Rh6AG050400

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000103
Physical Location & Seq
Reverse (-)
7245501 .. 7246777
1277 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG050400.1

Sequence Viewer

Length: 1059 bp
ATGAATGTGGTATCCACTAGAGATATTGATCGATGGATTACTCATCTATCAAGAAACTCGGTTAAAGAGTTGACACTTGACCTTTGGATAGAGCCTGAATACAACATTCCATTCTCTCTGTTTTCATGTCAAGGTCTTGTTCATTTGGAGTTACAGATGTGTTCGCTCAAACCTCCGTCAACATTCAAAGGGTTCAAGAGTTTGAAGAGTCTTCAACTCCTGCGTGTTGACATGGCCCAAGATGTGTTTGAAAGTTTGATTCGTTGCAGTCCTCTGCTCGAGAGGTTAACATTGCTACATTGTGACGGTGTCACCAATCTCAAAATTGATGCACCAAATCTCCAATATGTGCACGTTTTAGGTGTTTTTAATGTCATTAACCTTGAGAATGCCTCAAGTATTACTGAGGCTGAAATTTGTATGAACATCCATAATGATCAAATAGGGGTTCCTGCCAGTTGGATTCCTGCCTGCAATTCTAGCAATTTGCTCAAGATCTTTGATCACCTACCTCATATTCGAAGGCTTGAAATTAAGAGGCGCTTTTTAGAGTATTTGTCTCTGCGCGCCTTGCCAGAAAAGCTCACTAAACCATGTCAATATCTGAAGGCTCTTTCTATAGACATATGCTTCGATGATCCGGATGAAATTTCAACTGCTCTATGCTTTCTGAGAAGCTCCCCTGCTCTACAAGAACTAAAAATTTTGGTGGATCAGAGAGAGAACCTCTCAAGAGTACACTCTATTTTCGAAGAAGTGGAGTCTCCTTGTGTAAATCACAACTACAATTGCACATTTTCTCAACTGCGACTTGTGAAAATAACTGAGATCTCTGGTGTTAAAGCTGAACTAGATTTCATCAGATTTCTACTTTTAAGTTCACCTGTGCTTGACAGAATGACTGTCACGCCTCGTAGATTTCCCGAGCCTTCTTATGTGGACGGTTTTCCGAAACTAGTAAAAGAGCTACTCCAGTTTAAACGTGAATCAAAGCATGCAGAGATAATTCTCCTGGACCCATTGAAAGACGAGCTCCTTCACTTCCCCACCCGAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

352

Amino Acids

40.53

Weight (kDa)

6.27

Isoelectric Point (pI)

57.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 6 - 302 8.7e-25 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 9 - 235 7.2e-23 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 567
AccIII TCCGGA 1 cut(s) 640
AclWI GGATC 2 cut(s) 632, 720
AcsI RAATTY 4 cut(s) 414, 648, 702, 1053
AcuI CTGAAG 1 cut(s) 626
AfaI GTAC 1 cut(s) 738
AgsI TTSAA 8 cut(s) 187, 196, 205, 215, 251, 530, 654, 1024
AhlI ACTAGT 1 cut(s) 955
AjnI CCWGG 1 cut(s) 1011
AluBI AGCT 5 cut(s) 583, 678, 845, 967, 1033
AluI AGCT 5 cut(s) 583, 678, 845, 967, 1033
Alw21I GWGCWC 2 cut(s) 354, 1035
Alw26I GTCTC 2 cut(s) 564, 768
Alw44I GTGCAC 1 cut(s) 350
AlwI GGATC 2 cut(s) 632, 720
Ama87I CYCGRG 2 cut(s) 278, 923
Aor13HI TCCGGA 1 cut(s) 640
AoxI GGCC 1 cut(s) 234
ApaLI GTGCAC 1 cut(s) 350
ApoI RAATTY 4 cut(s) 414, 648, 702, 1053
ArsI GACNNNNNNTTYG 2 cut(s) 614, 646
AspLEI GCGC 3 cut(s) 543, 567, 569
AspS9I GGNCC 2 cut(s) 235, 1015
AsuHPI GGTGA 3 cut(s) 304, 497, 873
AsuII TTCGAA 2 cut(s) 520, 750
AvaI CYCGRG 2 cut(s) 278, 923
AvaII GGWCC 1 cut(s) 1015
BaeGI GKGCMC 1 cut(s) 354
BanII GRGCYC 1 cut(s) 1035
BbsI GAAGAC 1 cut(s) 203
Bbv12I GWGCWC 2 cut(s) 354, 1035
BccI CCATC 1 cut(s) 27
BciT130I CCWGG 1 cut(s) 1013
BciVI GTATCC 1 cut(s) 22
BclI TGATCA 2 cut(s) 436, 502
BcoDI GTCTC 2 cut(s) 564, 768
BcuI ACTAGT 1 cut(s) 955
BfaI CTAG 4 cut(s) 18, 480, 851, 956
BfmI CTRYAG 1 cut(s) 618
BfoI RGCGCY 1 cut(s) 544
BfuI GTATCC 1 cut(s) 22
BglII AGATCT 2 cut(s) 495, 828
Bme1390I CCNGG 1 cut(s) 1013
Bme18I GGWCC 1 cut(s) 1015
BmeT110I CYCGRG 2 cut(s) 278, 923
BmgT120I GGNCC 2 cut(s) 235, 1015
BmiI GGNNCC 2 cut(s) 450, 1017
BmrFI CCNGG 1 cut(s) 1013
BmsI GCATC 1 cut(s) 319
BpiI GAAGAC 1 cut(s) 203
BplI GAGNNNNNCTC 6 cut(s) 377, 409, 711, 743, 713, 745
BpmI CTGGAG 1 cut(s) 956
Bpu14I TTCGAA 2 cut(s) 520, 750
BpuEI CTTGAG 4 cut(s) 379, 404, 476, 715
Bsa29I ATCGAT 1 cut(s) 31
BsaBI GATNNNNATC 1 cut(s) 27
BsaWI WCCGGW 1 cut(s) 640
BsaXI ACNNNNNCTCC 2 cut(s) 324, 354
Bse1I ACTGG 2 cut(s) 456, 973
Bse3DI GCAATG 1 cut(s) 290
Bse8I GATNNNNATC 1 cut(s) 27
BseAI TCCGGA 1 cut(s) 640
BseBI CCWGG 1 cut(s) 1013
BseCI ATCGAT 1 cut(s) 31
BseGI GGATG 2 cut(s) 426, 649
BseJI GATNNNNATC 1 cut(s) 27
BseMI GCAATG 1 cut(s) 290
BseMII CTCAG 3 cut(s) 396, 662, 816
BseNI ACTGG 2 cut(s) 456, 973
BsePI GCGCGC 1 cut(s) 565
BseSI GKGCMC 1 cut(s) 354
Bsh1236I CGCG 1 cut(s) 567
BshFI GGCC 1 cut(s) 236
BshVI ATCGAT 1 cut(s) 31
BsiHKAI GWGCWC 2 cut(s) 354, 1035
BsiHKCI CYCGRG 2 cut(s) 278, 923
BsiSI CCGG 1 cut(s) 641
BsmAI GTCTC 2 cut(s) 564, 768
BsmI GAATGC 1 cut(s) 394
BsnI GGCC 1 cut(s) 236
BsoBI CYCGRG 2 cut(s) 278, 923
Bsp119I TTCGAA 2 cut(s) 520, 750
Bsp1286I GDGCHC 2 cut(s) 354, 1035
Bsp13I TCCGGA 1 cut(s) 640
Bsp143I GATC 7 cut(s) 28, 436, 495, 502, 637, 712, 828
BspANI GGCC 1 cut(s) 236
BspCNI CTCAG 3 cut(s) 397, 663, 817
BspDI ATCGAT 1 cut(s) 31
BspEI TCCGGA 1 cut(s) 640
BspFNI CGCG 1 cut(s) 567
BspLI GGNNCC 2 cut(s) 450, 1017
BspPI GGATC 2 cut(s) 632, 720
BspT104I TTCGAA 2 cut(s) 520, 750
BsrDI GCAATG 1 cut(s) 290
BsrI ACTGG 2 cut(s) 456, 973
BssHII GCGCGC 1 cut(s) 565
BssMI GATC 7 cut(s) 28, 436, 495, 502, 637, 712, 828
Bst2UI CCWGG 1 cut(s) 1013
Bst4CI ACNGT 3 cut(s) 308, 904, 944
Bst6I CTCTTC 1 cut(s) 200
BstBI TTCGAA 2 cut(s) 520, 750
BstC8I GCNNGC 3 cut(s) 472, 567, 996
BstDEI CTNAG 3 cut(s) 405, 671, 825
BstF5I GGATG 2 cut(s) 426, 649
BstFNI CGCG 1 cut(s) 567
BstH2I RGCGCY 1 cut(s) 544
BstHHI GCGC 3 cut(s) 543, 567, 569
BstKTI GATC 7 cut(s) 31, 439, 498, 505, 640, 715, 831
BstMAI GTCTC 2 cut(s) 564, 768
BstMBI GATC 7 cut(s) 28, 436, 495, 502, 637, 712, 828
BstMWI GCNNNNNNNGC 3 cut(s) 480, 571, 580
BstNI CCWGG 1 cut(s) 1013
BstNSI RCATGY 1 cut(s) 998
BstSCI CCNGG 1 cut(s) 1011
BstSFI CTRYAG 1 cut(s) 618
BstSLI GKGCMC 1 cut(s) 354
BstUI CGCG 1 cut(s) 567
BstV2I GAAGAC 1 cut(s) 203
BstX2I RGATCY 2 cut(s) 495, 828
BstYI RGATCY 2 cut(s) 495, 828
Bsu15I ATCGAT 1 cut(s) 31
BsuI GTATCC 1 cut(s) 22
BsuRI GGCC 1 cut(s) 236
BsuTUI ATCGAT 1 cut(s) 31
BtsCI GGATG 2 cut(s) 426, 649
Cac8I GCNNGC 3 cut(s) 472, 567, 996
CfoI GCGC 3 cut(s) 543, 567, 569
Cfr13I GGNCC 2 cut(s) 235, 1015
ClaI ATCGAT 1 cut(s) 31
Csp6I GTAC 1 cut(s) 737
CviAII CATG 4 cut(s) 126, 232, 594, 995
CviQI GTAC 1 cut(s) 737
DdeI CTNAG 3 cut(s) 405, 671, 825
DpnI GATC 7 cut(s) 30, 438, 497, 504, 639, 714, 830
DpnII GATC 7 cut(s) 28, 436, 495, 502, 637, 712, 828
DraI TTTAAA 1 cut(s) 979
Eam1104I CTCTTC 1 cut(s) 200
EarI CTCTTC 1 cut(s) 200
Ecl136II GAGCTC 1 cut(s) 1033
Eco24I GRGCYC 1 cut(s) 1035
Eco47I GGWCC 1 cut(s) 1015
Eco53kI GAGCTC 1 cut(s) 1033
Eco57I CTGAAG 1 cut(s) 626
Eco88I CYCGRG 2 cut(s) 278, 923
EcoICRI GAGCTC 1 cut(s) 1033
EcoRII CCWGG 1 cut(s) 1011
EcoT38I GRGCYC 1 cut(s) 1035
FaeI CATG 4 cut(s) 129, 235, 597, 998
FalI AAGNNNNNCTT 2 cut(s) 527, 559
FatI CATG 4 cut(s) 125, 231, 593, 994
FauNDI CATATG 1 cut(s) 626
FbaI TGATCA 2 cut(s) 436, 502
FokI GGATG 2 cut(s) 413, 656
FriOI GRGCYC 1 cut(s) 1035
FspBI CTAG 4 cut(s) 18, 480, 851, 956
GlaI GCGC 3 cut(s) 542, 566, 568
GsuI CTGGAG 1 cut(s) 956
HaeII RGCGCY 1 cut(s) 544
HaeIII GGCC 1 cut(s) 236
HapII CCGG 1 cut(s) 641
HhaI GCGC 3 cut(s) 543, 567, 569
Hin1II CATG 4 cut(s) 129, 235, 597, 998
Hin6I GCGC 3 cut(s) 541, 565, 567
HinP1I GCGC 3 cut(s) 541, 565, 567
HincII GTYRAC 4 cut(s) 72, 180, 229, 288
HindII GTYRAC 4 cut(s) 72, 180, 229, 288
HinfI GANTC 5 cut(s) 208, 259, 463, 761, 986
HpaI GTTAAC 1 cut(s) 288
HpaII CCGG 1 cut(s) 641
HphI GGTGA 3 cut(s) 304, 497, 873
Hpy166II GTNNAC 8 cut(s) 72, 180, 229, 288, 352, 739, 881, 940
Hpy188I TCNGA 5 cut(s) 606, 672, 717, 863, 951
Hpy188III TCNNGA 7 cut(s) 51, 196, 280, 493, 641, 732, 923
Hpy8I GTNNAC 8 cut(s) 72, 180, 229, 288, 352, 739, 881, 940
HpyAV CCTTC 4 cut(s) 516, 601, 939, 1046
HpyCH4III ACNGT 3 cut(s) 308, 904, 944
HpyCH4IV ACGT 2 cut(s) 354, 982
HpyCH4V TGCA 6 cut(s) 267, 332, 352, 474, 792, 998
HpyF10VI GCNNNNNNNGC 3 cut(s) 480, 571, 580
HpyF3I CTNAG 3 cut(s) 405, 671, 825
HpySE526I ACGT 2 cut(s) 354, 982
Hsp92II CATG 4 cut(s) 129, 235, 597, 998
HspAI GCGC 3 cut(s) 541, 565, 567
Kpn2I TCCGGA 1 cut(s) 640
Ksp22I TGATCA 2 cut(s) 436, 502
KspAI GTTAAC 1 cut(s) 288
Kzo9I GATC 7 cut(s) 28, 436, 495, 502, 637, 712, 828
LmnI GCTCC 2 cut(s) 683, 1038
LweI GCATC 1 cut(s) 319
MaeI CTAG 4 cut(s) 18, 480, 851, 956
MaeII ACGT 2 cut(s) 354, 982
MaeIII GTNAC 4 cut(s) 150, 302, 310, 904
MalI GATC 7 cut(s) 30, 438, 497, 504, 639, 714, 830
MboI GATC 7 cut(s) 28, 436, 495, 502, 637, 712, 828
MboII GAAGA 3 cut(s) 203, 217, 764
MfeI CAATTG 1 cut(s) 787
MflI RGATCY 2 cut(s) 495, 828
MhlI GDGCHC 2 cut(s) 354, 1035
MlyI GAGTC 2 cut(s) 217, 770
MmeI TCCRAC 1 cut(s) 440
MnlI CCTC 9 cut(s) 183, 276, 282, 400, 403, 522, 531, 737, 921
MroI TCCGGA 1 cut(s) 640
MseI TTAA 8 cut(s) 63, 287, 369, 378, 534, 840, 875, 978
MspI CCGG 1 cut(s) 641
MspR9I CCNGG 1 cut(s) 1013
MssI GTTTAAAC 1 cut(s) 979
MunI CAATTG 1 cut(s) 787
Mva1269I GAATGC 1 cut(s) 394
MvaI CCWGG 1 cut(s) 1013
MvnI CGCG 1 cut(s) 567
MwoI GCNNNNNNNGC 3 cut(s) 480, 571, 580
NdeI CATATG 1 cut(s) 626
NdeII GATC 7 cut(s) 28, 436, 495, 502, 637, 712, 828
NlaIII CATG 4 cut(s) 129, 235, 597, 998
NlaIV GGNNCC 2 cut(s) 450, 1017
NmuCI GTSAC 3 cut(s) 302, 310, 904
NspI RCATGY 1 cut(s) 998
NspV TTCGAA 2 cut(s) 520, 750
PaeI GCATGC 1 cut(s) 998
PaeR7I CTCGAG 1 cut(s) 278
PauI GCGCGC 1 cut(s) 565
PctI GAATGC 1 cut(s) 394
PfeI GAWTC 3 cut(s) 259, 463, 986
PflFI GACNNNGTC 1 cut(s) 308
PfoI TCCNGGA 1 cut(s) 1011
PleI GAGTC 2 cut(s) 216, 769
PmeI GTTTAAAC 1 cut(s) 979
PpsI GAGTC 2 cut(s) 216, 769
Psp124BI GAGCTC 1 cut(s) 1035
Psp6I CCWGG 1 cut(s) 1011
PspGI CCWGG 1 cut(s) 1011
PspN4I GGNNCC 2 cut(s) 450, 1017
PspPI GGNCC 2 cut(s) 235, 1015
PsuI RGATCY 2 cut(s) 495, 828
PsyI GACNNNGTC 1 cut(s) 308
PteI GCGCGC 1 cut(s) 565
RsaI GTAC 1 cut(s) 738
RsaNI GTAC 1 cut(s) 737
SacI GAGCTC 1 cut(s) 1035
SaqAI TTAA 8 cut(s) 63, 287, 369, 378, 534, 840, 875, 978
Sau3AI GATC 7 cut(s) 28, 436, 495, 502, 637, 712, 828
Sau96I GGNCC 2 cut(s) 235, 1015
SchI GAGTC 2 cut(s) 217, 770
ScrFI CCNGG 1 cut(s) 1013
SduI GDGCHC 2 cut(s) 354, 1035
SfaNI GCATC 1 cut(s) 319
SfcI CTRYAG 1 cut(s) 618
Sfr274I CTCGAG 1 cut(s) 278
SfuI TTCGAA 2 cut(s) 520, 750
SinI GGWCC 1 cut(s) 1015
SlaI CTCGAG 1 cut(s) 278
SmlI CTYRAG 5 cut(s) 278, 383, 394, 491, 730
SmoI CTYRAG 5 cut(s) 278, 383, 394, 491, 730
SpeI ACTAGT 1 cut(s) 955
SphI GCATGC 1 cut(s) 998
SspMI CTAG 4 cut(s) 18, 480, 851, 956
SstI GAGCTC 1 cut(s) 1035
StyD4I CCNGG 1 cut(s) 1011
TaaI ACNGT 3 cut(s) 308, 904, 944
TaiI ACGT 2 cut(s) 357, 985
TaqI TCGA 5 cut(s) 31, 279, 520, 633, 750
TatI WGTACW 1 cut(s) 736
TfiI GAWTC 3 cut(s) 259, 463, 986
Tru1I TTAA 8 cut(s) 63, 287, 369, 378, 534, 840, 875, 978
Tru9I TTAA 8 cut(s) 63, 287, 369, 378, 534, 840, 875, 978
TseFI GTSAC 3 cut(s) 302, 310, 904
Tsp45I GTSAC 3 cut(s) 302, 310, 904
TspDTI ATGAA 6 cut(s) 17, 114, 131, 437, 660, 847
TspGWI ACGGA 1 cut(s) 165
Tth111I GACNNNGTC 1 cut(s) 308
VneI GTGCAC 1 cut(s) 350
VpaK11BI GGWCC 1 cut(s) 1015
XapI RAATTY 4 cut(s) 414, 648, 702, 1053
XceI RCATGY 1 cut(s) 998
XhoI CTCGAG 1 cut(s) 278
XspI CTAG 4 cut(s) 18, 480, 851, 956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.