1 cut(s) 751
AsuC2I CCSGG 2 cut(s) 1410, 1411
AsuHPI GGTGA 4 cut(s) 1067, 1210, 1232, 1398
AsuII TTCGAA 1 cut(s) 588
AvaI CYCGRG 1 cut(s) 1409
BamHI GGATCC 1 cut(s) 1519
BbsI GAAGAC 1 cut(s) 246
BccI CCATC 6 cut(s) 179, 294, 543, 809, 1019, 1442
BceAI ACGGC 1 cut(s) 43
BciT130I CCWGG 1 cut(s) 1065
BcnI CCSGG 2 cut(s) 1410, 1411
BcoDI GTCTC 1 cut(s) 1412
BfaI CTAG 3 cut(s) 182, 1088, 1298
BfrI CTTAAG 1 cut(s) 475
BfuAI ACCTGC 2 cut(s) 360, 1005
BglI GCCNNNNNGGC 1 cut(s) 1069
BisI GCNGC 1 cut(s) 108
BlsI GCNGC 1 cut(s) 109
BmcAI AGTACT 1 cut(s) 1185
Bme1390I CCNGG 3 cut(s) 1065, 1410, 1411
BmeT110I CYCGRG 1 cut(s) 1409
BmgT120I GGNCC 1 cut(s) 751
BmiI GGNNCC 2 cut(s) 1073, 1521
BmrFI CCNGG 3 cut(s) 1065, 1410, 1411
BmsI GCATC 3 cut(s) 332, 612, 829
BpiI GAAGAC 1 cut(s) 246
BplI GAGNNNNNCTC 4 cut(s) 1192, 1224, 1265, 1297
BpmI CTGGAG 2 cut(s) 809, 1463
Bpu14I TTCGAA 1 cut(s) 588
BpuEI CTTGAG 4 cut(s) 16, 815, 1436, 1480
BpuMI CCSGG 2 cut(s) 1410, 1411
Bsa29I ATCGAT 1 cut(s) 547
BsaBI GATNNNNATC 1 cut(s) 543
BsaJI CCNNGG 2 cut(s) 747, 1409
BsaXI ACNNNNNCTCC 2 cut(s) 49, 79
Bsc4I CCNNNNNNNGG 4 cut(s) 146, 254, 292, 1177
Bse1I ACTGG 1 cut(s) 1480
Bse3DI GCAATG 1 cut(s) 1257
Bse8I GATNNNNATC 1 cut(s) 543
BseBI CCWGG 1 cut(s) 1065
BseCI ATCGAT 1 cut(s) 547
BseDI CCNNGG 2 cut(s) 747, 1409
BseGI GGATG 3 cut(s) 319, 347, 889
BseJI GATNNNNATC 1 cut(s) 543
BseLI CCNNNNNNNGG 4 cut(s) 146, 254, 292, 1177
BseMI GCAATG 1 cut(s) 1257
BseNI ACTGG 1 cut(s) 1480
BseRI GAGGAG 1 cut(s) 1100
BsgI GTGCAG 1 cut(s) 1521
BshFI GGCC 2 cut(s) 610, 752
BshVI ATCGAT 1 cut(s) 547
BsiHKCI CYCGRG 1 cut(s) 1409
BsiSI CCGG 1 cut(s) 1410
BslFI GGGAC 2 cut(s) 392, 473
BslI CCNNNNNNNGG 4 cut(s) 146, 254, 292, 1177
BsmAI GTCTC 1 cut(s) 1412
BsmBI CGTCTC 1 cut(s) 1412
BsmFI GGGAC 2 cut(s) 392, 473
BsnI GGCC 2 cut(s) 610, 752
BsoBI CYCGRG 1 cut(s) 1409
Bsp119I TTCGAA 1 cut(s) 588
Bsp1407I TGTACA 1 cut(s) 1036
Bsp143I GATC 7 cut(s) 202, 262, 544, 955, 1126, 1506, 1519
BspACI CCGC 2 cut(s) 108, 1133
BspANI GGCC 2 cut(s) 610, 752
BspDI ATCGAT 1 cut(s) 547
BspLI GGNNCC 2 cut(s) 1073, 1521
BspMI ACCTGC 2 cut(s) 360, 1005
BspPI GGATC 1 cut(s) 1514
BspT104I TTCGAA 1 cut(s) 588
BspTI CTTAAG 1 cut(s) 475
BsrDI GCAATG 1 cut(s) 1257
BsrGI TGTACA 1 cut(s) 1036
BsrI ACTGG 1 cut(s) 1480
BssECI CCNNGG 2 cut(s) 747, 1409
BssMI GATC 7 cut(s) 202, 262, 544, 955, 1126, 1506, 1519
BssNAI GTATAC 1 cut(s) 1117
BssT1I CCWWGG 1 cut(s) 747
Bst1107I GTATAC 1 cut(s) 1117
Bst2UI CCWGG 1 cut(s) 1065
Bst4CI ACNGT 5 cut(s) 65, 440, 812, 1041, 1198
Bst6I CTCTTC 2 cut(s) 716, 1266
BstAFI CTTAAG 1 cut(s) 475
BstAUI TGTACA 1 cut(s) 1036
BstBI TTCGAA 1 cut(s) 588
BstC8I GCNNGC 3 cut(s) 14, 445, 680
BstF5I GGATG 3 cut(s) 319, 347, 889
BstKTI GATC 7 cut(s) 205, 265, 547, 958, 1129, 1509, 1522
BstMAI GTCTC 1 cut(s) 1412
BstMBI GATC 7 cut(s) 202, 262, 544, 955, 1126, 1506, 1519
BstMWI GCNNNNNNNGC 2 cut(s) 1069, 1442
BstNI CCWGG 1 cut(s) 1065
BstNSI RCATGY 1 cut(s) 1193
BstSCI CCNGG 3 cut(s) 1063, 1408, 1409
BstV2I GAAGAC 1 cut(s) 246
BstX2I RGATCY 1 cut(s) 1519
BstYI RGATCY 1 cut(s) 1519
BstZ17I GTATAC 1 cut(s) 1117
Bsu15I ATCGAT 1 cut(s) 547
BsuRI GGCC 2 cut(s) 610, 752
BsuTUI ATCGAT 1 cut(s) 547
BtsCI GGATG 3 cut(s) 319, 347, 889
BtsI GCAGTG 1 cut(s) 352
BtsIMutI CAGTG 2 cut(s) 352, 1016
BveI ACCTGC 2 cut(s) 360, 1005
Cac8I GCNNGC 3 cut(s) 14, 445, 680
Cfr13I GGNCC 1 cut(s) 751
Cfr9I CCCGGG 1 cut(s) 1409
ClaI ATCGAT 1 cut(s) 547
Csp6I GTAC 6 cut(s) 76, 470, 1037, 1184, 1452, 1491
CviAII CATG 8 cut(s) 111, 254, 331, 467, 1083, 1190, 1244, 1309
CviQI GTAC 6 cut(s) 76, 470, 1037, 1184, 1452, 1491
DpnI GATC 7 cut(s) 204, 264, 546, 957, 1128, 1508, 1521
DpnII GATC 7 cut(s) 202, 262, 544, 955, 1126, 1506, 1519
DraI TTTAAA 1 cut(s) 1467
DrdI GACNNNNNNGTC 1 cut(s) 335
DseDI GACNNNNNNGTC 1 cut(s) 335
Eam1104I CTCTTC 2 cut(s) 716, 1266
EarI CTCTTC 2 cut(s) 716, 1266
Eco130I CCWWGG 1 cut(s) 747
Eco57I CTGAAG 3 cut(s) 683, 694, 1440
Eco88I CYCGRG 1 cut(s) 1409
EcoRII CCWGG 1 cut(s) 1063
EcoT14I CCWWGG 1 cut(s) 747
ErhI CCWWGG 1 cut(s) 747
Esp3I CGTCTC 1 cut(s) 1412
FaeI CATG 8 cut(s) 114, 257, 334, 470, 1086, 1193, 1247, 1312
FaqI GGGAC 2 cut(s) 392, 473
FatI CATG 8 cut(s) 110, 253, 330, 466, 1082, 1189, 1243, 1308
FauNDI CATATG 1 cut(s) 629
FblI GTMKAC 1 cut(s) 1116
Fnu4HI GCNGC 1 cut(s) 108
FokI GGATG 3 cut(s) 326, 354, 896
Fsp4HI GCNGC 1 cut(s) 108
FspBI CTAG 3 cut(s) 182, 1088, 1298
GluI GCNGC 1 cut(s) 108
GsuI CTGGAG 2 cut(s) 809, 1463
HaeIII GGCC 2 cut(s) 610, 752
HapII CCGG 1 cut(s) 1410
Hin1II CATG 8 cut(s) 114, 257, 334, 470, 1086, 1193, 1247, 1312
HincII GTYRAC 1 cut(s) 91
HindII GTYRAC 1 cut(s) 91
HindIII AAGCTT 1 cut(s) 445
HinfI GANTC 2 cut(s) 19, 855
HpaII CCGG 1 cut(s) 1410
HphI GGTGA 4 cut(s) 1067, 1210, 1232, 1398
Hpy166II GTNNAC 5 cut(s) 91, 454, 1117, 1206, 1240
Hpy188I TCNGA 6 cut(s) 272, 341, 713, 774, 897, 1459
Hpy188III TCNNGA 8 cut(s) 182, 206, 290, 567, 647, 832, 1088, 1178
Hpy8I GTNNAC 5 cut(s) 91, 454, 1117, 1206, 1240
HpyAV CCTTC 2 cut(s) 874, 1062
HpyCH4III ACNGT 5 cut(s) 65, 440, 812, 1041, 1198
HpyCH4V TGCA 7 cut(s) 153, 345, 443, 842, 1223, 1365, 1502
HpyF10VI GCNNNNNNNGC 2 cut(s) 1069, 1442
Hsp92II CATG 8 cut(s) 114, 257, 334, 470, 1086, 1193, 1247, 1312
Kzo9I GATC 7 cut(s) 202, 262, 544, 955, 1126, 1506, 1519
LmnI GCTCC 3 cut(s) 1077, 1172, 1482
LweI GCATC 3 cut(s) 332, 612, 829
MaeI CTAG 3 cut(s) 182, 1088, 1298
MaeIII GTNAC 4 cut(s) 479, 742, 1055, 1192
MalI GATC 7 cut(s) 204, 264, 546, 957, 1128, 1508, 1521
MboI GATC 7 cut(s) 202, 262, 544, 955, 1126, 1506, 1519
MboII GAAGA 9 cut(s) 248, 251, 548, 733, 842, 960, 1148, 1259, 1283
MflI RGATCY 1 cut(s) 1519
MmeI TCCRAC 5 cut(s) 298, 319, 716, 744, 1269
MroXI GAANNNNTTC 1 cut(s) 422
MspCI CTTAAG 1 cut(s) 475
MspI CCGG 1 cut(s) 1410
MspR9I CCNGG 3 cut(s) 1065, 1410, 1411
MvaI CCWGG 1 cut(s) 1065
MwoI GCNNNNNNNGC 2 cut(s) 1069, 1442
NciI CCSGG 2 cut(s) 1410, 1411
NdeI CATATG 1 cut(s) 629
NdeII GATC 7 cut(s) 202, 262, 544, 955, 1126, 1506, 1519
NlaIII CATG 8 cut(s) 114, 257, 334, 470, 1086, 1193, 1247, 1312
NlaIV GGNNCC 2 cut(s) 1073, 1521
NmuCI GTSAC 2 cut(s) 479, 1055
NspI RCATGY 1 cut(s) 1193
NspV TTCGAA 1 cut(s) 588
PaqCI CACCTGC 1 cut(s) 360
PciI ACATGT 1 cut(s) 1189
PdmI GAANNNNTTC 1 cut(s) 422
PfeI GAWTC 2 cut(s) 19, 855
PflMI CCANNNNNTGG 1 cut(s) 254
PkrI GCNGC 1 cut(s) 109
PscI ACATGT 1 cut(s) 1189
Psp6I CCWGG 1 cut(s) 1063
PspGI CCWGG 1 cut(s) 1063
PspN4I GGNNCC 2 cut(s) 1073, 1521
PspPI GGNCC 1 cut(s) 751
PsuI RGATCY 1 cut(s) 1519
RsaI GTAC 6 cut(s) 77, 471, 1038, 1185, 1453, 1492
RsaNI GTAC 6 cut(s) 76, 470, 1037, 1184, 1452, 1491
SatI GCNGC 1 cut(s) 108
Sau3AI GATC 7 cut(s) 202, 262, 544, 955, 1126, 1506, 1519
Sau96I GGNCC 1 cut(s) 751
ScaI AGTACT 1 cut(s) 1185
ScrFI CCNGG 3 cut(s) 1065, 1410, 1411
SfaNI GCATC 3 cut(s) 332, 612, 829
SfuI TTCGAA 1 cut(s) 588
SmaI CCCGGG 1 cut(s) 1411
SmlI CTYRAG 5 cut(s) 31, 475, 830, 1415, 1495
SmoI CTYRAG 5 cut(s) 31, 475, 830, 1415, 1495
SsiI CCGC 2 cut(s) 108, 1133
SspMI CTAG 3 cut(s) 182, 1088, 1298
StyD4I CCNGG 3 cut(s) 1063, 1408, 1409
StyI CCWWGG 1 cut(s) 747
TaaI ACNGT 5 cut(s) 65, 440, 812, 1041, 1198
TaqI TCGA 5 cut(s) 207, 365, 547, 588, 853
TatI WGTACW 3 cut(s) 469, 1036, 1183
TauI GCSGC 1 cut(s) 110
TfiI GAWTC 2 cut(s) 19, 855
TscAI CASTG 2 cut(s) 352, 1016
TseFI GTSAC 2 cut(s) 479, 1055
Tsp45I GTSAC 2 cut(s) 479, 1055
TspDTI ATGAA 9 cut(s) 242, 249, 548, 584, 979, 1260, 1284, 1325, 1372
TspGWI ACGGA 2 cut(s) 950, 963
TspMI CCCGGG 1 cut(s) 1409
TspRI CASTG 2 cut(s) 352, 1016
Van91I CCANNNNNTGG 1 cut(s) 254
Vha464I CTTAAG 1 cut(s) 475
XapI RAATTY 7 cut(s) 115, 197, 983, 1096, 1137, 1388, 1402
XbaI TCTAGA 2 cut(s) 181, 1087
XceI RCATGY 1 cut(s) 1193
XmaI CCCGGG 1 cut(s) 1409
XmiI GTMKAC 1 cut(s) 1116
XmnI GAANNNNTTC 1 cut(s) 422
XspI CTAG 3 cut(s) 182, 1088, 1298
ZrmI AGTACT 1 cut(s) 1185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.