Rmu_sc0002393.1_g000009

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002393.1
OG0000103
Physical Location & Seq
Reverse (-)
52206 .. 53759
1554 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002393.1_g000009.1.cds

Sequence Viewer

Length: 1317 bp
atggagatggatagaattagcagtttacccaatgacgtcacagaaaagattttgtcctgtttgccgcttcgggacgcggtgaggacaagtgttttatccagcaagtggaggtacaaatcggccatgcttcaagatctagaatttgatgagtgtgactgggggagaagccaaaatggagagtttgatgatgatgatgattattatcaaatccacacaacttttgtgaacatgattgatcatgtgctcttagttcatattgtccccatacgcaagttcaagctatcctgtactatggatgaggtagccccaagagatattgatcgatggattactcatctatcaagaaactctatcaaagagttgataattaatcgtgtggaagacagtgaatacaacattccattctctctgttttcatgtcgaggtcttgttcacttggagttacaattgtgttcactcaaacctccgtcaacattcaaagggttcaagagtttgaagagtcttcaactccacgttgttgacgtggcccaagatgtgtttgaaaatttgattcgttgcagtcctctgcttgagggattaacattgcgacattgtggtgtcaccaatctcaaaattgacgcaccaaatctcaaatctttagatattatcggtgtctttgatgttgtcaaccttaaaagtaccctaaatcttactgatgcttcaatctttttgaccatcaattctgatggtcctcacgatagatgggttcctgacagttgggttcctagcagttctagcaatttgctcaagatttttgatcacctccctcatattagaaggctcgcaattaagtcgcactttttaaagtatttgtctctgggcgccttgccagaaaagctcactaaaccatgtcaacatctgaaggctctttctatagacatatgctgcgatgatccggatgcaattccaactgctctatgcattctgagaagctcccctgctctacaagaactagaaattgagattgattggagagagaaactcgaaaggaaacactccgttatcgaagaagtggagtcttcttgtgtagatgtgagctacaattgcacactttctcaactgcgacttgtgaaaataactgagatctctggtgttaaagctgaactagatttcatcagatttctccttttaagttcacctcttcttgagagaatgactatcacgcctcctcgatttcctgagcctgctactgtggatggttttctaaaactagtaaaagagctactccagtttaaacgtgaatcaaagcatgcagagattatcctcctggacccataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

438

Amino Acids

50.01

Weight (kDa)

5.65

Isoelectric Point (pI)

49.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 39
AccB1I GGYRCC 1 cut(s) 860
AccB7I CCANNNNNTGG 1 cut(s) 105
AccII CGCG 1 cut(s) 77
AccIII TCCGGA 1 cut(s) 934
AciI CCGC 2 cut(s) 65, 77
AclWI GGATC 1 cut(s) 926
AcoI YGGCCR 1 cut(s) 120
AcsI RAATTY 2 cut(s) 140, 544
AcuI CTGAAG 1 cut(s) 920
AcyI GRCGYC 2 cut(s) 36, 861
AfaI GTAC 3 cut(s) 113, 289, 679
AfiI CCNNNNNNNGG 1 cut(s) 105
AgsI TTSAA 8 cut(s) 131, 277, 478, 487, 496, 506, 542, 702
AhlI ACTAGT 1 cut(s) 1249
AjiI CACGTC 1 cut(s) 523
AjnI CCWGG 1 cut(s) 1305
AluBI AGCT 6 cut(s) 280, 877, 972, 1077, 1139, 1261
AluI AGCT 6 cut(s) 280, 877, 972, 1077, 1139, 1261
Alw21I GWGCWC 1 cut(s) 246
Alw26I GTCTC 1 cut(s) 858
AlwI GGATC 1 cut(s) 926
Aor13HI TCCGGA 1 cut(s) 934
AoxI GGCC 2 cut(s) 120, 525
ApeKI GCWGC 1 cut(s) 924
ApoI RAATTY 2 cut(s) 140, 544
AseI ATTAAT 1 cut(s) 369
AspLEI GCGC 1 cut(s) 863
AspS9I GGNCC 3 cut(s) 526, 728, 1309
AsuHPI GGTGA 4 cut(s) 91, 592, 791, 1167
AvaII GGWCC 2 cut(s) 728, 1309
BanI GGYRCC 1 cut(s) 860
BbsI GAAGAC 3 cut(s) 387, 494, 1050
Bbv12I GWGCWC 1 cut(s) 246
BbvI GCAGC 1 cut(s) 911
BccI CCATC 5 cut(s) 318, 719, 722, 735, 1229
BcgI CGANNNNNNTGC 2 cut(s) 813, 847
BciT130I CCWGG 1 cut(s) 1307
BclI TGATCA 2 cut(s) 235, 796
BcoDI GTCTC 1 cut(s) 858
BcuI ACTAGT 1 cut(s) 1249
BfaI CTAG 6 cut(s) 137, 765, 774, 992, 1145, 1250
BfmI CTRYAG 1 cut(s) 912
BfoI RGCGCY 1 cut(s) 864
BglII AGATCT 2 cut(s) 133, 1122
BisI GCNGC 2 cut(s) 65, 925
BlsI GCNGC 2 cut(s) 66, 926
Bme1390I CCNGG 1 cut(s) 1307
Bme18I GGWCC 2 cut(s) 728, 1309
BmgBI CACGTC 1 cut(s) 523
BmgT120I GGNCC 3 cut(s) 526, 728, 1309
BmiI GGNNCC 4 cut(s) 747, 762, 862, 1311
BmrFI CCNGG 1 cut(s) 1307
BmrI ACTGGG 1 cut(s) 166
BmsI GCATC 2 cut(s) 685, 928
BmuI ACTGGG 1 cut(s) 166
BpiI GAAGAC 3 cut(s) 387, 494, 1050
BplI GAGNNNNNCTC 2 cut(s) 1005, 1037
BpmI CTGGAG 1 cut(s) 1250
Bpu10I CCTNAGC 1 cut(s) 1218
BpuEI CTTGAG 3 cut(s) 590, 770, 1205
Bsa29I ATCGAT 1 cut(s) 322
BsaBI GATNNNNATC 2 cut(s) 201, 318
BsaHI GRCGYC 2 cut(s) 36, 861
BsaWI WCCGGW 1 cut(s) 934
Bsc4I CCNNNNNNNGG 1 cut(s) 105
Bse1I ACTGG 2 cut(s) 161, 1267
Bse3DI GCAATG 1 cut(s) 581
Bse8I GATNNNNATC 2 cut(s) 201, 318
BseAI TCCGGA 1 cut(s) 934
BseBI CCWGG 1 cut(s) 1307
BseCI ATCGAT 1 cut(s) 322
BseGI GGATG 3 cut(s) 301, 943, 1240
BseJI GATNNNNATC 2 cut(s) 201, 318
BseLI CCNNNNNNNGG 1 cut(s) 105
BseMI GCAATG 1 cut(s) 581
BseMII CTCAG 3 cut(s) 956, 1110, 1209
BseNI ACTGG 2 cut(s) 161, 1267
BseRI GAGGAG 1 cut(s) 1197
BseXI GCAGC 1 cut(s) 911
Bsh1236I CGCG 1 cut(s) 77
BshFI GGCC 2 cut(s) 122, 527
BshNI GGYRCC 1 cut(s) 860
BshVI ATCGAT 1 cut(s) 322
BsiHKAI GWGCWC 1 cut(s) 246
BsiSI CCGG 1 cut(s) 935
BslFI GGGAC 2 cut(s) 86, 245
BslI CCNNNNNNNGG 1 cut(s) 105
BsmAI GTCTC 1 cut(s) 858
BsmFI GGGAC 2 cut(s) 86, 245
BsmI GAATGC 1 cut(s) 960
BsnI GGCC 2 cut(s) 122, 527
Bsp1286I GDGCHC 1 cut(s) 246
Bsp13I TCCGGA 1 cut(s) 934
Bsp143I GATC 6 cut(s) 133, 235, 319, 796, 931, 1122
BspACI CCGC 2 cut(s) 65, 77
BspANI GGCC 2 cut(s) 122, 527
BspCNI CTCAG 3 cut(s) 957, 1111, 1210
BspDI ATCGAT 1 cut(s) 322
BspEI TCCGGA 1 cut(s) 934
BspFNI CGCG 1 cut(s) 77
BspLI GGNNCC 4 cut(s) 747, 762, 862, 1311
BspPI GGATC 1 cut(s) 926
BspT107I GGYRCC 1 cut(s) 860
BsrDI GCAATG 1 cut(s) 581
BsrI ACTGG 2 cut(s) 161, 1267
BssMI GATC 6 cut(s) 133, 235, 319, 796, 931, 1122
BssNI GRCGYC 2 cut(s) 36, 861
Bst2UI CCWGG 1 cut(s) 1307
Bst4CI ACNGT 3 cut(s) 386, 755, 1231
Bst6I CTCTTC 2 cut(s) 491, 1185
BstACI GRCGYC 2 cut(s) 36, 861
BstC8I GCNNGC 3 cut(s) 822, 1224, 1290
BstDEI CTNAG 4 cut(s) 247, 965, 1119, 1218
BstF5I GGATG 3 cut(s) 301, 943, 1240
BstFNI CGCG 1 cut(s) 77
BstH2I RGCGCY 1 cut(s) 864
BstHHI GCGC 1 cut(s) 863
BstKTI GATC 6 cut(s) 136, 238, 322, 799, 934, 1125
BstMAI GTCTC 1 cut(s) 858
BstMBI GATC 6 cut(s) 133, 235, 319, 796, 931, 1122
BstMWI GCNNNNNNNGC 3 cut(s) 774, 874, 1083
BstNI CCWGG 1 cut(s) 1307
BstNSI RCATGY 1 cut(s) 1292
BstSCI CCNGG 1 cut(s) 1305
BstSFI CTRYAG 1 cut(s) 912
BstUI CGCG 1 cut(s) 77
BstV1I GCAGC 1 cut(s) 911
BstV2I GAAGAC 3 cut(s) 387, 494, 1050
BstX2I RGATCY 2 cut(s) 133, 1122
BstYI RGATCY 2 cut(s) 133, 1122
Bsu15I ATCGAT 1 cut(s) 322
BsuRI GGCC 2 cut(s) 122, 527
BsuTUI ATCGAT 1 cut(s) 322
BtgZI GCGATG 1 cut(s) 942
BtrI CACGTC 1 cut(s) 523
BtsCI GGATG 3 cut(s) 301, 943, 1240
BtsIMutI CAGTG 1 cut(s) 391
Cac8I GCNNGC 3 cut(s) 822, 1224, 1290
CfoI GCGC 1 cut(s) 863
Cfr13I GGNCC 3 cut(s) 526, 728, 1309
ClaI ATCGAT 1 cut(s) 322
CseI GACGC 2 cut(s) 83, 626
Csp6I GTAC 3 cut(s) 112, 288, 678
CviAII CATG 6 cut(s) 124, 229, 239, 417, 888, 1289
CviQI GTAC 3 cut(s) 112, 288, 678
DdeI CTNAG 4 cut(s) 247, 965, 1119, 1218
DinI GGCGCC 1 cut(s) 862
DpnI GATC 6 cut(s) 135, 237, 321, 798, 933, 1124
DpnII GATC 6 cut(s) 133, 235, 319, 796, 931, 1122
DraI TTTAAA 2 cut(s) 843, 1273
EaeI YGGCCR 1 cut(s) 120
Eam1104I CTCTTC 2 cut(s) 491, 1185
EarI CTCTTC 2 cut(s) 491, 1185
Eco47I GGWCC 2 cut(s) 728, 1309
Eco57I CTGAAG 1 cut(s) 920
EcoRII CCWGG 1 cut(s) 1305
EcoT22I ATGCAT 1 cut(s) 962
EgeI GGCGCC 1 cut(s) 862
EheI GGCGCC 1 cut(s) 862
FaeI CATG 6 cut(s) 127, 232, 242, 420, 891, 1292
FalI AAGNNNNNCTT 2 cut(s) 821, 853
FaqI GGGAC 2 cut(s) 86, 245
FatI CATG 6 cut(s) 123, 228, 238, 416, 887, 1288
FauNDI CATATG 1 cut(s) 920
FbaI TGATCA 2 cut(s) 235, 796
Fnu4HI GCNGC 2 cut(s) 65, 925
FokI GGATG 3 cut(s) 308, 950, 1247
Fsp4HI GCNGC 2 cut(s) 65, 925
FspBI CTAG 6 cut(s) 137, 765, 774, 992, 1145, 1250
GlaI GCGC 1 cut(s) 862
GluI GCNGC 2 cut(s) 65, 925
GsuI CTGGAG 1 cut(s) 1250
HaeII RGCGCY 1 cut(s) 864
HaeIII GGCC 2 cut(s) 122, 527
HapII CCGG 1 cut(s) 935
HgaI GACGC 2 cut(s) 83, 626
HhaI GCGC 1 cut(s) 863
Hin1I GRCGYC 2 cut(s) 36, 861
Hin1II CATG 6 cut(s) 127, 232, 242, 420, 891, 1292
Hin6I GCGC 1 cut(s) 861
HinP1I GCGC 1 cut(s) 861
HincII GTYRAC 4 cut(s) 471, 520, 667, 893
HindII GTYRAC 4 cut(s) 471, 520, 667, 893
HinfI GANTC 4 cut(s) 499, 550, 1055, 1280
HpaII CCGG 1 cut(s) 935
HphI GGTGA 4 cut(s) 91, 592, 791, 1167
Hpy166II GTNNAC 9 cut(s) 26, 226, 433, 455, 471, 520, 667, 893, 1175
Hpy188I TCNGA 4 cut(s) 724, 900, 966, 1157
Hpy8I GTNNAC 9 cut(s) 26, 226, 433, 455, 471, 520, 667, 893, 1175
HpyAV CCTTC 2 cut(s) 810, 895
HpyCH4III ACNGT 3 cut(s) 386, 755, 1231
HpyCH4IV ACGT 4 cut(s) 36, 513, 522, 1276
HpyCH4V TGCA 5 cut(s) 558, 941, 960, 1086, 1292
HpyF10VI GCNNNNNNNGC 3 cut(s) 774, 874, 1083
HpyF3I CTNAG 4 cut(s) 247, 965, 1119, 1218
HpySE526I ACGT 4 cut(s) 36, 513, 522, 1276
Hsp92I GRCGYC 2 cut(s) 36, 861
Hsp92II CATG 6 cut(s) 127, 232, 242, 420, 891, 1292
HspAI GCGC 1 cut(s) 861
KasI GGCGCC 1 cut(s) 860
Kpn2I TCCGGA 1 cut(s) 934
Ksp22I TGATCA 2 cut(s) 235, 796
Kzo9I GATC 6 cut(s) 133, 235, 319, 796, 931, 1122
LmnI GCTCC 1 cut(s) 977
Lsp1109I GCAGC 1 cut(s) 911
LweI GCATC 2 cut(s) 685, 928
MaeI CTAG 6 cut(s) 137, 765, 774, 992, 1145, 1250
MaeII ACGT 4 cut(s) 36, 513, 522, 1276
MaeIII GTNAC 4 cut(s) 37, 152, 441, 598
MalI GATC 6 cut(s) 135, 237, 321, 798, 933, 1124
MboI GATC 6 cut(s) 133, 235, 319, 796, 931, 1122
MboII GAAGA 6 cut(s) 392, 494, 508, 1050, 1058, 1172
MfeI CAATTG 2 cut(s) 446, 1081
MflI RGATCY 2 cut(s) 133, 1122
MhlI GDGCHC 1 cut(s) 246
Mly113I GGCGCC 1 cut(s) 861
MlyI GAGTC 2 cut(s) 508, 1064
MmeI TCCRAC 1 cut(s) 971
Mph1103I ATGCAT 1 cut(s) 962
MroI TCCGGA 1 cut(s) 934
MseI TTAA 8 cut(s) 369, 578, 672, 828, 842, 1134, 1169, 1272
MslI CAYNNNNRTG 1 cut(s) 594
MspI CCGG 1 cut(s) 935
MspR9I CCNGG 1 cut(s) 1307
MssI GTTTAAAC 1 cut(s) 1273
MunI CAATTG 2 cut(s) 446, 1081
Mva1269I GAATGC 1 cut(s) 960
MvaI CCWGG 1 cut(s) 1307
MvnI CGCG 1 cut(s) 77
MwoI GCNNNNNNNGC 3 cut(s) 774, 874, 1083
NarI GGCGCC 1 cut(s) 861
NdeI CATATG 1 cut(s) 920
NdeII GATC 6 cut(s) 133, 235, 319, 796, 931, 1122
NlaIII CATG 6 cut(s) 127, 232, 242, 420, 891, 1292
NlaIV GGNNCC 4 cut(s) 747, 762, 862, 1311
NmuCI GTSAC 3 cut(s) 37, 152, 598
NsiI ATGCAT 1 cut(s) 962
NspI RCATGY 1 cut(s) 1292
PaeI GCATGC 1 cut(s) 1292
PcsI WCGNNNNNNNCGW 1 cut(s) 519
PctI GAATGC 1 cut(s) 960
PfeI GAWTC 2 cut(s) 550, 1280
PflMI CCANNNNNTGG 1 cut(s) 105
PfoI TCCNGGA 1 cut(s) 1305
PkrI GCNGC 2 cut(s) 66, 926
PleI GAGTC 2 cut(s) 507, 1063
PluTI GGCGCC 1 cut(s) 864
PmeI GTTTAAAC 1 cut(s) 1273
PpsI GAGTC 2 cut(s) 507, 1063
PshBI ATTAAT 1 cut(s) 369
Psp6I CCWGG 1 cut(s) 1305
PspGI CCWGG 1 cut(s) 1305
PspN4I GGNNCC 4 cut(s) 747, 762, 862, 1311
PspPI GGNCC 3 cut(s) 526, 728, 1309
PsuI RGATCY 2 cut(s) 133, 1122
RsaI GTAC 3 cut(s) 113, 289, 679
RsaNI GTAC 3 cut(s) 112, 288, 678
RseI CAYNNNNRTG 1 cut(s) 594
SaqAI TTAA 8 cut(s) 369, 578, 672, 828, 842, 1134, 1169, 1272
SatI GCNGC 2 cut(s) 65, 925
Sau3AI GATC 6 cut(s) 133, 235, 319, 796, 931, 1122
Sau96I GGNCC 3 cut(s) 526, 728, 1309
SchI GAGTC 2 cut(s) 508, 1064
ScrFI CCNGG 1 cut(s) 1307
SduI GDGCHC 1 cut(s) 246
SfaNI GCATC 2 cut(s) 685, 928
SfcI CTRYAG 1 cut(s) 912
SfoI GGCGCC 1 cut(s) 862
SinI GGWCC 2 cut(s) 728, 1309
SmiMI CAYNNNNRTG 1 cut(s) 594
SmlI CTYRAG 3 cut(s) 569, 785, 1184
SmoI CTYRAG 3 cut(s) 569, 785, 1184
SpeI ACTAGT 1 cut(s) 1249
SphI GCATGC 1 cut(s) 1292
SsiI CCGC 2 cut(s) 65, 77
SspDI GGCGCC 1 cut(s) 860
SspMI CTAG 6 cut(s) 137, 765, 774, 992, 1145, 1250
StyD4I CCNGG 1 cut(s) 1305
TaaI ACNGT 3 cut(s) 386, 755, 1231
TaiI ACGT 4 cut(s) 39, 516, 525, 1279
TaqI TCGA 5 cut(s) 322, 421, 1023, 1044, 1210
TatI WGTACW 1 cut(s) 287
TauI GCSGC 1 cut(s) 67
TfiI GAWTC 2 cut(s) 550, 1280
Tru1I TTAA 8 cut(s) 369, 578, 672, 828, 842, 1134, 1169, 1272
Tru9I TTAA 8 cut(s) 369, 578, 672, 828, 842, 1134, 1169, 1272
TscAI CASTG 1 cut(s) 391
TseFI GTSAC 3 cut(s) 37, 152, 598
TseI GCWGC 1 cut(s) 924
Tsp45I GTSAC 3 cut(s) 37, 152, 598
TspDTI ATGAA 3 cut(s) 242, 405, 1141
TspGWI ACGGA 2 cut(s) 456, 1027
TspRI CASTG 1 cut(s) 391
Van91I CCANNNNNTGG 1 cut(s) 105
VpaK11BI GGWCC 2 cut(s) 728, 1309
VspI ATTAAT 1 cut(s) 369
XapI RAATTY 2 cut(s) 140, 544
XbaI TCTAGA 1 cut(s) 136
XceI RCATGY 1 cut(s) 1292
XspI CTAG 6 cut(s) 137, 765, 774, 992, 1145, 1250
ZraI GACGTC 1 cut(s) 37
Zsp2I ATGCAT 1 cut(s) 962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.