Rroxscaffold_7G00213130

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000103
Physical Location & Seq
Forward (+)
63627917 .. 63630146
2230 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00213130.1

Sequence Viewer

Length: 1305 bp
ATGGAGATGGATAGAATTAGCAGTTTACCAAATGATGTCACAGAAAAGATTTTGTCATGTATGCCGCTTAGGGACGCAGTGAGGACAAGTGTTTTATCCAGCAAGTGGAGGTACAAGTCGGCCATGCTTCAAGATCTAGAATTTGATGAGTGTGTCTGGAGAAGAAGCCAAGATTGGGAGTTTCATGATGATGATTATCAAATCCACACCTTTGGGAACATGATTGATCATGTGCTCTTAGTTCATATTGTCCCCATACGCAAGTTCAAGCTATGCTGTACTATGGATGAGGTAGCCACTAGAGATATTGATCGATGGATGACCCATCTATCAAGAAACTCTATCAAAGAGTTGACAATTAAGCTTTGGGTAGACCATGAATACAACATTCCATTCTCTCTGTTTTCATGTCAAGGTCTTGTTCACTTAGAGTTACTCAAGTGTTTGCTCAAACCTCCGTCAACCTTCAAAGGGTTCAAGAGTTTGAAGAGTCTTCAACTCCACGCTGTTGACGTGGCCCAAGATGCGTTTGATAACTTGGTTCGTTGCAGTCCTCTGCTTGAGAGATTAACATTGCGATATTGTGACGGTGTCACCAATCTCGAAATTGATGCACCAAATCTCCAATATGTGCACGTTTTAGGTGTTTTTAATGTCATTAACCTTGAGAATGCCTGTAGTATCACTGAGGCTGAAATTTGTATGAACATCCATAATGACCAAATAGGGGTTCCTGCCGGTTGGATTCCTGCTTGCAGTTCTAGCAATTTGCTCAAGATCTTTGATCACCTACCTCATATTCGAAGGCTTGGAATTAAGTGGCGCTTTTTAGAGTATTTGTCTCTGGGCTCTTTGCCAGAAAAGCTCGATAAACCATGTCAATATCTGAATGCTCTTTCTATAGACATATGCTTCGACGATCCGGATGCAATTCCAACGGCTCTATGCCTTCTGAGAAGCTCCCCTGCATTACAAGAGTTAGAAATTGTGATGGATCGGATAAAGAAACTCGAAAGGATACACACTGTTGTCGAAGAAGTGAAGTCCTCTTGTTTGGATGTGAGCTACAATTGCACACTTTCTCAACTGCGACTTGTGAAAATAACTGAGATCTCTGGTGTTAAAGCTGAACTAGATTTCATCGGATTTCTCCTTTTAAGTTCACCTCTTCTTGAGAGAATGACTATCACGCCTCCTCGATTTCCTGAGCCTGCTACTGTGGATGGTTTTCCAAAACTAGTAAAAGAGCTACTCCAGTTTAAACGTGAATCAAAGCATGCAGAGATTATTCTCCTGGACCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

434

Amino Acids

49.8

Weight (kDa)

5.72

Isoelectric Point (pI)

53.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 38 2.1e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 89 - 396 1.9e-22 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 103 - 329 4e-16 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 358 - 396 9.9e-06 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 105
AccI GTMKAC 1 cut(s) 372
AccIII TCCGGA 1 cut(s) 922
AciI CCGC 1 cut(s) 65
AclWI GGATC 2 cut(s) 914, 1002
AcoI YGGCCR 1 cut(s) 120
AcsI RAATTY 2 cut(s) 140, 696
AfaI GTAC 2 cut(s) 113, 280
AfiI CCNNNNNNNGG 4 cut(s) 105, 175, 471, 727
AgsI TTSAA 6 cut(s) 131, 268, 469, 478, 487, 497
AhlI ACTAGT 1 cut(s) 1237
AjiI CACGTC 1 cut(s) 514
AjnI CCWGG 1 cut(s) 1293
AjuI GAANNNNNNNTTGG 4 cut(s) 157, 189, 714, 746
AluBI AGCT 7 cut(s) 271, 364, 865, 960, 1065, 1127, 1249
AluI AGCT 7 cut(s) 271, 364, 865, 960, 1065, 1127, 1249
Alw21I GWGCWC 2 cut(s) 237, 636
Alw26I GTCTC 1 cut(s) 846
Alw44I GTGCAC 1 cut(s) 632
AlwI GGATC 2 cut(s) 914, 1002
Aor13HI TCCGGA 1 cut(s) 922
AoxI GGCC 2 cut(s) 120, 516
ApaLI GTGCAC 1 cut(s) 632
ApoI RAATTY 2 cut(s) 140, 696
ArsI GACNNNNNNTTYG 2 cut(s) 896, 928
AspLEI GCGC 1 cut(s) 825
AspS9I GGNCC 2 cut(s) 517, 1297
AsuHPI GGTGA 3 cut(s) 586, 779, 1155
AsuII TTCGAA 1 cut(s) 802
AvaII GGWCC 1 cut(s) 1297
BaeGI GKGCMC 1 cut(s) 636
BanII GRGCYC 1 cut(s) 851
BbsI GAAGAC 1 cut(s) 485
Bbv12I GWGCWC 2 cut(s) 237, 636
BccI CCATC 4 cut(s) 309, 333, 985, 1217
BceAI ACGGC 1 cut(s) 954
BcgI CGANNNNNNTGC 4 cut(s) 593, 627, 908, 942
BciT130I CCWGG 1 cut(s) 1295
BciVI GTATCC 1 cut(s) 1011
BclI TGATCA 2 cut(s) 226, 784
BcoDI GTCTC 1 cut(s) 846
BcuI ACTAGT 1 cut(s) 1237
BfaI CTAG 5 cut(s) 137, 300, 762, 1133, 1238
BfmI CTRYAG 2 cut(s) 676, 900
BfoI RGCGCY 1 cut(s) 826
BfuI GTATCC 1 cut(s) 1011
BglII AGATCT 3 cut(s) 133, 777, 1110
BisI GCNGC 1 cut(s) 65
BlsI GCNGC 1 cut(s) 66
Bme1390I CCNGG 1 cut(s) 1295
Bme18I GGWCC 1 cut(s) 1297
BmgBI CACGTC 1 cut(s) 514
BmgT120I GGNCC 2 cut(s) 517, 1297
BmiI GGNNCC 2 cut(s) 732, 1299
BmrFI CCNGG 1 cut(s) 1295
BmsI GCATC 3 cut(s) 514, 601, 916
BpiI GAAGAC 1 cut(s) 485
BpmI CTGGAG 2 cut(s) 178, 1238
Bpu10I CCTNAGC 2 cut(s) 68, 1206
Bpu14I TTCGAA 1 cut(s) 802
BpuEI CTTGAG 5 cut(s) 422, 581, 686, 758, 1193
Bsa29I ATCGAT 1 cut(s) 313
BsaBI GATNNNNATC 2 cut(s) 195, 309
BsaWI WCCGGW 1 cut(s) 922
BsaXI ACNNNNNCTCC 2 cut(s) 606, 636
Bsc4I CCNNNNNNNGG 4 cut(s) 105, 175, 471, 727
Bse118I RCCGGY 1 cut(s) 737
Bse1I ACTGG 1 cut(s) 1255
Bse3DI GCAATG 1 cut(s) 572
Bse8I GATNNNNATC 2 cut(s) 195, 309
BseAI TCCGGA 1 cut(s) 922
BseBI CCWGG 1 cut(s) 1295
BseCI ATCGAT 1 cut(s) 313
BseGI GGATG 6 cut(s) 292, 324, 708, 931, 1063, 1228
BseJI GATNNNNATC 2 cut(s) 195, 309
BseLI CCNNNNNNNGG 4 cut(s) 105, 175, 471, 727
BseMI GCAATG 1 cut(s) 572
BseMII CTCAG 4 cut(s) 678, 944, 1098, 1197
BseNI ACTGG 1 cut(s) 1255
BseRI GAGGAG 1 cut(s) 1185
BseSI GKGCMC 1 cut(s) 636
BshFI GGCC 2 cut(s) 122, 518
BshVI ATCGAT 1 cut(s) 313
BsiHKAI GWGCWC 2 cut(s) 237, 636
BsiSI CCGG 2 cut(s) 738, 923
BslFI GGGAC 2 cut(s) 86, 236
BslI CCNNNNNNNGG 4 cut(s) 105, 175, 471, 727
BsmAI GTCTC 1 cut(s) 846
BsmFI GGGAC 2 cut(s) 86, 236
BsmI GAATGC 2 cut(s) 676, 895
BsnI GGCC 2 cut(s) 122, 518
Bsp119I TTCGAA 1 cut(s) 802
Bsp1286I GDGCHC 3 cut(s) 237, 636, 851
Bsp13I TCCGGA 1 cut(s) 922
Bsp143I GATC 8 cut(s) 133, 226, 310, 777, 784, 919, 994, 1110
BspACI CCGC 1 cut(s) 65
BspANI GGCC 2 cut(s) 122, 518
BspCNI CTCAG 4 cut(s) 679, 945, 1099, 1198
BspDI ATCGAT 1 cut(s) 313
BspEI TCCGGA 1 cut(s) 922
BspHI TCATGA 1 cut(s) 184
BspLI GGNNCC 2 cut(s) 732, 1299
BspPI GGATC 2 cut(s) 914, 1002
BspT104I TTCGAA 1 cut(s) 802
BsrDI GCAATG 1 cut(s) 572
BsrFI RCCGGY 1 cut(s) 737
BsrI ACTGG 1 cut(s) 1255
BssAI RCCGGY 1 cut(s) 737
BssMI GATC 8 cut(s) 133, 226, 310, 777, 784, 919, 994, 1110
Bst2UI CCWGG 1 cut(s) 1295
Bst4CI ACNGT 3 cut(s) 590, 1027, 1219
Bst6I CTCTTC 2 cut(s) 482, 1173
BstBI TTCGAA 1 cut(s) 802
BstC8I GCNNGC 3 cut(s) 754, 1212, 1278
BstDEI CTNAG 7 cut(s) 68, 238, 427, 687, 953, 1107, 1206
BstF5I GGATG 6 cut(s) 292, 324, 708, 931, 1063, 1228
BstH2I RGCGCY 1 cut(s) 826
BstHHI GCGC 1 cut(s) 825
BstKTI GATC 8 cut(s) 136, 229, 313, 780, 787, 922, 997, 1113
BstMAI GTCTC 1 cut(s) 846
BstMBI GATC 8 cut(s) 133, 226, 310, 777, 784, 919, 994, 1110
BstMWI GCNNNNNNNGC 4 cut(s) 524, 762, 862, 1071
BstNI CCWGG 1 cut(s) 1295
BstNSI RCATGY 1 cut(s) 1280
BstSCI CCNGG 1 cut(s) 1293
BstSFI CTRYAG 2 cut(s) 676, 900
BstSLI GKGCMC 1 cut(s) 636
BstV2I GAAGAC 1 cut(s) 485
BstX2I RGATCY 3 cut(s) 133, 777, 1110
BstXI CCANNNNNNTGG 1 cut(s) 212
BstYI RGATCY 3 cut(s) 133, 777, 1110
Bsu15I ATCGAT 1 cut(s) 313
BsuI GTATCC 1 cut(s) 1011
BsuRI GGCC 2 cut(s) 122, 518
BsuTUI ATCGAT 1 cut(s) 313
BtrI CACGTC 1 cut(s) 514
BtsCI GGATG 6 cut(s) 292, 324, 708, 931, 1063, 1228
BtsI GCAGTG 1 cut(s) 84
BtsIMutI CAGTG 3 cut(s) 84, 684, 1023
Cac8I GCNNGC 3 cut(s) 754, 1212, 1278
CciI TCATGA 1 cut(s) 184
CfoI GCGC 1 cut(s) 825
Cfr10I RCCGGY 1 cut(s) 737
Cfr13I GGNCC 2 cut(s) 517, 1297
ClaI ATCGAT 1 cut(s) 313
CseI GACGC 1 cut(s) 83
Csp6I GTAC 2 cut(s) 112, 279
CviAII CATG 9 cut(s) 57, 124, 185, 220, 230, 377, 408, 876, 1277
CviQI GTAC 2 cut(s) 112, 279
DdeI CTNAG 7 cut(s) 68, 238, 427, 687, 953, 1107, 1206
DpnI GATC 8 cut(s) 135, 228, 312, 779, 786, 921, 996, 1112
DpnII GATC 8 cut(s) 133, 226, 310, 777, 784, 919, 994, 1110
DraI TTTAAA 1 cut(s) 1261
EaeI YGGCCR 1 cut(s) 120
Eam1104I CTCTTC 2 cut(s) 482, 1173
EarI CTCTTC 2 cut(s) 482, 1173
Eco24I GRGCYC 1 cut(s) 851
Eco47I GGWCC 1 cut(s) 1297
EcoRII CCWGG 1 cut(s) 1293
EcoT38I GRGCYC 1 cut(s) 851
FaeI CATG 9 cut(s) 60, 127, 188, 223, 233, 380, 411, 879, 1280
FalI AAGNNNNNCTT 2 cut(s) 809, 841
FaqI GGGAC 2 cut(s) 86, 236
FatI CATG 9 cut(s) 56, 123, 184, 219, 229, 376, 407, 875, 1276
FauNDI CATATG 1 cut(s) 908
FbaI TGATCA 2 cut(s) 226, 784
FblI GTMKAC 1 cut(s) 372
Fnu4HI GCNGC 1 cut(s) 65
FokI GGATG 6 cut(s) 299, 331, 695, 938, 1070, 1235
FriOI GRGCYC 1 cut(s) 851
Fsp4HI GCNGC 1 cut(s) 65
FspBI CTAG 5 cut(s) 137, 300, 762, 1133, 1238
GlaI GCGC 1 cut(s) 824
GluI GCNGC 1 cut(s) 65
GsuI CTGGAG 2 cut(s) 178, 1238
HaeII RGCGCY 1 cut(s) 826
HaeIII GGCC 2 cut(s) 122, 518
HapII CCGG 2 cut(s) 738, 923
HgaI GACGC 1 cut(s) 83
HhaI GCGC 1 cut(s) 825
Hin1II CATG 9 cut(s) 60, 127, 188, 223, 233, 380, 411, 879, 1280
Hin6I GCGC 1 cut(s) 823
HinP1I GCGC 1 cut(s) 823
HincII GTYRAC 3 cut(s) 354, 462, 511
HindII GTYRAC 3 cut(s) 354, 462, 511
HindIII AAGCTT 1 cut(s) 362
HinfI GANTC 3 cut(s) 490, 745, 1268
HpaII CCGG 2 cut(s) 738, 923
HphI GGTGA 3 cut(s) 586, 779, 1155
Hpy166II GTNNAC 8 cut(s) 26, 354, 373, 424, 462, 511, 634, 1163
Hpy188I TCNGA 4 cut(s) 888, 954, 999, 1145
Hpy8I GTNNAC 8 cut(s) 26, 354, 373, 424, 462, 511, 634, 1163
Hpy99I CGWCG 1 cut(s) 920
HpyAV CCTTC 3 cut(s) 475, 798, 959
HpyCH4III ACNGT 3 cut(s) 590, 1027, 1219
HpyCH4IV ACGT 3 cut(s) 513, 636, 1264
HpyCH4V TGCA 8 cut(s) 549, 614, 634, 756, 929, 968, 1074, 1280
HpyF10VI GCNNNNNNNGC 4 cut(s) 524, 762, 862, 1071
HpyF3I CTNAG 7 cut(s) 68, 238, 427, 687, 953, 1107, 1206
HpySE526I ACGT 3 cut(s) 513, 636, 1264
Hsp92II CATG 9 cut(s) 60, 127, 188, 223, 233, 380, 411, 879, 1280
HspAI GCGC 1 cut(s) 823
Kpn2I TCCGGA 1 cut(s) 922
Ksp22I TGATCA 2 cut(s) 226, 784
Kzo9I GATC 8 cut(s) 133, 226, 310, 777, 784, 919, 994, 1110
LmnI GCTCC 1 cut(s) 965
LweI GCATC 3 cut(s) 514, 601, 916
MaeI CTAG 5 cut(s) 137, 300, 762, 1133, 1238
MaeII ACGT 3 cut(s) 513, 636, 1264
MaeIII GTNAC 4 cut(s) 37, 432, 584, 592
MalI GATC 8 cut(s) 135, 228, 312, 779, 786, 921, 996, 1112
MboI GATC 8 cut(s) 133, 226, 310, 777, 784, 919, 994, 1110
MboII GAAGA 5 cut(s) 174, 485, 499, 1046, 1160
MfeI CAATTG 1 cut(s) 1069
MflI RGATCY 3 cut(s) 133, 777, 1110
MhlI GDGCHC 3 cut(s) 237, 636, 851
MlyI GAGTC 1 cut(s) 499
MmeI TCCRAC 2 cut(s) 722, 959
MroI TCCGGA 1 cut(s) 922
MseI TTAA 8 cut(s) 360, 569, 651, 660, 816, 1122, 1157, 1260
MslI CAYNNNNRTG 1 cut(s) 189
MspI CCGG 2 cut(s) 738, 923
MspR9I CCNGG 1 cut(s) 1295
MssI GTTTAAAC 1 cut(s) 1261
MunI CAATTG 1 cut(s) 1069
Mva1269I GAATGC 2 cut(s) 676, 895
MvaI CCWGG 1 cut(s) 1295
MwoI GCNNNNNNNGC 4 cut(s) 524, 762, 862, 1071
NdeI CATATG 1 cut(s) 908
NdeII GATC 8 cut(s) 133, 226, 310, 777, 784, 919, 994, 1110
NlaIII CATG 9 cut(s) 60, 127, 188, 223, 233, 380, 411, 879, 1280
NlaIV GGNNCC 2 cut(s) 732, 1299
NmuCI GTSAC 3 cut(s) 37, 584, 592
NspI RCATGY 1 cut(s) 1280
NspV TTCGAA 1 cut(s) 802
PaeI GCATGC 1 cut(s) 1280
PagI TCATGA 1 cut(s) 184
PcsI WCGNNNNNNNCGW 1 cut(s) 510
PctI GAATGC 2 cut(s) 676, 895
PfeI GAWTC 2 cut(s) 745, 1268
PflFI GACNNNGTC 1 cut(s) 590
PflMI CCANNNNNTGG 1 cut(s) 105
PfoI TCCNGGA 1 cut(s) 1293
PkrI GCNGC 1 cut(s) 66
PleI GAGTC 1 cut(s) 498
PmeI GTTTAAAC 1 cut(s) 1261
PpsI GAGTC 1 cut(s) 498
Psp6I CCWGG 1 cut(s) 1293
PspGI CCWGG 1 cut(s) 1293
PspN4I GGNNCC 2 cut(s) 732, 1299
PspPI GGNCC 2 cut(s) 517, 1297
PsuI RGATCY 3 cut(s) 133, 777, 1110
PsyI GACNNNGTC 1 cut(s) 590
RsaI GTAC 2 cut(s) 113, 280
RsaNI GTAC 2 cut(s) 112, 279
RseI CAYNNNNRTG 1 cut(s) 189
SaqAI TTAA 8 cut(s) 360, 569, 651, 660, 816, 1122, 1157, 1260
SatI GCNGC 1 cut(s) 65
Sau3AI GATC 8 cut(s) 133, 226, 310, 777, 784, 919, 994, 1110
Sau96I GGNCC 2 cut(s) 517, 1297
SchI GAGTC 1 cut(s) 499
ScrFI CCNGG 1 cut(s) 1295
SduI GDGCHC 3 cut(s) 237, 636, 851
SfaNI GCATC 3 cut(s) 514, 601, 916
SfcI CTRYAG 2 cut(s) 676, 900
SfuI TTCGAA 1 cut(s) 802
SinI GGWCC 1 cut(s) 1297
SmiMI CAYNNNNRTG 1 cut(s) 189
SmlI CTYRAG 5 cut(s) 437, 560, 665, 773, 1172
SmoI CTYRAG 5 cut(s) 437, 560, 665, 773, 1172
SpeI ACTAGT 1 cut(s) 1237
SphI GCATGC 1 cut(s) 1280
SsiI CCGC 1 cut(s) 65
SspMI CTAG 5 cut(s) 137, 300, 762, 1133, 1238
StyD4I CCNGG 1 cut(s) 1293
TaaI ACNGT 3 cut(s) 590, 1027, 1219
TaiI ACGT 3 cut(s) 516, 639, 1267
TaqI TCGA 8 cut(s) 313, 603, 802, 867, 915, 1011, 1032, 1198
TatI WGTACW 1 cut(s) 278
TauI GCSGC 1 cut(s) 67
TfiI GAWTC 2 cut(s) 745, 1268
Tru1I TTAA 8 cut(s) 360, 569, 651, 660, 816, 1122, 1157, 1260
Tru9I TTAA 8 cut(s) 360, 569, 651, 660, 816, 1122, 1157, 1260
TscAI CASTG 3 cut(s) 84, 691, 1030
TseFI GTSAC 3 cut(s) 37, 584, 592
Tsp45I GTSAC 3 cut(s) 37, 584, 592
TspDTI ATGAA 6 cut(s) 173, 233, 393, 396, 719, 1129
TspGWI ACGGA 1 cut(s) 447
TspRI CASTG 3 cut(s) 84, 691, 1030
Tth111I GACNNNGTC 1 cut(s) 590
Van91I CCANNNNNTGG 1 cut(s) 105
VneI GTGCAC 1 cut(s) 632
VpaK11BI GGWCC 1 cut(s) 1297
XapI RAATTY 2 cut(s) 140, 696
XbaI TCTAGA 1 cut(s) 136
XceI RCATGY 1 cut(s) 1280
XmiI GTMKAC 1 cut(s) 372
XspI CTAG 5 cut(s) 137, 300, 762, 1133, 1238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.