Rroxscaffold_7G00201050

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000103
Physical Location & Seq
Forward (+)
48533071 .. 48535540
2470 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00201050.1

Sequence Viewer

Length: 1257 bp
ATGCCCGAAATGCCACCCAAGTGCCGTTTGAAAATGGAAATGGGGTTGGACAAATTTAGCAACTTACCGAGTGATGTTATAGAAAAGATATTGTTACTTTTGCCAATTAGGGATGCAGTGAGGACAAGTGTTTTATCTAACAAGTGGAGGTACCGATGGGCGAAGCTTCCACAGCTGGTGTTTGATGGTCAGTGTGTCTCGTCTCAAAACCACACATCTTTTGTGACCATTGTCAATCATGCACTCTTAGTTCACATTGGCCCCTTACATAGCTTCAAGCTTTCTCAACAAGGCTTTCTAGCCAGTAGAGATATCGATCGATGGATTGTCCATCTATCAAGACACTCTATCAAAGAGTTTAAACTTGAACTTCACGAGGGGCAGTGCTACAACATTCCTTCATGTTTGTTTTCTTGGCAAGATATGATTCATTTAAAGCTGAAGAATTGTTTTCTAAAACCTTTGCCCACATTCAAAGGCTTCAGGAGCTTGAAGAGACTTGATATTGTGCGCGTTACCTTGGCCCAAGATGTTCTTGAAAATCTTATTGTTTGTTGTCCTCTTCTCAAGACATTGACTTTCATAGACTGTGATGGTTTCACCCGTCTCAAGATTGATGCTCCAAAACTCCAATTCTTAGGCTTTAGGGGTCGTTTTGATGATGTTATTCTTGAAAACACCATAAATCTTGATGCTGTTACCATTTATCTGGAGGCTAATGTTGACCAAAAATGGGTTCCCCGTAGTTCTAGCAATCTGGTCTTGTTTTTCCTTCACCTGCCTCGTGTTCGAAGACTTGCAATCAGGAGTAACTTTTTAAAGTATTTGGCTGTTAGTGCCTTAACAAGAAAGGTGCCTAAACCATGTTTGCATCTGAAATTTCTTACTATAGAGATACACTTTAATGATCTGGAGGAGATTTTAACTGCTGTACGCCTTCTGAGAAGCTCCCCTGCTTTACAAGAACTAGAAATCGCAGCCTTCCCAAAGGATCAAGCTGTTGTGGGAGAAGTGAACTCTTGGTTAGATGACAACCTCATTTGGTCATTCACTAAACTGCGACTTGTGAAAATAACCAGCATCTCTGGTGCCAAAGCTGAATTAGATTTCATTAGATTTTTGCTTTTAAGTTCACCTGTGCTTGAGAGGATGACTATTAAGCCTGCTTCTGTCAATGGTTCTTCAGAACTGCTAAAAAAGTTGCTCCGGCTTGGGCGTGCCTCAGTGCATTCAGAGATAATCTACTTGGACCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

418

Amino Acids

47.97

Weight (kDa)

9.44

Isoelectric Point (pI)

42.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 19 - 56 1.2e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 101 - 387 2e-18 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 105 - 325 1.7e-18 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 786
Acc36I ACCTGC 1 cut(s) 786
Acc65I GGTACC 1 cut(s) 150
AccB1I GGYRCC 3 cut(s) 150, 853, 1088
AccII CGCG 1 cut(s) 513
AclWI GGATC 1 cut(s) 999
AcsI RAATTY 2 cut(s) 53, 878
AcuI CTGAAG 3 cut(s) 461, 466, 1167
AfaI GTAC 2 cut(s) 152, 933
AfiI CCNNNNNNNGG 1 cut(s) 733
AgsI TTSAA 7 cut(s) 31, 277, 368, 475, 493, 539, 674
AjuI GAANNNNNNNTTGG 2 cut(s) 720, 752
AleI CACNNNNGTG 1 cut(s) 19
AluBI AGCT 9 cut(s) 166, 175, 273, 280, 439, 489, 948, 998, 1097
AluI AGCT 9 cut(s) 166, 175, 273, 280, 439, 489, 948, 998, 1097
Alw26I GTCTC 4 cut(s) 202, 207, 490, 611
AlwI GGATC 1 cut(s) 999
AoxI GGCC 2 cut(s) 259, 522
ApeKI GCWGC 1 cut(s) 977
ApoI RAATTY 2 cut(s) 53, 878
Asp718I GGTACC 1 cut(s) 150
AspLEI GCGC 1 cut(s) 513
AspS9I GGNCC 3 cut(s) 260, 523, 1249
AsuHPI GGTGA 3 cut(s) 592, 767, 1125
AsuII TTCGAA 1 cut(s) 790
AvaII GGWCC 1 cut(s) 1249
BanI GGYRCC 3 cut(s) 150, 853, 1088
BauI CACGAG 2 cut(s) 374, 783
BbsI GAAGAC 1 cut(s) 799
BbvI GCAGC 1 cut(s) 989
BccI CCATC 5 cut(s) 150, 179, 315, 339, 587
BceAI ACGGC 1 cut(s) 9
BcoDI GTCTC 4 cut(s) 202, 207, 490, 611
BfaI CTAG 3 cut(s) 299, 750, 968
BfmI CTRYAG 1 cut(s) 888
BfuAI ACCTGC 1 cut(s) 786
BisI GCNGC 1 cut(s) 978
BlsI GCNGC 1 cut(s) 979
Bme18I GGWCC 1 cut(s) 1249
BmgT120I GGNCC 3 cut(s) 260, 523, 1249
BmiI GGNNCC 6 cut(s) 152, 262, 738, 855, 1090, 1251
BmsI GCATC 5 cut(s) 103, 607, 682, 880, 1089
BoxI GACNNNNGTC 1 cut(s) 230
BpiI GAAGAC 1 cut(s) 799
BpmI CTGGAG 2 cut(s) 731, 932
Bpu14I TTCGAA 1 cut(s) 790
BpuEI CTTGAG 3 cut(s) 551, 593, 1163
Bsa29I ATCGAT 2 cut(s) 315, 319
BsaBI GATNNNNATC 1 cut(s) 315
BsaJI CCNNGG 1 cut(s) 519
Bsc4I CCNNNNNNNGG 1 cut(s) 733
Bse1I ACTGG 1 cut(s) 303
Bse8I GATNNNNATC 1 cut(s) 315
BseCI ATCGAT 2 cut(s) 315, 319
BseDI CCNNGG 1 cut(s) 519
BseGI GGATG 2 cut(s) 118, 1155
BseJI GATNNNNATC 1 cut(s) 315
BseLI CCNNNNNNNGG 1 cut(s) 733
BseMII CTCAG 2 cut(s) 932, 1236
BseNI ACTGG 1 cut(s) 303
BseRI GAGGAG 1 cut(s) 929
BseXI GCAGC 1 cut(s) 989
Bsh1236I CGCG 1 cut(s) 513
Bsh1285I CGRYCG 1 cut(s) 319
BshFI GGCC 2 cut(s) 261, 524
BshNI GGYRCC 3 cut(s) 150, 853, 1088
BshVI ATCGAT 2 cut(s) 315, 319
BsiEI CGRYCG 1 cut(s) 319
BsiSI CCGG 1 cut(s) 1207
BslI CCNNNNNNNGG 1 cut(s) 733
BsmAI GTCTC 4 cut(s) 202, 207, 490, 611
BsmBI CGTCTC 2 cut(s) 207, 611
BsmI GAATGC 1 cut(s) 1228
BsnI GGCC 2 cut(s) 261, 524
Bsp119I TTCGAA 1 cut(s) 790
Bsp143I GATC 3 cut(s) 316, 907, 991
BspANI GGCC 2 cut(s) 261, 524
BspCNI CTCAG 2 cut(s) 933, 1235
BspDI ATCGAT 2 cut(s) 315, 319
BspFNI CGCG 1 cut(s) 513
BspLI GGNNCC 6 cut(s) 152, 262, 738, 855, 1090, 1251
BspMI ACCTGC 1 cut(s) 786
BspPI GGATC 1 cut(s) 999
BspT104I TTCGAA 1 cut(s) 790
BspT107I GGYRCC 3 cut(s) 150, 853, 1088
BsrI ACTGG 1 cut(s) 303
BssECI CCNNGG 1 cut(s) 519
BssMI GATC 3 cut(s) 316, 907, 991
BssSI CACGAG 2 cut(s) 374, 783
BssT1I CCWWGG 1 cut(s) 519
Bst2BI CACGAG 2 cut(s) 374, 783
Bst4CI ACNGT 1 cut(s) 590
Bst6I CTCTTC 2 cut(s) 488, 567
BstBI TTCGAA 1 cut(s) 790
BstC8I GCNNGC 2 cut(s) 1164, 1218
BstDEI CTNAG 4 cut(s) 247, 637, 941, 1222
BstF5I GGATG 2 cut(s) 118, 1155
BstFNI CGCG 1 cut(s) 513
BstHHI GCGC 1 cut(s) 513
BstKTI GATC 3 cut(s) 319, 910, 994
BstMAI GTCTC 4 cut(s) 202, 207, 490, 611
BstMBI GATC 3 cut(s) 316, 907, 991
BstMCI CGRYCG 1 cut(s) 319
BstMWI GCNNNNNNNGC 4 cut(s) 10, 172, 486, 836
BstPAI GACNNNNGTC 1 cut(s) 230
BstSFI CTRYAG 1 cut(s) 888
BstUI CGCG 1 cut(s) 513
BstV1I GCAGC 1 cut(s) 989
BstV2I GAAGAC 1 cut(s) 799
BstXI CCANNNNNNTGG 1 cut(s) 709
Bsu15I ATCGAT 2 cut(s) 315, 319
BsuRI GGCC 2 cut(s) 261, 524
BsuTUI ATCGAT 2 cut(s) 315, 319
BtsCI GGATG 2 cut(s) 118, 1155
BtsI GCAGTG 2 cut(s) 123, 389
BtsIMutI CAGTG 4 cut(s) 123, 197, 389, 1230
BveI ACCTGC 1 cut(s) 786
Cac8I GCNNGC 2 cut(s) 1164, 1218
CfoI GCGC 1 cut(s) 513
Cfr13I GGNCC 3 cut(s) 260, 523, 1249
ClaI ATCGAT 2 cut(s) 315, 319
Csp6I GTAC 2 cut(s) 151, 932
CviAII CATG 3 cut(s) 239, 402, 864
CviQI GTAC 2 cut(s) 151, 932
DdeI CTNAG 4 cut(s) 247, 637, 941, 1222
DpnI GATC 3 cut(s) 318, 909, 993
DpnII GATC 3 cut(s) 316, 907, 991
DraI TTTAAA 3 cut(s) 361, 435, 819
Eam1104I CTCTTC 2 cut(s) 488, 567
EarI CTCTTC 2 cut(s) 488, 567
Eco130I CCWWGG 1 cut(s) 519
Eco32I GATATC 1 cut(s) 313
Eco47I GGWCC 1 cut(s) 1249
Eco57I CTGAAG 3 cut(s) 461, 466, 1167
EcoRV GATATC 1 cut(s) 313
EcoT14I CCWWGG 1 cut(s) 519
ErhI CCWWGG 1 cut(s) 519
Esp3I CGTCTC 2 cut(s) 207, 611
FaeI CATG 3 cut(s) 242, 405, 867
FaiI YATR 9 cut(s) 80, 240, 270, 403, 425, 584, 683, 865, 890
FalI AAGNNNNNCTT 2 cut(s) 519, 551
FatI CATG 3 cut(s) 238, 401, 863
Fnu4HI GCNGC 1 cut(s) 978
FokI GGATG 2 cut(s) 125, 1162
Fsp4HI GCNGC 1 cut(s) 978
FspBI CTAG 3 cut(s) 299, 750, 968
GlaI GCGC 1 cut(s) 512
GluI GCNGC 1 cut(s) 978
GsuI CTGGAG 2 cut(s) 731, 932
HaeIII GGCC 2 cut(s) 261, 524
HapII CCGG 1 cut(s) 1207
HhaI GCGC 1 cut(s) 513
Hin1II CATG 3 cut(s) 242, 405, 867
Hin6I GCGC 1 cut(s) 511
HinP1I GCGC 1 cut(s) 511
HincII GTYRAC 1 cut(s) 724
HindII GTYRAC 1 cut(s) 724
HindIII AAGCTT 2 cut(s) 164, 278
HinfI GANTC 1 cut(s) 427
HpaII CCGG 1 cut(s) 1207
HphI GGTGA 3 cut(s) 592, 767, 1125
Hpy166II GTNNAC 4 cut(s) 253, 724, 1015, 1133
Hpy188I TCNGA 4 cut(s) 876, 942, 1186, 1234
Hpy8I GTNNAC 4 cut(s) 253, 724, 1015, 1133
HpyAV CCTTC 4 cut(s) 408, 782, 947, 991
HpyCH4III ACNGT 1 cut(s) 590
HpyCH4V TGCA 5 cut(s) 116, 242, 800, 871, 1228
HpyF10VI GCNNNNNNNGC 4 cut(s) 10, 172, 486, 836
HpyF3I CTNAG 4 cut(s) 247, 637, 941, 1222
Hsp92II CATG 3 cut(s) 242, 405, 867
HspAI GCGC 1 cut(s) 511
KpnI GGTACC 1 cut(s) 154
Kzo9I GATC 3 cut(s) 316, 907, 991
LmnI GCTCC 4 cut(s) 486, 625, 953, 1209
Lsp1109I GCAGC 1 cut(s) 989
LweI GCATC 5 cut(s) 103, 607, 682, 880, 1089
MaeI CTAG 3 cut(s) 299, 750, 968
MaeIII GTNAC 5 cut(s) 93, 223, 514, 697, 809
MalI GATC 3 cut(s) 318, 909, 993
MboI GATC 3 cut(s) 316, 907, 991
MboII GAAGA 5 cut(s) 454, 505, 554, 804, 1173
MluCI AATT 6 cut(s) 53, 105, 445, 632, 878, 1100
MmeI TCCRAC 1 cut(s) 27
MseI TTAA 8 cut(s) 360, 434, 818, 842, 903, 923, 1127, 1158
MslI CAYNNNNRTG 2 cut(s) 19, 903
MspA1I CMGCKG 1 cut(s) 175
MspI CCGG 1 cut(s) 1207
MssI GTTTAAAC 1 cut(s) 361
Mva1269I GAATGC 1 cut(s) 1228
MvnI CGCG 1 cut(s) 513
MwoI GCNNNNNNNGC 4 cut(s) 10, 172, 486, 836
NdeII GATC 3 cut(s) 316, 907, 991
NlaIII CATG 3 cut(s) 242, 405, 867
NlaIV GGNNCC 6 cut(s) 152, 262, 738, 855, 1090, 1251
NmuCI GTSAC 1 cut(s) 223
NspV TTCGAA 1 cut(s) 790
OliI CACNNNNGTG 1 cut(s) 19
PaqCI CACCTGC 1 cut(s) 786
PctI GAATGC 1 cut(s) 1228
PfeI GAWTC 1 cut(s) 427
PkrI GCNGC 1 cut(s) 979
Ple19I CGATCG 1 cut(s) 319
PmeI GTTTAAAC 1 cut(s) 361
PshAI GACNNNNGTC 1 cut(s) 230
PspN4I GGNNCC 6 cut(s) 152, 262, 738, 855, 1090, 1251
PspPI GGNCC 3 cut(s) 260, 523, 1249
PvuI CGATCG 1 cut(s) 319
PvuII CAGCTG 1 cut(s) 175
RsaI GTAC 2 cut(s) 152, 933
RsaNI GTAC 2 cut(s) 151, 932
RseI CAYNNNNRTG 2 cut(s) 19, 903
SaqAI TTAA 8 cut(s) 360, 434, 818, 842, 903, 923, 1127, 1158
SatI GCNGC 1 cut(s) 978
Sau3AI GATC 3 cut(s) 316, 907, 991
Sau96I GGNCC 3 cut(s) 260, 523, 1249
SfaNI GCATC 5 cut(s) 103, 607, 682, 880, 1089
SfcI CTRYAG 1 cut(s) 888
SfuI TTCGAA 1 cut(s) 790
SinI GGWCC 1 cut(s) 1249
SmiMI CAYNNNNRTG 2 cut(s) 19, 903
SmlI CTYRAG 3 cut(s) 566, 608, 1142
SmoI CTYRAG 3 cut(s) 566, 608, 1142
Sse9I AATT 6 cut(s) 53, 105, 445, 632, 878, 1100
SspMI CTAG 3 cut(s) 299, 750, 968
StyI CCWWGG 1 cut(s) 519
TaaI ACNGT 1 cut(s) 590
TaqI TCGA 3 cut(s) 315, 319, 790
TasI AATT 6 cut(s) 53, 105, 445, 632, 878, 1100
TfiI GAWTC 1 cut(s) 427
Tru1I TTAA 8 cut(s) 360, 434, 818, 842, 903, 923, 1127, 1158
Tru9I TTAA 8 cut(s) 360, 434, 818, 842, 903, 923, 1127, 1158
TscAI CASTG 4 cut(s) 123, 197, 389, 1230
TseFI GTSAC 1 cut(s) 223
TseI GCWGC 1 cut(s) 977
Tsp45I GTSAC 1 cut(s) 223
TspDTI ATGAA 4 cut(s) 390, 419, 571, 1099
TspRI CASTG 4 cut(s) 123, 197, 389, 1230
VpaK11BI GGWCC 1 cut(s) 1249
XapI RAATTY 2 cut(s) 53, 878
XspI CTAG 3 cut(s) 299, 750, 968
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.