Rh6AG369500

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000103
Physical Location & Seq
Forward (+)
56761437 .. 56762669
1233 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG369500.1

Sequence Viewer

Length: 1233 bp
ATGGAGATGGAGTTGGATAGAATAAGCAACTTACCAAGTGATGTTACGGAAAAGATATTGTTATGCTTGCCAATTAGGGATGCAGTGAGGACGAGTGTTTTATCAACTACGTGGAGGTACAAATCGGCTATGCTACCACATCTGGTGTTTGATCCCCAGTCTATCTCAACTCAGCACCAAACATTTGCTAATGCTGTTGATCATTTACTCTTAAGTCACTTTGGCCCCGTATACAAGTTCAAGCTTGCTCGAGAACATGTATCCTTTAGAGATATCGATCGGTGGATACTTTACGCGTCAAGAAACTCCATCAAAGAGTTCATACTTGAAATCTTGGGACGGCAGCGCTATAAGGTGCCTTCATCTATGTTTTCATGTCAAGATTTGACTTATTTAGAGTTGCATAGATGTTTGCTACAACCGCCGTCCACATTCACAGGCTTCAAAAGTTTGAAGAGCCTAAAAATTGTTCGTGTTACTCTGACGGATGATGTGCTTGAAAATGTGATTGTTCGCTGTCCTCTACTTGAGCGGTTGACTGTGGAGTGGTGCTATGATTTCAGCCAGCTCAATATCAATGCACCAAATCTCCAGGTTCTTCGCTTTATGGGTGATTTTGAGGATGTTAATATATTAAATACCTCAAATCTCGTTGATGTTTTCATTTGGCTACGCAAGTTTGATCATAGACGGGGTCCTTGCAGATCTAGTAATCTGCTCAAGTTATTTGCTCAACTTCCCAATATTCACCGTCTTTACATGAACTCCAAATTTACAAAGTATTTGGCTGCTGGCTCCTTGCTGGAAAAGCTGCCTAAACCGTGTTTACATCTGCAATTTCTTATTGTAAGAGTAGGGATTGATGATGTTAAGGATATTATAACTGTTATTTGCCTTCTGAGAATCTCCCCTGCTCTGGAAGAATTAGAAGTTTTTGCTTTTTGCCGCCAAACATATGAAGCCGAAGTGGGAAAAGTGAACTCTTGGATTGCTGACAACCAGAGTTGCTCGTTCACTCAGCTGCGACATGTGAAAATACACTGCTCTCAGGCTGTTGAAGGTGCACTAGATTTGATCAGATTTCTGCTTTTAAGTTCACCTGCACTTGAGACAATGACGGTATATAAACATCCTTCCACTCCACTTGATGGTTATGATCTAGCAAAAAAGTTACTCCGGTTTAGGCGTGCATCACTGAATTTAGAGATAATTCTAAGTGATCTAGCAGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

410

Amino Acids

47.25

Weight (kDa)

8.68

Isoelectric Point (pI)

42.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 8 - 41 1e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 84 - 192 6.6e-14 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 92 - 311 5.5e-21 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 179 - 374 2e-08 At1g61320/AtMIF1, LRR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 881
AarI CACCTGC 1 cut(s) 1108
Acc36I ACCTGC 1 cut(s) 1108
AccB1I GGYRCC 1 cut(s) 355
AccB7I CCANNNNNTGG 1 cut(s) 1148
AccBSI CCGCTC 1 cut(s) 532
AccI GTMKAC 1 cut(s) 231
AccII CGCG 1 cut(s) 296
AciI CCGC 3 cut(s) 422, 532, 946
AclWI GGATC 1 cut(s) 146
AcsI RAATTY 2 cut(s) 770, 1198
AfaI GTAC 1 cut(s) 119
AfeI AGCGCT 1 cut(s) 347
AfiI CCNNNNNNNGG 2 cut(s) 916, 1148
AflII CTTAAG 1 cut(s) 211
AflIII ACRYGT 3 cut(s) 256, 294, 1027
AgsI TTSAA 6 cut(s) 241, 329, 445, 454, 500, 1058
AjnI CCWGG 1 cut(s) 591
AluBI AGCT 4 cut(s) 244, 568, 811, 1021
AluI AGCT 4 cut(s) 244, 568, 811, 1021
Alw21I GWGCWC 1 cut(s) 1066
Alw26I GTCTC 1 cut(s) 1103
Alw44I GTGCAC 1 cut(s) 1062
AlwI GGATC 1 cut(s) 146
Ama87I CYCGRG 1 cut(s) 249
Aor51HI AGCGCT 1 cut(s) 347
AoxI GGCC 1 cut(s) 223
ApaLI GTGCAC 1 cut(s) 1062
ApeKI GCWGC 4 cut(s) 343, 788, 811, 1021
ApoI RAATTY 2 cut(s) 770, 1198
AspLEI GCGC 1 cut(s) 348
AspS9I GGNCC 2 cut(s) 224, 695
AsuHPI GGTGA 3 cut(s) 623, 740, 1089
AvaI CYCGRG 1 cut(s) 249
AvaII GGWCC 1 cut(s) 695
BaeGI GKGCMC 1 cut(s) 1066
BanI GGYRCC 1 cut(s) 355
Bbv12I GWGCWC 1 cut(s) 1066
BbvI GCAGC 4 cut(s) 355, 775, 798, 1008
BccI CCATC 2 cut(s) 317, 1142
BceAI ACGGC 2 cut(s) 356, 409
BciT130I CCWGG 1 cut(s) 593
BciVI GTATCC 2 cut(s) 271, 279
BclI TGATCA 3 cut(s) 199, 682, 1074
BcoDI GTCTC 1 cut(s) 1103
BfaI CTAG 4 cut(s) 708, 1067, 1160, 1223
BfoI RGCGCY 1 cut(s) 349
BfrI CTTAAG 1 cut(s) 211
BfuAI ACCTGC 1 cut(s) 1108
BfuI GTATCC 2 cut(s) 271, 279
BglII AGATCT 1 cut(s) 704
BisI GCNGC 5 cut(s) 344, 789, 812, 946, 1022
BlsI GCNGC 5 cut(s) 345, 790, 813, 947, 1023
Bme1390I CCNGG 1 cut(s) 593
Bme18I GGWCC 1 cut(s) 695
BmeT110I CYCGRG 1 cut(s) 249
BmgT120I GGNCC 2 cut(s) 224, 695
BmiI GGNNCC 4 cut(s) 226, 357, 696, 796
BmrFI CCNGG 1 cut(s) 593
BmrI ACTGGG 1 cut(s) 151
BmsI GCATC 2 cut(s) 70, 1199
BmuI ACTGGG 1 cut(s) 151
BpmI CTGGAG 1 cut(s) 575
BpuEI CTTGAG 3 cut(s) 548, 704, 1127
Bsa29I ATCGAT 1 cut(s) 276
BsaAI YACGTR 1 cut(s) 111
BsaBI GATNNNNATC 1 cut(s) 276
BsaWI WCCGGW 1 cut(s) 1176
BsaXI ACNNNNNCTCC 5 cut(s) 26, 573, 603, 749, 779
Bsc4I CCNNNNNNNGG 2 cut(s) 916, 1148
Bse1I ACTGG 1 cut(s) 157
Bse8I GATNNNNATC 1 cut(s) 276
BseBI CCWGG 1 cut(s) 593
BseCI ATCGAT 1 cut(s) 276
BseGI GGATG 4 cut(s) 85, 493, 628, 1129
BseJI GATNNNNATC 1 cut(s) 276
BseLI CCNNNNNNNGG 2 cut(s) 916, 1148
BseMII CTCAG 4 cut(s) 185, 890, 1031, 1061
BseNI ACTGG 1 cut(s) 157
BseSI GKGCMC 1 cut(s) 1066
BseXI GCAGC 4 cut(s) 355, 775, 798, 1008
BsgI GTGCAG 1 cut(s) 1086
Bsh1236I CGCG 1 cut(s) 296
Bsh1285I CGRYCG 1 cut(s) 280
BshFI GGCC 1 cut(s) 225
BshNI GGYRCC 1 cut(s) 355
BshVI ATCGAT 1 cut(s) 276
BsiEI CGRYCG 1 cut(s) 280
BsiHKAI GWGCWC 1 cut(s) 1066
BsiHKCI CYCGRG 1 cut(s) 249
BsiSI CCGG 1 cut(s) 1177
BslFI GGGAC 1 cut(s) 351
BslI CCNNNNNNNGG 2 cut(s) 916, 1148
BsmAI GTCTC 1 cut(s) 1103
BsmFI GGGAC 1 cut(s) 351
BsnI GGCC 1 cut(s) 225
BsoBI CYCGRG 1 cut(s) 249
Bsp1286I GDGCHC 1 cut(s) 1066
Bsp143I GATC 8 cut(s) 151, 199, 277, 682, 704, 1074, 1156, 1219
BspACI CCGC 3 cut(s) 422, 532, 946
BspANI GGCC 1 cut(s) 225
BspCNI CTCAG 4 cut(s) 184, 891, 1030, 1060
BspDI ATCGAT 1 cut(s) 276
BspFNI CGCG 1 cut(s) 296
BspLI GGNNCC 4 cut(s) 226, 357, 696, 796
BspMI ACCTGC 1 cut(s) 1108
BspPI GGATC 1 cut(s) 146
BspQI GCTCTTC 1 cut(s) 449
BspT107I GGYRCC 1 cut(s) 355
BspTI CTTAAG 1 cut(s) 211
BsrBI CCGCTC 1 cut(s) 532
BsrI ACTGG 1 cut(s) 157
BssMI GATC 8 cut(s) 151, 199, 277, 682, 704, 1074, 1156, 1219
BssNAI GTATAC 1 cut(s) 232
Bst1107I GTATAC 1 cut(s) 232
Bst2UI CCWGG 1 cut(s) 593
Bst4CI ACNGT 5 cut(s) 541, 752, 822, 886, 1120
Bst6I CTCTTC 1 cut(s) 449
BstAFI CTTAAG 1 cut(s) 211
BstBAI YACGTR 1 cut(s) 111
BstC8I GCNNGC 5 cut(s) 68, 246, 566, 793, 1188
BstDEI CTNAG 5 cut(s) 171, 899, 1017, 1047, 1214
BstF5I GGATG 4 cut(s) 85, 493, 628, 1129
BstFNI CGCG 1 cut(s) 296
BstH2I RGCGCY 1 cut(s) 349
BstHHI GCGC 1 cut(s) 348
BstKTI GATC 8 cut(s) 154, 202, 280, 685, 707, 1077, 1159, 1222
BstMAI GTCTC 1 cut(s) 1103
BstMBI GATC 8 cut(s) 151, 199, 277, 682, 704, 1074, 1156, 1219
BstMCI CGRYCG 1 cut(s) 280
BstMWI GCNNNNNNNGC 2 cut(s) 421, 808
BstNI CCWGG 1 cut(s) 593
BstNSI RCATGY 2 cut(s) 260, 1031
BstSCI CCNGG 1 cut(s) 591
BstSLI GKGCMC 1 cut(s) 1066
BstUI CGCG 1 cut(s) 296
BstV1I GCAGC 4 cut(s) 355, 775, 798, 1008
BstX2I RGATCY 1 cut(s) 704
BstYI RGATCY 1 cut(s) 704
BstZ17I GTATAC 1 cut(s) 232
Bsu15I ATCGAT 1 cut(s) 276
BsuI GTATCC 2 cut(s) 271, 279
BsuRI GGCC 1 cut(s) 225
BsuTUI ATCGAT 1 cut(s) 276
BtsCI GGATG 4 cut(s) 85, 493, 628, 1129
BtsI GCAGTG 2 cut(s) 90, 1039
BtsIMutI CAGTG 3 cut(s) 90, 1039, 1193
BveI ACCTGC 1 cut(s) 1108
Cac8I GCNNGC 5 cut(s) 68, 246, 566, 793, 1188
CfoI GCGC 1 cut(s) 348
Cfr13I GGNCC 2 cut(s) 224, 695
ClaI ATCGAT 1 cut(s) 276
CseI GACGC 1 cut(s) 285
Csp6I GTAC 1 cut(s) 118
CspCI CAANNNNNGTGG 2 cut(s) 1126, 1161
CviAII CATG 4 cut(s) 257, 375, 760, 1028
CviQI GTAC 1 cut(s) 118
DdeI CTNAG 5 cut(s) 171, 899, 1017, 1047, 1214
DpnI GATC 8 cut(s) 153, 201, 279, 684, 706, 1076, 1158, 1221
DpnII GATC 8 cut(s) 151, 199, 277, 682, 704, 1074, 1156, 1219
Eam1104I CTCTTC 1 cut(s) 449
EarI CTCTTC 1 cut(s) 449
Eco32I GATATC 1 cut(s) 274
Eco47I GGWCC 1 cut(s) 695
Eco47III AGCGCT 1 cut(s) 347
Eco88I CYCGRG 1 cut(s) 249
EcoO109I RGGNCCY 1 cut(s) 695
EcoRII CCWGG 1 cut(s) 591
EcoRV GATATC 1 cut(s) 274
FaeI CATG 4 cut(s) 260, 378, 763, 1031
FaqI GGGAC 1 cut(s) 351
FatI CATG 4 cut(s) 256, 374, 759, 1027
FauNDI CATATG 1 cut(s) 955
FbaI TGATCA 3 cut(s) 199, 682, 1074
FblI GTMKAC 1 cut(s) 231
Fnu4HI GCNGC 5 cut(s) 344, 789, 812, 946, 1022
FokI GGATG 4 cut(s) 92, 500, 635, 1116
Fsp4HI GCNGC 5 cut(s) 344, 789, 812, 946, 1022
FspBI CTAG 4 cut(s) 708, 1067, 1160, 1223
GlaI GCGC 1 cut(s) 347
GluI GCNGC 5 cut(s) 344, 789, 812, 946, 1022
GsuI CTGGAG 1 cut(s) 575
HaeII RGCGCY 1 cut(s) 349
HaeIII GGCC 1 cut(s) 225
HapII CCGG 1 cut(s) 1177
HgaI GACGC 1 cut(s) 285
HhaI GCGC 1 cut(s) 348
Hin1II CATG 4 cut(s) 260, 378, 763, 1031
Hin6I GCGC 1 cut(s) 346
HinP1I GCGC 1 cut(s) 346
HincII GTYRAC 1 cut(s) 537
HindII GTYRAC 1 cut(s) 537
HindIII AAGCTT 1 cut(s) 242
HinfI GANTC 1 cut(s) 903
HpaII CCGG 1 cut(s) 1177
HphI GGTGA 3 cut(s) 623, 740, 1089
Hpy166II GTNNAC 8 cut(s) 232, 429, 537, 827, 979, 1014, 1064, 1097
Hpy188I TCNGA 3 cut(s) 483, 900, 1079
Hpy188III TCNNGA 4 cut(s) 251, 300, 380, 917
Hpy8I GTNNAC 8 cut(s) 232, 429, 537, 827, 979, 1014, 1064, 1097
HpyAV CCTTC 4 cut(s) 369, 905, 1052, 1143
HpyCH4III ACNGT 5 cut(s) 541, 752, 822, 886, 1120
HpyCH4IV ACGT 1 cut(s) 110
HpyCH4V TGCA 8 cut(s) 83, 403, 581, 702, 835, 1064, 1103, 1190
HpyF10VI GCNNNNNNNGC 2 cut(s) 421, 808
HpyF3I CTNAG 5 cut(s) 171, 899, 1017, 1047, 1214
HpySE526I ACGT 1 cut(s) 110
Hsp92II CATG 4 cut(s) 260, 378, 763, 1031
HspAI GCGC 1 cut(s) 346
Ksp22I TGATCA 3 cut(s) 199, 682, 1074
Kzo9I GATC 8 cut(s) 151, 199, 277, 682, 704, 1074, 1156, 1219
LguI GCTCTTC 1 cut(s) 449
LmnI GCTCC 1 cut(s) 800
Lsp1109I GCAGC 4 cut(s) 355, 775, 798, 1008
LweI GCATC 2 cut(s) 70, 1199
MaeI CTAG 4 cut(s) 708, 1067, 1160, 1223
MaeII ACGT 1 cut(s) 110
MaeIII GTNAC 4 cut(s) 43, 215, 475, 1170
MalI GATC 8 cut(s) 153, 201, 279, 684, 706, 1076, 1158, 1221
MbiI CCGCTC 1 cut(s) 532
MboI GATC 8 cut(s) 151, 199, 277, 682, 704, 1074, 1156, 1219
MboII GAAGA 3 cut(s) 466, 590, 932
MflI RGATCY 1 cut(s) 704
MhlI GDGCHC 1 cut(s) 1066
MluCI AATT 7 cut(s) 72, 465, 770, 836, 923, 1198, 1209
MluI ACGCGT 1 cut(s) 294
MnlI CCTC 5 cut(s) 81, 108, 531, 613, 652
MseI TTAA 5 cut(s) 212, 627, 635, 870, 1091
MspA1I CMGCKG 1 cut(s) 1021
MspCI CTTAAG 1 cut(s) 211
MspI CCGG 1 cut(s) 1177
MspR9I CCNGG 1 cut(s) 593
MvaI CCWGG 1 cut(s) 593
MvnI CGCG 1 cut(s) 296
MwoI GCNNNNNNNGC 2 cut(s) 421, 808
NdeI CATATG 1 cut(s) 955
NdeII GATC 8 cut(s) 151, 199, 277, 682, 704, 1074, 1156, 1219
NlaIII CATG 4 cut(s) 260, 378, 763, 1031
NlaIV GGNNCC 4 cut(s) 226, 357, 696, 796
NmuCI GTSAC 1 cut(s) 215
NspI RCATGY 2 cut(s) 260, 1031
PaeR7I CTCGAG 1 cut(s) 249
PaqCI CACCTGC 1 cut(s) 1108
PciI ACATGT 2 cut(s) 256, 1027
PciSI GCTCTTC 1 cut(s) 449
PfeI GAWTC 1 cut(s) 903
PflFI GACNNNGTC 1 cut(s) 693
PflMI CCANNNNNTGG 1 cut(s) 1148
PkrI GCNGC 5 cut(s) 345, 790, 813, 947, 1023
Ple19I CGATCG 1 cut(s) 280
Ppu21I YACGTR 1 cut(s) 111
PpuMI RGGWCCY 1 cut(s) 695
PscI ACATGT 2 cut(s) 256, 1027
PsiI TTATAA 1 cut(s) 881
Psp5II RGGWCCY 1 cut(s) 695
Psp6I CCWGG 1 cut(s) 591
PspGI CCWGG 1 cut(s) 591
PspN4I GGNNCC 4 cut(s) 226, 357, 696, 796
PspPI GGNCC 2 cut(s) 224, 695
PspPPI RGGWCCY 1 cut(s) 695
PsuI RGATCY 1 cut(s) 704
PsyI GACNNNGTC 1 cut(s) 693
PvuI CGATCG 1 cut(s) 280
PvuII CAGCTG 1 cut(s) 1021
RsaI GTAC 1 cut(s) 119
RsaNI GTAC 1 cut(s) 118
SapI GCTCTTC 1 cut(s) 449
SaqAI TTAA 5 cut(s) 212, 627, 635, 870, 1091
SatI GCNGC 5 cut(s) 344, 789, 812, 946, 1022
Sau3AI GATC 8 cut(s) 151, 199, 277, 682, 704, 1074, 1156, 1219
Sau96I GGNCC 2 cut(s) 224, 695
ScrFI CCNGG 1 cut(s) 593
SduI GDGCHC 1 cut(s) 1066
SfaNI GCATC 2 cut(s) 70, 1199
Sfr274I CTCGAG 1 cut(s) 249
SinI GGWCC 1 cut(s) 695
SlaI CTCGAG 1 cut(s) 249
SmlI CTYRAG 5 cut(s) 211, 249, 527, 719, 1106
SmoI CTYRAG 5 cut(s) 211, 249, 527, 719, 1106
Sse9I AATT 7 cut(s) 72, 465, 770, 836, 923, 1198, 1209
SsiI CCGC 3 cut(s) 422, 532, 946
SspI AATATT 1 cut(s) 745
SspMI CTAG 4 cut(s) 708, 1067, 1160, 1223
StyD4I CCNGG 1 cut(s) 591
TaaI ACNGT 5 cut(s) 541, 752, 822, 886, 1120
TaiI ACGT 1 cut(s) 113
TaqI TCGA 2 cut(s) 250, 276
TasI AATT 7 cut(s) 72, 465, 770, 836, 923, 1198, 1209
TauI GCSGC 1 cut(s) 948
TfiI GAWTC 1 cut(s) 903
Tru1I TTAA 5 cut(s) 212, 627, 635, 870, 1091
Tru9I TTAA 5 cut(s) 212, 627, 635, 870, 1091
TscAI CASTG 3 cut(s) 90, 1046, 1200
TseFI GTSAC 1 cut(s) 215
TseI GCWGC 4 cut(s) 343, 788, 811, 1021
Tsp45I GTSAC 1 cut(s) 215
TspDTI ATGAA 6 cut(s) 310, 351, 363, 652, 776, 972
TspGWI ACGGA 2 cut(s) 62, 500
TspRI CASTG 3 cut(s) 90, 1046, 1200
Tth111I GACNNNGTC 1 cut(s) 693
Van91I CCANNNNNTGG 1 cut(s) 1148
Vha464I CTTAAG 1 cut(s) 211
VneI GTGCAC 1 cut(s) 1062
VpaK11BI GGWCC 1 cut(s) 695
XapI RAATTY 2 cut(s) 770, 1198
XceI RCATGY 2 cut(s) 260, 1031
XhoI CTCGAG 1 cut(s) 249
XmiI GTMKAC 1 cut(s) 231
XspI CTAG 4 cut(s) 708, 1067, 1160, 1223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.