FvH4_2g27100

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000103
Physical Location & Seq
Forward (+)
21600299 .. 21602140
1842 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g27100.t1

Sequence Viewer

Length: 1260 bp
ATGGAGTTGGATAGAATTAGCGACATGCCAAGTGATGTTAGAGTAAAGATATCGTCAAGTTTGCCAATTAGGGATGCAGTGAGGACGAGTGTTTTATCAACTAACTGGAGGTACATATCGGCTATGCTACCACATCTGGTTTTTTATGCCCATTCTATCTCAACTCTGCCACAAAAATTTGCGAATGCTGTTGATCATGTTCTCTTAAGTCACATTGGCCCTGTATACAAGTTCAAGCTTGCTCCAAAACATATATGTGTTAGAGATTTTGATCGGTGGATACTGTATGTCTCTAGAAACTCCATCAAAGAGTTCATACTTGAAATCTTGGGACAGCCGTACTATAAGCTGCCTTCATCTATGTTTCTGTGTCGAGATTTGACTCATTTAGAGTTGCATAAATGTTTGCTACAACCGCCGTCCACATTCACAGGCTTCAAAAGTTTGAAAACCCTAAAAATTGTTTGGGTTAGGCTGACGGGTGATGCGCTTCAAAACATGATTGCTCACTGTCCTCTACTTGAGCGGTTGGTTGTGGAGGATTGTGATGATTTCAACCAGCTCAATATCAATGCACCAAGTCTCCAGGTTCTTCGCTTTATTGGTGGGTTTAAGTACATTAATTTATTGAATACATCAAATATCGTTGATGTTTATATTGAGCTATATCAGTTTGCTTGCAAATCTAGTAATCTGCTCAGGTTTTTTGCTCAACTTCCCAATATTCACCGTCTTTGCATGAAGGCCAAATTTACAAAGTATTTAGCTGATAGCTGCTTGCCGCTGGAAAAGCTGCCGAAACCATGTTCACCTCTACAATTTCTTTCTTTAAGGATCGGGACTGATTATGATAAGGACATTCTTCTTTGCATTCTGAGAATGTGCCCTGCTCTGGAAGAATTAGAAGTTTTCGCTTCTAATTATAAAGCCATAGGGGGAAAAGTGAACTCTTGGGTTGATGAACATCATAGTTGCTCGAACACTCAGCTTGGACGTGTGAAAATACACTGCAGCTTCCCTGAGGTTGATGGTGCACTGGAATTGATAAGATTTCTGCTTTTAAGTTCACCAGCGCTTGAGACAATGACTCTATGTACCACCGCTCTGCATCCTTTTGTTAGTTATAATCTAGCTACAAAGTTGCTAGGATTATGGCGTGCATCACTGAATTTAGAGATGATTCTAAATGACAACGTTCTTTTATTTCCGAAATATAACTATGGTACCTCTTTCTATGATGATGTAATGTCTGTCTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

420

Amino Acids

47.91

Weight (kDa)

8.44

Isoelectric Point (pI)

46.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 43 6.9e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 83 - 369 4.4e-16 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 91 - 302 1.3e-14 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 924, 1125
Acc65I GGTACC 1 cut(s) 1223
AccB1I GGYRCC 1 cut(s) 1223
AccBSI CCGCTC 2 cut(s) 526, 1103
AccI GTMKAC 1 cut(s) 225
AciI CCGC 4 cut(s) 416, 526, 782, 1101
AclI AACGTT 1 cut(s) 1194
AclWI GGATC 1 cut(s) 842
AcsI RAATTY 3 cut(s) 176, 749, 1168
AfaI GTAC 5 cut(s) 113, 341, 617, 1096, 1225
AfeI AGCGCT 1 cut(s) 1074
AfiI CCNNNNNNNGG 1 cut(s) 892
AflII CTTAAG 1 cut(s) 205
AflIII ACRYGT 1 cut(s) 994
AgsI TTSAA 7 cut(s) 235, 323, 439, 448, 494, 556, 631
AjiI CACGTC 1 cut(s) 995
AjnI CCWGG 1 cut(s) 585
Alw21I GWGCWC 1 cut(s) 1036
Alw26I GTCTC 3 cut(s) 295, 587, 1073
Alw44I GTGCAC 1 cut(s) 1032
AlwI GGATC 1 cut(s) 842
Aor51HI AGCGCT 1 cut(s) 1074
AoxI GGCC 2 cut(s) 217, 744
ApaLI GTGCAC 1 cut(s) 1032
ApeKI GCWGC 4 cut(s) 349, 774, 793, 1011
ApoI RAATTY 3 cut(s) 176, 749, 1168
AseI ATTAAT 1 cut(s) 621
Asp718I GGTACC 1 cut(s) 1223
AspLEI GCGC 2 cut(s) 490, 1075
AspS9I GGNCC 1 cut(s) 218
AsuHPI GGTGA 4 cut(s) 494, 719, 801, 1059
AxyI CCTNAGG 1 cut(s) 1020
BaeGI GKGCMC 2 cut(s) 887, 1036
BaeI ACNNNNGTAYC 2 cut(s) 1207, 1240
BanI GGYRCC 1 cut(s) 1223
BbsI GAAGAC 1 cut(s) 1246
Bbv12I GWGCWC 1 cut(s) 1036
BbvI GCAGC 4 cut(s) 336, 761, 780, 1023
BccI CCATC 2 cut(s) 311, 1022
BceAI ACGGC 2 cut(s) 322, 403
BciT130I CCWGG 1 cut(s) 587
BciVI GTATCC 1 cut(s) 273
BclI TGATCA 1 cut(s) 193
BcoDI GTCTC 3 cut(s) 295, 587, 1073
BfaI CTAG 4 cut(s) 294, 687, 1130, 1145
BfmI CTRYAG 1 cut(s) 1009
BfoI RGCGCY 1 cut(s) 1076
BfrI CTTAAG 1 cut(s) 205
BfuI GTATCC 1 cut(s) 273
BisI GCNGC 5 cut(s) 350, 775, 782, 794, 1012
BlsI GCNGC 5 cut(s) 351, 776, 783, 795, 1013
Bme1390I CCNGG 1 cut(s) 587
BmgBI CACGTC 1 cut(s) 995
BmgT120I GGNCC 1 cut(s) 218
BmiI GGNNCC 1 cut(s) 1225
BmrFI CCNGG 1 cut(s) 587
BmsI GCATC 4 cut(s) 64, 475, 1117, 1169
BpiI GAAGAC 1 cut(s) 1246
BpmI CTGGAG 2 cut(s) 127, 569
Bpu10I CCTNAGC 1 cut(s) 698
BpuEI CTTGAG 2 cut(s) 542, 1097
BsaBI GATNNNNATC 2 cut(s) 270, 963
BsaXI ACNNNNNCTCC 2 cut(s) 567, 597
Bsc4I CCNNNNNNNGG 1 cut(s) 892
Bse1I ACTGG 2 cut(s) 110, 1041
Bse21I CCTNAGG 1 cut(s) 1020
Bse8I GATNNNNATC 2 cut(s) 270, 963
BseBI CCWGG 1 cut(s) 587
BseGI GGATG 2 cut(s) 79, 1108
BseJI GATNNNNATC 2 cut(s) 270, 963
BseLI CCNNNNNNNGG 1 cut(s) 892
BseMII CTCAG 4 cut(s) 712, 866, 998, 1011
BseNI ACTGG 2 cut(s) 110, 1041
BseSI GKGCMC 2 cut(s) 887, 1036
BseXI GCAGC 4 cut(s) 336, 761, 780, 1023
BshFI GGCC 2 cut(s) 219, 746
BshNI GGYRCC 1 cut(s) 1223
BsiHKAI GWGCWC 1 cut(s) 1036
BslFI GGGAC 2 cut(s) 345, 853
BslI CCNNNNNNNGG 1 cut(s) 892
BsmAI GTCTC 3 cut(s) 295, 587, 1073
BsmFI GGGAC 2 cut(s) 345, 853
BsmI GAATGC 2 cut(s) 190, 870
BsnI GGCC 2 cut(s) 219, 746
Bsp1286I GDGCHC 2 cut(s) 887, 1036
Bsp143I GATC 3 cut(s) 193, 271, 834
BspACI CCGC 4 cut(s) 416, 526, 782, 1101
BspANI GGCC 2 cut(s) 219, 746
BspCNI CTCAG 4 cut(s) 711, 867, 997, 1012
BspLI GGNNCC 1 cut(s) 1225
BspMAI CTGCAG 1 cut(s) 1013
BspPI GGATC 1 cut(s) 842
BspT107I GGYRCC 1 cut(s) 1223
BspTI CTTAAG 1 cut(s) 205
BsrBI CCGCTC 2 cut(s) 526, 1103
BsrI ACTGG 2 cut(s) 110, 1041
BssMI GATC 3 cut(s) 193, 271, 834
BssNAI GTATAC 1 cut(s) 226
Bst1107I GTATAC 1 cut(s) 226
Bst2UI CCWGG 1 cut(s) 587
Bst4CI ACNGT 3 cut(s) 285, 512, 731
BstAFI CTTAAG 1 cut(s) 205
BstC8I GCNNGC 4 cut(s) 240, 679, 779, 1158
BstDEI CTNAG 4 cut(s) 698, 875, 984, 1020
BstF5I GGATG 2 cut(s) 79, 1108
BstH2I RGCGCY 1 cut(s) 1076
BstHHI GCGC 2 cut(s) 490, 1075
BstKTI GATC 3 cut(s) 196, 274, 837
BstMAI GTCTC 3 cut(s) 295, 587, 1073
BstMBI GATC 3 cut(s) 193, 271, 834
BstMWI GCNNNNNNNGC 2 cut(s) 415, 790
BstNI CCWGG 1 cut(s) 587
BstNSI RCATGY 1 cut(s) 28
BstSCI CCNGG 1 cut(s) 585
BstSFI CTRYAG 1 cut(s) 1009
BstSLI GKGCMC 2 cut(s) 887, 1036
BstV1I GCAGC 4 cut(s) 336, 761, 780, 1023
BstV2I GAAGAC 1 cut(s) 1246
BstZ17I GTATAC 1 cut(s) 226
Bsu36I CCTNAGG 1 cut(s) 1020
BsuI GTATCC 1 cut(s) 273
BsuRI GGCC 2 cut(s) 219, 746
BtrI CACGTC 1 cut(s) 995
BtsCI GGATG 2 cut(s) 79, 1108
BtsI GCAGTG 2 cut(s) 84, 1006
BtsIMutI CAGTG 5 cut(s) 84, 508, 1006, 1034, 1163
Cac8I GCNNGC 4 cut(s) 240, 679, 779, 1158
CfoI GCGC 2 cut(s) 490, 1075
Cfr13I GGNCC 1 cut(s) 218
Csp6I GTAC 5 cut(s) 112, 340, 616, 1095, 1224
CviAII CATG 5 cut(s) 25, 197, 499, 739, 804
CviQI GTAC 5 cut(s) 112, 340, 616, 1095, 1224
DdeI CTNAG 4 cut(s) 698, 875, 984, 1020
DpnI GATC 3 cut(s) 195, 273, 836
DpnII GATC 3 cut(s) 193, 271, 834
Eco32I GATATC 1 cut(s) 51
Eco47III AGCGCT 1 cut(s) 1074
Eco81I CCTNAGG 1 cut(s) 1020
EcoRII CCWGG 1 cut(s) 585
EcoRV GATATC 1 cut(s) 51
FaeI CATG 5 cut(s) 28, 200, 502, 742, 807
FaqI GGGAC 2 cut(s) 345, 853
FatI CATG 5 cut(s) 24, 196, 498, 738, 803
FbaI TGATCA 1 cut(s) 193
FblI GTMKAC 1 cut(s) 225
Fnu4HI GCNGC 5 cut(s) 350, 775, 782, 794, 1012
FokI GGATG 2 cut(s) 86, 1095
Fsp4HI GCNGC 5 cut(s) 350, 775, 782, 794, 1012
FspBI CTAG 4 cut(s) 294, 687, 1130, 1145
GlaI GCGC 2 cut(s) 489, 1074
GluI GCNGC 5 cut(s) 350, 775, 782, 794, 1012
GsuI CTGGAG 2 cut(s) 127, 569
HaeII RGCGCY 1 cut(s) 1076
HaeIII GGCC 2 cut(s) 219, 746
HhaI GCGC 2 cut(s) 490, 1075
Hin1II CATG 5 cut(s) 28, 200, 502, 742, 807
Hin6I GCGC 2 cut(s) 488, 1073
HinP1I GCGC 2 cut(s) 488, 1073
HindIII AAGCTT 1 cut(s) 236
HinfI GANTC 3 cut(s) 382, 1087, 1180
HphI GGTGA 4 cut(s) 494, 719, 801, 1059
Hpy166II GTNNAC 6 cut(s) 226, 423, 809, 946, 1034, 1067
Hpy188I TCNGA 3 cut(s) 876, 1209, 1259
Hpy188III TCNNGA 4 cut(s) 294, 374, 838, 893
Hpy8I GTNNAC 6 cut(s) 226, 423, 809, 946, 1034, 1067
HpyAV CCTTC 2 cut(s) 363, 736
HpyCH4III ACNGT 3 cut(s) 285, 512, 731
HpyCH4IV ACGT 2 cut(s) 994, 1194
HpyF10VI GCNNNNNNNGC 2 cut(s) 415, 790
HpyF3I CTNAG 4 cut(s) 698, 875, 984, 1020
HpySE526I ACGT 2 cut(s) 994, 1194
Hsp92II CATG 5 cut(s) 28, 200, 502, 742, 807
HspAI GCGC 2 cut(s) 488, 1073
KpnI GGTACC 1 cut(s) 1227
Ksp22I TGATCA 1 cut(s) 193
Kzo9I GATC 3 cut(s) 193, 271, 834
LmnI GCTCC 1 cut(s) 247
Lsp1109I GCAGC 4 cut(s) 336, 761, 780, 1023
LweI GCATC 4 cut(s) 64, 475, 1117, 1169
MaeI CTAG 4 cut(s) 294, 687, 1130, 1145
MaeII ACGT 2 cut(s) 994, 1194
MaeIII GTNAC 1 cut(s) 209
MalI GATC 3 cut(s) 195, 273, 836
MbiI CCGCTC 2 cut(s) 526, 1103
MboI GATC 3 cut(s) 193, 271, 834
MboII GAAGA 4 cut(s) 584, 854, 908, 1246
MhlI GDGCHC 2 cut(s) 887, 1036
MlyI GAGTC 2 cut(s) 376, 1081
MnlI CCTC 7 cut(s) 75, 102, 525, 532, 822, 1015, 1237
MseI TTAA 5 cut(s) 206, 612, 621, 830, 1061
MslI CAYNNNNRTG 1 cut(s) 255
MspA1I CMGCKG 1 cut(s) 784
MspCI CTTAAG 1 cut(s) 205
MspR9I CCNGG 1 cut(s) 587
Mva1269I GAATGC 2 cut(s) 190, 870
MvaI CCWGG 1 cut(s) 587
MwoI GCNNNNNNNGC 2 cut(s) 415, 790
NdeII GATC 3 cut(s) 193, 271, 834
NlaIII CATG 5 cut(s) 28, 200, 502, 742, 807
NlaIV GGNNCC 1 cut(s) 1225
NmuCI GTSAC 1 cut(s) 209
NspI RCATGY 1 cut(s) 28
PctI GAATGC 2 cut(s) 190, 870
PfeI GAWTC 1 cut(s) 1180
PkrI GCNGC 5 cut(s) 351, 776, 783, 795, 1013
PleI GAGTC 2 cut(s) 376, 1081
PpsI GAGTC 2 cut(s) 376, 1081
PshBI ATTAAT 1 cut(s) 621
PsiI TTATAA 2 cut(s) 924, 1125
Psp1406I AACGTT 1 cut(s) 1194
Psp6I CCWGG 1 cut(s) 585
PspGI CCWGG 1 cut(s) 585
PspN4I GGNNCC 1 cut(s) 1225
PspPI GGNCC 1 cut(s) 218
PstI CTGCAG 1 cut(s) 1013
RsaI GTAC 5 cut(s) 113, 341, 617, 1096, 1225
RsaNI GTAC 5 cut(s) 112, 340, 616, 1095, 1224
RseI CAYNNNNRTG 1 cut(s) 255
SaqAI TTAA 5 cut(s) 206, 612, 621, 830, 1061
SatI GCNGC 5 cut(s) 350, 775, 782, 794, 1012
Sau3AI GATC 3 cut(s) 193, 271, 834
Sau96I GGNCC 1 cut(s) 218
SchI GAGTC 2 cut(s) 376, 1081
ScrFI CCNGG 1 cut(s) 587
SduI GDGCHC 2 cut(s) 887, 1036
SfaNI GCATC 4 cut(s) 64, 475, 1117, 1169
SfcI CTRYAG 1 cut(s) 1009
SmiMI CAYNNNNRTG 1 cut(s) 255
SmlI CTYRAG 3 cut(s) 205, 521, 1076
SmoI CTYRAG 3 cut(s) 205, 521, 1076
SsiI CCGC 4 cut(s) 416, 526, 782, 1101
SspI AATATT 1 cut(s) 724
SspMI CTAG 4 cut(s) 294, 687, 1130, 1145
StyD4I CCNGG 1 cut(s) 585
TaaI ACNGT 3 cut(s) 285, 512, 731
TaiI ACGT 2 cut(s) 997, 1197
TaqI TCGA 2 cut(s) 373, 977
TatI WGTACW 1 cut(s) 615
TauI GCSGC 1 cut(s) 784
TfiI GAWTC 1 cut(s) 1180
Tru1I TTAA 5 cut(s) 206, 612, 621, 830, 1061
Tru9I TTAA 5 cut(s) 206, 612, 621, 830, 1061
TscAI CASTG 5 cut(s) 84, 515, 1013, 1041, 1170
TseFI GTSAC 1 cut(s) 209
TseI GCWGC 4 cut(s) 349, 774, 793, 1011
Tsp45I GTSAC 1 cut(s) 209
TspDTI ATGAA 4 cut(s) 304, 345, 755, 975
TspRI CASTG 5 cut(s) 84, 515, 1013, 1041, 1170
Vha464I CTTAAG 1 cut(s) 205
VneI GTGCAC 1 cut(s) 1032
VspI ATTAAT 1 cut(s) 621
XapI RAATTY 3 cut(s) 176, 749, 1168
XbaI TCTAGA 1 cut(s) 293
XceI RCATGY 1 cut(s) 28
XmiI GTMKAC 1 cut(s) 225
XspI CTAG 4 cut(s) 294, 687, 1130, 1145
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.