Rroxscaffold_7G00212880

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000103
Physical Location & Seq
Reverse (-)
63406995 .. 63410508
3514 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00212880.1

Sequence Viewer

Length: 1242 bp
ATGGATATTGAGTTTGACAATCTCAGTGACTTACCAAGTGATGTTACGGAAAAGATTTTGTCATTTTTGCCAATGAAAGAGGCAGTGAGGACAAGTATATTATCAAGCAAGTGGAGGTACAAGTGGGCTATGCTTCCAGATCTTGTGCTTGATGAACTGGGTTTCCCAGGAGTACTTTATAAGCATGACATATTAGTGAAAATGGTTGATCATGTGCTCTTCCTTCACATTGGTCCGATAAACAAGGTCAAGCTTTCTCATAAAGGTCTTAATGGCACCGCAGATATTGATAGATGGATTCTTCATCTATCAAGAAATTCTATGAAAGAGTTCACATTTAAGTTTTGGAAAAAGCCTGAATACAAGATGCCTTCATGTTTGTTTTCCTGTCAAGATTTGGTTCATTTGGAATTGTGTAATTGTTCGCTAAAACCTCCGCGCACGTTCAAGGGCTTCAAGAGTTTGAAGAAACTTGAAATTGAAAGTGTTGCCCTGACCCAAGATGAGTTTGAAAATCCAATTGTGTGTTGTCCTCTGCTGAAATATTTGACCATGATAGATTGTCGTGGTTTCACCAAGCTCAAGATTGATGCACCGAATCTCCGAATCTTTTGCCTTCTAGGTGCTTTTGAGGATCTTAGTTTTCAGAACACCTTAAAACTTACAATTATTGCCATTTATTTAACAGCTAATGGTGACCAAAGAAGACAGAAACCTGGCAGTTCTAGCAATTTGCTCAAGCTTTTTGATCAGTGTGCTCATGTTCAAGGTCTTGATATTCAAAATTACTTTTTAAAGTATTTAGCTGTTGGTGACTTACCGGTAAAGCGTCCTAAACCATGTCTGCATCTGAAGTTGCTTCGTATAAACATAGATTTCAATGATCTGAAGGAGGTTTTATCTACTTTATACCTTCTGAGAAGCGCCCCTTTTCTACTAAAACTATATATCACGGTTCGTCAAGAGGGACAGGCTCTTGTGGGAGAGGTGAACTCTTGGTTAGATGACAACCAGAATTTCCAACTCAGAAAACTGCAAATTGTGGAAGTACATGGCATCAGTAGCGCCAAAGCTGGACTAGATTTCATCATATTTCTGCTTTTAAATTCACCAATGCTTGAGAAGGTGTTTTGCAAGCCTGCATCTCACTATAGTTCTCTGGAACTATTAAAAAAGATGATCCAGTTTAAGCGTTCCTCATCCCTTGCAGAGATAATCTACTTGGATCCGACCCATCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

413

Amino Acids

47.48

Weight (kDa)

8.87

Isoelectric Point (pI)

37.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 8 - 45 8.1e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 93 - 198 3.9e-12 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 96 - 317 2.6e-18 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 180 - 376 1.3e-08 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 180
AccB1I GGYRCC 1 cut(s) 275
AccII CGCG 1 cut(s) 439
AciI CCGC 2 cut(s) 279, 437
AclWI GGATC 4 cut(s) 642, 1174, 1220, 1233
AcsI RAATTY 3 cut(s) 316, 1015, 1105
AcuI CTGAAG 2 cut(s) 872, 908
AfaI GTAC 3 cut(s) 119, 174, 1050
AgeI ACCGGT 1 cut(s) 820
AgsI TTSAA 9 cut(s) 448, 457, 466, 476, 482, 512, 767, 782, 880
AjnI CCWGG 2 cut(s) 166, 715
AloI GAACNNNNNNTCC 2 cut(s) 147, 179
AluBI AGCT 6 cut(s) 253, 580, 689, 742, 806, 1073
AluI AGCT 6 cut(s) 253, 580, 689, 742, 806, 1073
Alw21I GWGCWC 2 cut(s) 219, 760
AlwI GGATC 4 cut(s) 642, 1174, 1220, 1233
ApoI RAATTY 3 cut(s) 316, 1015, 1105
AsiGI ACCGGT 1 cut(s) 820
Asp700I GAANNNNTTC 1 cut(s) 329
AspLEI GCGC 3 cut(s) 441, 926, 1067
AspS9I GGNCC 1 cut(s) 233
AsuHPI GGTGA 5 cut(s) 565, 707, 824, 1000, 1101
AvaII GGWCC 1 cut(s) 233
BamHI GGATCC 1 cut(s) 1225
BanI GGYRCC 1 cut(s) 275
BbsI GAAGAC 1 cut(s) 712
Bbv12I GWGCWC 2 cut(s) 219, 760
BccI CCATC 1 cut(s) 288
BcgI CGANNNNNNTGC 2 cut(s) 594, 628
BciT130I CCWGG 2 cut(s) 168, 717
BclI TGATCA 2 cut(s) 208, 748
BfaI CTAG 3 cut(s) 620, 726, 1079
BfmI CTRYAG 1 cut(s) 1150
BfoI RGCGCY 2 cut(s) 927, 1068
BglII AGATCT 1 cut(s) 139
BmcAI AGTACT 1 cut(s) 174
Bme1390I CCNGG 2 cut(s) 168, 717
Bme18I GGWCC 1 cut(s) 233
BmgT120I GGNCC 1 cut(s) 233
BmiI GGNNCC 2 cut(s) 277, 1227
BmrFI CCNGG 2 cut(s) 168, 717
BmrI ACTGGG 1 cut(s) 167
BmsI GCATC 5 cut(s) 357, 580, 856, 1065, 1151
BmuI ACTGGG 1 cut(s) 167
BpiI GAAGAC 1 cut(s) 712
BplI GAGNNNNNCTC 2 cut(s) 977, 1009
BpuEI CTTGAG 3 cut(s) 566, 722, 1139
BsaJI CCNNGG 1 cut(s) 166
BsaWI WCCGGW 1 cut(s) 820
BsaXI ACNNNNNCTCC 2 cut(s) 585, 615
Bse118I RCCGGY 1 cut(s) 820
Bse1I ACTGG 2 cut(s) 162, 1183
BseBI CCWGG 2 cut(s) 168, 717
BseDI CCNNGG 1 cut(s) 166
BseGI GGATG 1 cut(s) 1199
BseMII CTCAG 3 cut(s) 37, 908, 1039
BseNI ACTGG 2 cut(s) 162, 1183
Bsh1236I CGCG 1 cut(s) 439
BshNI GGYRCC 1 cut(s) 275
BshTI ACCGGT 1 cut(s) 820
BsiHKAI GWGCWC 2 cut(s) 219, 760
BsiSI CCGG 1 cut(s) 821
BslFI GGGAC 1 cut(s) 981
BsmFI GGGAC 1 cut(s) 981
Bsp1286I GDGCHC 2 cut(s) 219, 760
Bsp143I GATC 7 cut(s) 139, 208, 634, 748, 883, 1179, 1225
BspACI CCGC 2 cut(s) 279, 437
BspCNI CTCAG 3 cut(s) 36, 909, 1038
BspFNI CGCG 1 cut(s) 439
BspLI GGNNCC 2 cut(s) 277, 1227
BspPI GGATC 4 cut(s) 642, 1174, 1220, 1233
BspQI GCTCTTC 1 cut(s) 224
BspT107I GGYRCC 1 cut(s) 275
BsrFI RCCGGY 1 cut(s) 820
BsrI ACTGG 2 cut(s) 162, 1183
BssAI RCCGGY 1 cut(s) 820
BssECI CCNNGG 1 cut(s) 166
BssMI GATC 7 cut(s) 139, 208, 634, 748, 883, 1179, 1225
Bst2UI CCWGG 2 cut(s) 168, 717
Bst4CI ACNGT 1 cut(s) 955
Bst6I CTCTTC 1 cut(s) 224
BstC8I GCNNGC 2 cut(s) 1136, 1140
BstDEI CTNAG 4 cut(s) 23, 638, 917, 1025
BstEII GGTNACC 1 cut(s) 695
BstF5I GGATG 1 cut(s) 1199
BstFNI CGCG 1 cut(s) 439
BstH2I RGCGCY 2 cut(s) 927, 1068
BstHHI GCGC 3 cut(s) 441, 926, 1067
BstKTI GATC 7 cut(s) 142, 211, 637, 751, 886, 1182, 1228
BstMBI GATC 7 cut(s) 139, 208, 634, 748, 883, 1179, 1225
BstMWI GCNNNNNNNGC 2 cut(s) 726, 1062
BstNI CCWGG 2 cut(s) 168, 717
BstPI GGTNACC 1 cut(s) 695
BstSCI CCNGG 2 cut(s) 166, 715
BstSFI CTRYAG 1 cut(s) 1150
BstUI CGCG 1 cut(s) 439
BstV2I GAAGAC 1 cut(s) 712
BstX2I RGATCY 3 cut(s) 139, 634, 1225
BstYI RGATCY 3 cut(s) 139, 634, 1225
BtsCI GGATG 1 cut(s) 1199
BtsI GCAGTG 1 cut(s) 90
BtsIMutI CAGTG 4 cut(s) 31, 90, 758, 1237
Cac8I GCNNGC 2 cut(s) 1136, 1140
CfoI GCGC 3 cut(s) 441, 926, 1067
Cfr10I RCCGGY 1 cut(s) 820
Cfr13I GGNCC 1 cut(s) 233
CseI GACGC 1 cut(s) 818
Csp6I GTAC 3 cut(s) 118, 173, 1049
CspAI ACCGGT 1 cut(s) 820
CviAII CATG 7 cut(s) 185, 212, 375, 553, 761, 840, 1052
CviQI GTAC 3 cut(s) 118, 173, 1049
DdeI CTNAG 4 cut(s) 23, 638, 917, 1025
DpnI GATC 7 cut(s) 141, 210, 636, 750, 885, 1181, 1227
DpnII GATC 7 cut(s) 139, 208, 634, 748, 883, 1179, 1225
DraI TTTAAA 2 cut(s) 795, 1104
Eam1104I CTCTTC 1 cut(s) 224
EarI CTCTTC 1 cut(s) 224
Eco47I GGWCC 1 cut(s) 233
Eco57I CTGAAG 2 cut(s) 872, 908
Eco91I GGTNACC 1 cut(s) 695
EcoO65I GGTNACC 1 cut(s) 695
EcoRII CCWGG 2 cut(s) 166, 715
FaeI CATG 7 cut(s) 188, 215, 378, 556, 764, 843, 1055
FalI AAGNNNNNCTT 2 cut(s) 913, 945
FaqI GGGAC 1 cut(s) 981
FatI CATG 7 cut(s) 184, 211, 374, 552, 760, 839, 1051
FbaI TGATCA 2 cut(s) 208, 748
FokI GGATG 1 cut(s) 1186
FspBI CTAG 3 cut(s) 620, 726, 1079
GlaI GCGC 3 cut(s) 440, 925, 1066
HaeII RGCGCY 2 cut(s) 927, 1068
HapII CCGG 1 cut(s) 821
HgaI GACGC 1 cut(s) 818
HhaI GCGC 3 cut(s) 441, 926, 1067
Hin1II CATG 7 cut(s) 188, 215, 378, 556, 764, 843, 1055
Hin6I GCGC 3 cut(s) 439, 924, 1065
HinP1I GCGC 3 cut(s) 439, 924, 1065
HindIII AAGCTT 2 cut(s) 251, 740
HinfI GANTC 3 cut(s) 298, 598, 606
HpaII CCGG 1 cut(s) 821
HphI GGTGA 5 cut(s) 565, 707, 824, 1000, 1101
Hpy166II GTNNAC 2 cut(s) 333, 991
Hpy188I TCNGA 8 cut(s) 237, 605, 648, 852, 888, 918, 1028, 1230
Hpy188III TCNNGA 8 cut(s) 137, 312, 392, 457, 583, 773, 962, 1160
Hpy8I GTNNAC 2 cut(s) 333, 991
HpyAV CCTTC 6 cut(s) 233, 381, 626, 883, 923, 1117
HpyCH4III ACNGT 1 cut(s) 955
HpyCH4IV ACGT 1 cut(s) 443
HpyCH4V TGCA 6 cut(s) 593, 847, 1036, 1134, 1142, 1208
HpyF10VI GCNNNNNNNGC 2 cut(s) 726, 1062
HpyF3I CTNAG 4 cut(s) 23, 638, 917, 1025
HpySE526I ACGT 1 cut(s) 443
Hsp92II CATG 7 cut(s) 188, 215, 378, 556, 764, 843, 1055
HspAI GCGC 3 cut(s) 439, 924, 1065
Ksp22I TGATCA 2 cut(s) 208, 748
Kzo9I GATC 7 cut(s) 139, 208, 634, 748, 883, 1179, 1225
LguI GCTCTTC 1 cut(s) 224
LweI GCATC 5 cut(s) 357, 580, 856, 1065, 1151
MaeI CTAG 3 cut(s) 620, 726, 1079
MaeII ACGT 1 cut(s) 443
MaeIII GTNAC 4 cut(s) 26, 43, 695, 812
MalI GATC 7 cut(s) 141, 210, 636, 750, 885, 1181, 1227
MboI GATC 7 cut(s) 139, 208, 634, 748, 883, 1179, 1225
MboII GAAGA 4 cut(s) 211, 293, 478, 717
MfeI CAATTG 1 cut(s) 519
MflI RGATCY 3 cut(s) 139, 634, 1225
MhlI GDGCHC 2 cut(s) 219, 760
MmeI TCCRAC 1 cut(s) 1045
MroXI GAANNNNTTC 1 cut(s) 329
MseI TTAA 8 cut(s) 270, 339, 656, 683, 794, 1103, 1169, 1188
MslI CAYNNNNRTG 1 cut(s) 194
MspI CCGG 1 cut(s) 821
MspR9I CCNGG 2 cut(s) 168, 717
MunI CAATTG 1 cut(s) 519
MvaI CCWGG 2 cut(s) 168, 717
MvnI CGCG 1 cut(s) 439
MwoI GCNNNNNNNGC 2 cut(s) 726, 1062
NdeII GATC 7 cut(s) 139, 208, 634, 748, 883, 1179, 1225
NlaIII CATG 7 cut(s) 188, 215, 378, 556, 764, 843, 1055
NlaIV GGNNCC 2 cut(s) 277, 1227
NmuCI GTSAC 3 cut(s) 26, 695, 812
PciSI GCTCTTC 1 cut(s) 224
PdmI GAANNNNTTC 1 cut(s) 329
PfeI GAWTC 3 cut(s) 298, 598, 606
PinAI ACCGGT 1 cut(s) 820
PsiI TTATAA 1 cut(s) 180
Psp6I CCWGG 2 cut(s) 166, 715
PspEI GGTNACC 1 cut(s) 695
PspGI CCWGG 2 cut(s) 166, 715
PspN4I GGNNCC 2 cut(s) 277, 1227
PspPI GGNCC 1 cut(s) 233
PsuI RGATCY 3 cut(s) 139, 634, 1225
RsaI GTAC 3 cut(s) 119, 174, 1050
RsaNI GTAC 3 cut(s) 118, 173, 1049
RseI CAYNNNNRTG 1 cut(s) 194
SapI GCTCTTC 1 cut(s) 224
SaqAI TTAA 8 cut(s) 270, 339, 656, 683, 794, 1103, 1169, 1188
Sau3AI GATC 7 cut(s) 139, 208, 634, 748, 883, 1179, 1225
Sau96I GGNCC 1 cut(s) 233
ScaI AGTACT 1 cut(s) 174
ScrFI CCNGG 2 cut(s) 168, 717
SduI GDGCHC 2 cut(s) 219, 760
SfaNI GCATC 5 cut(s) 357, 580, 856, 1065, 1151
SfcI CTRYAG 1 cut(s) 1150
SinI GGWCC 1 cut(s) 233
SmiMI CAYNNNNRTG 1 cut(s) 194
SmlI CTYRAG 3 cut(s) 581, 737, 1118
SmoI CTYRAG 3 cut(s) 581, 737, 1118
SsiI CCGC 2 cut(s) 279, 437
SspI AATATT 1 cut(s) 545
SspMI CTAG 3 cut(s) 620, 726, 1079
StyD4I CCNGG 2 cut(s) 166, 715
TaaI ACNGT 1 cut(s) 955
TaiI ACGT 1 cut(s) 446
TatI WGTACW 2 cut(s) 172, 1048
TfiI GAWTC 3 cut(s) 298, 598, 606
Tru1I TTAA 8 cut(s) 270, 339, 656, 683, 794, 1103, 1169, 1188
Tru9I TTAA 8 cut(s) 270, 339, 656, 683, 794, 1103, 1169, 1188
TscAI CASTG 3 cut(s) 31, 90, 758
TseFI GTSAC 3 cut(s) 26, 695, 812
Tsp45I GTSAC 3 cut(s) 26, 695, 812
TspDTI ATGAA 7 cut(s) 89, 168, 293, 338, 363, 392, 1075
TspGWI ACGGA 1 cut(s) 62
TspRI CASTG 3 cut(s) 31, 90, 758
VpaK11BI GGWCC 1 cut(s) 233
XapI RAATTY 3 cut(s) 316, 1015, 1105
XmnI GAANNNNTTC 1 cut(s) 329
XspI CTAG 3 cut(s) 620, 726, 1079
ZrmI AGTACT 1 cut(s) 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.