Rw6G032210

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000103
Physical Location & Seq
Forward (+)
56285586 .. 56286945
1360 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G032210.1

Sequence Viewer

Length: 1227 bp
ATGGAGTTGGATAGAATAAGCAACTTACCAAGTGATGTTACGGAAAAGATATTGTTATGCTTGCCAATTAGGGATGCAGTGAGGACGAGTGTTTTATCAACTACGTGGAGGTACAAATCGGCTATGCTACCACATCTGGTGTTTGATCCCCAGTCTATCTCAACTCAGCACCAAACATTTGCTAATGCTGTTGATCATTTACTCTTAACTCACTTTGGCCCCGTATACAAGTTCAAGCTTGCTCGAGAACATGTATCCTTTAGAGATATCGATCGGTGGATACTTTACGCGTCAAGAAACTCCATCAAAGAGTTCATACTTGAAATCTTGGGACGGCAGCGCTATAAGGTGCCTTCATCTATGTTTTCATGTCAAGATTTGACTTATTTAGAGTTGCATAGATGTTTGCTACAACCGCCGTCCACATTCACAGGCTTCAAAAGTTTGAAAAGCCTAAAAATTGTTCGTGTTACTCTGACGGATGATGTGCTGGAAAATGTGATTGTTCGCTGTCCTCTACTTGAGCGGTTGACTGTGGAGTGGTGCTATGATTTCAGCCAGCTCAATATCAATGCACCAAATCTCCAGGTTCTTCGCTTTATGGGTGATTTTGAGGATGTTAATATATTAAATACCTCAAATCTCGTTGATGTTTTCATTTGGCTACGCAAGTTTGATCATAGACGGGGTCCTTGCAGATCTAGTAATCTGCTCAAGTTATTTGCTCAACTTCCCAATATTCACCGTCTTTACATGAACTCCAAATTTACAAAGTATTTGGCTGCTGGCTCCTTGCTGGAAAAGCTGCCTAAACCGTGTTTACATCTGCAATTTCTTATTGTAAGAGTAGGGATTGATGATGTTAAGGATATTATAACTGTTATTTGCCTTCTGAGAATCTCCCCTGCTCTGGAAGAATTAGAAGTTTTTGCCTTTTGCCGCCAAACATATGAAGCCGAAGTGGGAAAAGTGAACTCTTGGGTTGATGACAACCAGAGTTGCTCGTTCACTCAGCTGCGACGTGTGAAAATACACTGCTCTCAGGCTGTTGAAGGTGCACTAGATTTGATCAGATTTCTGCTTTTAAGTTCACCTGCACTTGAGACAATGACGGTATATAAACATCCTTCCACTCCACTTGATGGTTATGATCTAGCAAAAAAGTTACTCCGGTTTAGGCGTGCATCACTGAATTTAGAGATAATTCTAAGTGATCTAGCAGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

408

Amino Acids

47.05

Weight (kDa)

8.79

Isoelectric Point (pI)

43.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 39 1e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 82 - 190 6.5e-14 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 90 - 309 5.5e-21 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 177 - 372 2.6e-08 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 875
AarI CACCTGC 1 cut(s) 1102
Acc36I ACCTGC 1 cut(s) 1102
AccB1I GGYRCC 1 cut(s) 349
AccB7I CCANNNNNTGG 1 cut(s) 1142
AccBSI CCGCTC 1 cut(s) 526
AccI GTMKAC 1 cut(s) 225
AccII CGCG 1 cut(s) 290
AciI CCGC 3 cut(s) 416, 526, 940
AclWI GGATC 1 cut(s) 140
AcsI RAATTY 2 cut(s) 764, 1192
AfaI GTAC 1 cut(s) 113
AfeI AGCGCT 1 cut(s) 341
AfiI CCNNNNNNNGG 2 cut(s) 910, 1142
AflIII ACRYGT 3 cut(s) 250, 288, 1021
AgsI TTSAA 5 cut(s) 235, 323, 439, 448, 1052
AjiI CACGTC 1 cut(s) 1022
AjnI CCWGG 1 cut(s) 585
AluBI AGCT 4 cut(s) 238, 562, 805, 1015
AluI AGCT 4 cut(s) 238, 562, 805, 1015
Alw21I GWGCWC 1 cut(s) 1060
Alw26I GTCTC 1 cut(s) 1097
Alw44I GTGCAC 1 cut(s) 1056
AlwI GGATC 1 cut(s) 140
Ama87I CYCGRG 1 cut(s) 243
Aor51HI AGCGCT 1 cut(s) 341
AoxI GGCC 1 cut(s) 217
ApaLI GTGCAC 1 cut(s) 1056
ApeKI GCWGC 4 cut(s) 337, 782, 805, 1015
ApoI RAATTY 2 cut(s) 764, 1192
AspLEI GCGC 1 cut(s) 342
AspS9I GGNCC 2 cut(s) 218, 689
AsuHPI GGTGA 3 cut(s) 617, 734, 1083
AvaI CYCGRG 1 cut(s) 243
AvaII GGWCC 1 cut(s) 689
BaeGI GKGCMC 1 cut(s) 1060
BanI GGYRCC 1 cut(s) 349
Bbv12I GWGCWC 1 cut(s) 1060
BbvI GCAGC 4 cut(s) 349, 769, 792, 1002
BccI CCATC 2 cut(s) 311, 1136
BceAI ACGGC 2 cut(s) 350, 403
BciT130I CCWGG 1 cut(s) 587
BciVI GTATCC 2 cut(s) 265, 273
BclI TGATCA 3 cut(s) 193, 676, 1068
BcoDI GTCTC 1 cut(s) 1097
BfaI CTAG 4 cut(s) 702, 1061, 1154, 1217
BfoI RGCGCY 1 cut(s) 343
BfuAI ACCTGC 1 cut(s) 1102
BfuI GTATCC 2 cut(s) 265, 273
BglII AGATCT 1 cut(s) 698
BisI GCNGC 5 cut(s) 338, 783, 806, 940, 1016
BlsI GCNGC 5 cut(s) 339, 784, 807, 941, 1017
Bme1390I CCNGG 1 cut(s) 587
Bme18I GGWCC 1 cut(s) 689
BmeT110I CYCGRG 1 cut(s) 243
BmgBI CACGTC 1 cut(s) 1022
BmgT120I GGNCC 2 cut(s) 218, 689
BmiI GGNNCC 4 cut(s) 220, 351, 690, 790
BmrFI CCNGG 1 cut(s) 587
BmrI ACTGGG 1 cut(s) 145
BmsI GCATC 2 cut(s) 64, 1193
BmuI ACTGGG 1 cut(s) 145
BpmI CTGGAG 1 cut(s) 569
BpuEI CTTGAG 3 cut(s) 542, 698, 1121
Bsa29I ATCGAT 1 cut(s) 270
BsaAI YACGTR 1 cut(s) 105
BsaBI GATNNNNATC 1 cut(s) 270
BsaWI WCCGGW 1 cut(s) 1170
BsaXI ACNNNNNCTCC 4 cut(s) 567, 597, 743, 773
Bsc4I CCNNNNNNNGG 2 cut(s) 910, 1142
Bse1I ACTGG 1 cut(s) 151
Bse8I GATNNNNATC 1 cut(s) 270
BseBI CCWGG 1 cut(s) 587
BseCI ATCGAT 1 cut(s) 270
BseGI GGATG 4 cut(s) 79, 487, 622, 1123
BseJI GATNNNNATC 1 cut(s) 270
BseLI CCNNNNNNNGG 2 cut(s) 910, 1142
BseMII CTCAG 4 cut(s) 179, 884, 1025, 1055
BseNI ACTGG 1 cut(s) 151
BseSI GKGCMC 1 cut(s) 1060
BseXI GCAGC 4 cut(s) 349, 769, 792, 1002
BsgI GTGCAG 1 cut(s) 1080
Bsh1236I CGCG 1 cut(s) 290
Bsh1285I CGRYCG 1 cut(s) 274
BshFI GGCC 1 cut(s) 219
BshNI GGYRCC 1 cut(s) 349
BshVI ATCGAT 1 cut(s) 270
BsiEI CGRYCG 1 cut(s) 274
BsiHKAI GWGCWC 1 cut(s) 1060
BsiHKCI CYCGRG 1 cut(s) 243
BsiSI CCGG 1 cut(s) 1171
BslFI GGGAC 1 cut(s) 345
BslI CCNNNNNNNGG 2 cut(s) 910, 1142
BsmAI GTCTC 1 cut(s) 1097
BsmFI GGGAC 1 cut(s) 345
BsnI GGCC 1 cut(s) 219
BsoBI CYCGRG 1 cut(s) 243
Bsp1286I GDGCHC 1 cut(s) 1060
Bsp143I GATC 8 cut(s) 145, 193, 271, 676, 698, 1068, 1150, 1213
BspACI CCGC 3 cut(s) 416, 526, 940
BspANI GGCC 1 cut(s) 219
BspCNI CTCAG 4 cut(s) 178, 885, 1024, 1054
BspDI ATCGAT 1 cut(s) 270
BspFNI CGCG 1 cut(s) 290
BspLI GGNNCC 4 cut(s) 220, 351, 690, 790
BspMI ACCTGC 1 cut(s) 1102
BspPI GGATC 1 cut(s) 140
BspT107I GGYRCC 1 cut(s) 349
BsrBI CCGCTC 1 cut(s) 526
BsrI ACTGG 1 cut(s) 151
BssMI GATC 8 cut(s) 145, 193, 271, 676, 698, 1068, 1150, 1213
BssNAI GTATAC 1 cut(s) 226
Bst1107I GTATAC 1 cut(s) 226
Bst2UI CCWGG 1 cut(s) 587
Bst4CI ACNGT 5 cut(s) 535, 746, 816, 880, 1114
BstBAI YACGTR 1 cut(s) 105
BstC8I GCNNGC 5 cut(s) 62, 240, 560, 787, 1182
BstDEI CTNAG 5 cut(s) 165, 893, 1011, 1041, 1208
BstF5I GGATG 4 cut(s) 79, 487, 622, 1123
BstFNI CGCG 1 cut(s) 290
BstH2I RGCGCY 1 cut(s) 343
BstHHI GCGC 1 cut(s) 342
BstKTI GATC 8 cut(s) 148, 196, 274, 679, 701, 1071, 1153, 1216
BstMAI GTCTC 1 cut(s) 1097
BstMBI GATC 8 cut(s) 145, 193, 271, 676, 698, 1068, 1150, 1213
BstMCI CGRYCG 1 cut(s) 274
BstMWI GCNNNNNNNGC 2 cut(s) 415, 802
BstNI CCWGG 1 cut(s) 587
BstNSI RCATGY 1 cut(s) 254
BstSCI CCNGG 1 cut(s) 585
BstSLI GKGCMC 1 cut(s) 1060
BstUI CGCG 1 cut(s) 290
BstV1I GCAGC 4 cut(s) 349, 769, 792, 1002
BstX2I RGATCY 1 cut(s) 698
BstYI RGATCY 1 cut(s) 698
BstZ17I GTATAC 1 cut(s) 226
Bsu15I ATCGAT 1 cut(s) 270
BsuI GTATCC 2 cut(s) 265, 273
BsuRI GGCC 1 cut(s) 219
BsuTUI ATCGAT 1 cut(s) 270
BtrI CACGTC 1 cut(s) 1022
BtsCI GGATG 4 cut(s) 79, 487, 622, 1123
BtsI GCAGTG 2 cut(s) 84, 1033
BtsIMutI CAGTG 3 cut(s) 84, 1033, 1187
BveI ACCTGC 1 cut(s) 1102
Cac8I GCNNGC 5 cut(s) 62, 240, 560, 787, 1182
CfoI GCGC 1 cut(s) 342
Cfr13I GGNCC 2 cut(s) 218, 689
ClaI ATCGAT 1 cut(s) 270
CseI GACGC 1 cut(s) 279
Csp6I GTAC 1 cut(s) 112
CspCI CAANNNNNGTGG 2 cut(s) 1120, 1155
CviAII CATG 3 cut(s) 251, 369, 754
CviQI GTAC 1 cut(s) 112
DdeI CTNAG 5 cut(s) 165, 893, 1011, 1041, 1208
DpnI GATC 8 cut(s) 147, 195, 273, 678, 700, 1070, 1152, 1215
DpnII GATC 8 cut(s) 145, 193, 271, 676, 698, 1068, 1150, 1213
Eco32I GATATC 1 cut(s) 268
Eco47I GGWCC 1 cut(s) 689
Eco47III AGCGCT 1 cut(s) 341
Eco88I CYCGRG 1 cut(s) 243
EcoO109I RGGNCCY 1 cut(s) 689
EcoRII CCWGG 1 cut(s) 585
EcoRV GATATC 1 cut(s) 268
FaeI CATG 3 cut(s) 254, 372, 757
FaqI GGGAC 1 cut(s) 345
FatI CATG 3 cut(s) 250, 368, 753
FauNDI CATATG 1 cut(s) 949
FbaI TGATCA 3 cut(s) 193, 676, 1068
FblI GTMKAC 1 cut(s) 225
Fnu4HI GCNGC 5 cut(s) 338, 783, 806, 940, 1016
FokI GGATG 4 cut(s) 86, 494, 629, 1110
Fsp4HI GCNGC 5 cut(s) 338, 783, 806, 940, 1016
FspBI CTAG 4 cut(s) 702, 1061, 1154, 1217
GlaI GCGC 1 cut(s) 341
GluI GCNGC 5 cut(s) 338, 783, 806, 940, 1016
GsuI CTGGAG 1 cut(s) 569
HaeII RGCGCY 1 cut(s) 343
HaeIII GGCC 1 cut(s) 219
HapII CCGG 1 cut(s) 1171
HgaI GACGC 1 cut(s) 279
HhaI GCGC 1 cut(s) 342
Hin1II CATG 3 cut(s) 254, 372, 757
Hin6I GCGC 1 cut(s) 340
HinP1I GCGC 1 cut(s) 340
HincII GTYRAC 1 cut(s) 531
HindII GTYRAC 1 cut(s) 531
HindIII AAGCTT 1 cut(s) 236
HinfI GANTC 1 cut(s) 897
HpaII CCGG 1 cut(s) 1171
HphI GGTGA 3 cut(s) 617, 734, 1083
Hpy166II GTNNAC 8 cut(s) 226, 423, 531, 821, 973, 1008, 1058, 1091
Hpy188I TCNGA 3 cut(s) 477, 894, 1073
Hpy188III TCNNGA 4 cut(s) 245, 294, 374, 911
Hpy8I GTNNAC 8 cut(s) 226, 423, 531, 821, 973, 1008, 1058, 1091
Hpy99I CGWCG 1 cut(s) 1023
HpyAV CCTTC 4 cut(s) 363, 899, 1046, 1137
HpyCH4III ACNGT 5 cut(s) 535, 746, 816, 880, 1114
HpyCH4IV ACGT 2 cut(s) 104, 1021
HpyCH4V TGCA 8 cut(s) 77, 397, 575, 696, 829, 1058, 1097, 1184
HpyF10VI GCNNNNNNNGC 2 cut(s) 415, 802
HpyF3I CTNAG 5 cut(s) 165, 893, 1011, 1041, 1208
HpySE526I ACGT 2 cut(s) 104, 1021
Hsp92II CATG 3 cut(s) 254, 372, 757
HspAI GCGC 1 cut(s) 340
Ksp22I TGATCA 3 cut(s) 193, 676, 1068
Kzo9I GATC 8 cut(s) 145, 193, 271, 676, 698, 1068, 1150, 1213
LmnI GCTCC 1 cut(s) 794
Lsp1109I GCAGC 4 cut(s) 349, 769, 792, 1002
LweI GCATC 2 cut(s) 64, 1193
MaeI CTAG 4 cut(s) 702, 1061, 1154, 1217
MaeII ACGT 2 cut(s) 104, 1021
MaeIII GTNAC 3 cut(s) 37, 469, 1164
MalI GATC 8 cut(s) 147, 195, 273, 678, 700, 1070, 1152, 1215
MbiI CCGCTC 1 cut(s) 526
MboI GATC 8 cut(s) 145, 193, 271, 676, 698, 1068, 1150, 1213
MboII GAAGA 2 cut(s) 584, 926
MflI RGATCY 1 cut(s) 698
MhlI GDGCHC 1 cut(s) 1060
MluCI AATT 7 cut(s) 66, 459, 764, 830, 917, 1192, 1203
MluI ACGCGT 1 cut(s) 288
MnlI CCTC 5 cut(s) 75, 102, 525, 607, 646
MseI TTAA 5 cut(s) 206, 621, 629, 864, 1085
MspA1I CMGCKG 1 cut(s) 1015
MspI CCGG 1 cut(s) 1171
MspR9I CCNGG 1 cut(s) 587
MvaI CCWGG 1 cut(s) 587
MvnI CGCG 1 cut(s) 290
MwoI GCNNNNNNNGC 2 cut(s) 415, 802
NdeI CATATG 1 cut(s) 949
NdeII GATC 8 cut(s) 145, 193, 271, 676, 698, 1068, 1150, 1213
NlaIII CATG 3 cut(s) 254, 372, 757
NlaIV GGNNCC 4 cut(s) 220, 351, 690, 790
NspI RCATGY 1 cut(s) 254
PaeR7I CTCGAG 1 cut(s) 243
PaqCI CACCTGC 1 cut(s) 1102
PciI ACATGT 1 cut(s) 250
PfeI GAWTC 1 cut(s) 897
PflFI GACNNNGTC 1 cut(s) 687
PflMI CCANNNNNTGG 1 cut(s) 1142
PkrI GCNGC 5 cut(s) 339, 784, 807, 941, 1017
Ple19I CGATCG 1 cut(s) 274
Ppu21I YACGTR 1 cut(s) 105
PpuMI RGGWCCY 1 cut(s) 689
PscI ACATGT 1 cut(s) 250
PsiI TTATAA 1 cut(s) 875
Psp5II RGGWCCY 1 cut(s) 689
Psp6I CCWGG 1 cut(s) 585
PspGI CCWGG 1 cut(s) 585
PspN4I GGNNCC 4 cut(s) 220, 351, 690, 790
PspPI GGNCC 2 cut(s) 218, 689
PspPPI RGGWCCY 1 cut(s) 689
PsuI RGATCY 1 cut(s) 698
PsyI GACNNNGTC 1 cut(s) 687
PvuI CGATCG 1 cut(s) 274
PvuII CAGCTG 1 cut(s) 1015
RsaI GTAC 1 cut(s) 113
RsaNI GTAC 1 cut(s) 112
SaqAI TTAA 5 cut(s) 206, 621, 629, 864, 1085
SatI GCNGC 5 cut(s) 338, 783, 806, 940, 1016
Sau3AI GATC 8 cut(s) 145, 193, 271, 676, 698, 1068, 1150, 1213
Sau96I GGNCC 2 cut(s) 218, 689
ScrFI CCNGG 1 cut(s) 587
SduI GDGCHC 1 cut(s) 1060
SfaNI GCATC 2 cut(s) 64, 1193
Sfr274I CTCGAG 1 cut(s) 243
SinI GGWCC 1 cut(s) 689
SlaI CTCGAG 1 cut(s) 243
SmlI CTYRAG 4 cut(s) 243, 521, 713, 1100
SmoI CTYRAG 4 cut(s) 243, 521, 713, 1100
Sse9I AATT 7 cut(s) 66, 459, 764, 830, 917, 1192, 1203
SsiI CCGC 3 cut(s) 416, 526, 940
SspI AATATT 1 cut(s) 739
SspMI CTAG 4 cut(s) 702, 1061, 1154, 1217
StyD4I CCNGG 1 cut(s) 585
TaaI ACNGT 5 cut(s) 535, 746, 816, 880, 1114
TaiI ACGT 2 cut(s) 107, 1024
TaqI TCGA 2 cut(s) 244, 270
TasI AATT 7 cut(s) 66, 459, 764, 830, 917, 1192, 1203
TauI GCSGC 1 cut(s) 942
TfiI GAWTC 1 cut(s) 897
Tru1I TTAA 5 cut(s) 206, 621, 629, 864, 1085
Tru9I TTAA 5 cut(s) 206, 621, 629, 864, 1085
TscAI CASTG 3 cut(s) 84, 1040, 1194
TseI GCWGC 4 cut(s) 337, 782, 805, 1015
TspDTI ATGAA 6 cut(s) 304, 345, 357, 646, 770, 966
TspGWI ACGGA 2 cut(s) 56, 494
TspRI CASTG 3 cut(s) 84, 1040, 1194
Tth111I GACNNNGTC 1 cut(s) 687
Van91I CCANNNNNTGG 1 cut(s) 1142
VneI GTGCAC 1 cut(s) 1056
VpaK11BI GGWCC 1 cut(s) 689
XapI RAATTY 2 cut(s) 764, 1192
XceI RCATGY 1 cut(s) 254
XhoI CTCGAG 1 cut(s) 243
XmiI GTMKAC 1 cut(s) 225
XspI CTAG 4 cut(s) 702, 1061, 1154, 1217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.