Rh6AG369300

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000103
Physical Location & Seq
Forward (+)
56755958 .. 56757492
1535 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG369300.1

Sequence Viewer

Length: 1161 bp
ATGAAAGAAAGTAAAACAGTCAAGTTGTGTTCGAATTTGACGGAGTTGGATAGAATTAGCAACTTACCGAGGGATCTTGCAGAAAAGATATTGTCACTTTTGCCAATTAGGGATGCAGTGAGGACGAGTGTTTTATCAACTAAGTGGAGGTACAAATCAGCTATGCTACCACATCTGGTGTTTGATGCTCCGCAACAAGCATTTGCGGCTGTTGTTGATCATAGATATGGATCGGTGGATACTTCACATGTCAAGAAACTCATCAAACAGTTCACACTTGAACACCAGGGAAACTGCTATAAGGTGCCTTCATCTATGTTTTCATGTCAAGGTTTGACTCATTTAGAGTTGCATAGATGTTTGCTACAACCGCCTTCCACATTCACAGGCTTCAAAAGTTTGAAAAGCCTGACAATTGTTCGTGTTAGTCTGACGGACGATGTGCTTGAAAATATGATTGTTCACTGTCCACTACTTGAGCGGTTGACTGTCGAGTTCTGTGATTATTTCAGCCAACTCAATATCAATGCACCAAATCTCCGATTTCTTTACTTTATTGGTGATTTTGAGGATATTAATATTGTGAATACCTCAAATCTTGTTGATGCTATAATTGTTTTGCTAGACAGGAGAAGTGTTCCTTGCAGATCTACAAATTTGCTAAAGTTCTTTGCAAGCCTTCCCCATATTCAGAGGCTTAGCATCAGCAACTCCTTTATAAAGTATTTGGCTATTGGTTCCCCGCTGCAAAAGCTGCCTATTCCATGTTTACATTTAAAATTTTTTACCTTAAGCATATGCTATAATGATCCAGAAGATTTTTTAACTGCTCTTTGTCTTTTGAAAAGCTCCCCTGCTCTGGAAGAATTAAATATTTTTGCTTTTGGCAGTCAACATTATCAGGCTGATGCCGGAAAAAGTTGCGTTGATGAGAACCAGAGTTGCTCGTTCACGCAGCTGAGACGTGTGAAAATATCTGACTTCCCTGCTGTCGAACCTGCAATAGATTTTGTCAAATTTCTGCTTTTAAGTTCACCTGCGCTTGAGACGATGACTTTATATCAAGACGAGTCTGTACCTTCTCATGATGGTTTTGATTTAGCAAAAACGTTACTCCGGTTTAGGCGTGCATCGGTGAAGCTAGAGATAATTCTACTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

386

Amino Acids

43.71

Weight (kDa)

7.94

Isoelectric Point (pI)

44.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 19 - 52 3.3e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 84 - 354 1e-17 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 97 - 292 1.6e-19 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 719
AarI CACCTGC 1 cut(s) 1045
Acc36I ACCTGC 2 cut(s) 1006, 1045
AccB1I GGYRCC 1 cut(s) 304
AccBSI CCGCTC 1 cut(s) 481
AciI CCGC 5 cut(s) 191, 206, 371, 481, 743
AclI AACGTT 1 cut(s) 1109
AclWI GGATC 3 cut(s) 81, 238, 803
AcsI RAATTY 4 cut(s) 34, 655, 779, 1016
AfaI GTAC 2 cut(s) 152, 1077
AfiI CCNNNNNNNGG 1 cut(s) 859
AflII CTTAAG 1 cut(s) 790
AflIII ACRYGT 2 cut(s) 247, 964
AgsI TTSAA 5 cut(s) 281, 394, 403, 449, 844
AjiI CACGTC 1 cut(s) 965
AjnI CCWGG 1 cut(s) 285
AluBI AGCT 5 cut(s) 161, 754, 849, 958, 1141
AluI AGCT 5 cut(s) 161, 754, 849, 958, 1141
Alw26I GTCTC 2 cut(s) 955, 1040
AlwI GGATC 3 cut(s) 81, 238, 803
ApeKI GCWGC 3 cut(s) 745, 754, 955
ApoI RAATTY 4 cut(s) 34, 655, 779, 1016
AseI ATTAAT 1 cut(s) 576
AspLEI GCGC 1 cut(s) 1042
AsuHPI GGTGA 3 cut(s) 572, 1026, 1147
AsuII TTCGAA 1 cut(s) 32
BanI GGYRCC 1 cut(s) 304
BbvI GCAGC 3 cut(s) 732, 741, 967
BccI CCATC 1 cut(s) 1082
BciT130I CCWGG 1 cut(s) 287
BciVI GTATCC 1 cut(s) 232
BclI TGATCA 1 cut(s) 217
BcoDI GTCTC 2 cut(s) 955, 1040
BfaI CTAG 2 cut(s) 623, 1142
BfrI CTTAAG 1 cut(s) 790
BfuAI ACCTGC 2 cut(s) 1006, 1045
BfuI GTATCC 1 cut(s) 232
BglII AGATCT 1 cut(s) 647
BisI GCNGC 4 cut(s) 207, 746, 755, 956
BlpI GCTNAGC 1 cut(s) 698
BlsI GCNGC 4 cut(s) 208, 747, 756, 957
Bme1390I CCNGG 1 cut(s) 287
BmgBI CACGTC 1 cut(s) 965
BmiI GGNNCC 2 cut(s) 306, 739
BmrFI CCNGG 1 cut(s) 287
BmsI GCATC 6 cut(s) 103, 175, 595, 711, 898, 1139
Bpu1102I GCTNAGC 1 cut(s) 698
Bpu14I TTCGAA 1 cut(s) 32
BpuEI CTTGAG 2 cut(s) 497, 1064
BsaBI GATNNNNATC 1 cut(s) 229
BsaJI CCNNGG 2 cut(s) 68, 286
BsaWI WCCGGW 1 cut(s) 1116
BsaXI ACNNNNNCTCC 2 cut(s) 522, 552
Bsc4I CCNNNNNNNGG 1 cut(s) 859
Bse8I GATNNNNATC 1 cut(s) 229
BseBI CCWGG 1 cut(s) 287
BseDI CCNNGG 2 cut(s) 68, 286
BseGI GGATG 1 cut(s) 118
BseJI GATNNNNATC 1 cut(s) 229
BseLI CCNNNNNNNGG 1 cut(s) 859
BseMII CTCAG 1 cut(s) 950
BseXI GCAGC 3 cut(s) 732, 741, 967
BshNI GGYRCC 1 cut(s) 304
BsiSI CCGG 2 cut(s) 912, 1117
BslI CCNNNNNNNGG 1 cut(s) 859
BsmAI GTCTC 2 cut(s) 955, 1040
BsmBI CGTCTC 2 cut(s) 955, 1040
Bsp119I TTCGAA 1 cut(s) 32
Bsp143I GATC 5 cut(s) 73, 217, 230, 647, 808
Bsp1720I GCTNAGC 1 cut(s) 698
BspACI CCGC 5 cut(s) 191, 206, 371, 481, 743
BspCNI CTCAG 1 cut(s) 951
BspHI TCATGA 1 cut(s) 1084
BspLI GGNNCC 2 cut(s) 306, 739
BspMI ACCTGC 2 cut(s) 1006, 1045
BspPI GGATC 3 cut(s) 81, 238, 803
BspT104I TTCGAA 1 cut(s) 32
BspT107I GGYRCC 1 cut(s) 304
BspTI CTTAAG 1 cut(s) 790
BsrBI CCGCTC 1 cut(s) 481
BssECI CCNNGG 2 cut(s) 68, 286
BssMI GATC 5 cut(s) 73, 217, 230, 647, 808
Bst2UI CCWGG 1 cut(s) 287
Bst4CI ACNGT 4 cut(s) 19, 270, 467, 490
BstAFI CTTAAG 1 cut(s) 790
BstAPI GCANNNNNTGC 1 cut(s) 754
BstBI TTCGAA 1 cut(s) 32
BstC8I GCNNGC 2 cut(s) 676, 1128
BstDEI CTNAG 3 cut(s) 141, 698, 959
BstF5I GGATG 1 cut(s) 118
BstHHI GCGC 1 cut(s) 1042
BstKTI GATC 5 cut(s) 76, 220, 233, 650, 811
BstMAI GTCTC 2 cut(s) 955, 1040
BstMBI GATC 5 cut(s) 73, 217, 230, 647, 808
BstMWI GCNNNNNNNGC 4 cut(s) 206, 370, 751, 754
BstNI CCWGG 1 cut(s) 287
BstNSI RCATGY 1 cut(s) 251
BstSCI CCNGG 1 cut(s) 285
BstV1I GCAGC 3 cut(s) 732, 741, 967
BstX2I RGATCY 2 cut(s) 73, 647
BstYI RGATCY 2 cut(s) 73, 647
BsuI GTATCC 1 cut(s) 232
BtrI CACGTC 1 cut(s) 965
BtsCI GGATG 1 cut(s) 118
BtsI GCAGTG 1 cut(s) 123
BtsIMutI CAGTG 2 cut(s) 123, 463
BveI ACCTGC 2 cut(s) 1006, 1045
Cac8I GCNNGC 2 cut(s) 676, 1128
CciI TCATGA 1 cut(s) 1084
CfoI GCGC 1 cut(s) 1042
Csp6I GTAC 2 cut(s) 151, 1076
CviAII CATG 4 cut(s) 248, 324, 765, 1085
CviQI GTAC 2 cut(s) 151, 1076
DdeI CTNAG 3 cut(s) 141, 698, 959
DpnI GATC 5 cut(s) 75, 219, 232, 649, 810
DpnII GATC 5 cut(s) 73, 217, 230, 647, 808
DraI TTTAAA 1 cut(s) 777
EcoRII CCWGG 1 cut(s) 285
Esp3I CGTCTC 2 cut(s) 955, 1040
FaeI CATG 4 cut(s) 251, 327, 768, 1088
FalI AAGNNNNNCTT 2 cut(s) 625, 657
FatI CATG 4 cut(s) 247, 323, 764, 1084
FauI CCCGC 1 cut(s) 750
FauNDI CATATG 1 cut(s) 797
FbaI TGATCA 1 cut(s) 217
Fnu4HI GCNGC 4 cut(s) 207, 746, 755, 956
FokI GGATG 1 cut(s) 125
Fsp4HI GCNGC 4 cut(s) 207, 746, 755, 956
FspBI CTAG 2 cut(s) 623, 1142
GlaI GCGC 1 cut(s) 1041
GluI GCNGC 4 cut(s) 207, 746, 755, 956
HapII CCGG 2 cut(s) 912, 1117
HhaI GCGC 1 cut(s) 1042
Hin1II CATG 4 cut(s) 251, 327, 768, 1088
Hin6I GCGC 1 cut(s) 1040
HinP1I GCGC 1 cut(s) 1040
HincII GTYRAC 2 cut(s) 486, 893
HindII GTYRAC 2 cut(s) 486, 893
HinfI GANTC 2 cut(s) 337, 1070
HpaII CCGG 2 cut(s) 912, 1117
HphI GGTGA 3 cut(s) 572, 1026, 1147
Hpy166II GTNNAC 8 cut(s) 273, 463, 470, 486, 770, 893, 951, 1034
Hpy188I TCNGA 5 cut(s) 432, 542, 693, 979, 1160
Hpy188III TCNNGA 5 cut(s) 253, 812, 860, 1064, 1085
Hpy8I GTNNAC 8 cut(s) 273, 463, 470, 486, 770, 893, 951, 1034
HpyAV CCTTC 4 cut(s) 318, 384, 689, 1089
HpyCH4III ACNGT 4 cut(s) 19, 270, 467, 490
HpyCH4IV ACGT 2 cut(s) 964, 1109
HpyCH4V TGCA 9 cut(s) 80, 116, 352, 530, 645, 674, 748, 1001, 1130
HpyF10VI GCNNNNNNNGC 4 cut(s) 206, 370, 751, 754
HpyF3I CTNAG 3 cut(s) 141, 698, 959
HpySE526I ACGT 2 cut(s) 964, 1109
Hsp92II CATG 4 cut(s) 251, 327, 768, 1088
HspAI GCGC 1 cut(s) 1040
Ksp22I TGATCA 1 cut(s) 217
Kzo9I GATC 5 cut(s) 73, 217, 230, 647, 808
LmnI GCTCC 2 cut(s) 193, 854
Lsp1109I GCAGC 3 cut(s) 732, 741, 967
LweI GCATC 6 cut(s) 103, 175, 595, 711, 898, 1139
MaeI CTAG 2 cut(s) 623, 1142
MaeII ACGT 2 cut(s) 964, 1109
MaeIII GTNAC 2 cut(s) 93, 1110
MalI GATC 5 cut(s) 75, 219, 232, 649, 810
MbiI CCGCTC 1 cut(s) 481
MboI GATC 5 cut(s) 73, 217, 230, 647, 808
MboII GAAGA 2 cut(s) 827, 875
MfeI CAATTG 1 cut(s) 414
MflI RGATCY 2 cut(s) 73, 647
MlyI GAGTC 2 cut(s) 331, 1079
MmeI TCCRAC 1 cut(s) 27
MnlI CCTC 6 cut(s) 63, 114, 141, 562, 601, 687
MseI TTAA 6 cut(s) 576, 776, 791, 824, 869, 1028
MslI CAYNNNNRTG 1 cut(s) 225
MspA1I CMGCKG 2 cut(s) 745, 958
MspCI CTTAAG 1 cut(s) 790
MspI CCGG 2 cut(s) 912, 1117
MspR9I CCNGG 1 cut(s) 287
MunI CAATTG 1 cut(s) 414
MvaI CCWGG 1 cut(s) 287
MwoI GCNNNNNNNGC 4 cut(s) 206, 370, 751, 754
NdeI CATATG 1 cut(s) 797
NdeII GATC 5 cut(s) 73, 217, 230, 647, 808
NlaIII CATG 4 cut(s) 251, 327, 768, 1088
NlaIV GGNNCC 2 cut(s) 306, 739
NmuCI GTSAC 1 cut(s) 93
NspI RCATGY 1 cut(s) 251
NspV TTCGAA 1 cut(s) 32
PagI TCATGA 1 cut(s) 1084
PaqCI CACCTGC 1 cut(s) 1045
PciI ACATGT 1 cut(s) 247
PkrI GCNGC 4 cut(s) 208, 747, 756, 957
PleI GAGTC 2 cut(s) 331, 1078
PpsI GAGTC 2 cut(s) 331, 1078
PscI ACATGT 1 cut(s) 247
PshBI ATTAAT 1 cut(s) 576
PsiI TTATAA 1 cut(s) 719
Psp1406I AACGTT 1 cut(s) 1109
Psp6I CCWGG 1 cut(s) 285
PspGI CCWGG 1 cut(s) 285
PspN4I GGNNCC 2 cut(s) 306, 739
PsuI RGATCY 2 cut(s) 73, 647
PvuII CAGCTG 1 cut(s) 958
RsaI GTAC 2 cut(s) 152, 1077
RsaNI GTAC 2 cut(s) 151, 1076
RseI CAYNNNNRTG 1 cut(s) 225
SaqAI TTAA 6 cut(s) 576, 776, 791, 824, 869, 1028
SatI GCNGC 4 cut(s) 207, 746, 755, 956
Sau3AI GATC 5 cut(s) 73, 217, 230, 647, 808
SchI GAGTC 2 cut(s) 331, 1079
ScrFI CCNGG 1 cut(s) 287
SfaNI GCATC 6 cut(s) 103, 175, 595, 711, 898, 1139
SfuI TTCGAA 1 cut(s) 32
SmiMI CAYNNNNRTG 1 cut(s) 225
SmlI CTYRAG 3 cut(s) 476, 790, 1043
SmoI CTYRAG 3 cut(s) 476, 790, 1043
SsiI CCGC 5 cut(s) 191, 206, 371, 481, 743
SspI AATATT 2 cut(s) 580, 874
SspMI CTAG 2 cut(s) 623, 1142
StyD4I CCNGG 1 cut(s) 285
TaaI ACNGT 4 cut(s) 19, 270, 467, 490
TaiI ACGT 2 cut(s) 967, 1112
TaqI TCGA 3 cut(s) 32, 492, 993
TauI GCSGC 1 cut(s) 209
Tru1I TTAA 6 cut(s) 576, 776, 791, 824, 869, 1028
Tru9I TTAA 6 cut(s) 576, 776, 791, 824, 869, 1028
TscAI CASTG 2 cut(s) 123, 470
TseFI GTSAC 1 cut(s) 93
TseI GCWGC 3 cut(s) 745, 754, 955
Tsp45I GTSAC 1 cut(s) 93
TspDTI ATGAA 3 cut(s) 17, 300, 312
TspGWI ACGGA 2 cut(s) 56, 449
TspRI CASTG 2 cut(s) 123, 470
Vha464I CTTAAG 1 cut(s) 790
VspI ATTAAT 1 cut(s) 576
XapI RAATTY 4 cut(s) 34, 655, 779, 1016
XceI RCATGY 1 cut(s) 251
XspI CTAG 2 cut(s) 623, 1142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.