Rorug05G0534000

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000103
Physical Location & Seq
Forward (+)
72183840 .. 72186793
2954 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0534000.1

Sequence Viewer

Length: 1416 bp
ATGGCGGTGGATGGAAAAGACACCCAGAAGCCACACGTAGCGGTGCTATCGAGTCCGGGCATGGGTCACGTGACCCCTCTCCTCGAGCTAGCCAAACGGCTGGTCGTCGACCTCGGCTTCCAGGTCAGCTTCCTTGCAATCACCACCGATGCACCACCCGCGCAGCTTCAGCTGCTCAACAACAACCCCACCCTCCCTTCTGATCTCCACGTCATCCACCTCCCTCATGTTGATGTGTCAAGCAACGACAGCATAGCAATTCGGATCCTTCAAATTGTCCGAGAGAGCCTTCGTTTACTGCCCTCGGTGCTAACCAACTTAAACTCACACAAACCGCCGCCAAAGGCTCTAATCGTCGATCCGTTTTGTGCCGAAGCCCTTGAGACCGCCAGCGACCACTCTATCCCAACGTATCTTTTCTTGACCGCCTCCGCTTCATTTCTGGCGTTGACCATTTACTTCCCTACGCTTCATGCAGAGGTCAAAGGAGATTATGGTAAAATCAAAGAGAGGGTTTTTCTTCCAGGTTGCATGCCCTTGTGGGTTGACGATCTTCTCCCTGATGTTCTGGTACCAGAAGTCTTGCCTCTATGCAACCGGTTCCCACTCGTCAAGGGCATTTTCGTGAACACATGGGAAGAACTCGAGCCGGTACCGCTTTGCGCATTTAAAAACCACCCTTTCTTTGTCAATCTGCCGATGCCGACGGTTCATCCCATCGGACCCCTAACCAAAGACAAAGAGGTTGACGTGGAATCGGAGTTGCTGACGTGGCTGGACAAGCAGCCGTGTGACTCGGTTGTTTACTTGTCGTTCGGCAGCGGAGGGACGCTGTCGGCGGAGCAGATGGTGGAGTTGGCTCATGGGTTGGAGCTGAGTGGAAAACGATTCCTCTGGGTGGCGAGACCTCCCGGAGCGGATGGTGCTTCGGGAAGCTTCTTCGAAGTTGGTGGTGATGTTTCCCTTACGGCGTCGTATTTGCCGGATGGGTTTCTGGAGAGGACACGAGGGGCGGGGCTGGTGACGGCGACGTGGGCCCCGCAAGTGGCGGTGTTGAGCCACCCCTCGGTGTGTGGGTTTGTGACGCACTGCGGGTGGAACTCTGTGATGGAGAGCGTGGTGCACGGGGTGGAGATGGTGGCGTGGCCGCTTTACGCGGAGCAGAAGATGAATGCGAGGGCGTTGGTGGAGATGGGAGTGGCGGTGAGGCCGGAGGCGGGAGAGGAGGGAGTTGTGGGGAGGGCGGAGGTGGAGAGGGTGGTGAGGTTGGTGGTGGAAGGCGAGGAAGGGAAGGAGATGAGGGGGAGGGTGAGAAAGATGCAGCAGAGTGCGGTGGAGGCTTTGGGTGGTGGTGGGTCATCTGGCGGGTGTCTAAGTCGCTTGGGGAAGGAGTGGAGGGATGGAAGTACAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

471

Amino Acids

50.91

Weight (kDa)

5.35

Isoelectric Point (pI)

32.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 234 - 432 1.7e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 664
Acc65I GGTACC 2 cut(s) 571, 652
AccB1I GGYRCC 2 cut(s) 571, 652
AccBSI CCGCTC 1 cut(s) 917
AccI GTMKAC 1 cut(s) 108
AccII CGCG 2 cut(s) 161, 1157
AclWI GGATC 3 cut(s) 259, 272, 353
AcoI YGGCCR 1 cut(s) 1145
AcuI CTGAAG 1 cut(s) 152
AcvI CACGTG 1 cut(s) 70
AcyI GRCGYC 1 cut(s) 971
AdeI CACNNNGTG 1 cut(s) 1129
AfaI GTAC 3 cut(s) 573, 654, 1408
AfiI CCNNNNNNNGG 5 cut(s) 62, 898, 1045, 1066, 1217
AflIII ACRYGT 1 cut(s) 34
AgeI ACCGGT 1 cut(s) 597
AgsI TTSAA 1 cut(s) 272
AjiI CACGTC 4 cut(s) 211, 751, 771, 1032
AjnI CCWGG 2 cut(s) 120, 523
AluBI AGCT 6 cut(s) 88, 129, 166, 172, 874, 936
AluI AGCT 6 cut(s) 88, 129, 166, 172, 874, 936
Alw21I GWGCWC 1 cut(s) 1125
Alw26I GTCTC 2 cut(s) 377, 898
Alw44I GTGCAC 1 cut(s) 1121
AlwI GGATC 3 cut(s) 259, 272, 353
Ama87I CYCGRG 2 cut(s) 83, 644
AoxI GGCC 3 cut(s) 1035, 1145, 1208
ApaI GGGCCC 1 cut(s) 1039
ApaLI GTGCAC 1 cut(s) 1121
ApeKI GCWGC 5 cut(s) 163, 172, 784, 819, 1321
ArsI GACNNNNNNTTYG 2 cut(s) 87, 119
AsiGI ACCGGT 1 cut(s) 597
Asp718I GGTACC 2 cut(s) 571, 652
AspLEI GCGC 2 cut(s) 163, 665
AspS9I GGNCC 3 cut(s) 722, 1035, 1036
AsuC2I CCSGG 2 cut(s) 57, 912
AsuHPI GGTGA 6 cut(s) 133, 965, 1033, 1216, 1273, 1321
AsuII TTCGAA 1 cut(s) 942
AsuNHI GCTAGC 1 cut(s) 88
AvaI CYCGRG 2 cut(s) 83, 644
AvaII GGWCC 1 cut(s) 722
BaeGI GKGCMC 2 cut(s) 1039, 1125
BamHI GGATCC 1 cut(s) 264
BanI GGYRCC 2 cut(s) 571, 652
BanII GRGCYC 1 cut(s) 1039
BauI CACGAG 1 cut(s) 1005
BbrPI CACGTG 1 cut(s) 70
Bbv12I GWGCWC 1 cut(s) 1125
BbvI GCAGC 5 cut(s) 159, 175, 796, 831, 1333
BccI CCATC 9 cut(s) 5, 725, 841, 914, 980, 1102, 1129, 1186, 1394
BceAI ACGGC 4 cut(s) 113, 772, 984, 1041
BciT130I CCWGG 2 cut(s) 122, 525
BcnI CCSGG 2 cut(s) 57, 912
BcoDI GTCTC 2 cut(s) 377, 898
BfaI CTAG 1 cut(s) 89
BisI GCNGC 7 cut(s) 164, 173, 338, 785, 820, 1148, 1322
BlsI GCNGC 7 cut(s) 165, 174, 339, 786, 821, 1149, 1323
Bme1390I CCNGG 4 cut(s) 57, 122, 525, 912
Bme18I GGWCC 1 cut(s) 722
BmeT110I CYCGRG 2 cut(s) 83, 644
BmgBI CACGTC 4 cut(s) 211, 751, 771, 1032
BmgT120I GGNCC 3 cut(s) 722, 1035, 1036
BmiI GGNNCC 7 cut(s) 266, 573, 602, 654, 724, 1037, 1038
BmrFI CCNGG 4 cut(s) 57, 122, 525, 912
BmsI GCATC 3 cut(s) 139, 690, 1308
BmtI GCTAGC 1 cut(s) 92
BpmI CTGGAG 1 cut(s) 1016
Bpu14I TTCGAA 1 cut(s) 942
BpuEI CTTGAG 1 cut(s) 401
BpuMI CCSGG 2 cut(s) 57, 912
BsaAI YACGTR 2 cut(s) 37, 70
BsaHI GRCGYC 1 cut(s) 971
BsaI GGTCTC 2 cut(s) 377, 898
BsaJI CCNNGG 3 cut(s) 112, 303, 1065
BsaWI WCCGGW 1 cut(s) 597
BsaXI ACNNNNNCTCC 2 cut(s) 1188, 1218
Bsc4I CCNNNNNNNGG 5 cut(s) 62, 898, 1045, 1066, 1217
Bse118I RCCGGY 2 cut(s) 597, 649
BseBI CCWGG 2 cut(s) 122, 525
BseDI CCNNGG 3 cut(s) 112, 303, 1065
BseGI GGATG 6 cut(s) 16, 213, 712, 925, 991, 1405
BseLI CCNNNNNNNGG 5 cut(s) 62, 898, 1045, 1066, 1217
BseMII CTCAG 1 cut(s) 866
BseRI GAGGAG 2 cut(s) 71, 1238
BseSI GKGCMC 2 cut(s) 1039, 1125
BseXI GCAGC 5 cut(s) 159, 175, 796, 831, 1333
Bsh1236I CGCG 2 cut(s) 161, 1157
BshFI GGCC 3 cut(s) 1037, 1147, 1210
BshNI GGYRCC 2 cut(s) 571, 652
BshTI ACCGGT 1 cut(s) 597
BsiHKAI GWGCWC 1 cut(s) 1125
BsiHKCI CYCGRG 2 cut(s) 83, 644
BsiSI CCGG 6 cut(s) 56, 598, 650, 912, 983, 1211
BslFI GGGAC 1 cut(s) 841
BslI CCNNNNNNNGG 5 cut(s) 62, 898, 1045, 1066, 1217
BsmAI GTCTC 2 cut(s) 377, 898
BsmFI GGGAC 1 cut(s) 841
BsmI GAATGC 1 cut(s) 1177
BsnI GGCC 3 cut(s) 1037, 1147, 1210
Bso31I GGTCTC 2 cut(s) 377, 898
BsoBI CYCGRG 2 cut(s) 83, 644
Bsp119I TTCGAA 1 cut(s) 942
Bsp120I GGGCCC 1 cut(s) 1035
Bsp1286I GDGCHC 2 cut(s) 1039, 1125
Bsp143I GATC 4 cut(s) 202, 264, 358, 550
BspANI GGCC 3 cut(s) 1037, 1147, 1210
BspCNI CTCAG 1 cut(s) 867
BspFNI CGCG 2 cut(s) 161, 1157
BspLI GGNNCC 7 cut(s) 266, 573, 602, 654, 724, 1037, 1038
BspOI GCTAGC 1 cut(s) 92
BspPI GGATC 3 cut(s) 259, 272, 353
BspT104I TTCGAA 1 cut(s) 942
BspT107I GGYRCC 2 cut(s) 571, 652
BspTNI GGTCTC 2 cut(s) 377, 898
BsrBI CCGCTC 1 cut(s) 917
BsrFI RCCGGY 2 cut(s) 597, 649
BssAI RCCGGY 2 cut(s) 597, 649
BssECI CCNNGG 3 cut(s) 112, 303, 1065
BssMI GATC 4 cut(s) 202, 264, 358, 550
BssNI GRCGYC 1 cut(s) 971
BssSI CACGAG 1 cut(s) 1005
Bst2BI CACGAG 1 cut(s) 1005
Bst2UI CCWGG 2 cut(s) 122, 525
Bst4CI ACNGT 1 cut(s) 709
BstACI GRCGYC 1 cut(s) 971
BstBAI YACGTR 2 cut(s) 37, 70
BstBI TTCGAA 1 cut(s) 942
BstC8I GCNNGC 3 cut(s) 90, 391, 533
BstDEI CTNAG 2 cut(s) 875, 1373
BstF5I GGATG 6 cut(s) 16, 213, 712, 925, 991, 1405
BstFNI CGCG 2 cut(s) 161, 1157
BstHHI GCGC 2 cut(s) 163, 665
BstKTI GATC 4 cut(s) 205, 267, 361, 553
BstMAI GTCTC 2 cut(s) 377, 898
BstMBI GATC 4 cut(s) 202, 264, 358, 550
BstNI CCWGG 2 cut(s) 122, 525
BstNSI RCATGY 1 cut(s) 535
BstSCI CCNGG 4 cut(s) 55, 120, 523, 910
BstSLI GKGCMC 2 cut(s) 1039, 1125
BstUI CGCG 2 cut(s) 161, 1157
BstV1I GCAGC 5 cut(s) 159, 175, 796, 831, 1333
BstX2I RGATCY 1 cut(s) 264
BstXI CCANNNNNNTGG 1 cut(s) 100
BstYI RGATCY 1 cut(s) 264
BsuRI GGCC 3 cut(s) 1037, 1147, 1210
BtrI CACGTC 4 cut(s) 211, 751, 771, 1032
BtsCI GGATG 6 cut(s) 16, 213, 712, 925, 991, 1405
BtsI GCAGTG 1 cut(s) 1087
BtsIMutI CAGTG 1 cut(s) 1087
Cac8I GCNNGC 3 cut(s) 90, 391, 533
CfoI GCGC 2 cut(s) 163, 665
Cfr10I RCCGGY 2 cut(s) 597, 649
Cfr13I GGNCC 3 cut(s) 722, 1035, 1036
CseI GACGC 3 cut(s) 838, 960, 1093
Csp6I GTAC 3 cut(s) 572, 653, 1407
CspAI ACCGGT 1 cut(s) 597
CviAII CATG 6 cut(s) 61, 227, 473, 532, 633, 863
CviQI GTAC 3 cut(s) 572, 653, 1407
DdeI CTNAG 2 cut(s) 875, 1373
DpnI GATC 4 cut(s) 204, 266, 360, 552
DpnII GATC 4 cut(s) 202, 264, 358, 550
DraI TTTAAA 1 cut(s) 670
DraIII CACNNNGTG 1 cut(s) 1129
EaeI YGGCCR 1 cut(s) 1145
EciI GGCGGA 2 cut(s) 854, 1259
Eco24I GRGCYC 1 cut(s) 1039
Eco31I GGTCTC 2 cut(s) 377, 898
Eco47I GGWCC 1 cut(s) 722
Eco57I CTGAAG 1 cut(s) 152
Eco72I CACGTG 1 cut(s) 70
Eco88I CYCGRG 2 cut(s) 83, 644
EcoO109I RGGNCCY 1 cut(s) 1036
EcoRII CCWGG 2 cut(s) 120, 523
EcoT38I GRGCYC 1 cut(s) 1039
FaeI CATG 6 cut(s) 64, 230, 476, 535, 636, 866
FaiI YATR 9 cut(s) 62, 228, 254, 474, 495, 533, 592, 634, 864
FaqI GGGAC 1 cut(s) 841
FatI CATG 6 cut(s) 60, 226, 472, 531, 632, 862
FauI CCCGC 6 cut(s) 166, 1006, 1047, 1085, 1210, 1358
FblI GTMKAC 1 cut(s) 108
Fnu4HI GCNGC 7 cut(s) 164, 173, 338, 785, 820, 1148, 1322
FokI GGATG 6 cut(s) 23, 200, 699, 932, 998, 1412
FriOI GRGCYC 1 cut(s) 1039
Fsp4HI GCNGC 7 cut(s) 164, 173, 338, 785, 820, 1148, 1322
FspBI CTAG 1 cut(s) 89
FspI TGCGCA 1 cut(s) 664
GlaI GCGC 2 cut(s) 162, 664
GluI GCNGC 7 cut(s) 164, 173, 338, 785, 820, 1148, 1322
GsuI CTGGAG 1 cut(s) 1016
HaeIII GGCC 3 cut(s) 1037, 1147, 1210
HapII CCGG 6 cut(s) 56, 598, 650, 912, 983, 1211
HgaI GACGC 3 cut(s) 838, 960, 1093
HhaI GCGC 2 cut(s) 163, 665
Hin1I GRCGYC 1 cut(s) 971
Hin1II CATG 6 cut(s) 64, 230, 476, 535, 636, 866
Hin6I GCGC 2 cut(s) 161, 663
HinP1I GCGC 2 cut(s) 161, 663
HincII GTYRAC 4 cut(s) 109, 450, 547, 748
HindII GTYRAC 4 cut(s) 109, 450, 547, 748
HindIII AAGCTT 1 cut(s) 934
HinfI GANTC 4 cut(s) 52, 755, 794, 888
HpaII CCGG 6 cut(s) 56, 598, 650, 912, 983, 1211
HphI GGTGA 6 cut(s) 133, 965, 1033, 1216, 1273, 1321
Hpy166II GTNNAC 8 cut(s) 109, 296, 450, 547, 628, 748, 805, 1123
Hpy188I TCNGA 5 cut(s) 202, 264, 281, 722, 760
Hpy188III TCNNGA 4 cut(s) 421, 625, 930, 995
Hpy8I GTNNAC 8 cut(s) 109, 296, 450, 547, 628, 748, 805, 1123
Hpy99I CGWCG 5 cut(s) 110, 359, 709, 976, 1033
HpyAV CCTTC 7 cut(s) 207, 278, 299, 1271, 1280, 1285, 1381
HpyCH4III ACNGT 1 cut(s) 709
HpyCH4IV ACGT 7 cut(s) 36, 69, 210, 410, 750, 770, 1031
HpyCH4V TGCA 7 cut(s) 137, 152, 476, 531, 594, 1123, 1321
HpyF3I CTNAG 2 cut(s) 875, 1373
HpySE526I ACGT 7 cut(s) 36, 69, 210, 410, 750, 770, 1031
Hsp92I GRCGYC 1 cut(s) 971
Hsp92II CATG 6 cut(s) 64, 230, 476, 535, 636, 866
HspAI GCGC 2 cut(s) 161, 663
KpnI GGTACC 2 cut(s) 575, 656
Kzo9I GATC 4 cut(s) 202, 264, 358, 550
LmnI GCTCC 4 cut(s) 841, 871, 914, 1159
Lsp1109I GCAGC 5 cut(s) 159, 175, 796, 831, 1333
LweI GCATC 3 cut(s) 139, 690, 1308
MaeI CTAG 1 cut(s) 89
MaeII ACGT 7 cut(s) 36, 69, 210, 410, 750, 770, 1031
MaeIII GTNAC 5 cut(s) 65, 70, 791, 1021, 1081
MalI GATC 4 cut(s) 204, 266, 360, 552
MbiI CCGCTC 1 cut(s) 917
MboI GATC 4 cut(s) 202, 264, 358, 550
MboII GAAGA 5 cut(s) 512, 545, 650, 931, 1177
MflI RGATCY 1 cut(s) 264
MhlI GDGCHC 2 cut(s) 1039, 1125
MluCI AATT 2 cut(s) 258, 273
MlyI GAGTC 2 cut(s) 61, 788
MmeI TCCRAC 1 cut(s) 849
MseI TTAA 2 cut(s) 320, 669
MslI CAYNNNNRTG 2 cut(s) 231, 623
MspA1I CMGCKG 2 cut(s) 172, 822
MspI CCGG 6 cut(s) 56, 598, 650, 912, 983, 1211
MspR9I CCNGG 4 cut(s) 57, 122, 525, 912
Mva1269I GAATGC 1 cut(s) 1177
MvaI CCWGG 2 cut(s) 122, 525
MvnI CGCG 2 cut(s) 161, 1157
NciI CCSGG 2 cut(s) 57, 912
NdeII GATC 4 cut(s) 202, 264, 358, 550
NheI GCTAGC 1 cut(s) 88
NlaIII CATG 6 cut(s) 64, 230, 476, 535, 636, 866
NlaIV GGNNCC 7 cut(s) 266, 573, 602, 654, 724, 1037, 1038
NmeAIII GCCGAG 1 cut(s) 93
NmuCI GTSAC 5 cut(s) 65, 70, 791, 1021, 1081
NsbI TGCGCA 1 cut(s) 664
NspI RCATGY 1 cut(s) 535
NspV TTCGAA 1 cut(s) 942
PaeI GCATGC 1 cut(s) 535
PaeR7I CTCGAG 2 cut(s) 83, 644
PctI GAATGC 1 cut(s) 1177
PfeI GAWTC 2 cut(s) 755, 888
PflFI GACNNNGTC 1 cut(s) 832
PfoI TCCNGGA 1 cut(s) 910
PinAI ACCGGT 1 cut(s) 597
PkrI GCNGC 7 cut(s) 165, 174, 339, 786, 821, 1149, 1323
PleI GAGTC 2 cut(s) 60, 788
PmaCI CACGTG 1 cut(s) 70
PmlI CACGTG 1 cut(s) 70
PpsI GAGTC 2 cut(s) 60, 788
Ppu21I YACGTR 2 cut(s) 37, 70
Psp6I CCWGG 2 cut(s) 120, 523
PspCI CACGTG 1 cut(s) 70
PspGI CCWGG 2 cut(s) 120, 523
PspN4I GGNNCC 7 cut(s) 266, 573, 602, 654, 724, 1037, 1038
PspOMI GGGCCC 1 cut(s) 1035
PspPI GGNCC 3 cut(s) 722, 1035, 1036
PspXI VCTCGAGB 2 cut(s) 83, 644
PsuI RGATCY 1 cut(s) 264
PsyI GACNNNGTC 1 cut(s) 832
PvuII CAGCTG 1 cut(s) 172
RsaI GTAC 3 cut(s) 573, 654, 1408
RsaNI GTAC 3 cut(s) 572, 653, 1407
RseI CAYNNNNRTG 2 cut(s) 231, 623
SalI GTCGAC 1 cut(s) 107
SaqAI TTAA 2 cut(s) 320, 669
SatI GCNGC 7 cut(s) 164, 173, 338, 785, 820, 1148, 1322
Sau3AI GATC 4 cut(s) 202, 264, 358, 550
Sau96I GGNCC 3 cut(s) 722, 1035, 1036
SchI GAGTC 2 cut(s) 61, 788
ScrFI CCNGG 4 cut(s) 57, 122, 525, 912
SduI GDGCHC 2 cut(s) 1039, 1125
SfaNI GCATC 3 cut(s) 139, 690, 1308
Sfr274I CTCGAG 2 cut(s) 83, 644
SfuI TTCGAA 1 cut(s) 942
SinI GGWCC 1 cut(s) 722
SlaI CTCGAG 2 cut(s) 83, 644
SmiMI CAYNNNNRTG 2 cut(s) 231, 623
SmlI CTYRAG 3 cut(s) 83, 380, 644
SmoI CTYRAG 3 cut(s) 83, 380, 644
SphI GCATGC 1 cut(s) 535
Sse9I AATT 2 cut(s) 258, 273
SspMI CTAG 1 cut(s) 89
StyD4I CCNGG 4 cut(s) 55, 120, 523, 910
TaaI ACNGT 1 cut(s) 709
TaiI ACGT 7 cut(s) 39, 72, 213, 413, 753, 773, 1034
TaqI TCGA 6 cut(s) 50, 84, 108, 357, 645, 942
TasI AATT 2 cut(s) 258, 273
TatI WGTACW 1 cut(s) 1406
TauI GCSGC 2 cut(s) 340, 1150
TfiI GAWTC 2 cut(s) 755, 888
Tru1I TTAA 2 cut(s) 320, 669
Tru9I TTAA 2 cut(s) 320, 669
TscAI CASTG 1 cut(s) 1094
TseFI GTSAC 5 cut(s) 65, 70, 791, 1021, 1081
TseI GCWGC 5 cut(s) 163, 172, 784, 819, 1321
Tsp45I GTSAC 5 cut(s) 65, 70, 791, 1021, 1081
TspDTI ATGAA 4 cut(s) 426, 461, 701, 1184
TspGWI ACGGA 1 cut(s) 351
TspRI CASTG 1 cut(s) 1094
Tth111I GACNNNGTC 1 cut(s) 832
VneI GTGCAC 1 cut(s) 1121
VpaK11BI GGWCC 1 cut(s) 722
XceI RCATGY 1 cut(s) 535
XhoI CTCGAG 2 cut(s) 83, 644
XmiI GTMKAC 1 cut(s) 108
XspI CTAG 1 cut(s) 89
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.