RchiOBHm_Chr6g0248791

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000103
Physical Location & Seq
Reverse (-)
4683802 .. 4685272
1471 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22301

Sequence Viewer

Length: 1269 bp
ATGATTTTGTCACGTTTGCCGCTTAGGGAAGCAGTGAGGACAAGTGTTTTATCCAGCAAGTGGAGGTACAAATCGGCCATGCTTCAAGATCTAAAATTTAATGAATATGTTTGGAGGGGAAGCCAAAATCGGTATGATGATCAAATCCAAACAACCTTCGTGAACATGGTTGATCATGTACTCTTACTTCATATTGGCCCCATTCGCAAGTTCGAGCTGTTTGCTGATGATTTAGCCACTAGAGATATTGATCGATGGCTTACTCATCTATCAAGAAACTCGATCAAAGAGCTGGTACTTCGTCTTTGCGTATCTGAATACCACATTCCATTATGTGTGTTTTCTTGTCAAGATCTCGTTCTTTTGGTGTTAACTCAATCTTTTCTTACGGAGTCAAATTTACATAAGGTTTGGCTCAAACCTCCGTCGACGTTCAAAGGATTCAGGAGCTTGAAGAGCCTTCAACTTGTGGGCATCACCATGGCCCAACATGTGTTTGAAAATTTGACATGTTGCACTCCTCTGCTTGAGAGATTAATATTGCGACATTGTTATGGTGTCACCACTCTCAATATTGATGCACCAAATCTCAAATTTTTAGATATTTCAGGTGTCTTTGATGTTGTCAATCCTAAAAGTACCCTAAATCTTACTGATGCTTCAATCGGTGTGACCATCTATTCTCCTGTCAGTCGGGTTCCTGTCAGTTGGGTTCCTAGCAGTTCCAGCAATTTGCTCAAGATTTTTTATCACCTCCCTCATATTCGAAGGTTCGCAATTAAGTCGCACTTTTTAAAGTATTTGTCTCTTGGTGCCTTTCCAGAAAAGCTTCCTAAACCATGTGAATATCTGAATGTTCTTTCTATAGACATATGCCTTGATGATCCGGATGCAATTCTAACTGCTCTATGCATTCTGAGAAGCTCCCCTGCTCTACAGGAATTAGAAATTTTTATGGATGCCAGAAAGAAACTCACAAGCAGTCCCACTGTTGTCGAAGAACAGAAATCTTCTTGTTTAGATGTGAGCTACAATTGCACACTTTCTCAACTGCGACTTGTGAAAATAACTGAGATCTCTGGTGTTAAAGCTGAACTAGATTTCATCAGATTTCTACTTTTAAGTTCACCTGTGCTTGAGAGAATGACTGTCACGCCTCATAAATTTCCCAAGCCTGTTTATGTGGAACGTTTTTCGAAACTTGTAAAAGAGCTACTCCAGTTTAAACGTGAATCAAAACATGCAGAGATTATTCTCCTGGACCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

422

Amino Acids

48.36

Weight (kDa)

8.93

Isoelectric Point (pI)

52.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 76 - 384 5.3e-11 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 83 - 317 2.7e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 346 - 383 5.3e-07 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 812
AccB7I CCANNNNNTGG 1 cut(s) 60
AccI GTMKAC 1 cut(s) 428
AccIII TCCGGA 1 cut(s) 886
AciI CCGC 1 cut(s) 20
AclI AACGTT 1 cut(s) 1189
AclWI GGATC 1 cut(s) 878
AcoI YGGCCR 1 cut(s) 75
AcsI RAATTY 6 cut(s) 95, 397, 502, 593, 948, 1163
AfaI GTAC 4 cut(s) 68, 180, 297, 640
AfiI CCNNNNNNNGG 1 cut(s) 60
AflIII ACRYGT 2 cut(s) 490, 509
AgsI TTSAA 6 cut(s) 86, 436, 454, 464, 500, 663
AjnI CCWGG 1 cut(s) 1257
AluBI AGCT 8 cut(s) 217, 292, 450, 829, 924, 1029, 1091, 1213
AluI AGCT 8 cut(s) 217, 292, 450, 829, 924, 1029, 1091, 1213
Alw26I GTCTC 1 cut(s) 810
AlwI GGATC 1 cut(s) 878
Aor13HI TCCGGA 1 cut(s) 886
AoxI GGCC 3 cut(s) 75, 196, 483
ApoI RAATTY 6 cut(s) 95, 397, 502, 593, 948, 1163
AseI ATTAAT 1 cut(s) 536
Asp700I GAANNNNTTC 1 cut(s) 828
AspS9I GGNCC 3 cut(s) 197, 484, 1261
AsuHPI GGTGA 4 cut(s) 469, 553, 743, 1119
AsuII TTCGAA 2 cut(s) 766, 1196
AvaII GGWCC 1 cut(s) 1261
BanI GGYRCC 1 cut(s) 812
BarI GAAGNNNNNNTAC 2 cut(s) 171, 203
BccI CCATC 2 cut(s) 249, 683
BcgI CGANNNNNNTGC 4 cut(s) 203, 237, 765, 799
BciT130I CCWGG 1 cut(s) 1259
BclI TGATCA 2 cut(s) 139, 172
BcoDI GTCTC 1 cut(s) 810
BfaI CTAG 3 cut(s) 240, 717, 1097
BfmI CTRYAG 2 cut(s) 864, 935
BglII AGATCT 3 cut(s) 88, 352, 1074
BisI GCNGC 1 cut(s) 20
BlsI GCNGC 1 cut(s) 21
Bme1390I CCNGG 1 cut(s) 1259
Bme18I GGWCC 1 cut(s) 1261
BmgT120I GGNCC 3 cut(s) 197, 484, 1261
BmiI GGNNCC 5 cut(s) 199, 699, 714, 814, 1263
BmrFI CCNGG 1 cut(s) 1259
BmsI GCATC 5 cut(s) 483, 568, 646, 880, 949
BpmI CTGGAG 1 cut(s) 1202
Bpu10I CCTNAGC 1 cut(s) 23
Bpu14I TTCGAA 2 cut(s) 766, 1196
BpuEI CTTGAG 3 cut(s) 548, 722, 1157
Bsa29I ATCGAT 1 cut(s) 253
BsaBI GATNNNNATC 1 cut(s) 249
BsaJI CCNNGG 1 cut(s) 480
BsaWI WCCGGW 1 cut(s) 886
Bsc4I CCNNNNNNNGG 1 cut(s) 60
Bse1I ACTGG 1 cut(s) 1219
Bse8I GATNNNNATC 1 cut(s) 249
BseAI TCCGGA 1 cut(s) 886
BseBI CCWGG 1 cut(s) 1259
BseCI ATCGAT 1 cut(s) 253
BseDI CCNNGG 1 cut(s) 480
BseGI GGATG 2 cut(s) 895, 964
BseJI GATNNNNATC 1 cut(s) 249
BseLI CCNNNNNNNGG 1 cut(s) 60
BseMII CTCAG 2 cut(s) 908, 1062
BseNI ACTGG 1 cut(s) 1219
BseRI GAGGAG 1 cut(s) 510
BshFI GGCC 3 cut(s) 77, 198, 485
BshNI GGYRCC 1 cut(s) 812
BshVI ATCGAT 1 cut(s) 253
BsiSI CCGG 1 cut(s) 887
BslFI GGGAC 1 cut(s) 969
BslI CCNNNNNNNGG 1 cut(s) 60
BsmAI GTCTC 1 cut(s) 810
BsmFI GGGAC 1 cut(s) 969
BsmI GAATGC 1 cut(s) 912
BsnI GGCC 3 cut(s) 77, 198, 485
Bsp119I TTCGAA 2 cut(s) 766, 1196
Bsp13I TCCGGA 1 cut(s) 886
Bsp143I GATC 8 cut(s) 88, 139, 172, 250, 282, 352, 883, 1074
Bsp19I CCATGG 1 cut(s) 480
BspACI CCGC 1 cut(s) 20
BspANI GGCC 3 cut(s) 77, 198, 485
BspCNI CTCAG 2 cut(s) 909, 1063
BspDI ATCGAT 1 cut(s) 253
BspEI TCCGGA 1 cut(s) 886
BspLI GGNNCC 5 cut(s) 199, 699, 714, 814, 1263
BspPI GGATC 1 cut(s) 878
BspQI GCTCTTC 1 cut(s) 449
BspT104I TTCGAA 2 cut(s) 766, 1196
BspT107I GGYRCC 1 cut(s) 812
BsrI ACTGG 1 cut(s) 1219
BssECI CCNNGG 1 cut(s) 480
BssMI GATC 8 cut(s) 88, 139, 172, 250, 282, 352, 883, 1074
BssT1I CCWWGG 1 cut(s) 480
Bst2UI CCWGG 1 cut(s) 1259
Bst4CI ACNGT 2 cut(s) 991, 1150
Bst6I CTCTTC 1 cut(s) 449
BstBI TTCGAA 2 cut(s) 766, 1196
BstDEI CTNAG 3 cut(s) 23, 917, 1071
BstDSI CCRYGG 1 cut(s) 480
BstF5I GGATG 2 cut(s) 895, 964
BstKTI GATC 8 cut(s) 91, 142, 175, 253, 285, 355, 886, 1077
BstMAI GTCTC 1 cut(s) 810
BstMBI GATC 8 cut(s) 88, 139, 172, 250, 282, 352, 883, 1074
BstMWI GCNNNNNNNGC 4 cut(s) 204, 456, 726, 1035
BstNI CCWGG 1 cut(s) 1259
BstNSI RCATGY 3 cut(s) 494, 513, 1244
BstSCI CCNGG 1 cut(s) 1257
BstSFI CTRYAG 2 cut(s) 864, 935
BstX2I RGATCY 3 cut(s) 88, 352, 1074
BstYI RGATCY 3 cut(s) 88, 352, 1074
Bsu15I ATCGAT 1 cut(s) 253
BsuRI GGCC 3 cut(s) 77, 198, 485
BsuTUI ATCGAT 1 cut(s) 253
BtgI CCRYGG 1 cut(s) 480
BtsCI GGATG 2 cut(s) 895, 964
BtsI GCAGTG 1 cut(s) 39
BtsIMutI CAGTG 2 cut(s) 39, 987
Cfr13I GGNCC 3 cut(s) 197, 484, 1261
ClaI ATCGAT 1 cut(s) 253
Csp6I GTAC 4 cut(s) 67, 179, 296, 639
CviAII CATG 8 cut(s) 79, 166, 176, 481, 491, 510, 840, 1241
CviQI GTAC 4 cut(s) 67, 179, 296, 639
DdeI CTNAG 3 cut(s) 23, 917, 1071
DpnI GATC 8 cut(s) 90, 141, 174, 252, 284, 354, 885, 1076
DpnII GATC 8 cut(s) 88, 139, 172, 250, 282, 352, 883, 1074
DraI TTTAAA 2 cut(s) 795, 1225
EaeI YGGCCR 1 cut(s) 75
Eam1104I CTCTTC 1 cut(s) 449
EarI CTCTTC 1 cut(s) 449
Eco130I CCWWGG 1 cut(s) 480
Eco47I GGWCC 1 cut(s) 1261
EcoRII CCWGG 1 cut(s) 1257
EcoT14I CCWWGG 1 cut(s) 480
EcoT22I ATGCAT 1 cut(s) 914
ErhI CCWWGG 1 cut(s) 480
FaeI CATG 8 cut(s) 82, 169, 179, 484, 494, 513, 843, 1244
FalI AAGNNNNNCTT 2 cut(s) 773, 805
FaqI GGGAC 1 cut(s) 969
FatI CATG 8 cut(s) 78, 165, 175, 480, 490, 509, 839, 1240
FauNDI CATATG 1 cut(s) 872
FbaI TGATCA 2 cut(s) 139, 172
FblI GTMKAC 1 cut(s) 428
Fnu4HI GCNGC 1 cut(s) 20
FokI GGATG 2 cut(s) 902, 971
Fsp4HI GCNGC 1 cut(s) 20
FspBI CTAG 3 cut(s) 240, 717, 1097
GluI GCNGC 1 cut(s) 20
GsuI CTGGAG 1 cut(s) 1202
HaeIII GGCC 3 cut(s) 77, 198, 485
HapII CCGG 1 cut(s) 887
Hin1II CATG 8 cut(s) 82, 169, 179, 484, 494, 513, 843, 1244
HincII GTYRAC 2 cut(s) 372, 429
HindII GTYRAC 2 cut(s) 372, 429
HindIII AAGCTT 1 cut(s) 827
HinfI GANTC 3 cut(s) 392, 441, 1232
HpaI GTTAAC 1 cut(s) 372
HpaII CCGG 1 cut(s) 887
HphI GGTGA 4 cut(s) 469, 553, 743, 1119
Hpy166II GTNNAC 4 cut(s) 163, 372, 429, 1127
Hpy188I TCNGA 4 cut(s) 316, 852, 918, 1109
Hpy188III TCNNGA 8 cut(s) 86, 160, 273, 350, 445, 739, 821, 887
Hpy8I GTNNAC 4 cut(s) 163, 372, 429, 1127
Hpy99I CGWCG 2 cut(s) 430, 433
HpyAV CCTTC 3 cut(s) 166, 470, 762
HpyCH4III ACNGT 2 cut(s) 991, 1150
HpyCH4IV ACGT 4 cut(s) 13, 431, 1189, 1228
HpyCH4V TGCA 6 cut(s) 516, 581, 893, 912, 1038, 1244
HpyF10VI GCNNNNNNNGC 4 cut(s) 204, 456, 726, 1035
HpyF3I CTNAG 3 cut(s) 23, 917, 1071
HpySE526I ACGT 4 cut(s) 13, 431, 1189, 1228
Hsp92II CATG 8 cut(s) 82, 169, 179, 484, 494, 513, 843, 1244
Kpn2I TCCGGA 1 cut(s) 886
Ksp22I TGATCA 2 cut(s) 139, 172
KspAI GTTAAC 1 cut(s) 372
Kzo9I GATC 8 cut(s) 88, 139, 172, 250, 282, 352, 883, 1074
LguI GCTCTTC 1 cut(s) 449
LmnI GCTCC 2 cut(s) 447, 929
LweI GCATC 5 cut(s) 483, 568, 646, 880, 949
MaeI CTAG 3 cut(s) 240, 717, 1097
MaeII ACGT 4 cut(s) 13, 431, 1189, 1228
MaeIII GTNAC 4 cut(s) 9, 559, 670, 1150
MalI GATC 8 cut(s) 90, 141, 174, 252, 284, 354, 885, 1076
MboI GATC 8 cut(s) 88, 139, 172, 250, 282, 352, 883, 1074
MboII GAAGA 3 cut(s) 466, 1002, 1010
MfeI CAATTG 1 cut(s) 1033
MflI RGATCY 3 cut(s) 88, 352, 1074
MlyI GAGTC 1 cut(s) 401
MnlI CCTC 8 cut(s) 30, 57, 108, 432, 531, 764, 768, 1167
Mph1103I ATGCAT 1 cut(s) 914
MroI TCCGGA 1 cut(s) 886
MroXI GAANNNNTTC 1 cut(s) 828
MseI TTAA 8 cut(s) 99, 371, 536, 780, 794, 1086, 1121, 1224
MslI CAYNNNNRTG 2 cut(s) 479, 552
MspI CCGG 1 cut(s) 887
MspR9I CCNGG 1 cut(s) 1259
MssI GTTTAAAC 1 cut(s) 1225
MunI CAATTG 1 cut(s) 1033
Mva1269I GAATGC 1 cut(s) 912
MvaI CCWGG 1 cut(s) 1259
MwoI GCNNNNNNNGC 4 cut(s) 204, 456, 726, 1035
NcoI CCATGG 1 cut(s) 480
NdeI CATATG 1 cut(s) 872
NdeII GATC 8 cut(s) 88, 139, 172, 250, 282, 352, 883, 1074
NlaIII CATG 8 cut(s) 82, 169, 179, 484, 494, 513, 843, 1244
NlaIV GGNNCC 5 cut(s) 199, 699, 714, 814, 1263
NmuCI GTSAC 4 cut(s) 9, 559, 670, 1150
NsiI ATGCAT 1 cut(s) 914
NspI RCATGY 3 cut(s) 494, 513, 1244
NspV TTCGAA 2 cut(s) 766, 1196
PciI ACATGT 2 cut(s) 490, 509
PciSI GCTCTTC 1 cut(s) 449
PctI GAATGC 1 cut(s) 912
PdmI GAANNNNTTC 1 cut(s) 828
PfeI GAWTC 2 cut(s) 441, 1232
PflMI CCANNNNNTGG 1 cut(s) 60
PfoI TCCNGGA 1 cut(s) 1257
PkrI GCNGC 1 cut(s) 21
PleI GAGTC 1 cut(s) 400
PmeI GTTTAAAC 1 cut(s) 1225
PpsI GAGTC 1 cut(s) 400
PscI ACATGT 2 cut(s) 490, 509
PshBI ATTAAT 1 cut(s) 536
Psp1406I AACGTT 1 cut(s) 1189
Psp6I CCWGG 1 cut(s) 1257
PspGI CCWGG 1 cut(s) 1257
PspN4I GGNNCC 5 cut(s) 199, 699, 714, 814, 1263
PspPI GGNCC 3 cut(s) 197, 484, 1261
PsuI RGATCY 3 cut(s) 88, 352, 1074
RsaI GTAC 4 cut(s) 68, 180, 297, 640
RsaNI GTAC 4 cut(s) 67, 179, 296, 639
RseI CAYNNNNRTG 2 cut(s) 479, 552
SalI GTCGAC 1 cut(s) 427
SapI GCTCTTC 1 cut(s) 449
SaqAI TTAA 8 cut(s) 99, 371, 536, 780, 794, 1086, 1121, 1224
SatI GCNGC 1 cut(s) 20
Sau3AI GATC 8 cut(s) 88, 139, 172, 250, 282, 352, 883, 1074
Sau96I GGNCC 3 cut(s) 197, 484, 1261
SchI GAGTC 1 cut(s) 401
ScrFI CCNGG 1 cut(s) 1259
SfaNI GCATC 5 cut(s) 483, 568, 646, 880, 949
SfcI CTRYAG 2 cut(s) 864, 935
SfuI TTCGAA 2 cut(s) 766, 1196
SgrDI CGTCGACG 1 cut(s) 427
SinI GGWCC 1 cut(s) 1261
SmiMI CAYNNNNRTG 2 cut(s) 479, 552
SmlI CTYRAG 3 cut(s) 527, 737, 1136
SmoI CTYRAG 3 cut(s) 527, 737, 1136
SsiI CCGC 1 cut(s) 20
SspI AATATT 2 cut(s) 540, 574
SspMI CTAG 3 cut(s) 240, 717, 1097
StyD4I CCNGG 1 cut(s) 1257
StyI CCWWGG 1 cut(s) 480
TaaI ACNGT 2 cut(s) 991, 1150
TaiI ACGT 4 cut(s) 16, 434, 1192, 1231
TaqI TCGA 7 cut(s) 213, 253, 281, 428, 766, 996, 1196
TatI WGTACW 1 cut(s) 178
TauI GCSGC 1 cut(s) 22
TfiI GAWTC 2 cut(s) 441, 1232
Tru1I TTAA 8 cut(s) 99, 371, 536, 780, 794, 1086, 1121, 1224
Tru9I TTAA 8 cut(s) 99, 371, 536, 780, 794, 1086, 1121, 1224
TscAI CASTG 2 cut(s) 39, 994
TseFI GTSAC 4 cut(s) 9, 559, 670, 1150
Tsp45I GTSAC 4 cut(s) 9, 559, 670, 1150
TspDTI ATGAA 3 cut(s) 117, 179, 1093
TspGWI ACGGA 2 cut(s) 404, 414
TspRI CASTG 2 cut(s) 39, 994
Van91I CCANNNNNTGG 1 cut(s) 60
VpaK11BI GGWCC 1 cut(s) 1261
VspI ATTAAT 1 cut(s) 536
XapI RAATTY 6 cut(s) 95, 397, 502, 593, 948, 1163
XceI RCATGY 3 cut(s) 494, 513, 1244
XmiI GTMKAC 1 cut(s) 428
XmnI GAANNNNTTC 1 cut(s) 828
XspI CTAG 3 cut(s) 240, 717, 1097
Zsp2I ATGCAT 1 cut(s) 914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.