RLG00000015132

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000103
Physical Location & Seq
Forward (+)
62136732 .. 62140717
3986 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015132

Sequence Viewer

Length: 2202 bp
ATGGAGATGGATAGAATTAGCAGTTTACCAAATGATATCACAGAAAAGATTTTGTCATGTTTGCCGCTTAGGGACGCAGTGAGGGCAAGTGTTTTATCCAGCAAGTGGAGGTACAAGTCGGCCATGCTTCAAGATCTAGAATTTGATGAGTTTTTCTGGAGGAGAAGCCAAGATTGGGAGTTTGATGATGATGATTATCAAATCCACACCTTTGGGAACATGATTGATCATGTGCTCTTAGTTCATATTGTCCCCATACGCAAGTTCAACCTAGCCTGTACCATGGAAGAGTGTTTGCTCAAACCTCCGTCAACATTCAAAGGGTTCAAGAGTTTGAAGAGTCTTCAACTCCACGCTGTTGACGAGGCCCAAGATGCGTTTGAAAATTTGGTTCGTTGCAGTCCTCTGCTTGAGAGATTAACATTGCGGCATTGTGACGGTGTCACCAATCTCAAAATTGATGCACCGAATCTCCAATATGTGCACGTTTTAGGTGTTTTTAATGTCATTAACCTTGAGAATGCCTTGAGTATTACTGAGGCTGAAATTTGTATGAACATCCATAATGACCAAATAGGGGTTCCTGCCGGTTGGATTCCTGCTTGCAGTTCTAGCAATTTGCTCAAGATCTTTGATCACCTACCTCATATTCGAAGGCTTGAAATTAAGTGGCGCTTTTTAGAGTACTTGTCTGTGGGCTCTTTGCCAGAAACGCTCAATAAACCATGTCAATATCTGAATGCTCTTTCTATAGACATATGCTTCGACGCTCCGGATGCAATTCCAACTGCTCTATGCCTTCTGAGAAGCTCCCCTGCTCTACAAGAGCTAGAAATTGTGGTAAAAGCAAAGAAAAGCCGCAGCACCCTACAGTACGAAGTTACAAACACAGGAGAACAAGAACAGTCAAGAGATCCGGGTCATGAATTAGTGATCAAGTTGGAGTGTGCTGCCATGGGACTGAAAATGGAGTTGGATAGAATTACCAGTTTATCAGATGATGTTACAGAAAACATTTTGGCACGTTTGCCTCTTAAGGAGGCAGTAAGGACAAGTATTTTATCCAGAAAGTGGAGGTACAAATCAGAAGGGCTTCAAGATCTAGTGTTTGATGATCAGTGTGTCTCGACTCAAAGTCATCCAACCTGCAGCTTTGTGAATATCGTTGATCATGTACTCTTGGTCCACACTGGCCCCATACGCAAGTTCAAGCTTTCTCGCAAAGAGACGCTAGCCACTAGAGACATGGACAGATGGATATTGCATCTATCGAGAAACCCTGTCATCAAAGAGATGATAATTGAGTTTTGGATAGGGAATCCCTACAACATTCCATCATGTTTGTTTTTTTGTCAAGATATTGCTTATTTGGAATTATTCAGGTGTTTGCTAAACCCTCCTCCGTCTACATGCAAAGGCTTCAGGAGTTTGAAGACCCTTTTTCTTGAGAATGTTACCATGGCCCAAGATGTGTTTGAGAACTTGATTGGTTGCAGCCCTCTACTTGAGATATTGACGTTGATAAGTTGTGATGGTTTCACCAATCTCAAGATTGATGCACCGAAGCTCCGGTTGATTGACATAATAGGGGTCTTTGTAGAGTTTGAGTTCGTAGATTCCTCAAATCTTGTGGATGCTTCCTTTGATTTGCAGGTTATTGTTGATCAAACAGGGAATTGTAGTAATTCTGGGAATTTGCTCAGGTTTTTTGATCACCAGCTGCCTCATATTCAAAGGCTCACAATAAAGAGCAACTTTCTAAAATACTTGTCTATTGGTGCCATGCCATTGAAGCTCCCTAAACCATGCCAATATCTCAATTTTCTTTCTTTAGACATGAACTTCGACAAGCTGGATGAAATTTCAACTGTCTTATGCCTTCTGAGAAGCTCCCCTACTCTACAAGAATTACAAATTTTGGTGGACCCTGAAAAGGATCACGCTGATGTGGGAGAAGTGGAATCTTGTTTATATGACAACTACAACTGTGCATACACTCAACTGCGGCTTGTGAAAATTACCAAAATCTCTTGTGTAGAAGCTCAACTAGATTTCATCAAATTTCTACTTCTAAGTTCACCTGTACTTGAGAGAATGACTGTTCAACCTGCTTCTCTCGATGGTTTTTCAAAGCTAGTAAAAGATTTACTTCTGTTTAAGCGTGATTCACGGCGTGCAGAGATAATGCTTTTGGACCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

734

Amino Acids

83.67

Weight (kDa)

5.45

Isoelectric Point (pI)

50.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 38 3.9e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 95 - 291 4.1e-11 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 102 - 279 1.9e-09 FBD-associated F-box protein At5g56370, LRR repeats
F-box PF00646 328 - 360 6.3e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 400 - 702 9e-15 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 417 - 639 1.7e-17 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 1154, 1642, 2116
AccB1I GGYRCC 1 cut(s) 1778
AccB7I CCANNNNNTGG 2 cut(s) 105, 1071
AccI GTMKAC 1 cut(s) 1406
AccIII TCCGGA 1 cut(s) 772
AciI CCGC 4 cut(s) 65, 427, 859, 2005
AclWI GGATC 2 cut(s) 908, 1944
AcoI YGGCCR 1 cut(s) 120
AcsI RAATTY 7 cut(s) 140, 385, 546, 1693, 1860, 1914, 2060
AcuI CTGAAG 1 cut(s) 1405
AdeI CACNNNGTG 1 cut(s) 2174
AfaI GTAC 7 cut(s) 113, 280, 686, 875, 1079, 1176, 2085
AfiI CCNNNNNNNGG 5 cut(s) 105, 175, 577, 1071, 1933
AflII CTTAAG 1 cut(s) 1034
AhdI GACNNNNNGTC 1 cut(s) 1134
AjuI GAANNNNNNNTTGG 6 cut(s) 157, 189, 564, 596, 956, 988
Alw21I GWGCWC 2 cut(s) 237, 486
Alw26I GTCTC 3 cut(s) 1129, 1220, 1236
Alw44I GTGCAC 1 cut(s) 482
AlwI GGATC 2 cut(s) 908, 1944
Aor13HI TCCGGA 1 cut(s) 772
AoxI GGCC 4 cut(s) 120, 366, 1192, 1461
ApaLI GTGCAC 1 cut(s) 482
ApeKI GCWGC 5 cut(s) 861, 950, 1149, 1494, 1720
ApoI RAATTY 7 cut(s) 140, 385, 546, 1693, 1860, 1914, 2060
ArsI GACNNNNNNTTYG 4 cut(s) 746, 778, 1826, 1858
Asp700I GAANNNNTTC 1 cut(s) 1092
AspLEI GCGC 1 cut(s) 675
AspS9I GGNCC 6 cut(s) 367, 1183, 1193, 1462, 1924, 2194
AsuC2I CCSGG 1 cut(s) 918
AsuHPI GGTGA 5 cut(s) 436, 629, 1531, 1706, 2070
AsuII TTCGAA 1 cut(s) 652
AsuNHI GCTAGC 1 cut(s) 1231
AvaII GGWCC 3 cut(s) 1183, 1924, 2194
BaeGI GKGCMC 1 cut(s) 486
BanI GGYRCC 1 cut(s) 1778
BanII GRGCYC 1 cut(s) 701
BarI GAAGNNNNNNTAC 2 cut(s) 1879, 1911
BbsI GAAGAC 2 cut(s) 335, 1439
Bbv12I GWGCWC 2 cut(s) 237, 486
BbvI GCAGC 5 cut(s) 873, 937, 1161, 1506, 1707
BccI CCATC 4 cut(s) 1248, 1342, 1526, 2114
BceAI ACGGC 1 cut(s) 2186
BclI TGATCA 7 cut(s) 226, 634, 933, 1114, 1168, 1663, 1711
BcnI CCSGG 1 cut(s) 918
BcoDI GTCTC 3 cut(s) 1129, 1220, 1236
BfaI CTAG 9 cut(s) 137, 272, 612, 830, 1103, 1232, 1239, 2048, 2135
BfmI CTRYAG 3 cut(s) 750, 869, 1147
BfoI RGCGCY 1 cut(s) 676
BfrI CTTAAG 1 cut(s) 1034
BfuAI ACCTGC 3 cut(s) 1154, 1642, 2116
BglII AGATCT 3 cut(s) 133, 627, 1099
BisI GCNGC 9 cut(s) 65, 428, 859, 862, 951, 1150, 1495, 1721, 2006
BlsI GCNGC 9 cut(s) 66, 429, 860, 863, 952, 1151, 1496, 1722, 2007
BmcAI AGTACT 1 cut(s) 686
Bme1390I CCNGG 1 cut(s) 918
Bme18I GGWCC 3 cut(s) 1183, 1924, 2194
BmeRI GACNNNNNGTC 1 cut(s) 1134
BmgT120I GGNCC 6 cut(s) 367, 1183, 1193, 1462, 1924, 2194
BmiI GGNNCC 5 cut(s) 582, 1195, 1780, 1926, 2196
BmrFI CCNGG 1 cut(s) 918
BmsI GCATC 6 cut(s) 364, 451, 766, 1273, 1546, 1624
BmtI GCTAGC 1 cut(s) 1235
BpiI GAAGAC 2 cut(s) 335, 1439
BpmI CTGGAG 1 cut(s) 178
Bpu10I CCTNAGC 2 cut(s) 68, 1700
Bpu14I TTCGAA 1 cut(s) 652
BpuEI CTTGAG 8 cut(s) 431, 536, 547, 608, 1466, 1526, 1532, 2108
BpuMI CCSGG 1 cut(s) 918
BsaBI GATNNNNATC 1 cut(s) 195
BsaJI CCNNGG 3 cut(s) 282, 954, 1458
BsaWI WCCGGW 2 cut(s) 772, 1569
BsaXI ACNNNNNCTCC 4 cut(s) 456, 486, 1551, 1581
Bsc4I CCNNNNNNNGG 5 cut(s) 105, 175, 577, 1071, 1933
Bse118I RCCGGY 1 cut(s) 587
Bse1I ACTGG 2 cut(s) 987, 1195
Bse3DI GCAATG 1 cut(s) 422
Bse8I GATNNNNATC 1 cut(s) 195
BseAI TCCGGA 1 cut(s) 772
BseDI CCNNGG 3 cut(s) 282, 954, 1458
BseGI GGATG 5 cut(s) 558, 781, 1138, 1639, 1861
BseJI GATNNNNATC 1 cut(s) 195
BseLI CCNNNNNNNGG 5 cut(s) 105, 175, 577, 1071, 1933
BseMI GCAATG 1 cut(s) 422
BseMII CTCAG 4 cut(s) 528, 794, 1714, 1874
BseNI ACTGG 2 cut(s) 987, 1195
BseRI GAGGAG 2 cut(s) 175, 1389
BseSI GKGCMC 1 cut(s) 486
BseXI GCAGC 5 cut(s) 873, 937, 1161, 1506, 1707
BsgI GTGCAG 1 cut(s) 2196
BshFI GGCC 4 cut(s) 122, 368, 1194, 1463
BshNI GGYRCC 1 cut(s) 1778
BsiHKAI GWGCWC 2 cut(s) 237, 486
BsiSI CCGG 4 cut(s) 588, 773, 917, 1570
BslFI GGGAC 3 cut(s) 86, 236, 972
BslI CCNNNNNNNGG 5 cut(s) 105, 175, 577, 1071, 1933
BsmAI GTCTC 3 cut(s) 1129, 1220, 1236
BsmBI CGTCTC 1 cut(s) 1220
BsmFI GGGAC 3 cut(s) 86, 236, 972
BsmI GAATGC 2 cut(s) 526, 745
BsnI GGCC 4 cut(s) 122, 368, 1194, 1463
Bsp119I TTCGAA 1 cut(s) 652
Bsp1286I GDGCHC 3 cut(s) 237, 486, 701
Bsp13I TCCGGA 1 cut(s) 772
Bsp19I CCATGG 3 cut(s) 282, 954, 1458
BspACI CCGC 4 cut(s) 65, 427, 859, 2005
BspANI GGCC 4 cut(s) 122, 368, 1194, 1463
BspCNI CTCAG 4 cut(s) 529, 795, 1713, 1875
BspEI TCCGGA 1 cut(s) 772
BspHI TCATGA 1 cut(s) 922
BspLI GGNNCC 5 cut(s) 582, 1195, 1780, 1926, 2196
BspMAI CTGCAG 1 cut(s) 1151
BspMI ACCTGC 3 cut(s) 1154, 1642, 2116
BspOI GCTAGC 1 cut(s) 1235
BspPI GGATC 2 cut(s) 908, 1944
BspT104I TTCGAA 1 cut(s) 652
BspT107I GGYRCC 1 cut(s) 1778
BspTI CTTAAG 1 cut(s) 1034
BsrDI GCAATG 1 cut(s) 422
BsrFI RCCGGY 1 cut(s) 587
BsrI ACTGG 2 cut(s) 987, 1195
BssAI RCCGGY 1 cut(s) 587
BssECI CCNNGG 3 cut(s) 282, 954, 1458
BssT1I CCWWGG 3 cut(s) 282, 954, 1458
Bst4CI ACNGT 6 cut(s) 440, 873, 906, 1870, 1988, 2101
Bst6I CTCTTC 2 cut(s) 282, 332
BstAFI CTTAAG 1 cut(s) 1034
BstBI TTCGAA 1 cut(s) 652
BstC8I GCNNGC 3 cut(s) 604, 1233, 2175
BstDEI CTNAG 7 cut(s) 68, 238, 537, 803, 1700, 1883, 2072
BstDSI CCRYGG 3 cut(s) 282, 954, 1458
BstF5I GGATG 5 cut(s) 558, 781, 1138, 1639, 1861
BstH2I RGCGCY 1 cut(s) 676
BstHHI GCGC 1 cut(s) 675
BstMAI GTCTC 3 cut(s) 1129, 1220, 1236
BstMWI GCNNNNNNNGC 7 cut(s) 83, 374, 612, 712, 776, 1200, 1792
BstNSI RCATGY 1 cut(s) 1413
BstSCI CCNGG 1 cut(s) 916
BstSFI CTRYAG 3 cut(s) 750, 869, 1147
BstSLI GKGCMC 1 cut(s) 486
BstV1I GCAGC 5 cut(s) 873, 937, 1161, 1506, 1707
BstV2I GAAGAC 2 cut(s) 335, 1439
BstX2I RGATCY 4 cut(s) 133, 627, 913, 1099
BstXI CCANNNNNNTGG 1 cut(s) 212
BstYI RGATCY 4 cut(s) 133, 627, 913, 1099
BsuRI GGCC 4 cut(s) 122, 368, 1194, 1463
BtgI CCRYGG 3 cut(s) 282, 954, 1458
BtsCI GGATG 5 cut(s) 558, 781, 1138, 1639, 1861
BtsI GCAGTG 1 cut(s) 84
BtsIMutI CAGTG 3 cut(s) 84, 1124, 1188
BveI ACCTGC 3 cut(s) 1154, 1642, 2116
Cac8I GCNNGC 3 cut(s) 604, 1233, 2175
CciI TCATGA 1 cut(s) 922
CfoI GCGC 1 cut(s) 675
Cfr10I RCCGGY 1 cut(s) 587
Cfr13I GGNCC 6 cut(s) 367, 1183, 1193, 1462, 1924, 2194
CseI GACGC 3 cut(s) 83, 776, 1237
Csp6I GTAC 7 cut(s) 112, 279, 685, 874, 1078, 1175, 2084
CspCI CAANNNNNGTGG 2 cut(s) 1611, 1646
CviQI GTAC 7 cut(s) 112, 279, 685, 874, 1078, 1175, 2084
DdeI CTNAG 7 cut(s) 68, 238, 537, 803, 1700, 1883, 2072
DraIII CACNNNGTG 1 cut(s) 2174
DriI GACNNNNNGTC 1 cut(s) 1134
EaeI YGGCCR 1 cut(s) 120
Eam1104I CTCTTC 2 cut(s) 282, 332
Eam1105I GACNNNNNGTC 1 cut(s) 1134
EarI CTCTTC 2 cut(s) 282, 332
Eco130I CCWWGG 3 cut(s) 282, 954, 1458
Eco24I GRGCYC 1 cut(s) 701
Eco32I GATATC 1 cut(s) 37
Eco47I GGWCC 3 cut(s) 1183, 1924, 2194
Eco57I CTGAAG 1 cut(s) 1405
EcoRV GATATC 1 cut(s) 37
EcoT14I CCWWGG 3 cut(s) 282, 954, 1458
EcoT38I GRGCYC 1 cut(s) 701
ErhI CCWWGG 3 cut(s) 282, 954, 1458
Esp3I CGTCTC 1 cut(s) 1220
FalI AAGNNNNNCTT 6 cut(s) 659, 691, 1739, 1771, 2133, 2165
FaqI GGGAC 3 cut(s) 86, 236, 972
FauNDI CATATG 1 cut(s) 758
FbaI TGATCA 7 cut(s) 226, 634, 933, 1114, 1168, 1663, 1711
FblI GTMKAC 1 cut(s) 1406
Fnu4HI GCNGC 9 cut(s) 65, 428, 859, 862, 951, 1150, 1495, 1721, 2006
FokI GGATG 5 cut(s) 545, 788, 1125, 1646, 1868
FriOI GRGCYC 1 cut(s) 701
Fsp4HI GCNGC 9 cut(s) 65, 428, 859, 862, 951, 1150, 1495, 1721, 2006
FspBI CTAG 9 cut(s) 137, 272, 612, 830, 1103, 1232, 1239, 2048, 2135
GlaI GCGC 1 cut(s) 674
GluI GCNGC 9 cut(s) 65, 428, 859, 862, 951, 1150, 1495, 1721, 2006
GsuI CTGGAG 1 cut(s) 178
HaeII RGCGCY 1 cut(s) 676
HaeIII GGCC 4 cut(s) 122, 368, 1194, 1463
HapII CCGG 4 cut(s) 588, 773, 917, 1570
HgaI GACGC 3 cut(s) 83, 776, 1237
HhaI GCGC 1 cut(s) 675
Hin6I GCGC 1 cut(s) 673
HinP1I GCGC 1 cut(s) 673
HincII GTYRAC 2 cut(s) 312, 361
HindII GTYRAC 2 cut(s) 312, 361
HindIII AAGCTT 1 cut(s) 1211
HinfI GANTC 8 cut(s) 340, 469, 595, 1129, 1318, 1616, 1961, 2165
HpaII CCGG 4 cut(s) 588, 773, 917, 1570
HphI GGTGA 5 cut(s) 436, 629, 1531, 1706, 2070
Hpy166II GTNNAC 8 cut(s) 26, 312, 361, 484, 1186, 1407, 1924, 2078
Hpy188I TCNGA 5 cut(s) 738, 804, 997, 1087, 1884
Hpy8I GTNNAC 8 cut(s) 26, 312, 361, 484, 1186, 1407, 1924, 2078
Hpy99I CGWCG 1 cut(s) 770
HpyAV CCTTC 4 cut(s) 648, 809, 1082, 1889
HpyCH4III ACNGT 6 cut(s) 440, 873, 906, 1870, 1988, 2101
HpyCH4IV ACGT 3 cut(s) 486, 1024, 1517
HpyF10VI GCNNNNNNNGC 7 cut(s) 83, 374, 612, 712, 776, 1200, 1792
HpyF3I CTNAG 7 cut(s) 68, 238, 537, 803, 1700, 1883, 2072
HpySE526I ACGT 3 cut(s) 486, 1024, 1517
HspAI GCGC 1 cut(s) 673
Kpn2I TCCGGA 1 cut(s) 772
Ksp22I TGATCA 7 cut(s) 226, 634, 933, 1114, 1168, 1663, 1711
LmnI GCTCC 5 cut(s) 775, 815, 1572, 1800, 1895
Lsp1109I GCAGC 5 cut(s) 873, 937, 1161, 1506, 1707
LweI GCATC 6 cut(s) 364, 451, 766, 1273, 1546, 1624
MaeI CTAG 9 cut(s) 137, 272, 612, 830, 1103, 1232, 1239, 2048, 2135
MaeII ACGT 3 cut(s) 486, 1024, 1517
MaeIII GTNAC 5 cut(s) 434, 442, 880, 1003, 1453
MboII GAAGA 4 cut(s) 299, 335, 349, 1444
MflI RGATCY 4 cut(s) 133, 627, 913, 1099
MhlI GDGCHC 3 cut(s) 237, 486, 701
MlyI GAGTC 2 cut(s) 349, 1123
MmeI TCCRAC 5 cut(s) 572, 809, 921, 954, 1166
MroI TCCGGA 1 cut(s) 772
MroXI GAANNNNTTC 1 cut(s) 1092
MseI TTAA 6 cut(s) 419, 501, 510, 666, 1035, 2157
MslI CAYNNNNRTG 1 cut(s) 1944
MspA1I CMGCKG 1 cut(s) 1720
MspCI CTTAAG 1 cut(s) 1034
MspI CCGG 4 cut(s) 588, 773, 917, 1570
MspR9I CCNGG 1 cut(s) 918
Mva1269I GAATGC 2 cut(s) 526, 745
MwoI GCNNNNNNNGC 7 cut(s) 83, 374, 612, 712, 776, 1200, 1792
NciI CCSGG 1 cut(s) 918
NcoI CCATGG 3 cut(s) 282, 954, 1458
NdeI CATATG 1 cut(s) 758
NheI GCTAGC 1 cut(s) 1231
NlaIV GGNNCC 5 cut(s) 582, 1195, 1780, 1926, 2196
NmuCI GTSAC 2 cut(s) 434, 442
NspI RCATGY 1 cut(s) 1413
NspV TTCGAA 1 cut(s) 652
PagI TCATGA 1 cut(s) 922
PcsI WCGNNNNNNNCGW 1 cut(s) 360
PctI GAATGC 2 cut(s) 526, 745
PdmI GAANNNNTTC 1 cut(s) 1092
PfeI GAWTC 6 cut(s) 469, 595, 1318, 1616, 1961, 2165
PflFI GACNNNGTC 1 cut(s) 440
PflMI CCANNNNNTGG 2 cut(s) 105, 1071
PkrI GCNGC 9 cut(s) 66, 429, 860, 863, 952, 1151, 1496, 1722, 2007
PleI GAGTC 2 cut(s) 348, 1123
PpsI GAGTC 2 cut(s) 348, 1123
PspN4I GGNNCC 5 cut(s) 582, 1195, 1780, 1926, 2196
PspPI GGNCC 6 cut(s) 367, 1183, 1193, 1462, 1924, 2194
PstI CTGCAG 1 cut(s) 1151
PsuI RGATCY 4 cut(s) 133, 627, 913, 1099
PsyI GACNNNGTC 1 cut(s) 440
PvuII CAGCTG 1 cut(s) 1720
RsaI GTAC 7 cut(s) 113, 280, 686, 875, 1079, 1176, 2085
RsaNI GTAC 7 cut(s) 112, 279, 685, 874, 1078, 1175, 2084
RseI CAYNNNNRTG 1 cut(s) 1944
SaqAI TTAA 6 cut(s) 419, 501, 510, 666, 1035, 2157
SatI GCNGC 9 cut(s) 65, 428, 859, 862, 951, 1150, 1495, 1721, 2006
Sau96I GGNCC 6 cut(s) 367, 1183, 1193, 1462, 1924, 2194
ScaI AGTACT 1 cut(s) 686
SchI GAGTC 2 cut(s) 349, 1123
ScrFI CCNGG 1 cut(s) 918
SduI GDGCHC 3 cut(s) 237, 486, 701
SfaNI GCATC 6 cut(s) 364, 451, 766, 1273, 1546, 1624
SfcI CTRYAG 3 cut(s) 750, 869, 1147
SfuI TTCGAA 1 cut(s) 652
SinI GGWCC 3 cut(s) 1183, 1924, 2194
SmiMI CAYNNNNRTG 1 cut(s) 1944
SmlI CTYRAG 9 cut(s) 410, 515, 526, 623, 1034, 1445, 1505, 1547, 2087
SmoI CTYRAG 9 cut(s) 410, 515, 526, 623, 1034, 1445, 1505, 1547, 2087
SsiI CCGC 4 cut(s) 65, 427, 859, 2005
SspMI CTAG 9 cut(s) 137, 272, 612, 830, 1103, 1232, 1239, 2048, 2135
StyD4I CCNGG 1 cut(s) 916
StyI CCWWGG 3 cut(s) 282, 954, 1458
TaaI ACNGT 6 cut(s) 440, 873, 906, 1870, 1988, 2101
TaiI ACGT 3 cut(s) 489, 1027, 1520
TaqI TCGA 6 cut(s) 652, 765, 1127, 1271, 1845, 2118
TatI WGTACW 3 cut(s) 684, 1174, 2083
TauI GCSGC 4 cut(s) 67, 430, 861, 2008
TfiI GAWTC 6 cut(s) 469, 595, 1318, 1616, 1961, 2165
Tru1I TTAA 6 cut(s) 419, 501, 510, 666, 1035, 2157
Tru9I TTAA 6 cut(s) 419, 501, 510, 666, 1035, 2157
TscAI CASTG 3 cut(s) 84, 1124, 1195
TseFI GTSAC 2 cut(s) 434, 442
TseI GCWGC 5 cut(s) 861, 950, 1149, 1494, 1720
Tsp45I GTSAC 2 cut(s) 434, 442
TspDTI ATGAA 6 cut(s) 233, 569, 939, 1853, 1872, 2044
TspGWI ACGGA 2 cut(s) 297, 1392
TspRI CASTG 3 cut(s) 84, 1124, 1195
Tth111I GACNNNGTC 1 cut(s) 440
Van91I CCANNNNNTGG 2 cut(s) 105, 1071
Vha464I CTTAAG 1 cut(s) 1034
VneI GTGCAC 1 cut(s) 482
VpaK11BI GGWCC 3 cut(s) 1183, 1924, 2194
XapI RAATTY 7 cut(s) 140, 385, 546, 1693, 1860, 1914, 2060
XbaI TCTAGA 1 cut(s) 136
XceI RCATGY 1 cut(s) 1413
XcmI CCANNNNNNNNNTGG 1 cut(s) 1243
XmiI GTMKAC 1 cut(s) 1406
XmnI GAANNNNTTC 1 cut(s) 1092
XspI CTAG 9 cut(s) 137, 272, 612, 830, 1103, 1232, 1239, 2048, 2135
ZrmI AGTACT 1 cut(s) 686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.