RchiOBHm_Chr6g0252081

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000103
Physical Location & Seq
Forward (+)
7286975 .. 7288515
1541 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ22599

Sequence Viewer

Length: 1152 bp
ATGCTTCCAGATCTAGAATTTGATGAATTTGACTGGAGGGAAAGAACAAATCGAGAGTTTGTGAACATGATTGATCATGTGCTCTTAGTTCATATTGTCCCCATACGCAAGTTCATACTACGCTGTACTATGAATCAGGTAGCCCCGAGAGATATTGATCGATGGATTACTCATCTATCAAGAAACTCTATCAAAGAGTTGATAATTAATCTTTGGATAGTCCAGGAATATAACATTCCATTCTCTCTGTTTTCATGTCAAGGTCTTGTTCGTTTGGAGTTACTCGAGTGTTTGCTCAAACCTCCGTCAACATTCAAAGGGTTCAAGAGCTTGAAGAGTCTTCAACTCCATCATGTCGGCATGGCCCAAGATGCGTTTGAAAATTTGATTCGTTGCAGTCCTCTGCTCGAGAGATTAACATTGCTAAGTTGTGACGGTGTCACCGGTCTCAGAATTGATGCACCCAATCTCCAATATTTGGAAGTTTTAGGTGAGTTTGATGTCGTTAACCTTGACAGTGCCTCAAGTATTACTGAGGCTGAAATTTGGATGGGCATCGGTAATGACCCAATAGGAGTTCCAGCCGGTTGGATTCCTGCCTGCAGTTCTAGCAATTTGCTCATGATCTTTGATCACCTACCTCACATTCGAAGGCTTGAAATTAGGAGGCACTTTTTAGATTATTTGTCTCTGGGCGCCTTGCCAGAAAAGCTCACTAAACCATGTCAACATCTGAAGGCTCTTTCTATAGACATATGCTTCGATGATCCGGATGCAATTCCAACTGCTCTATGCCTTCTGAGAAGCTCCCCTGCTCTACAAGAACTAGAAATTTTTGTGGATCAGAGAAAGAAACTCCCAAGGATACACTCTATTGTTGAAGAACTGAACTCTCCTTGTGTGAATGACAACTACAATTGCACATTTTCTCAACTGCGACTTGTGAAAATAACTGAGATCTCTGGTGTTAAAGCTGAACTAGATTTCATCAGATTTCTACTTTTAAGTTCACCTTTGCTTGAGAGAATGACTGTCATGCCTGGTAGATTTCCCGAGCCTTCTTATGCGGATGGTTTTCCGAAACTAGTAAAAGAGCTACTCCAGTTTAAACGTGAATCAAAGCATGCAGAGATAATTCTCCTGGACCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

383

Amino Acids

43.9

Weight (kDa)

5.71

Isoelectric Point (pI)

54.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 41 - 345 1.6e-20 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 52 - 278 1.5e-20 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 695
AccB7I CCANNNNNTGG 1 cut(s) 478
AccIII TCCGGA 1 cut(s) 769
AciI CCGC 1 cut(s) 1067
AclWI GGATC 2 cut(s) 761, 849
AcsI RAATTY 5 cut(s) 17, 26, 382, 543, 831
AcuI CTGAAG 1 cut(s) 755
AcyI GRCGYC 1 cut(s) 696
AfaI GTAC 1 cut(s) 127
AfiI CCNNNNNNNGG 1 cut(s) 478
AgeI ACCGGT 1 cut(s) 443
AgsI TTSAA 7 cut(s) 316, 325, 334, 344, 380, 659, 881
AhlI ACTAGT 1 cut(s) 1084
AjnI CCWGG 3 cut(s) 222, 1039, 1140
AluBI AGCT 5 cut(s) 330, 712, 807, 974, 1096
AluI AGCT 5 cut(s) 330, 712, 807, 974, 1096
Alw21I GWGCWC 1 cut(s) 84
Alw26I GTCTC 2 cut(s) 452, 693
AlwI GGATC 2 cut(s) 761, 849
Ama87I CYCGRG 4 cut(s) 145, 284, 407, 1052
Aor13HI TCCGGA 1 cut(s) 769
AoxI GGCC 1 cut(s) 363
ApoI RAATTY 5 cut(s) 17, 26, 382, 543, 831
ArsI GACNNNNNNTTYG 2 cut(s) 743, 775
AseI ATTAAT 1 cut(s) 207
AsiGI ACCGGT 1 cut(s) 443
AspLEI GCGC 1 cut(s) 698
AspS9I GGNCC 2 cut(s) 364, 1144
AsuHPI GGTGA 4 cut(s) 433, 503, 626, 1002
AsuII TTCGAA 1 cut(s) 649
AvaI CYCGRG 4 cut(s) 145, 284, 407, 1052
AvaII GGWCC 1 cut(s) 1144
BanI GGYRCC 1 cut(s) 695
BbsI GAAGAC 1 cut(s) 332
Bbv12I GWGCWC 1 cut(s) 84
BccI CCATC 4 cut(s) 156, 357, 544, 1064
BciT130I CCWGG 3 cut(s) 224, 1041, 1142
BciVI GTATCC 1 cut(s) 858
BclI TGATCA 2 cut(s) 73, 631
BcoDI GTCTC 2 cut(s) 452, 693
BcuI ACTAGT 1 cut(s) 1084
BfaI CTAG 5 cut(s) 14, 609, 827, 980, 1085
BfmI CTRYAG 2 cut(s) 601, 747
BfoI RGCGCY 1 cut(s) 699
BfuI GTATCC 1 cut(s) 858
BglII AGATCT 2 cut(s) 10, 957
Bme1390I CCNGG 3 cut(s) 224, 1041, 1142
Bme18I GGWCC 1 cut(s) 1144
BmeT110I CYCGRG 4 cut(s) 145, 284, 407, 1052
BmgT120I GGNCC 2 cut(s) 364, 1144
BmiI GGNNCC 2 cut(s) 697, 1146
BmrFI CCNGG 3 cut(s) 224, 1041, 1142
BmsI GCATC 4 cut(s) 361, 448, 564, 763
BpiI GAAGAC 1 cut(s) 332
BpmI CTGGAG 2 cut(s) 55, 1085
Bpu14I TTCGAA 1 cut(s) 649
BpuEI CTTGAG 2 cut(s) 508, 1040
Bsa29I ATCGAT 1 cut(s) 160
BsaBI GATNNNNATC 2 cut(s) 156, 554
BsaHI GRCGYC 1 cut(s) 696
BsaI GGTCTC 1 cut(s) 452
BsaJI CCNNGG 1 cut(s) 860
BsaWI WCCGGW 2 cut(s) 443, 769
BsaXI ACNNNNNCTCC 2 cut(s) 453, 483
Bsc4I CCNNNNNNNGG 1 cut(s) 478
Bse118I RCCGGY 2 cut(s) 443, 584
Bse1I ACTGG 2 cut(s) 38, 1102
Bse3DI GCAATG 1 cut(s) 419
Bse8I GATNNNNATC 2 cut(s) 156, 554
BseAI TCCGGA 1 cut(s) 769
BseBI CCWGG 3 cut(s) 224, 1041, 1142
BseCI ATCGAT 1 cut(s) 160
BseDI CCNNGG 1 cut(s) 860
BseGI GGATG 3 cut(s) 555, 778, 1075
BseJI GATNNNNATC 2 cut(s) 156, 554
BseLI CCNNNNNNNGG 1 cut(s) 478
BseMI GCAATG 1 cut(s) 419
BseMII CTCAG 4 cut(s) 463, 525, 791, 945
BseNI ACTGG 2 cut(s) 38, 1102
BshFI GGCC 1 cut(s) 365
BshNI GGYRCC 1 cut(s) 695
BshTI ACCGGT 1 cut(s) 443
BshVI ATCGAT 1 cut(s) 160
BsiHKAI GWGCWC 1 cut(s) 84
BsiHKCI CYCGRG 4 cut(s) 145, 284, 407, 1052
BsiSI CCGG 3 cut(s) 444, 585, 770
BslFI GGGAC 1 cut(s) 83
BslI CCNNNNNNNGG 1 cut(s) 478
BsmAI GTCTC 2 cut(s) 452, 693
BsmFI GGGAC 1 cut(s) 83
BsnI GGCC 1 cut(s) 365
Bso31I GGTCTC 1 cut(s) 452
BsoBI CYCGRG 4 cut(s) 145, 284, 407, 1052
Bsp119I TTCGAA 1 cut(s) 649
Bsp1286I GDGCHC 1 cut(s) 84
Bsp13I TCCGGA 1 cut(s) 769
Bsp143I GATC 8 cut(s) 10, 73, 157, 624, 631, 766, 841, 957
BspACI CCGC 1 cut(s) 1067
BspANI GGCC 1 cut(s) 365
BspCNI CTCAG 4 cut(s) 462, 526, 792, 946
BspDI ATCGAT 1 cut(s) 160
BspEI TCCGGA 1 cut(s) 769
BspHI TCATGA 1 cut(s) 621
BspLI GGNNCC 2 cut(s) 697, 1146
BspMAI CTGCAG 1 cut(s) 605
BspPI GGATC 2 cut(s) 761, 849
BspT104I TTCGAA 1 cut(s) 649
BspT107I GGYRCC 1 cut(s) 695
BspTNI GGTCTC 1 cut(s) 452
BsrDI GCAATG 1 cut(s) 419
BsrFI RCCGGY 2 cut(s) 443, 584
BsrI ACTGG 2 cut(s) 38, 1102
BssAI RCCGGY 2 cut(s) 443, 584
BssECI CCNNGG 1 cut(s) 860
BssMI GATC 8 cut(s) 10, 73, 157, 624, 631, 766, 841, 957
BssNI GRCGYC 1 cut(s) 696
BssT1I CCWWGG 1 cut(s) 860
Bst2UI CCWGG 3 cut(s) 224, 1041, 1142
Bst4CI ACNGT 3 cut(s) 437, 518, 1033
Bst6I CTCTTC 1 cut(s) 329
BstACI GRCGYC 1 cut(s) 696
BstBI TTCGAA 1 cut(s) 649
BstC8I GCNNGC 2 cut(s) 601, 1125
BstDEI CTNAG 6 cut(s) 85, 425, 449, 534, 800, 954
BstF5I GGATG 3 cut(s) 555, 778, 1075
BstH2I RGCGCY 1 cut(s) 699
BstHHI GCGC 1 cut(s) 698
BstKTI GATC 8 cut(s) 13, 76, 160, 627, 634, 769, 844, 960
BstMAI GTCTC 2 cut(s) 452, 693
BstMBI GATC 8 cut(s) 10, 73, 157, 624, 631, 766, 841, 957
BstMWI GCNNNNNNNGC 3 cut(s) 371, 609, 709
BstNI CCWGG 3 cut(s) 224, 1041, 1142
BstNSI RCATGY 1 cut(s) 1127
BstSCI CCNGG 3 cut(s) 222, 1039, 1140
BstSFI CTRYAG 2 cut(s) 601, 747
BstV2I GAAGAC 1 cut(s) 332
BstX2I RGATCY 2 cut(s) 10, 957
BstXI CCANNNNNNTGG 1 cut(s) 588
BstYI RGATCY 2 cut(s) 10, 957
Bsu15I ATCGAT 1 cut(s) 160
BsuI GTATCC 1 cut(s) 858
BsuRI GGCC 1 cut(s) 365
BsuTUI ATCGAT 1 cut(s) 160
BtsCI GGATG 3 cut(s) 555, 778, 1075
BtsIMutI CAGTG 1 cut(s) 523
Cac8I GCNNGC 2 cut(s) 601, 1125
CciI TCATGA 1 cut(s) 621
CfoI GCGC 1 cut(s) 698
Cfr10I RCCGGY 2 cut(s) 443, 584
Cfr13I GGNCC 2 cut(s) 364, 1144
ClaI ATCGAT 1 cut(s) 160
Csp6I GTAC 1 cut(s) 126
CspAI ACCGGT 1 cut(s) 443
CviAII CATG 9 cut(s) 67, 77, 255, 353, 361, 622, 723, 1036, 1124
CviQI GTAC 1 cut(s) 126
DdeI CTNAG 6 cut(s) 85, 425, 449, 534, 800, 954
DinI GGCGCC 1 cut(s) 697
DpnI GATC 8 cut(s) 12, 75, 159, 626, 633, 768, 843, 959
DpnII GATC 8 cut(s) 10, 73, 157, 624, 631, 766, 841, 957
DraI TTTAAA 1 cut(s) 1108
Eam1104I CTCTTC 1 cut(s) 329
EarI CTCTTC 1 cut(s) 329
Eco130I CCWWGG 1 cut(s) 860
Eco31I GGTCTC 1 cut(s) 452
Eco47I GGWCC 1 cut(s) 1144
Eco57I CTGAAG 1 cut(s) 755
Eco88I CYCGRG 4 cut(s) 145, 284, 407, 1052
EcoRII CCWGG 3 cut(s) 222, 1039, 1140
EcoT14I CCWWGG 1 cut(s) 860
EgeI GGCGCC 1 cut(s) 697
EheI GGCGCC 1 cut(s) 697
ErhI CCWWGG 1 cut(s) 860
FaeI CATG 9 cut(s) 70, 80, 258, 356, 364, 625, 726, 1039, 1127
FalI AAGNNNNNCTT 2 cut(s) 997, 1029
FaqI GGGAC 1 cut(s) 83
FatI CATG 9 cut(s) 66, 76, 254, 352, 360, 621, 722, 1035, 1123
FauNDI CATATG 1 cut(s) 755
FbaI TGATCA 2 cut(s) 73, 631
FokI GGATG 3 cut(s) 562, 785, 1082
FspBI CTAG 5 cut(s) 14, 609, 827, 980, 1085
GlaI GCGC 1 cut(s) 697
GsuI CTGGAG 2 cut(s) 55, 1085
HaeII RGCGCY 1 cut(s) 699
HaeIII GGCC 1 cut(s) 365
HapII CCGG 3 cut(s) 444, 585, 770
HhaI GCGC 1 cut(s) 698
Hin1I GRCGYC 1 cut(s) 696
Hin1II CATG 9 cut(s) 70, 80, 258, 356, 364, 625, 726, 1039, 1127
Hin6I GCGC 1 cut(s) 696
HinP1I GCGC 1 cut(s) 696
HincII GTYRAC 3 cut(s) 309, 508, 728
HindII GTYRAC 3 cut(s) 309, 508, 728
HinfI GANTC 5 cut(s) 133, 337, 388, 592, 1115
HpaI GTTAAC 1 cut(s) 508
HpaII CCGG 3 cut(s) 444, 585, 770
HphI GGTGA 4 cut(s) 433, 503, 626, 1002
Hpy166II GTNNAC 5 cut(s) 64, 309, 508, 728, 1010
Hpy188I TCNGA 6 cut(s) 452, 735, 801, 846, 992, 1080
Hpy188III TCNNGA 9 cut(s) 8, 14, 53, 180, 325, 409, 622, 770, 1052
Hpy8I GTNNAC 5 cut(s) 64, 309, 508, 728, 1010
HpyAV CCTTC 4 cut(s) 645, 730, 806, 1068
HpyCH4III ACNGT 3 cut(s) 437, 518, 1033
HpyCH4IV ACGT 1 cut(s) 1111
HpyCH4V TGCA 6 cut(s) 396, 461, 603, 776, 921, 1127
HpyF10VI GCNNNNNNNGC 3 cut(s) 371, 609, 709
HpyF3I CTNAG 6 cut(s) 85, 425, 449, 534, 800, 954
HpySE526I ACGT 1 cut(s) 1111
Hsp92I GRCGYC 1 cut(s) 696
Hsp92II CATG 9 cut(s) 70, 80, 258, 356, 364, 625, 726, 1039, 1127
HspAI GCGC 1 cut(s) 696
KasI GGCGCC 1 cut(s) 695
Kpn2I TCCGGA 1 cut(s) 769
Ksp22I TGATCA 2 cut(s) 73, 631
KspAI GTTAAC 1 cut(s) 508
Kzo9I GATC 8 cut(s) 10, 73, 157, 624, 631, 766, 841, 957
LmnI GCTCC 1 cut(s) 812
LweI GCATC 4 cut(s) 361, 448, 564, 763
MaeI CTAG 5 cut(s) 14, 609, 827, 980, 1085
MaeII ACGT 1 cut(s) 1111
MaeIII GTNAC 3 cut(s) 279, 431, 439
MalI GATC 8 cut(s) 12, 75, 159, 626, 633, 768, 843, 959
MboI GATC 8 cut(s) 10, 73, 157, 624, 631, 766, 841, 957
MboII GAAGA 3 cut(s) 332, 346, 893
MfeI CAATTG 1 cut(s) 916
MflI RGATCY 2 cut(s) 10, 957
MhlI GDGCHC 1 cut(s) 84
Mly113I GGCGCC 1 cut(s) 696
MlyI GAGTC 1 cut(s) 346
MmeI TCCRAC 2 cut(s) 569, 806
MnlI CCTC 7 cut(s) 30, 312, 411, 529, 532, 651, 660
MroI TCCGGA 1 cut(s) 769
MseI TTAA 6 cut(s) 207, 416, 507, 969, 1004, 1107
MspI CCGG 3 cut(s) 444, 585, 770
MspR9I CCNGG 3 cut(s) 224, 1041, 1142
MssI GTTTAAAC 1 cut(s) 1108
MunI CAATTG 1 cut(s) 916
MvaI CCWGG 3 cut(s) 224, 1041, 1142
MwoI GCNNNNNNNGC 3 cut(s) 371, 609, 709
NarI GGCGCC 1 cut(s) 696
NdeI CATATG 1 cut(s) 755
NdeII GATC 8 cut(s) 10, 73, 157, 624, 631, 766, 841, 957
NlaIII CATG 9 cut(s) 70, 80, 258, 356, 364, 625, 726, 1039, 1127
NlaIV GGNNCC 2 cut(s) 697, 1146
NmuCI GTSAC 2 cut(s) 431, 439
NspI RCATGY 1 cut(s) 1127
NspV TTCGAA 1 cut(s) 649
PaeI GCATGC 1 cut(s) 1127
PaeR7I CTCGAG 2 cut(s) 284, 407
PagI TCATGA 1 cut(s) 621
PfeI GAWTC 4 cut(s) 133, 388, 592, 1115
PflFI GACNNNGTC 1 cut(s) 437
PflMI CCANNNNNTGG 1 cut(s) 478
PfoI TCCNGGA 2 cut(s) 222, 1140
PinAI ACCGGT 1 cut(s) 443
PleI GAGTC 1 cut(s) 345
PluTI GGCGCC 1 cut(s) 699
PmeI GTTTAAAC 1 cut(s) 1108
PpsI GAGTC 1 cut(s) 345
PshBI ATTAAT 1 cut(s) 207
Psp6I CCWGG 3 cut(s) 222, 1039, 1140
PspGI CCWGG 3 cut(s) 222, 1039, 1140
PspN4I GGNNCC 2 cut(s) 697, 1146
PspPI GGNCC 2 cut(s) 364, 1144
PspXI VCTCGAGB 1 cut(s) 284
PstI CTGCAG 1 cut(s) 605
PsuI RGATCY 2 cut(s) 10, 957
PsyI GACNNNGTC 1 cut(s) 437
RsaI GTAC 1 cut(s) 127
RsaNI GTAC 1 cut(s) 126
SaqAI TTAA 6 cut(s) 207, 416, 507, 969, 1004, 1107
Sau3AI GATC 8 cut(s) 10, 73, 157, 624, 631, 766, 841, 957
Sau96I GGNCC 2 cut(s) 364, 1144
SchI GAGTC 1 cut(s) 346
ScrFI CCNGG 3 cut(s) 224, 1041, 1142
SduI GDGCHC 1 cut(s) 84
SfaNI GCATC 4 cut(s) 361, 448, 564, 763
SfcI CTRYAG 2 cut(s) 601, 747
SfoI GGCGCC 1 cut(s) 697
Sfr274I CTCGAG 2 cut(s) 284, 407
SfuI TTCGAA 1 cut(s) 649
SinI GGWCC 1 cut(s) 1144
SlaI CTCGAG 2 cut(s) 284, 407
SmlI CTYRAG 4 cut(s) 284, 407, 523, 1019
SmoI CTYRAG 4 cut(s) 284, 407, 523, 1019
SpeI ACTAGT 1 cut(s) 1084
SphI GCATGC 1 cut(s) 1127
SsiI CCGC 1 cut(s) 1067
SspDI GGCGCC 1 cut(s) 695
SspI AATATT 1 cut(s) 476
SspMI CTAG 5 cut(s) 14, 609, 827, 980, 1085
StyD4I CCNGG 3 cut(s) 222, 1039, 1140
StyI CCWWGG 1 cut(s) 860
TaaI ACNGT 3 cut(s) 437, 518, 1033
TaiI ACGT 1 cut(s) 1114
TaqI TCGA 6 cut(s) 52, 160, 285, 408, 649, 762
TatI WGTACW 1 cut(s) 125
TfiI GAWTC 4 cut(s) 133, 388, 592, 1115
Tru1I TTAA 6 cut(s) 207, 416, 507, 969, 1004, 1107
Tru9I TTAA 6 cut(s) 207, 416, 507, 969, 1004, 1107
TscAI CASTG 1 cut(s) 523
TseFI GTSAC 2 cut(s) 431, 439
Tsp45I GTSAC 2 cut(s) 431, 439
TspDTI ATGAA 6 cut(s) 39, 80, 103, 146, 243, 976
TspGWI ACGGA 1 cut(s) 294
TspRI CASTG 1 cut(s) 523
Tth111I GACNNNGTC 1 cut(s) 437
Van91I CCANNNNNTGG 1 cut(s) 478
VpaK11BI GGWCC 1 cut(s) 1144
VspI ATTAAT 1 cut(s) 207
XapI RAATTY 5 cut(s) 17, 26, 382, 543, 831
XbaI TCTAGA 1 cut(s) 13
XceI RCATGY 1 cut(s) 1127
XhoI CTCGAG 2 cut(s) 284, 407
XspI CTAG 5 cut(s) 14, 609, 827, 980, 1085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.