pycom10g09400

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0000103
Physical Location & Seq
Forward (+)
12478865 .. 12480312
1448 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g09400.1

Sequence Viewer

Length: 1260 bp
ATGGCGTTGGATAGAATAAGCAACTTACCAAGCGATGTTGTAGAAAATATTCTGTCCCGTTTGTCGATTAAGGAGGCAGTAAGTGCAAGTGTTTTATCAAGTAACTGGAGGTACAAGACGGCTATGCTTTCACATCTTGTGTTTGATGATCGGTGTTTTTCAAATAAAAACCTTACAACTTTTGAGAATATTGTCAATCAAGTACTCCTACTTCACATTGGACCCATAAACACATTCAAGCTTTCCCATCGAGATCGTTTTGCCACTAGTGATATTGATCGATGGATTCTTCATCTCTCGAGAAATGCTATCAAAGAGTTTATACTCGACATTTGGCAAGGGGATCCCTACAAGGTGCCTTCATGTTTGTTTTCTTGTCAAGATTTAGTTCATTTGGAGTTATACAACTGTTTGCTAAAACCTCCTTCCACATTCAAAGGCTTCAAGAGTTTGAAGAGCCTTTATATTCACTTGATTACTCTGGCCCCAGATGTGTTTGATAAAATGATTGTTTGCAGTCCTCTGCTTGAGAAGTTGACTGTAGTGTACATTCATGGTTTAACACGTCTCAAGATTGGTGCACCAAATCTACAATATCTTAAGGTTGAAGGTGATTTCGAGGATGTTTCCCTTGAGAATACTTCAAATCTTGTTGAAGTTTCCATTGCCTTGGATGGTAGCTATGGCCAGAGGCTGGTTCCTGGCAATTGTAGCAATTTGGTAAAGTTTTTTGTTCACCTGCCTCATATTCGACGGCTAAAGATTAAGAGTTTCTTTTTACAGCGTATTAATTCACTGATCCTGCTTCCTTCTGCATCTTTTCTTCTCCAGTATTTAGCTTTTGGTGATTTGCCGGAGAAGCTTCCTGAACCATTAGTATCTCTGAATTATCTCTCTCTCAGTATACGCTTTAAGCATCTGAAGGAGCTGTTAACTGCTCTTTTCCTTATAAGAAATTCTCCTTCTCTAGAAGTACTAAGCATTTCGGCAGAGGAGGATCAGGTTGTACTTGTGGAAGAAGCAAAGTATTTGTTAGATGACAACGAGAATTGCCTGTTGACCCAACTACAAATTGTGACAATAATTGGAGTTTCCGGTGTTGAAACAGAACTAGATTTTATCAGATTTCTGCTTTCAAATGCACCTGTGCTTAAGAGGATGACTGTTAAACCTGCTTCTGTGAATGGTGAACTAGTGAAGAAGTTGCTCCAGTTTAGGCGTGCCTCAGCTTTTGCAGAGATAATCTACATGGACCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

420

Amino Acids

47.55

Weight (kDa)

7.13

Isoelectric Point (pI)

37.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 38 2.7e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 78 - 391 8.1e-14 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 92 - 256 5.9e-12 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 351 - 388 1e-10 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 950
AarI CACCTGC 1 cut(s) 747
Acc36I ACCTGC 2 cut(s) 747, 1180
AccB1I GGYRCC 1 cut(s) 355
AccB7I CCANNNNNTGG 1 cut(s) 694
AccI GTMKAC 1 cut(s) 904
AclWI GGATC 4 cut(s) 338, 351, 793, 1005
AcoI YGGCCR 1 cut(s) 685
AcsI RAATTY 1 cut(s) 955
AcuI CTGAAG 1 cut(s) 941
AfaI GTAC 5 cut(s) 113, 204, 548, 975, 1008
AfiI CCNNNNNNNGG 1 cut(s) 694
AflII CTTAAG 2 cut(s) 599, 1151
AflIII ACRYGT 1 cut(s) 563
AhlI ACTAGT 2 cut(s) 266, 1192
AjiI CACGTC 1 cut(s) 566
AjnI CCWGG 1 cut(s) 700
AluBI AGCT 6 cut(s) 241, 681, 839, 862, 928, 1229
AluI AGCT 6 cut(s) 241, 681, 839, 862, 928, 1229
Alw21I GWGCWC 1 cut(s) 583
Alw26I GTCTC 1 cut(s) 572
Alw44I GTGCAC 1 cut(s) 579
AlwI GGATC 4 cut(s) 338, 351, 793, 1005
AlwNI CAGNNNCTG 1 cut(s) 694
Ama87I CYCGRG 1 cut(s) 298
AoxI GGCC 2 cut(s) 483, 685
ApaLI GTGCAC 1 cut(s) 579
ApoI RAATTY 1 cut(s) 955
AseI ATTAAT 1 cut(s) 789
Asp700I GAANNNNTTC 1 cut(s) 48
AspS9I GGNCC 3 cut(s) 221, 484, 1252
AsuHPI GGTGA 4 cut(s) 623, 728, 857, 1199
AvaI CYCGRG 1 cut(s) 298
AvaII GGWCC 2 cut(s) 221, 1252
BaeGI GKGCMC 1 cut(s) 583
BalI TGGCCA 1 cut(s) 687
BamHI GGATCC 1 cut(s) 343
BanI GGYRCC 1 cut(s) 355
BarI GAAGNNNNNNTAC 2 cut(s) 195, 227
Bbv12I GWGCWC 1 cut(s) 583
BbvCI CCTCAGC 1 cut(s) 1225
BccI CCATC 3 cut(s) 255, 276, 668
BceAI ACGGC 2 cut(s) 135, 770
BciT130I CCWGG 1 cut(s) 702
BcoDI GTCTC 1 cut(s) 572
BcuI ACTAGT 2 cut(s) 266, 1192
BfaI CTAG 4 cut(s) 267, 968, 1112, 1193
BfmI CTRYAG 1 cut(s) 540
BfrI CTTAAG 2 cut(s) 599, 1151
BfuAI ACCTGC 2 cut(s) 747, 1180
BmcAI AGTACT 2 cut(s) 204, 975
Bme1390I CCNGG 1 cut(s) 702
Bme18I GGWCC 2 cut(s) 221, 1252
BmeT110I CYCGRG 1 cut(s) 298
BmgBI CACGTC 1 cut(s) 566
BmgT120I GGNCC 3 cut(s) 221, 484, 1252
BmiI GGNNCC 6 cut(s) 223, 345, 357, 486, 699, 1254
BmrFI CCNGG 1 cut(s) 702
BmsI GCATC 2 cut(s) 824, 925
BpmI CTGGAG 3 cut(s) 127, 812, 1193
Bpu10I CCTNAGC 1 cut(s) 1225
BpuEI CTTGAG 3 cut(s) 548, 554, 653
Bsa29I ATCGAT 1 cut(s) 280
BsaBI GATNNNNATC 1 cut(s) 276
BsaJI CCNNGG 1 cut(s) 669
BsaWI WCCGGW 1 cut(s) 1094
Bsc4I CCNNNNNNNGG 1 cut(s) 694
Bse1I ACTGG 3 cut(s) 110, 829, 1210
Bse3DI GCAATG 1 cut(s) 663
Bse8I GATNNNNATC 1 cut(s) 276
BseBI CCWGG 1 cut(s) 702
BseCI ATCGAT 1 cut(s) 280
BseDI CCNNGG 1 cut(s) 669
BseGI GGATG 3 cut(s) 628, 679, 1164
BseJI GATNNNNATC 1 cut(s) 276
BseLI CCNNNNNNNGG 1 cut(s) 694
BseMI GCAATG 1 cut(s) 663
BseMII CTCAG 2 cut(s) 913, 1239
BseNI ACTGG 3 cut(s) 110, 829, 1210
BseRI GAGGAG 1 cut(s) 1007
BseSI GKGCMC 1 cut(s) 583
BshFI GGCC 2 cut(s) 485, 687
BshNI GGYRCC 1 cut(s) 355
BshVI ATCGAT 1 cut(s) 280
BsiHKAI GWGCWC 1 cut(s) 583
BsiHKCI CYCGRG 1 cut(s) 298
BsiSI CCGG 2 cut(s) 854, 1095
BslFI GGGAC 1 cut(s) 40
BslI CCNNNNNNNGG 1 cut(s) 694
BsmAI GTCTC 1 cut(s) 572
BsmBI CGTCTC 1 cut(s) 572
BsmFI GGGAC 1 cut(s) 40
BsnI GGCC 2 cut(s) 485, 687
BsoBI CYCGRG 1 cut(s) 298
Bsp1286I GDGCHC 1 cut(s) 583
Bsp1407I TGTACA 1 cut(s) 546
Bsp143I GATC 6 cut(s) 148, 253, 277, 343, 798, 997
BspANI GGCC 2 cut(s) 485, 687
BspCNI CTCAG 2 cut(s) 912, 1238
BspDI ATCGAT 1 cut(s) 280
BspLI GGNNCC 6 cut(s) 223, 345, 357, 486, 699, 1254
BspMI ACCTGC 2 cut(s) 747, 1180
BspPI GGATC 4 cut(s) 338, 351, 793, 1005
BspQI GCTCTTC 1 cut(s) 449
BspT107I GGYRCC 1 cut(s) 355
BspTI CTTAAG 2 cut(s) 599, 1151
BsrDI GCAATG 1 cut(s) 663
BsrGI TGTACA 1 cut(s) 546
BsrI ACTGG 3 cut(s) 110, 829, 1210
BssECI CCNNGG 1 cut(s) 669
BssMI GATC 6 cut(s) 148, 253, 277, 343, 798, 997
BssNAI GTATAC 1 cut(s) 905
BssT1I CCWWGG 1 cut(s) 669
Bst1107I GTATAC 1 cut(s) 905
Bst2UI CCWGG 1 cut(s) 702
Bst4CI ACNGT 3 cut(s) 410, 541, 1165
Bst6I CTCTTC 1 cut(s) 449
BstAFI CTTAAG 2 cut(s) 599, 1151
BstAPI GCANNNNNTGC 1 cut(s) 83
BstAUI TGTACA 1 cut(s) 546
BstC8I GCNNGC 1 cut(s) 1221
BstDEI CTNAG 3 cut(s) 899, 977, 1225
BstF5I GGATG 3 cut(s) 628, 679, 1164
BstKTI GATC 6 cut(s) 151, 256, 280, 346, 801, 1000
BstMAI GTCTC 1 cut(s) 572
BstMBI GATC 6 cut(s) 148, 253, 277, 343, 798, 997
BstMWI GCNNNNNNNGC 3 cut(s) 83, 711, 859
BstNI CCWGG 1 cut(s) 702
BstSCI CCNGG 1 cut(s) 700
BstSFI CTRYAG 1 cut(s) 540
BstSLI GKGCMC 1 cut(s) 583
BstX2I RGATCY 1 cut(s) 343
BstXI CCANNNNNNTGG 1 cut(s) 670
BstYI RGATCY 1 cut(s) 343
BstZ17I GTATAC 1 cut(s) 905
Bsu15I ATCGAT 1 cut(s) 280
BsuRI GGCC 2 cut(s) 485, 687
BsuTUI ATCGAT 1 cut(s) 280
BtgZI GCGATG 1 cut(s) 48
BtrI CACGTC 1 cut(s) 566
BtsCI GGATG 3 cut(s) 628, 679, 1164
BtsIMutI CAGTG 1 cut(s) 794
BveI ACCTGC 2 cut(s) 747, 1180
Cac8I GCNNGC 1 cut(s) 1221
CaiI CAGNNNCTG 1 cut(s) 694
Cfr13I GGNCC 3 cut(s) 221, 484, 1252
ClaI ATCGAT 1 cut(s) 280
Csp6I GTAC 5 cut(s) 112, 203, 547, 974, 1007
CviAII CATG 3 cut(s) 363, 554, 1249
CviQI GTAC 5 cut(s) 112, 203, 547, 974, 1007
DdeI CTNAG 3 cut(s) 899, 977, 1225
DpnI GATC 6 cut(s) 150, 255, 279, 345, 800, 999
DpnII GATC 6 cut(s) 148, 253, 277, 343, 798, 997
EaeI YGGCCR 1 cut(s) 685
Eam1104I CTCTTC 1 cut(s) 449
EarI CTCTTC 1 cut(s) 449
Eco130I CCWWGG 1 cut(s) 669
Eco47I GGWCC 2 cut(s) 221, 1252
Eco57I CTGAAG 1 cut(s) 941
Eco88I CYCGRG 1 cut(s) 298
EcoRII CCWGG 1 cut(s) 700
EcoT14I CCWWGG 1 cut(s) 669
ErhI CCWWGG 1 cut(s) 669
Esp3I CGTCTC 1 cut(s) 572
FaeI CATG 3 cut(s) 366, 557, 1252
FalI AAGNNNNNCTT 2 cut(s) 758, 790
FaqI GGGAC 1 cut(s) 40
FatI CATG 3 cut(s) 362, 553, 1248
FblI GTMKAC 1 cut(s) 904
FokI GGATG 3 cut(s) 635, 686, 1171
FspBI CTAG 4 cut(s) 267, 968, 1112, 1193
GsuI CTGGAG 3 cut(s) 127, 812, 1193
HaeIII GGCC 2 cut(s) 485, 687
HapII CCGG 2 cut(s) 854, 1095
Hin1II CATG 3 cut(s) 366, 557, 1252
HincII GTYRAC 3 cut(s) 537, 933, 1059
HindII GTYRAC 3 cut(s) 537, 933, 1059
HindIII AAGCTT 2 cut(s) 239, 860
HinfI GANTC 1 cut(s) 286
HpaI GTTAAC 1 cut(s) 933
HpaII CCGG 2 cut(s) 854, 1095
HphI GGTGA 4 cut(s) 623, 728, 857, 1199
Hpy166II GTNNAC 8 cut(s) 537, 547, 581, 736, 905, 933, 1059, 1190
Hpy188I TCNGA 3 cut(s) 885, 921, 1124
Hpy188III TCNNGA 8 cut(s) 251, 298, 300, 380, 445, 571, 866, 968
Hpy8I GTNNAC 8 cut(s) 537, 547, 581, 736, 905, 933, 1059, 1190
Hpy99I CGWCG 1 cut(s) 756
HpyAV CCTTC 6 cut(s) 369, 435, 602, 819, 916, 972
HpyCH4III ACNGT 3 cut(s) 410, 541, 1165
HpyCH4IV ACGT 1 cut(s) 565
HpyCH4V TGCA 6 cut(s) 86, 516, 581, 815, 1142, 1235
HpyF10VI GCNNNNNNNGC 3 cut(s) 83, 711, 859
HpyF3I CTNAG 3 cut(s) 899, 977, 1225
HpySE526I ACGT 1 cut(s) 565
Hsp92II CATG 3 cut(s) 366, 557, 1252
KspAI GTTAAC 1 cut(s) 933
Kzo9I GATC 6 cut(s) 148, 253, 277, 343, 798, 997
LguI GCTCTTC 1 cut(s) 449
LmnI GCTCC 2 cut(s) 925, 1212
LweI GCATC 2 cut(s) 824, 925
MaeI CTAG 4 cut(s) 267, 968, 1112, 1193
MaeII ACGT 1 cut(s) 565
MaeIII GTNAC 2 cut(s) 101, 1075
MalI GATC 6 cut(s) 150, 255, 279, 345, 800, 999
MboI GATC 6 cut(s) 148, 253, 277, 343, 798, 997
MboII GAAGA 5 cut(s) 281, 466, 815, 1028, 1210
MfeI CAATTG 1 cut(s) 706
MflI RGATCY 1 cut(s) 343
MhlI GDGCHC 1 cut(s) 583
MlsI TGGCCA 1 cut(s) 687
MluCI AATT 8 cut(s) 706, 715, 790, 886, 955, 1048, 1071, 1083
MluNI TGGCCA 1 cut(s) 687
Mox20I TGGCCA 1 cut(s) 687
MroXI GAANNNNTTC 1 cut(s) 48
MscI TGGCCA 1 cut(s) 687
MseI TTAA 9 cut(s) 69, 560, 600, 765, 789, 912, 932, 1152, 1167
Msp20I TGGCCA 1 cut(s) 687
MspCI CTTAAG 2 cut(s) 599, 1151
MspI CCGG 2 cut(s) 854, 1095
MspR9I CCNGG 1 cut(s) 702
MunI CAATTG 1 cut(s) 706
MvaI CCWGG 1 cut(s) 702
MwoI GCNNNNNNNGC 3 cut(s) 83, 711, 859
NdeII GATC 6 cut(s) 148, 253, 277, 343, 798, 997
NlaIII CATG 3 cut(s) 366, 557, 1252
NlaIV GGNNCC 6 cut(s) 223, 345, 357, 486, 699, 1254
NmuCI GTSAC 1 cut(s) 1075
PaeR7I CTCGAG 1 cut(s) 298
PaqCI CACCTGC 1 cut(s) 747
PciSI GCTCTTC 1 cut(s) 449
PdmI GAANNNNTTC 1 cut(s) 48
PfeI GAWTC 1 cut(s) 286
PflMI CCANNNNNTGG 1 cut(s) 694
PshBI ATTAAT 1 cut(s) 789
PsiI TTATAA 1 cut(s) 950
Psp6I CCWGG 1 cut(s) 700
PspGI CCWGG 1 cut(s) 700
PspN4I GGNNCC 6 cut(s) 223, 345, 357, 486, 699, 1254
PspPI GGNCC 3 cut(s) 221, 484, 1252
PstNI CAGNNNCTG 1 cut(s) 694
PsuI RGATCY 1 cut(s) 343
RsaI GTAC 5 cut(s) 113, 204, 548, 975, 1008
RsaNI GTAC 5 cut(s) 112, 203, 547, 974, 1007
SapI GCTCTTC 1 cut(s) 449
SaqAI TTAA 9 cut(s) 69, 560, 600, 765, 789, 912, 932, 1152, 1167
Sau3AI GATC 6 cut(s) 148, 253, 277, 343, 798, 997
Sau96I GGNCC 3 cut(s) 221, 484, 1252
ScaI AGTACT 2 cut(s) 204, 975
ScrFI CCNGG 1 cut(s) 702
SduI GDGCHC 1 cut(s) 583
SfaNI GCATC 2 cut(s) 824, 925
SfcI CTRYAG 1 cut(s) 540
Sfr274I CTCGAG 1 cut(s) 298
SinI GGWCC 2 cut(s) 221, 1252
SlaI CTCGAG 1 cut(s) 298
SmlI CTYRAG 6 cut(s) 298, 527, 569, 599, 632, 1151
SmoI CTYRAG 6 cut(s) 298, 527, 569, 599, 632, 1151
SpeI ACTAGT 2 cut(s) 266, 1192
Sse9I AATT 8 cut(s) 706, 715, 790, 886, 955, 1048, 1071, 1083
SspI AATATT 2 cut(s) 49, 190
SspMI CTAG 4 cut(s) 267, 968, 1112, 1193
StyD4I CCNGG 1 cut(s) 700
StyI CCWWGG 1 cut(s) 669
TaaI ACNGT 3 cut(s) 410, 541, 1165
TaiI ACGT 1 cut(s) 568
TaqI TCGA 7 cut(s) 65, 250, 280, 299, 327, 618, 751
TasI AATT 8 cut(s) 706, 715, 790, 886, 955, 1048, 1071, 1083
TatI WGTACW 4 cut(s) 202, 546, 973, 1006
TfiI GAWTC 1 cut(s) 286
Tru1I TTAA 9 cut(s) 69, 560, 600, 765, 789, 912, 932, 1152, 1167
Tru9I TTAA 9 cut(s) 69, 560, 600, 765, 789, 912, 932, 1152, 1167
TscAI CASTG 1 cut(s) 801
TseFI GTSAC 1 cut(s) 1075
Tsp45I GTSAC 1 cut(s) 1075
TspDTI ATGAA 4 cut(s) 281, 351, 380, 542
TspRI CASTG 1 cut(s) 801
Van91I CCANNNNNTGG 1 cut(s) 694
Vha464I CTTAAG 2 cut(s) 599, 1151
VneI GTGCAC 1 cut(s) 579
VpaK11BI GGWCC 2 cut(s) 221, 1252
VspI ATTAAT 1 cut(s) 789
XapI RAATTY 1 cut(s) 955
XbaI TCTAGA 1 cut(s) 967
XhoI CTCGAG 1 cut(s) 298
XmiI GTMKAC 1 cut(s) 904
XmnI GAANNNNTTC 1 cut(s) 48
XspI CTAG 4 cut(s) 267, 968, 1112, 1193
ZrmI AGTACT 2 cut(s) 204, 975
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.