RLG00000011741

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000103
Physical Location & Seq
Reverse (-)
12345739 .. 12349936
4198 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011741

Sequence Viewer

Length: 2562 bp
ATGGAGGAAAGTAAAAGACCCAAGTCGTGTGCGAATGTGAAGATGGAGTTGGATAGGATTAGCAACTTACCAAGTGATGTTATAGATAAAATACTGTCACGTTTGACGCTTAAGGACGCAGCGAGGACTTGTGTTTTGTCCACCAAGTGGAGATACAAATTGGTCATGCTTCCACATCTTGTGTTTGATTCTGATTGCACCTCGAGCATTATTGATCATGTTCTCTTAACTCACATTGGCCCCATCAGCAAATTTAAGCTTAGTCTCAGATGTAAAGACATCAGAGATATTGATCGCTGGATTCTTCACCTGTCGAGATACTCTCTCAAAGTGTTTATGCTTCATAACCAAGTGTGGCTACCCCAGCCTCAGCCGCGCTACAAGATGCCTTTATGCATGTTTTCATGTCAAGATATCATTCATTTAAAGTTGTCTAATTGTTTGCTAAAACCCCCCTCAACATTCAAAGGTTTCAGGAGTTTGAAGAGCCTTAAAATTGAGCAAGTTACGCTGGCGCAACATGTGTTGGAAAATATGATTCGTTGTTGCCCTCTGCTTGAGAGATTCACTTTGGATGACTGTAATGGTTTCAGCCAACTCAAGATCGAAGGGATTGATGCACCGAAGCTCCAATTCCTTTACATCTACGGTTCGTTTGGGGATTTTAGTGTTGTGAATACATTTAACCTTGCTGATGTTTCTATTGGTTTTGACAAATCACGGGTCCCTTGGAGTTCCAGCAAATTGATCAAGTTCTTTGATGACATGCCTTGTATTCAAAAGCTCCGAATTAACTGCGACTTTTTGACGTACTTGGCTGCTGGTGCCTTGCTAGAAAGGCTGCCCAAACCATGTCTGCATCTGAAATTTCTTGGCATGAACATACGCTTCGATGATCGGGAGGATATTTTAACTGCGCTTTGCCTTCTGAGAAGCTCCCCTGCTCTAGAAAAACTAGAACTCTATACAAGTGATTTCTTAGCTAATGAAGCTAATGAAGGTACAGTTAGCTCTTGTTTGGATGACTACCAGAGTTGCTCATTCACCCAACTGCGACATGTGAAAATATACACCATCTCTGGTCTTGAAGCTCAACTAGATTTTATTCAATTTCTTCTTTTGTGTTCACCTGTGCTTGAGACGTTGACCGTTAATGTTGAGGCAGTGGATCTTGATGCGGGTGAATCTTTGGAGCTAGTGAAGAAGTTGCTTCGTTTGAGGCGGGCTTCAGGGAATGTGGAGATGATCTATTTAGACGATTTATCAATACGGAATCTTTCTCTCAAGTTTCTGAACAAAAGTGAAGTGATTGAAGGATCTTCCGAGTCCTGTTTGAATATGGAGGTGGACTTGGATAGAATCAGCAGCTTACCGAATGAGGTTATAGACAAAATATTGTCAAGTTTGCCATTGGAGGACGGAGCGAGGACGAATATTTTGTCAAGCAAGTGGAGGTACAAATTCGCTATGCTTCCACGTCTGGTGTTTGATCATCAATGCACCTCCAAGATTGTTGATCATGTACTCTTAACTCACATTGGCCCGATAAGCAAGTTTAAGCTTAGTCAAGGATCCAAAGACATCAAAGATATTGATCGGTGGATTCTTCACCTGTCAAGACACCCTATCAATGAGTTGATACTTAACTGTTCTGTAAGGCTGCGCTACAAGATGCCTTCATGTATGTTTTCATGTCAAGATTTGAGTCATTTGAATTTGAATAATTGTTTGCTAAAACCCCCTTCAGCATTCAAAGGCTTCAGGAGTTTGCAAACGCTTATCATTAAGGGTGTTACGCTGGCCCAAGATGTGTTGGAAAATATGATTATTTGTTCTCCTCTGCTTGAGAGGTTGACTTTGAACAGCTGTGACGGTTTCAGACAACTCAAGATTGATGCACCCAATCTTCAATTCCTTCTCTGTATTGGTGTTTTTGAAGATTTAAGTATTGTGAATACTTTGAAACTTGCTGTTGTTCACATTTATTTAGTAAACCGACCAGTTCGTCATAGTTCTAGAAATTTGCTCAAGTTTTTTGTCGACCTGCCTCAGGTTCAGAGTCTCCATATTAATTGGTTCTGTTTGAATTATATGGCTGCTAGTCCTTTGCTAGAAAAGCTGCCTAAACCATGTCTACATTTGAAGGTTCTTGACATAGAGATGTCCTTTGATGAGGTTGGGGAGGTTTCAACTGCTCTTTGCCTTCTGAGAAGCTCCCCTGCTCTAGAAACACTAAATATCAACGCTGTGAAGTGCCAAGATCAAGCTGATGTGGGAGCAGTGAACTCTTGGCTGGATAACAACCGGAGTTGTTCATTCACCCAACTGCGACATGTGAAAATACAGCGCATATCTGGCGTTGAAGCTGAACTGGATTTTATCAGATTTCTGCTTATAAGTTCATCGGTACATGAGACAATGACTGTTGTGCGTGCGGAGCCTGATGCTGCTGATGAAAATCCAGATCTAGTTGTTCTCCAAAATTCTTTGGATGTAGTTAAAAAGTTGCTCCGGTTCAGGCGTGCCTCACCGAATCTAGAGATAATATATTTAGACCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

854

Amino Acids

97.14

Weight (kDa)

7.83

Isoelectric Point (pI)

48.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 52 1.3e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 85 - 387 1e-13 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 97 - 320 8e-15 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 525 - 784 1.6e-14 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 531 - 747 1.5e-18 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2396
AasI GACNNNNNNGTC 1 cut(s) 2004
Acc36I ACCTGC 1 cut(s) 2052
AccB1I GGYRCC 1 cut(s) 824
AccB7I CCANNNNNTGG 1 cut(s) 147
AccI GTMKAC 2 cut(s) 2040, 2134
AccII CGCG 1 cut(s) 376
AciI CCGC 4 cut(s) 374, 1178, 1222, 2435
AclWI GGATC 4 cut(s) 1176, 1324, 1566, 1579
AcsI RAATTY 6 cut(s) 251, 866, 1460, 1714, 2020, 2482
AcuI CTGAAG 3 cut(s) 1212, 1728, 1744
AdeI CACNNNGTG 1 cut(s) 147
AfaI GTAC 5 cut(s) 812, 1003, 1457, 1524, 2409
AfiI CCNNNNNNNGG 2 cut(s) 147, 2050
AflII CTTAAG 1 cut(s) 110
AflIII ACRYGT 3 cut(s) 520, 1057, 2332
AjiI CACGTC 1 cut(s) 1478
AjuI GAANNNNNNNTTGG 4 cut(s) 32, 64, 1895, 1927
Alw26I GTCTC 4 cut(s) 269, 1133, 2066, 2408
AlwI GGATC 4 cut(s) 1176, 1324, 1566, 1579
Ama87I CYCGRG 1 cut(s) 202
AoxI GGCC 3 cut(s) 238, 1540, 1800
ApeKI GCWGC 8 cut(s) 119, 818, 841, 1365, 1660, 2096, 2119, 2447
ApoI RAATTY 6 cut(s) 251, 866, 1460, 1714, 2020, 2482
ArsI GACNNNNNNTTYG 8 cut(s) 118, 150, 708, 740, 1420, 1424, 1452, 1456
AseI ATTAAT 1 cut(s) 2070
AspLEI GCGC 5 cut(s) 378, 517, 919, 1665, 2349
AspS9I GGNCC 4 cut(s) 239, 724, 1541, 1801
AsuHPI GGTGA 7 cut(s) 299, 1036, 1119, 1193, 1601, 2311, 2520
AvaI CYCGRG 1 cut(s) 202
AvaII GGWCC 1 cut(s) 724
AxyI CCTNAGG 1 cut(s) 2049
BamHI GGATCC 1 cut(s) 1571
BanI GGYRCC 1 cut(s) 824
BbvCI CCTCAGC 1 cut(s) 369
BbvI GCAGC 8 cut(s) 131, 805, 828, 1377, 1647, 2083, 2106, 2434
BccI CCATC 3 cut(s) 37, 251, 1082
BcgI CGANNNNNNTGC 2 cut(s) 777, 811
BclI TGATCA 4 cut(s) 214, 747, 1489, 1516
BcoDI GTCTC 4 cut(s) 269, 1133, 2066, 2408
BfrI CTTAAG 1 cut(s) 110
BfuAI ACCTGC 1 cut(s) 2052
BglII AGATCT 1 cut(s) 2464
BisI GCNGC 9 cut(s) 120, 374, 819, 842, 1366, 1661, 2097, 2120, 2448
BlsI GCNGC 9 cut(s) 121, 375, 820, 843, 1367, 1662, 2098, 2121, 2449
Bme18I GGWCC 1 cut(s) 724
BmeT110I CYCGRG 1 cut(s) 202
BmgBI CACGTC 1 cut(s) 1478
BmgT120I GGNCC 4 cut(s) 239, 724, 1541, 1801
BmiI GGNNCC 6 cut(s) 241, 725, 726, 826, 1573, 2439
BmsI GCATC 7 cut(s) 375, 607, 868, 1165, 1662, 1885, 2434
BoxI GACNNNNGTC 1 cut(s) 22
BplI GAGNNNNNCTC 2 cut(s) 307, 339
Bpu10I CCTNAGC 1 cut(s) 369
BpuEI CTTGAG 7 cut(s) 578, 584, 1157, 1268, 1865, 1871, 2012
BsaBI GATNNNNATC 3 cut(s) 291, 1593, 2457
BsaJI CCNNGG 1 cut(s) 728
BsaWI WCCGGW 2 cut(s) 2304, 2511
BsaXI ACNNNNNCTCC 2 cut(s) 612, 642
Bsc4I CCNNNNNNNGG 2 cut(s) 147, 2050
Bse1I ACTGG 2 cut(s) 2000, 2376
Bse21I CCTNAGG 1 cut(s) 2049
Bse8I GATNNNNATC 3 cut(s) 291, 1593, 2457
BseDI CCNNGG 1 cut(s) 728
BseGI GGATG 3 cut(s) 580, 1027, 2497
BseJI GATNNNNATC 3 cut(s) 291, 1593, 2457
BseLI CCNNNNNNNGG 2 cut(s) 147, 2050
BseMII CTCAG 5 cut(s) 280, 383, 920, 2063, 2198
BseNI ACTGG 2 cut(s) 2000, 2376
BseRI GAGGAG 1 cut(s) 1827
BseXI GCAGC 8 cut(s) 131, 805, 828, 1377, 1647, 2083, 2106, 2434
BseYI CCCAGC 1 cut(s) 363
Bsh1236I CGCG 1 cut(s) 376
BshFI GGCC 3 cut(s) 240, 1542, 1802
BshNI GGYRCC 1 cut(s) 824
BsiHKCI CYCGRG 1 cut(s) 202
BsiSI CCGG 2 cut(s) 2305, 2512
BslFI GGGAC 1 cut(s) 710
BslI CCNNNNNNNGG 2 cut(s) 147, 2050
BsmAI GTCTC 4 cut(s) 269, 1133, 2066, 2408
BsmBI CGTCTC 1 cut(s) 1133
BsmFI GGGAC 1 cut(s) 710
BsmI GAATGC 1 cut(s) 1748
BsnI GGCC 3 cut(s) 240, 1542, 1802
BsoBI CYCGRG 1 cut(s) 202
BspACI CCGC 4 cut(s) 374, 1178, 1222, 2435
BspANI GGCC 3 cut(s) 240, 1542, 1802
BspCNI CTCAG 5 cut(s) 279, 382, 921, 2062, 2199
BspFNI CGCG 1 cut(s) 376
BspLI GGNNCC 6 cut(s) 241, 725, 726, 826, 1573, 2439
BspMI ACCTGC 1 cut(s) 2052
BspPI GGATC 4 cut(s) 1176, 1324, 1566, 1579
BspQI GCTCTTC 1 cut(s) 479
BspT107I GGYRCC 1 cut(s) 824
BspTI CTTAAG 1 cut(s) 110
BsrI ACTGG 2 cut(s) 2000, 2376
BssECI CCNNGG 1 cut(s) 728
BssT1I CCWWGG 1 cut(s) 728
Bst4CI ACNGT 8 cut(s) 96, 581, 650, 1006, 1150, 1649, 1874, 2425
Bst6I CTCTTC 1 cut(s) 479
BstAFI CTTAAG 1 cut(s) 110
BstC8I GCNNGC 5 cut(s) 513, 1224, 1800, 2433, 2523
BstDEI CTNAG 8 cut(s) 260, 266, 369, 929, 979, 1562, 2049, 2207
BstENI CCTNNNNNAGG 1 cut(s) 2048
BstF5I GGATG 3 cut(s) 580, 1027, 2497
BstFNI CGCG 1 cut(s) 376
BstHHI GCGC 5 cut(s) 378, 517, 919, 1665, 2349
BstMAI GTCTC 4 cut(s) 269, 1133, 2066, 2408
BstNSI RCATGY 5 cut(s) 400, 524, 769, 1061, 2336
BstPAI GACNNNNGTC 1 cut(s) 22
BstUI CGCG 1 cut(s) 376
BstV1I GCAGC 8 cut(s) 131, 805, 828, 1377, 1647, 2083, 2106, 2434
BstX2I RGATCY 4 cut(s) 1168, 1316, 1571, 2464
BstYI RGATCY 4 cut(s) 1168, 1316, 1571, 2464
Bsu36I CCTNAGG 1 cut(s) 2049
BsuRI GGCC 3 cut(s) 240, 1542, 1802
BtrI CACGTC 1 cut(s) 1478
BtsCI GGATG 3 cut(s) 580, 1027, 2497
BtsI GCAGTG 2 cut(s) 1170, 2286
BtsIMutI CAGTG 2 cut(s) 1170, 2286
BveI ACCTGC 1 cut(s) 2052
Cac8I GCNNGC 5 cut(s) 513, 1224, 1800, 2433, 2523
CfoI GCGC 5 cut(s) 378, 517, 919, 1665, 2349
Cfr13I GGNCC 4 cut(s) 239, 724, 1541, 1801
CseI GACGC 2 cut(s) 115, 125
Csp6I GTAC 5 cut(s) 811, 1002, 1456, 1523, 2408
CviQI GTAC 5 cut(s) 811, 1002, 1456, 1523, 2408
DdeI CTNAG 8 cut(s) 260, 266, 369, 929, 979, 1562, 2049, 2207
DraI TTTAAA 1 cut(s) 426
DraIII CACNNNGTG 1 cut(s) 147
DrdI GACNNNNNNGTC 1 cut(s) 2004
DseDI GACNNNNNNGTC 1 cut(s) 2004
Eam1104I CTCTTC 1 cut(s) 479
EarI CTCTTC 1 cut(s) 479
Eco130I CCWWGG 1 cut(s) 728
Eco32I GATATC 1 cut(s) 415
Eco47I GGWCC 1 cut(s) 724
Eco57I CTGAAG 3 cut(s) 1212, 1728, 1744
Eco81I CCTNAGG 1 cut(s) 2049
Eco88I CYCGRG 1 cut(s) 202
EcoNI CCTNNNNNAGG 1 cut(s) 2048
EcoO109I RGGNCCY 1 cut(s) 724
EcoRV GATATC 1 cut(s) 415
EcoT14I CCWWGG 1 cut(s) 728
EcoT22I ATGCAT 1 cut(s) 398
ErhI CCWWGG 1 cut(s) 728
Esp3I CGTCTC 1 cut(s) 1133
FaqI GGGAC 1 cut(s) 710
FauI CCCGC 2 cut(s) 1171, 1215
FbaI TGATCA 4 cut(s) 214, 747, 1489, 1516
FblI GTMKAC 2 cut(s) 2040, 2134
Fnu4HI GCNGC 9 cut(s) 120, 374, 819, 842, 1366, 1661, 2097, 2120, 2448
FokI GGATG 3 cut(s) 587, 1034, 2504
Fsp4HI GCNGC 9 cut(s) 120, 374, 819, 842, 1366, 1661, 2097, 2120, 2448
GlaI GCGC 5 cut(s) 377, 516, 918, 1664, 2348
GluI GCNGC 9 cut(s) 120, 374, 819, 842, 1366, 1661, 2097, 2120, 2448
GsaI CCCAGC 1 cut(s) 367
HaeIII GGCC 3 cut(s) 240, 1542, 1802
HapII CCGG 2 cut(s) 2305, 2512
HgaI GACGC 2 cut(s) 115, 125
HhaI GCGC 5 cut(s) 378, 517, 919, 1665, 2349
Hin6I GCGC 5 cut(s) 376, 515, 917, 1663, 2347
HinP1I GCGC 5 cut(s) 376, 515, 917, 1663, 2347
HincII GTYRAC 3 cut(s) 1146, 1854, 2041
HindII GTYRAC 3 cut(s) 1146, 1854, 2041
HindIII AAGCTT 2 cut(s) 257, 1559
HpaII CCGG 2 cut(s) 2305, 2512
HphI GGTGA 7 cut(s) 299, 1036, 1119, 1193, 1601, 2311, 2520
HpyAV CCTTC 9 cut(s) 602, 935, 992, 1307, 1686, 1752, 1925, 2137, 2213
HpyCH4III ACNGT 8 cut(s) 96, 581, 650, 1006, 1150, 1649, 1874, 2425
HpyCH4IV ACGT 4 cut(s) 100, 809, 1142, 1477
HpyCH4V TGCA 7 cut(s) 198, 396, 620, 859, 1500, 1771, 1898
HpyF3I CTNAG 8 cut(s) 260, 266, 369, 929, 979, 1562, 2049, 2207
HpySE526I ACGT 4 cut(s) 100, 809, 1142, 1477
HspAI GCGC 5 cut(s) 376, 515, 917, 1663, 2347
KflI GGGWCCC 1 cut(s) 724
Ksp22I TGATCA 4 cut(s) 214, 747, 1489, 1516
LguI GCTCTTC 1 cut(s) 479
LmnI GCTCC 9 cut(s) 633, 789, 941, 1192, 1421, 2219, 2276, 2437, 2514
Lsp1109I GCAGC 8 cut(s) 131, 805, 828, 1377, 1647, 2083, 2106, 2434
LweI GCATC 7 cut(s) 375, 607, 868, 1165, 1662, 1885, 2434
MaeII ACGT 4 cut(s) 100, 809, 1142, 1477
MaeIII GTNAC 4 cut(s) 96, 505, 1792, 1868
MboII GAAGA 9 cut(s) 52, 296, 496, 1106, 1213, 1311, 1598, 1898, 1949
MflI RGATCY 4 cut(s) 1168, 1316, 1571, 2464
MlyI GAGTC 3 cut(s) 1334, 1714, 2068
MmeI TCCRAC 3 cut(s) 30, 507, 1794
Mph1103I ATGCAT 1 cut(s) 398
MslI CAYNNNNRTG 1 cut(s) 2159
MspA1I CMGCKG 1 cut(s) 1866
MspCI CTTAAG 1 cut(s) 110
MspI CCGG 2 cut(s) 2305, 2512
Mva1269I GAATGC 1 cut(s) 1748
MvnI CGCG 1 cut(s) 376
NlaIV GGNNCC 6 cut(s) 241, 725, 726, 826, 1573, 2439
NmuCI GTSAC 2 cut(s) 96, 1868
NsiI ATGCAT 1 cut(s) 398
NspI RCATGY 5 cut(s) 400, 524, 769, 1061, 2336
PaeR7I CTCGAG 1 cut(s) 202
PciI ACATGT 3 cut(s) 520, 1057, 2332
PciSI GCTCTTC 1 cut(s) 479
PctI GAATGC 1 cut(s) 1748
PfeI GAWTC 9 cut(s) 188, 301, 538, 564, 1184, 1273, 1359, 1603, 2533
PflMI CCANNNNNTGG 1 cut(s) 147
PkrI GCNGC 9 cut(s) 121, 375, 820, 843, 1367, 1662, 2098, 2121, 2449
PleI GAGTC 3 cut(s) 1333, 1713, 2067
PpsI GAGTC 3 cut(s) 1333, 1713, 2067
PpuMI RGGWCCY 1 cut(s) 724
PscI ACATGT 3 cut(s) 520, 1057, 2332
PshAI GACNNNNGTC 1 cut(s) 22
PshBI ATTAAT 1 cut(s) 2070
PsiI TTATAA 1 cut(s) 2396
Psp5II RGGWCCY 1 cut(s) 724
PspFI CCCAGC 1 cut(s) 363
PspN4I GGNNCC 6 cut(s) 241, 725, 726, 826, 1573, 2439
PspPI GGNCC 4 cut(s) 239, 724, 1541, 1801
PspPPI RGGWCCY 1 cut(s) 724
PspXI VCTCGAGB 1 cut(s) 202
PsuI RGATCY 4 cut(s) 1168, 1316, 1571, 2464
PvuII CAGCTG 1 cut(s) 1866
RsaI GTAC 5 cut(s) 812, 1003, 1457, 1524, 2409
RsaNI GTAC 5 cut(s) 811, 1002, 1456, 1523, 2408
RseI CAYNNNNRTG 1 cut(s) 2159
SalI GTCGAC 1 cut(s) 2039
SapI GCTCTTC 1 cut(s) 479
SatI GCNGC 9 cut(s) 120, 374, 819, 842, 1366, 1661, 2097, 2120, 2448
Sau96I GGNCC 4 cut(s) 239, 724, 1541, 1801
SchI GAGTC 3 cut(s) 1334, 1714, 2068
SfaNI GCATC 7 cut(s) 375, 607, 868, 1165, 1662, 1885, 2434
Sfr274I CTCGAG 1 cut(s) 202
SinI GGWCC 1 cut(s) 724
SlaI CTCGAG 1 cut(s) 202
SmiMI CAYNNNNRTG 1 cut(s) 2159
SmlI CTYRAG 9 cut(s) 110, 202, 557, 599, 1136, 1283, 1844, 1886, 2027
SmoI CTYRAG 9 cut(s) 110, 202, 557, 599, 1136, 1283, 1844, 1886, 2027
SsiI CCGC 4 cut(s) 374, 1178, 1222, 2435
SspI AATATT 2 cut(s) 1395, 1435
StyI CCWWGG 1 cut(s) 728
TaaI ACNGT 8 cut(s) 96, 581, 650, 1006, 1150, 1649, 1874, 2425
TaiI ACGT 4 cut(s) 103, 812, 1145, 1480
TaqI TCGA 5 cut(s) 203, 314, 606, 891, 2040
TatI WGTACW 1 cut(s) 1522
TauI GCSGC 1 cut(s) 376
TfiI GAWTC 9 cut(s) 188, 301, 538, 564, 1184, 1273, 1359, 1603, 2533
TscAI CASTG 2 cut(s) 1170, 2286
TseFI GTSAC 2 cut(s) 96, 1868
TseI GCWGC 8 cut(s) 119, 818, 841, 1365, 1660, 2096, 2119, 2447
Tsp45I GTSAC 2 cut(s) 96, 1868
TspGWI ACGGA 2 cut(s) 1285, 1434
TspRI CASTG 2 cut(s) 1170, 2286
Van91I CCANNNNNTGG 1 cut(s) 147
Vha464I CTTAAG 1 cut(s) 110
VpaK11BI GGWCC 1 cut(s) 724
VspI ATTAAT 1 cut(s) 2070
XagI CCTNNNNNAGG 1 cut(s) 2048
XapI RAATTY 6 cut(s) 251, 866, 1460, 1714, 2020, 2482
XbaI TCTAGA 4 cut(s) 946, 2015, 2224, 2536
XceI RCATGY 5 cut(s) 400, 524, 769, 1061, 2336
XhoI CTCGAG 1 cut(s) 202
XmiI GTMKAC 2 cut(s) 2040, 2134
Zsp2I ATGCAT 1 cut(s) 398
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.