Rroxscaffold_7G00172000

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000103
Physical Location & Seq
Reverse (-)
12324980 .. 12326807
1828 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00172000.1

Sequence Viewer

Length: 1266 bp
ATGGAAAATGAAAGAAAAAGAATGGAGCTGGAGTTGGATAGAATTAGCAACTTACCAAGTGATGTTACAGAAAAGATATTGTCACATTTGCCGATTAGGGATGCTGTGAGGACGAGTGTTTTATCAACTGAGTGGAGGTACAAATCGGCTATGCTACCGCGTCTGGTGTTTGATGCCAAGTCTATCTCAACTCAGCACCAAACATTTGCGAATGTTGTTGATCATGTACTCTTAAGTCACATCGGCCCCTTATACAAGTTCAAGATTGTTACACATATATCCTTTAGAGATATGGATCGGTGGATACTTCACTTGTCAAGAAACTCCATCAAAGAGTTCATACTCGAAAACTTGGGAGTGCAGCACTATAAGGTGCCTTCATCTATGTTTTCATGTCAAGATTTGACTTATCTAAAGTTGTTCACATGTTTGCTACAACCGCCGTCCACATTCACAGGCTTCAAAAGTTTGAAAAGGCTAAGAATTGCTGATGTTAGCCTGACGGATGATGTGCTTGAAAATATGATTGTTCACTGTCCTCTACTAGAGCGGTTGTCTGTGGAGTGGTGTGATGGTTTCAGCCAGCTCAATATCAATGCACCAAATCTCCAGGTTCTTCGCTTTATGGGTGCTTTTGAGGATATTAATATATTGAATACCTCAAATCTCGTTGATGTTTACATTTATAAGCAAGATGAGTTTGTCCAAAGACGGGGTCCTTGCAGATATAGTAATCTGCTCAAGTTTTTTGCTGAACTTCCCAATATTCACCGTCTTGACATGAACCACTTATTTACAAAGTATTTGGCTGTTGGCTCCTTGCCGGAAAAGCTGCCAAAACCATGTGTACATCTGCAATTTCTTTCTGCAAGTGTCTGCATTGATGATGTTAAGCATATTATAACTTTTCTTTGCCTTCTGAGAATGTCCCCTGCTTTGGAAGAATTAGAAGTTTATGCTTTGTGCCACCAAAATTATAAGGCCGAAGTGGGAAAAGTGAACTCTTGGGTTGATGAAAACCAGAGTTGCTCGCTCACTCAGCTACGACATGTGAAAATACACTGCAACATTGCTGTAGACTTGATCAGATTTCTGCTTATAAGTTCACCTGCGCTCGAGACAATGACGATATATCATCAGTCCACCATTCCTCCTGCTGGTTATGATCTAGCAAAAAAGCTGCTCAGTTTTAGGCGTGCATCACTGAATTTAGAGATAATTCTAACTGATCTAAGAGGGGGTAGTATTTTGATATCAGAAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

421

Amino Acids

48.48

Weight (kDa)

7.62

Isoelectric Point (pI)

47.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 52 1.1e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 91 - 376 2.2e-14 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 98 - 318 1.3e-20 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 687, 902, 978, 1100
AarI CACCTGC 1 cut(s) 1117
Acc36I ACCTGC 1 cut(s) 1117
AccB1I GGYRCC 1 cut(s) 373
AccBSI CCGCTC 1 cut(s) 550
AccI GTMKAC 1 cut(s) 1077
AccII CGCG 1 cut(s) 160
AciI CCGC 3 cut(s) 158, 440, 550
AclWI GGATC 1 cut(s) 303
AcsI RAATTY 1 cut(s) 1207
AfaI GTAC 3 cut(s) 140, 228, 849
AfiI CCNNNNNNNGG 3 cut(s) 712, 937, 1157
AflII CTTAAG 1 cut(s) 232
AflIII ACRYGT 2 cut(s) 425, 1048
AgsI TTSAA 5 cut(s) 262, 463, 472, 518, 655
AjnI CCWGG 1 cut(s) 609
AluBI AGCT 5 cut(s) 28, 586, 832, 1042, 1180
AluI AGCT 5 cut(s) 28, 586, 832, 1042, 1180
Alw26I GTCTC 1 cut(s) 1112
AlwI GGATC 1 cut(s) 303
Ama87I CYCGRG 1 cut(s) 1115
AoxI GGCC 2 cut(s) 244, 981
ApeKI GCWGC 3 cut(s) 361, 832, 1180
ApoI RAATTY 1 cut(s) 1207
ArsI GACNNNNNNTTYG 2 cut(s) 700, 732
AseI ATTAAT 1 cut(s) 645
AspLEI GCGC 1 cut(s) 1114
AspS9I GGNCC 2 cut(s) 245, 716
AsuHPI GGTGA 2 cut(s) 761, 1098
AvaI CYCGRG 1 cut(s) 1115
AvaII GGWCC 1 cut(s) 716
BanI GGYRCC 1 cut(s) 373
BbvI GCAGC 3 cut(s) 373, 819, 1167
BccI CCATC 2 cut(s) 335, 566
BceAI ACGGC 1 cut(s) 427
BciT130I CCWGG 1 cut(s) 611
BciVI GTATCC 1 cut(s) 297
BclI TGATCA 2 cut(s) 220, 1083
BcoDI GTCTC 1 cut(s) 1112
BfaI CTAG 2 cut(s) 545, 1169
BfmI CTRYAG 1 cut(s) 1074
BfrI CTTAAG 1 cut(s) 232
BfuAI ACCTGC 1 cut(s) 1117
BfuI GTATCC 1 cut(s) 297
BisI GCNGC 3 cut(s) 362, 833, 1181
BlsI GCNGC 3 cut(s) 363, 834, 1182
Bme1390I CCNGG 1 cut(s) 611
Bme18I GGWCC 1 cut(s) 716
BmeT110I CYCGRG 1 cut(s) 1115
BmgT120I GGNCC 2 cut(s) 245, 716
BmiI GGNNCC 4 cut(s) 247, 375, 717, 817
BmrFI CCNGG 1 cut(s) 611
BmsI GCATC 3 cut(s) 91, 163, 1208
BpmI CTGGAG 2 cut(s) 50, 593
BpuEI CTTGAG 1 cut(s) 725
BsaBI GATNNNNATC 1 cut(s) 294
BsaXI ACNNNNNCTCC 6 cut(s) 17, 47, 591, 621, 1135, 1165
Bsc4I CCNNNNNNNGG 3 cut(s) 712, 937, 1157
Bse3DI GCAATG 1 cut(s) 1068
Bse8I GATNNNNATC 1 cut(s) 294
BseBI CCWGG 1 cut(s) 611
BseGI GGATG 2 cut(s) 106, 511
BseJI GATNNNNATC 1 cut(s) 294
BseLI CCNNNNNNNGG 3 cut(s) 712, 937, 1157
BseMI GCAATG 1 cut(s) 1068
BseMII CTCAG 5 cut(s) 120, 206, 911, 1052, 1198
BseXI GCAGC 3 cut(s) 373, 819, 1167
BsgI GTGCAG 1 cut(s) 380
Bsh1236I CGCG 1 cut(s) 160
BshFI GGCC 2 cut(s) 246, 983
BshNI GGYRCC 1 cut(s) 373
BsiHKCI CYCGRG 1 cut(s) 1115
BsiSI CCGG 1 cut(s) 824
BslFI GGGAC 1 cut(s) 913
BslI CCNNNNNNNGG 3 cut(s) 712, 937, 1157
BsmAI GTCTC 1 cut(s) 1112
BsmFI GGGAC 1 cut(s) 913
BsnI GGCC 2 cut(s) 246, 983
BsoBI CYCGRG 1 cut(s) 1115
Bsp1407I TGTACA 1 cut(s) 847
Bsp143I GATC 5 cut(s) 220, 295, 1083, 1165, 1228
BspACI CCGC 3 cut(s) 158, 440, 550
BspANI GGCC 2 cut(s) 246, 983
BspCNI CTCAG 5 cut(s) 121, 205, 912, 1051, 1197
BspFNI CGCG 1 cut(s) 160
BspLI GGNNCC 4 cut(s) 247, 375, 717, 817
BspMI ACCTGC 1 cut(s) 1117
BspPI GGATC 1 cut(s) 303
BspT107I GGYRCC 1 cut(s) 373
BspTI CTTAAG 1 cut(s) 232
BsrBI CCGCTC 1 cut(s) 550
BsrDI GCAATG 1 cut(s) 1068
BsrGI TGTACA 1 cut(s) 847
BssMI GATC 5 cut(s) 220, 295, 1083, 1165, 1228
Bst2UI CCWGG 1 cut(s) 611
Bst4CI ACNGT 2 cut(s) 536, 773
BstAFI CTTAAG 1 cut(s) 232
BstAUI TGTACA 1 cut(s) 847
BstC8I GCNNGC 3 cut(s) 584, 1031, 1197
BstDEI CTNAG 7 cut(s) 129, 192, 479, 920, 1038, 1184, 1232
BstF5I GGATG 2 cut(s) 106, 511
BstFNI CGCG 1 cut(s) 160
BstHHI GCGC 1 cut(s) 1114
BstKTI GATC 5 cut(s) 223, 298, 1086, 1168, 1231
BstMAI GTCTC 1 cut(s) 1112
BstMBI GATC 5 cut(s) 220, 295, 1083, 1165, 1228
BstMWI GCNNNNNNNGC 3 cut(s) 439, 829, 1039
BstNI CCWGG 1 cut(s) 611
BstNSI RCATGY 2 cut(s) 429, 1052
BstSCI CCNGG 1 cut(s) 609
BstSFI CTRYAG 1 cut(s) 1074
BstUI CGCG 1 cut(s) 160
BstV1I GCAGC 3 cut(s) 373, 819, 1167
BsuI GTATCC 1 cut(s) 297
BsuRI GGCC 2 cut(s) 246, 983
BtsCI GGATG 2 cut(s) 106, 511
BtsI GCAGTG 1 cut(s) 1060
BtsIMutI CAGTG 3 cut(s) 532, 1060, 1202
BveI ACCTGC 1 cut(s) 1117
Cac8I GCNNGC 3 cut(s) 584, 1031, 1197
CfoI GCGC 1 cut(s) 1114
Cfr13I GGNCC 2 cut(s) 245, 716
CseI GACGC 1 cut(s) 149
Csp6I GTAC 3 cut(s) 139, 227, 848
CviAII CATG 6 cut(s) 224, 393, 426, 781, 843, 1049
CviQI GTAC 3 cut(s) 139, 227, 848
DdeI CTNAG 7 cut(s) 129, 192, 479, 920, 1038, 1184, 1232
DpnI GATC 5 cut(s) 222, 297, 1085, 1167, 1230
DpnII GATC 5 cut(s) 220, 295, 1083, 1165, 1228
Eco32I GATATC 1 cut(s) 1254
Eco47I GGWCC 1 cut(s) 716
Eco88I CYCGRG 1 cut(s) 1115
EcoO109I RGGNCCY 1 cut(s) 716
EcoRII CCWGG 1 cut(s) 609
EcoRV GATATC 1 cut(s) 1254
FaeI CATG 6 cut(s) 227, 396, 429, 784, 846, 1052
FaqI GGGAC 1 cut(s) 913
FatI CATG 6 cut(s) 223, 392, 425, 780, 842, 1048
FbaI TGATCA 2 cut(s) 220, 1083
FblI GTMKAC 1 cut(s) 1077
Fnu4HI GCNGC 3 cut(s) 362, 833, 1181
FokI GGATG 2 cut(s) 113, 518
Fsp4HI GCNGC 3 cut(s) 362, 833, 1181
FspBI CTAG 2 cut(s) 545, 1169
GlaI GCGC 1 cut(s) 1113
GluI GCNGC 3 cut(s) 362, 833, 1181
GsuI CTGGAG 2 cut(s) 50, 593
HaeIII GGCC 2 cut(s) 246, 983
HapII CCGG 1 cut(s) 824
HgaI GACGC 1 cut(s) 149
HhaI GCGC 1 cut(s) 1114
Hin1II CATG 6 cut(s) 227, 396, 429, 784, 846, 1052
Hin6I GCGC 1 cut(s) 1112
HinP1I GCGC 1 cut(s) 1112
HpaII CCGG 1 cut(s) 824
HphI GGTGA 2 cut(s) 761, 1098
Hpy166II GTNNAC 9 cut(s) 423, 447, 532, 679, 848, 1000, 1078, 1106, 1143
Hpy188I TCNGA 3 cut(s) 921, 1088, 1258
Hpy188III TCNNGA 5 cut(s) 262, 318, 398, 776, 1117
Hpy8I GTNNAC 9 cut(s) 423, 447, 532, 679, 848, 1000, 1078, 1106, 1143
HpyAV CCTTC 2 cut(s) 387, 926
HpyCH4III ACNGT 2 cut(s) 536, 773
HpyCH4V TGCA 8 cut(s) 361, 599, 723, 856, 869, 879, 1065, 1199
HpyF10VI GCNNNNNNNGC 3 cut(s) 439, 829, 1039
HpyF3I CTNAG 7 cut(s) 129, 192, 479, 920, 1038, 1184, 1232
Hsp92II CATG 6 cut(s) 227, 396, 429, 784, 846, 1052
HspAI GCGC 1 cut(s) 1112
Ksp22I TGATCA 2 cut(s) 220, 1083
Kzo9I GATC 5 cut(s) 220, 295, 1083, 1165, 1228
LmnI GCTCC 2 cut(s) 25, 821
Lsp1109I GCAGC 3 cut(s) 373, 819, 1167
LweI GCATC 3 cut(s) 91, 163, 1208
MaeI CTAG 2 cut(s) 545, 1169
MaeIII GTNAC 4 cut(s) 64, 81, 236, 268
MalI GATC 5 cut(s) 222, 297, 1085, 1167, 1230
MbiI CCGCTC 1 cut(s) 550
MboI GATC 5 cut(s) 220, 295, 1083, 1165, 1228
MboII GAAGA 2 cut(s) 608, 953
MluCI AATT 7 cut(s) 42, 483, 857, 944, 973, 1207, 1218
MmeI TCCRAC 1 cut(s) 15
MnlI CCTC 7 cut(s) 102, 129, 549, 631, 670, 1161, 1229
MseI TTAA 3 cut(s) 233, 645, 891
MspCI CTTAAG 1 cut(s) 232
MspI CCGG 1 cut(s) 824
MspR9I CCNGG 1 cut(s) 611
MvaI CCWGG 1 cut(s) 611
MvnI CGCG 1 cut(s) 160
MwoI GCNNNNNNNGC 3 cut(s) 439, 829, 1039
NdeII GATC 5 cut(s) 220, 295, 1083, 1165, 1228
NlaIII CATG 6 cut(s) 227, 396, 429, 784, 846, 1052
NlaIV GGNNCC 4 cut(s) 247, 375, 717, 817
NmuCI GTSAC 2 cut(s) 81, 236
NspI RCATGY 2 cut(s) 429, 1052
PaeR7I CTCGAG 1 cut(s) 1115
PaqCI CACCTGC 1 cut(s) 1117
PciI ACATGT 2 cut(s) 425, 1048
PflFI GACNNNGTC 1 cut(s) 714
PkrI GCNGC 3 cut(s) 363, 834, 1182
PpuMI RGGWCCY 1 cut(s) 716
PscI ACATGT 2 cut(s) 425, 1048
PshBI ATTAAT 1 cut(s) 645
PsiI TTATAA 4 cut(s) 687, 902, 978, 1100
Psp5II RGGWCCY 1 cut(s) 716
Psp6I CCWGG 1 cut(s) 609
PspGI CCWGG 1 cut(s) 609
PspN4I GGNNCC 4 cut(s) 247, 375, 717, 817
PspPI GGNCC 2 cut(s) 245, 716
PspPPI RGGWCCY 1 cut(s) 716
PsyI GACNNNGTC 1 cut(s) 714
RsaI GTAC 3 cut(s) 140, 228, 849
RsaNI GTAC 3 cut(s) 139, 227, 848
SaqAI TTAA 3 cut(s) 233, 645, 891
SatI GCNGC 3 cut(s) 362, 833, 1181
Sau3AI GATC 5 cut(s) 220, 295, 1083, 1165, 1228
Sau96I GGNCC 2 cut(s) 245, 716
ScrFI CCNGG 1 cut(s) 611
SfaNI GCATC 3 cut(s) 91, 163, 1208
SfcI CTRYAG 1 cut(s) 1074
Sfr274I CTCGAG 1 cut(s) 1115
SinI GGWCC 1 cut(s) 716
SlaI CTCGAG 1 cut(s) 1115
SmlI CTYRAG 3 cut(s) 232, 740, 1115
SmoI CTYRAG 3 cut(s) 232, 740, 1115
Sse9I AATT 7 cut(s) 42, 483, 857, 944, 973, 1207, 1218
SsiI CCGC 3 cut(s) 158, 440, 550
SspI AATATT 1 cut(s) 766
SspMI CTAG 2 cut(s) 545, 1169
StyD4I CCNGG 1 cut(s) 609
TaaI ACNGT 2 cut(s) 536, 773
TaqI TCGA 2 cut(s) 345, 1116
TasI AATT 7 cut(s) 42, 483, 857, 944, 973, 1207, 1218
TatI WGTACW 2 cut(s) 226, 847
Tru1I TTAA 3 cut(s) 233, 645, 891
Tru9I TTAA 3 cut(s) 233, 645, 891
TscAI CASTG 3 cut(s) 539, 1067, 1209
TseFI GTSAC 2 cut(s) 81, 236
TseI GCWGC 3 cut(s) 361, 832, 1180
Tsp45I GTSAC 2 cut(s) 81, 236
TspDTI ATGAA 6 cut(s) 24, 328, 369, 381, 797, 1029
TspGWI ACGGA 1 cut(s) 518
TspRI CASTG 3 cut(s) 539, 1067, 1209
Tth111I GACNNNGTC 1 cut(s) 714
Vha464I CTTAAG 1 cut(s) 232
VpaK11BI GGWCC 1 cut(s) 716
VspI ATTAAT 1 cut(s) 645
XapI RAATTY 1 cut(s) 1207
XceI RCATGY 2 cut(s) 429, 1052
XhoI CTCGAG 1 cut(s) 1115
XmiI GTMKAC 1 cut(s) 1077
XspI CTAG 2 cut(s) 545, 1169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.