MD05G1157800.v1.1

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000103
Physical Location & Seq
Forward (+)
28721498 .. 28723716
2219 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1157800.v1.1.491

Sequence Viewer

Length: 1278 bp
ATGATGGAAAGAGAACCGCCCAAGTCCCGTTTGAAAGTGTCAATGGAGTTGGACAGAATTAGCAACTTACCAAGTGACTTTATAAACAAAATTTTGTCATATTTGCCAATTAGGGAAGCAGTTAGAACAAGTGTTTTATCAAGCAAGTGGAGGAACAAATCGGCTATGCTTACTCATCTTTTGTTTGATGATCGGTGCACCTCGGATCAAAACCCTACAACCTTTGCAGGCATTGTTGATCATGTACTCTTGGGTCACATTGGCCCCATTTACAGGTTCGCGATCACTCATTTCCGACCTCAAGTCGGTAGAGATATTGATCGATGGATTCTTCATCTGTCAAGAAACTCTATCAAAGAGTTGGGGCTTAATATCGGCTGTGGTGGGCATCGCTACAAGATGCCTTCTTGTTTTTTTTCTTGTCAAGATCTCATTCATTTAGTGTTGTATAATTGTTTGCTACAACCTCCATCCACATTCCGAGGATTCAGGAGAGTGAAGAATTGTGGTCTTTTTAATGTTGCCTTGGACCAAGATGTGTTTGAGAATCTGATTGTTTGCTGTCCTCTCCTTGAGAGATTAAAGTTGACCCACTGTGATGGATTAACCCAGTTCAAGATTGATGCACCGAATCTTAAAGTCCTTAAGTTTGAGGGCGTACTTGAGGATGTTAGTTTTGTGAATACCTTAAAACTGGCCAATGTTCGCGTTTGTTTGACTGCTAATGTTGCAAATGACCAAAGACAGACTGCCGGAAGTTGTAGCAATTTGCTCAAGTTTTTTGTTCATCTCCCTCGTATTCAATGTCTTCATGTCAAAAATTACTTTTTAAAGTATTTGGCTGTCGGAGTCTTGCCAGGAAGGCTACCTCAACCGTGTCTATATATGAATTTTTTTTCTATACATTTAGACTTCAACGATCCGAAGGAGATTTTAACTGTTTTATGTCTGCTGAGAAGCTTCCCTGCTCTACAGGTTCTTGAAATTCTGGCCCGGAAAAAGGATCAGGCTGTTGTGGGAGACGTGAACTATGGGTTAGACAACAACCAGAATTGCCATCTGGCCAAATTGCGAATTGTGAAAACAACCGGCATCTCTGGTGTCAAAGCTGAACTAGATTTCATCAGGCTTTTGCTTTCAAGTTCACCTGTGCTCGAGAAGATGATTGTGAAGCCTGCTGCTACTAATGATTTTCAACTAGTAAATAAGTTGCTCCAAAAGTTGCTCCAGTTTAAGCGTGTCTCGGAGAATGCAAAGATATTCTACGTAGACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

426

Amino Acids

48.37

Weight (kDa)

9.29

Isoelectric Point (pI)

40.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 53 9.8e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 104 - 394 1.1e-11 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 106 - 329 5.1e-17 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 83
AccI GTMKAC 1 cut(s) 1269
AccII CGCG 2 cut(s) 281, 708
AciI CCGC 1 cut(s) 17
AclWI GGATC 3 cut(s) 213, 914, 1011
AcoI YGGCCR 2 cut(s) 696, 1062
AcsI RAATTY 3 cut(s) 90, 889, 984
AfaI GTAC 2 cut(s) 246, 660
AfiI CCNNNNNNNGG 3 cut(s) 273, 305, 1000
AflII CTTAAG 1 cut(s) 644
AgsI TTSAA 7 cut(s) 34, 616, 803, 916, 983, 1140, 1196
AhdI GACNNNNNGTC 1 cut(s) 302
AhlI ACTAGT 1 cut(s) 1198
AjiI CACGTC 1 cut(s) 1024
AjnI CCWGG 1 cut(s) 856
AluBI AGCT 2 cut(s) 960, 1109
AluI AGCT 2 cut(s) 960, 1109
Alw21I GWGCWC 2 cut(s) 200, 1155
Alw26I GTCTC 2 cut(s) 1014, 1246
Alw44I GTGCAC 1 cut(s) 196
AlwI GGATC 3 cut(s) 213, 914, 1011
Ama87I CYCGRG 1 cut(s) 1154
AoxI GGCC 4 cut(s) 262, 696, 990, 1062
ApaLI GTGCAC 1 cut(s) 196
ApeKI GCWGC 1 cut(s) 1178
ApoI RAATTY 3 cut(s) 90, 889, 984
AspS9I GGNCC 3 cut(s) 263, 529, 991
AsuC2I CCSGG 1 cut(s) 994
AsuHPI GGTGA 1 cut(s) 1137
AvaI CYCGRG 1 cut(s) 1154
AvaII GGWCC 1 cut(s) 529
BaeGI GKGCMC 1 cut(s) 200
BalI TGGCCA 2 cut(s) 698, 1064
BbsI GAAGAC 1 cut(s) 800
Bbv12I GWGCWC 2 cut(s) 200, 1155
BbvI GCAGC 1 cut(s) 1165
BccI CCATC 4 cut(s) 318, 478, 593, 1065
BciT130I CCWGG 1 cut(s) 858
BclI TGATCA 1 cut(s) 238
BcnI CCSGG 1 cut(s) 994
BcoDI GTCTC 2 cut(s) 1014, 1246
BcuI ACTAGT 1 cut(s) 1198
BfaI CTAG 2 cut(s) 1115, 1199
BfmI CTRYAG 1 cut(s) 971
BfrI CTTAAG 1 cut(s) 644
BglI GCCNNNNNGGC 1 cut(s) 862
BglII AGATCT 1 cut(s) 427
BisI GCNGC 1 cut(s) 1179
BlsI GCNGC 1 cut(s) 1180
Bme1390I CCNGG 2 cut(s) 858, 994
Bme18I GGWCC 1 cut(s) 529
BmeRI GACNNNNNGTC 1 cut(s) 302
BmeT110I CYCGRG 1 cut(s) 1154
BmgBI CACGTC 1 cut(s) 1024
BmgT120I GGNCC 3 cut(s) 263, 529, 991
BmiI GGNNCC 1 cut(s) 265
BmrFI CCNGG 2 cut(s) 858, 994
BmrI ACTGGG 1 cut(s) 604
BmsI GCATC 4 cut(s) 390, 397, 613, 1101
BmuI ACTGGG 1 cut(s) 604
BpiI GAAGAC 1 cut(s) 800
BpmI CTGGAG 1 cut(s) 1211
BpuEI CTTGAG 4 cut(s) 285, 593, 683, 758
BpuMI CCSGG 1 cut(s) 994
Bsa29I ATCGAT 1 cut(s) 322
BsaAI YACGTR 1 cut(s) 1267
BsaBI GATNNNNATC 1 cut(s) 318
BsaJI CCNNGG 3 cut(s) 201, 481, 525
Bsc4I CCNNNNNNNGG 3 cut(s) 273, 305, 1000
Bse118I RCCGGY 1 cut(s) 1088
Bse1I ACTGG 3 cut(s) 610, 699, 1228
Bse8I GATNNNNATC 1 cut(s) 318
BseBI CCWGG 1 cut(s) 858
BseCI ATCGAT 1 cut(s) 322
BseDI CCNNGG 3 cut(s) 201, 481, 525
BseGI GGATG 2 cut(s) 470, 673
BseJI GATNNNNATC 1 cut(s) 318
BseLI CCNNNNNNNGG 3 cut(s) 273, 305, 1000
BseMII CTCAG 1 cut(s) 944
BseNI ACTGG 3 cut(s) 610, 699, 1228
BseSI GKGCMC 1 cut(s) 200
BseXI GCAGC 1 cut(s) 1165
Bsh1236I CGCG 2 cut(s) 281, 708
BshFI GGCC 4 cut(s) 264, 698, 992, 1064
BshVI ATCGAT 1 cut(s) 322
BsiHKAI GWGCWC 2 cut(s) 200, 1155
BsiHKCI CYCGRG 1 cut(s) 1154
BsiSI CCGG 3 cut(s) 753, 994, 1089
BslFI GGGAC 1 cut(s) 10
BslI CCNNNNNNNGG 3 cut(s) 273, 305, 1000
BsmAI GTCTC 2 cut(s) 1014, 1246
BsmBI CGTCTC 1 cut(s) 1014
BsmFI GGGAC 1 cut(s) 10
BsmI GAATGC 1 cut(s) 1255
BsnI GGCC 4 cut(s) 264, 698, 992, 1064
BsoBI CYCGRG 1 cut(s) 1154
Bsp1286I GDGCHC 2 cut(s) 200, 1155
Bsp143I GATC 8 cut(s) 190, 205, 238, 282, 319, 427, 919, 1003
Bsp68I TCGCGA 1 cut(s) 281
BspACI CCGC 1 cut(s) 17
BspANI GGCC 4 cut(s) 264, 698, 992, 1064
BspCNI CTCAG 1 cut(s) 945
BspDI ATCGAT 1 cut(s) 322
BspFNI CGCG 2 cut(s) 281, 708
BspLI GGNNCC 1 cut(s) 265
BspPI GGATC 3 cut(s) 213, 914, 1011
BspTI CTTAAG 1 cut(s) 644
BsrFI RCCGGY 1 cut(s) 1088
BsrI ACTGG 3 cut(s) 610, 699, 1228
BssAI RCCGGY 1 cut(s) 1088
BssECI CCNNGG 3 cut(s) 201, 481, 525
BssMI GATC 8 cut(s) 190, 205, 238, 282, 319, 427, 919, 1003
BssT1I CCWWGG 1 cut(s) 525
Bst2UI CCWGG 1 cut(s) 858
Bst4CI ACNGT 3 cut(s) 596, 876, 940
BstAFI CTTAAG 1 cut(s) 644
BstBAI YACGTR 1 cut(s) 1267
BstC8I GCNNGC 2 cut(s) 229, 1176
BstDEI CTNAG 1 cut(s) 953
BstF5I GGATG 2 cut(s) 470, 673
BstFNI CGCG 2 cut(s) 281, 708
BstKTI GATC 8 cut(s) 193, 208, 241, 285, 322, 430, 922, 1006
BstMAI GTCTC 2 cut(s) 1014, 1246
BstMBI GATC 8 cut(s) 190, 205, 238, 282, 319, 427, 919, 1003
BstMWI GCNNNNNNNGC 2 cut(s) 728, 862
BstNI CCWGG 1 cut(s) 858
BstSCI CCNGG 2 cut(s) 856, 992
BstSFI CTRYAG 1 cut(s) 971
BstSLI GKGCMC 1 cut(s) 200
BstSNI TACGTA 1 cut(s) 1267
BstUI CGCG 2 cut(s) 281, 708
BstV1I GCAGC 1 cut(s) 1165
BstV2I GAAGAC 1 cut(s) 800
BstX2I RGATCY 1 cut(s) 427
BstXI CCANNNNNNTGG 1 cut(s) 599
BstYI RGATCY 1 cut(s) 427
Bsu15I ATCGAT 1 cut(s) 322
BsuRI GGCC 4 cut(s) 264, 698, 992, 1064
BsuTUI ATCGAT 1 cut(s) 322
BtgZI GCGATG 1 cut(s) 374
BtrI CACGTC 1 cut(s) 1024
BtsCI GGATG 2 cut(s) 470, 673
BtsIMutI CAGTG 1 cut(s) 592
BtuMI TCGCGA 1 cut(s) 281
Cac8I GCNNGC 2 cut(s) 229, 1176
Cfr10I RCCGGY 1 cut(s) 1088
Cfr13I GGNCC 3 cut(s) 263, 529, 991
ClaI ATCGAT 1 cut(s) 322
Csp6I GTAC 2 cut(s) 245, 659
CviAII CATG 2 cut(s) 242, 812
CviQI GTAC 2 cut(s) 245, 659
DdeI CTNAG 1 cut(s) 953
DpnI GATC 8 cut(s) 192, 207, 240, 284, 321, 429, 921, 1005
DpnII GATC 8 cut(s) 190, 205, 238, 282, 319, 427, 919, 1003
DraI TTTAAA 1 cut(s) 831
DriI GACNNNNNGTC 1 cut(s) 302
EaeI YGGCCR 2 cut(s) 696, 1062
Eam1105I GACNNNNNGTC 1 cut(s) 302
Eco105I TACGTA 1 cut(s) 1267
Eco130I CCWWGG 1 cut(s) 525
Eco47I GGWCC 1 cut(s) 529
Eco88I CYCGRG 1 cut(s) 1154
EcoRII CCWGG 1 cut(s) 856
EcoT14I CCWWGG 1 cut(s) 525
ErhI CCWWGG 1 cut(s) 525
Esp3I CGTCTC 1 cut(s) 1014
FaeI CATG 2 cut(s) 245, 815
FaqI GGGAC 1 cut(s) 10
FatI CATG 2 cut(s) 241, 811
FbaI TGATCA 1 cut(s) 238
FblI GTMKAC 1 cut(s) 1269
Fnu4HI GCNGC 1 cut(s) 1179
FokI GGATG 2 cut(s) 457, 680
Fsp4HI GCNGC 1 cut(s) 1179
FspBI CTAG 2 cut(s) 1115, 1199
GluI GCNGC 1 cut(s) 1179
GsuI CTGGAG 1 cut(s) 1211
HaeIII GGCC 4 cut(s) 264, 698, 992, 1064
HapII CCGG 3 cut(s) 753, 994, 1089
Hin1II CATG 2 cut(s) 245, 815
HincII GTYRAC 1 cut(s) 588
HindII GTYRAC 1 cut(s) 588
HindIII AAGCTT 1 cut(s) 958
HinfI GANTC 5 cut(s) 328, 486, 547, 631, 849
HpaII CCGG 3 cut(s) 753, 994, 1089
HphI GGTGA 1 cut(s) 1137
Hpy166II GTNNAC 5 cut(s) 198, 588, 1027, 1145, 1270
Hpy188I TCNGA 7 cut(s) 205, 296, 482, 552, 848, 924, 1246
Hpy188III TCNNGA 7 cut(s) 280, 342, 425, 490, 616, 980, 1156
Hpy8I GTNNAC 5 cut(s) 198, 588, 1027, 1145, 1270
HpyAV CCTTC 3 cut(s) 414, 855, 919
HpyCH4III ACNGT 3 cut(s) 596, 876, 940
HpyCH4IV ACGT 2 cut(s) 1023, 1266
HpyCH4V TGCA 5 cut(s) 198, 227, 626, 731, 1253
HpyF10VI GCNNNNNNNGC 2 cut(s) 728, 862
HpyF3I CTNAG 1 cut(s) 953
HpySE526I ACGT 2 cut(s) 1023, 1266
Hsp92II CATG 2 cut(s) 245, 815
Ksp22I TGATCA 1 cut(s) 238
Kzo9I GATC 8 cut(s) 190, 205, 238, 282, 319, 427, 919, 1003
LmnI GCTCC 2 cut(s) 1218, 1230
Lsp1109I GCAGC 1 cut(s) 1165
LweI GCATC 4 cut(s) 390, 397, 613, 1101
MaeI CTAG 2 cut(s) 1115, 1199
MaeII ACGT 2 cut(s) 1023, 1266
MaeIII GTNAC 2 cut(s) 74, 254
MalI GATC 8 cut(s) 192, 207, 240, 284, 321, 429, 921, 1005
MboI GATC 8 cut(s) 190, 205, 238, 282, 319, 427, 919, 1003
MboII GAAGA 4 cut(s) 323, 511, 800, 1171
MflI RGATCY 1 cut(s) 427
MhlI GDGCHC 2 cut(s) 200, 1155
MlsI TGGCCA 2 cut(s) 698, 1064
MluNI TGGCCA 2 cut(s) 698, 1064
MlyI GAGTC 1 cut(s) 858
MmeI TCCRAC 3 cut(s) 30, 319, 826
Mox20I TGGCCA 2 cut(s) 698, 1064
MscI TGGCCA 2 cut(s) 698, 1064
MslI CAYNNNNRTG 1 cut(s) 597
Msp20I TGGCCA 2 cut(s) 698, 1064
MspCI CTTAAG 1 cut(s) 644
MspI CCGG 3 cut(s) 753, 994, 1089
MspR9I CCNGG 2 cut(s) 858, 994
Mva1269I GAATGC 1 cut(s) 1255
MvaI CCWGG 1 cut(s) 858
MvnI CGCG 2 cut(s) 281, 708
MwoI GCNNNNNNNGC 2 cut(s) 728, 862
NciI CCSGG 1 cut(s) 994
NdeII GATC 8 cut(s) 190, 205, 238, 282, 319, 427, 919, 1003
NlaIII CATG 2 cut(s) 245, 815
NlaIV GGNNCC 1 cut(s) 265
NmuCI GTSAC 2 cut(s) 74, 254
NruI TCGCGA 1 cut(s) 281
PaeR7I CTCGAG 1 cut(s) 1154
PctI GAATGC 1 cut(s) 1255
PfeI GAWTC 4 cut(s) 328, 486, 547, 631
PkrI GCNGC 1 cut(s) 1180
PleI GAGTC 1 cut(s) 857
PpsI GAGTC 1 cut(s) 857
Ppu21I YACGTR 1 cut(s) 1267
PsiI TTATAA 1 cut(s) 83
Psp6I CCWGG 1 cut(s) 856
PspGI CCWGG 1 cut(s) 856
PspN4I GGNNCC 1 cut(s) 265
PspPI GGNCC 3 cut(s) 263, 529, 991
PsuI RGATCY 1 cut(s) 427
RruI TCGCGA 1 cut(s) 281
RsaI GTAC 2 cut(s) 246, 660
RsaNI GTAC 2 cut(s) 245, 659
RseI CAYNNNNRTG 1 cut(s) 597
SatI GCNGC 1 cut(s) 1179
Sau3AI GATC 8 cut(s) 190, 205, 238, 282, 319, 427, 919, 1003
Sau96I GGNCC 3 cut(s) 263, 529, 991
SchI GAGTC 1 cut(s) 858
ScrFI CCNGG 2 cut(s) 858, 994
SduI GDGCHC 2 cut(s) 200, 1155
SfaNI GCATC 4 cut(s) 390, 397, 613, 1101
SfcI CTRYAG 1 cut(s) 971
Sfr274I CTCGAG 1 cut(s) 1154
SinI GGWCC 1 cut(s) 529
SlaI CTCGAG 1 cut(s) 1154
SmiMI CAYNNNNRTG 1 cut(s) 597
SmlI CTYRAG 6 cut(s) 300, 572, 644, 662, 773, 1154
SmoI CTYRAG 6 cut(s) 300, 572, 644, 662, 773, 1154
SnaBI TACGTA 1 cut(s) 1267
SpeI ACTAGT 1 cut(s) 1198
SsiI CCGC 1 cut(s) 17
SspMI CTAG 2 cut(s) 1115, 1199
StyD4I CCNGG 2 cut(s) 856, 992
StyI CCWWGG 1 cut(s) 525
TaaI ACNGT 3 cut(s) 596, 876, 940
TaiI ACGT 2 cut(s) 1026, 1269
TaqI TCGA 2 cut(s) 322, 1155
TatI WGTACW 1 cut(s) 244
TfiI GAWTC 4 cut(s) 328, 486, 547, 631
TscAI CASTG 1 cut(s) 599
TseFI GTSAC 2 cut(s) 74, 254
TseI GCWGC 1 cut(s) 1178
Tsp45I GTSAC 2 cut(s) 74, 254
TspDTI ATGAA 6 cut(s) 323, 425, 776, 800, 902, 1111
TspRI CASTG 1 cut(s) 599
Vha464I CTTAAG 1 cut(s) 644
VneI GTGCAC 1 cut(s) 196
VpaK11BI GGWCC 1 cut(s) 529
XapI RAATTY 3 cut(s) 90, 889, 984
XhoI CTCGAG 1 cut(s) 1154
XmiI GTMKAC 1 cut(s) 1269
XspI CTAG 2 cut(s) 1115, 1199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.