Rw6G004320

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000103
Physical Location & Seq
Reverse (-)
6919817 .. 6921308
1492 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G004320.1

Sequence Viewer

Length: 1263 bp
ATGGATAGAATTAGCAGTTTACCAAATGATGTGACAGAAAAGATTTTGTCATGTTTGCCGCTTTGGGACGCTGTGAGGACAAGTGTTTTATCCAGCAAGTGGAGGTACAAGTCGGCCATGCTTCAAGATCTAGAATTTGATGAGTTTTCCTGGCGGACGAGCCAATATCGAGAGTATGATGATGATGATTATCAAATCCACAAAACCTTTGTGAACATGATTGATCATGTGCTCTTACTTCATCTTGTCCCCATACGCAAGTTCAAGCTAGCCTGTACTGCGGATGAGGTAGCCACTAGAGATATTGATCGATGGATGACCCATCTATCAAGAAACTCTATCAAAGAGTTGATAATTAAGCTTTGGCTAGACCATCAATACAACATTCCATTCTCTGTGTTTTCATGTCAAGGTCTTGTTCACTTGGAGTTACTCGACTGTTTGCTCAAACCTCCGTCAACATTCAAAGGGTTCAAGAGCTTGAAGAGTCTTCGACTCCTTCATGTCGACATGGCCCAAGATGTGTTTGAAAATTTGATTCGTTGCAGTCCTCTGCTCGAGAGATTAACATTGCTACGTTGTGACGGTGTCACCAGTCTCAAAATTGATGCACCCAATCTCCAATATTTGCACGTTTTAGGTGAGTTTGATGTCGTTAACCTTGACAGTGCCTCAAGTATTACTGAGGCTGAAATTTGGATGGGCATTGGTAATGACGAAATAGGAGTTCCAGCCAGTTGGATTCCTGCCTGCAGTTCTAGCAATTTGCTCATGATCTTTGATCACCTACCTCATATTCGAAGACTTAAAATTAATAGGCGCTTTTTAGAGCTCACTAATCCATGTCAACATCTGAAGGCTCTTTCTATAGACATATGCTTCGATGATCCGGATGCAATTCCAACTGCTCTATGCATTCTGAGAAGCTCCCCTGCTCTACAAGAACTAGAAATTGAGGTCAAGAAACTCCCAAGGATACACTCTATTGTCGAAGAAGTGAACTCTCCTTGTGTAAATGACAACTACAATTGCACATTTTCTCAACTGCGACTTGTGAAATTAACTGATATCTCTGGTGTTAAAGCTGAACTAGATTTCATCAGATTTGTACTTTTAAGTTCACCTGTGCTTGAGAGAATGACTGTAACGCCTCGTAGATTTCCCGAGCCTTCTTATGTGGATGGTTTTCCGAAACTAGTAAAAGAGCTACTCCAGTTTAAACGTGAATCAAAGCATGCAGAGATAATTCTCCTGGACCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

420

Amino Acids

48.39

Weight (kDa)

5.84

Isoelectric Point (pI)

51.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 4 - 36 4.7e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 86 - 214 3.2e-18 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 102 - 318 4e-18 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 99
AccI GTMKAC 1 cut(s) 507
AccIII TCCGGA 1 cut(s) 889
AciI CCGC 3 cut(s) 59, 154, 281
AclWI GGATC 1 cut(s) 881
AcoI YGGCCR 1 cut(s) 114
AcsI RAATTY 3 cut(s) 134, 532, 693
AcuI CTGAAG 1 cut(s) 875
AfaI GTAC 3 cut(s) 107, 277, 1110
AfiI CCNNNNNNNGG 1 cut(s) 99
AgsI TTSAA 6 cut(s) 125, 265, 466, 475, 484, 530
AhlI ACTAGT 1 cut(s) 1195
AjnI CCWGG 2 cut(s) 149, 1251
AluBI AGCT 7 cut(s) 268, 361, 480, 832, 927, 1085, 1207
AluI AGCT 7 cut(s) 268, 361, 480, 832, 927, 1085, 1207
Alw21I GWGCWC 2 cut(s) 234, 834
Alw26I GTCTC 1 cut(s) 602
AlwI GGATC 1 cut(s) 881
Ama87I CYCGRG 2 cut(s) 557, 1163
Aor13HI TCCGGA 1 cut(s) 889
AoxI GGCC 2 cut(s) 114, 513
ApoI RAATTY 3 cut(s) 134, 532, 693
ArsI GACNNNNNNTTYG 2 cut(s) 863, 895
AseI ATTAAT 1 cut(s) 813
AspLEI GCGC 1 cut(s) 822
AspS9I GGNCC 2 cut(s) 514, 1255
AsuHPI GGTGA 4 cut(s) 583, 653, 776, 1113
AsuII TTCGAA 1 cut(s) 799
AsuNHI GCTAGC 1 cut(s) 268
AvaI CYCGRG 2 cut(s) 557, 1163
AvaII GGWCC 1 cut(s) 1255
BanII GRGCYC 1 cut(s) 834
BbsI GAAGAC 2 cut(s) 482, 808
Bbv12I GWGCWC 2 cut(s) 234, 834
BccI CCATC 5 cut(s) 306, 330, 381, 694, 1175
BciT130I CCWGG 2 cut(s) 151, 1253
BciVI GTATCC 1 cut(s) 969
BclI TGATCA 2 cut(s) 223, 781
BcoDI GTCTC 1 cut(s) 602
BcuI ACTAGT 1 cut(s) 1195
BfaI CTAG 8 cut(s) 131, 269, 297, 368, 759, 947, 1091, 1196
BfmI CTRYAG 2 cut(s) 751, 867
BfoI RGCGCY 1 cut(s) 823
BfuI GTATCC 1 cut(s) 969
BglII AGATCT 1 cut(s) 127
BisI GCNGC 1 cut(s) 59
BlsI GCNGC 1 cut(s) 60
Bme1390I CCNGG 2 cut(s) 151, 1253
Bme18I GGWCC 1 cut(s) 1255
BmeT110I CYCGRG 2 cut(s) 557, 1163
BmgT120I GGNCC 2 cut(s) 514, 1255
BmiI GGNNCC 1 cut(s) 1257
BmrFI CCNGG 2 cut(s) 151, 1253
BmsI GCATC 2 cut(s) 598, 883
BmtI GCTAGC 1 cut(s) 272
BpiI GAAGAC 2 cut(s) 482, 808
BpmI CTGGAG 1 cut(s) 1196
Bpu14I TTCGAA 1 cut(s) 799
BpuEI CTTGAG 2 cut(s) 658, 1151
Bsa29I ATCGAT 1 cut(s) 310
BsaBI GATNNNNATC 2 cut(s) 189, 306
BsaJI CCNNGG 1 cut(s) 971
BsaWI WCCGGW 1 cut(s) 889
BsaXI ACNNNNNCTCC 2 cut(s) 603, 633
Bsc4I CCNNNNNNNGG 1 cut(s) 99
Bse1I ACTGG 3 cut(s) 594, 735, 1213
Bse3DI GCAATG 1 cut(s) 569
Bse8I GATNNNNATC 2 cut(s) 189, 306
BseAI TCCGGA 1 cut(s) 889
BseBI CCWGG 2 cut(s) 151, 1253
BseCI ATCGAT 1 cut(s) 310
BseDI CCNNGG 1 cut(s) 971
BseGI GGATG 5 cut(s) 289, 321, 705, 898, 1186
BseJI GATNNNNATC 2 cut(s) 189, 306
BseLI CCNNNNNNNGG 1 cut(s) 99
BseMI GCAATG 1 cut(s) 569
BseMII CTCAG 2 cut(s) 675, 911
BseNI ACTGG 3 cut(s) 594, 735, 1213
BshFI GGCC 2 cut(s) 116, 515
BshVI ATCGAT 1 cut(s) 310
BsiHKAI GWGCWC 2 cut(s) 234, 834
BsiHKCI CYCGRG 2 cut(s) 557, 1163
BsiSI CCGG 1 cut(s) 890
BslFI GGGAC 2 cut(s) 80, 233
BslI CCNNNNNNNGG 1 cut(s) 99
BsmAI GTCTC 1 cut(s) 602
BsmFI GGGAC 2 cut(s) 80, 233
BsmI GAATGC 1 cut(s) 915
BsnI GGCC 2 cut(s) 116, 515
BsoBI CYCGRG 2 cut(s) 557, 1163
Bsp119I TTCGAA 1 cut(s) 799
Bsp1286I GDGCHC 2 cut(s) 234, 834
Bsp13I TCCGGA 1 cut(s) 889
Bsp143I GATC 6 cut(s) 127, 223, 307, 774, 781, 886
BspACI CCGC 3 cut(s) 59, 154, 281
BspANI GGCC 2 cut(s) 116, 515
BspCNI CTCAG 2 cut(s) 676, 912
BspDI ATCGAT 1 cut(s) 310
BspEI TCCGGA 1 cut(s) 889
BspHI TCATGA 1 cut(s) 771
BspLI GGNNCC 1 cut(s) 1257
BspMAI CTGCAG 1 cut(s) 755
BspOI GCTAGC 1 cut(s) 272
BspPI GGATC 1 cut(s) 881
BspT104I TTCGAA 1 cut(s) 799
BsrDI GCAATG 1 cut(s) 569
BsrI ACTGG 3 cut(s) 594, 735, 1213
BssECI CCNNGG 1 cut(s) 971
BssMI GATC 6 cut(s) 127, 223, 307, 774, 781, 886
BssT1I CCWWGG 1 cut(s) 971
Bst2UI CCWGG 2 cut(s) 151, 1253
Bst4CI ACNGT 4 cut(s) 440, 587, 668, 1144
Bst6I CTCTTC 1 cut(s) 479
BstBI TTCGAA 1 cut(s) 799
BstC8I GCNNGC 3 cut(s) 270, 751, 1236
BstDEI CTNAG 2 cut(s) 684, 920
BstF5I GGATG 5 cut(s) 289, 321, 705, 898, 1186
BstH2I RGCGCY 1 cut(s) 823
BstHHI GCGC 1 cut(s) 822
BstKTI GATC 6 cut(s) 130, 226, 310, 777, 784, 889
BstMAI GTCTC 1 cut(s) 602
BstMBI GATC 6 cut(s) 127, 223, 307, 774, 781, 886
BstMWI GCNNNNNNNGC 2 cut(s) 278, 759
BstNI CCWGG 2 cut(s) 151, 1253
BstNSI RCATGY 1 cut(s) 1238
BstSCI CCNGG 2 cut(s) 149, 1251
BstSFI CTRYAG 2 cut(s) 751, 867
BstV2I GAAGAC 2 cut(s) 482, 808
BstX2I RGATCY 1 cut(s) 127
BstXI CCANNNNNNTGG 1 cut(s) 738
BstYI RGATCY 1 cut(s) 127
Bsu15I ATCGAT 1 cut(s) 310
BsuI GTATCC 1 cut(s) 969
BsuRI GGCC 2 cut(s) 116, 515
BsuTUI ATCGAT 1 cut(s) 310
BtsCI GGATG 5 cut(s) 289, 321, 705, 898, 1186
BtsIMutI CAGTG 1 cut(s) 673
Cac8I GCNNGC 3 cut(s) 270, 751, 1236
CciI TCATGA 1 cut(s) 771
CfoI GCGC 1 cut(s) 822
Cfr13I GGNCC 2 cut(s) 514, 1255
ClaI ATCGAT 1 cut(s) 310
CseI GACGC 1 cut(s) 77
Csp6I GTAC 3 cut(s) 106, 276, 1109
CviQI GTAC 3 cut(s) 106, 276, 1109
DdeI CTNAG 2 cut(s) 684, 920
DpnI GATC 6 cut(s) 129, 225, 309, 776, 783, 888
DpnII GATC 6 cut(s) 127, 223, 307, 774, 781, 886
DraI TTTAAA 1 cut(s) 1219
EaeI YGGCCR 1 cut(s) 114
Eam1104I CTCTTC 1 cut(s) 479
EarI CTCTTC 1 cut(s) 479
EciI GGCGGA 1 cut(s) 169
Ecl136II GAGCTC 1 cut(s) 832
Eco130I CCWWGG 1 cut(s) 971
Eco24I GRGCYC 1 cut(s) 834
Eco32I GATATC 1 cut(s) 1069
Eco47I GGWCC 1 cut(s) 1255
Eco53kI GAGCTC 1 cut(s) 832
Eco57I CTGAAG 1 cut(s) 875
Eco88I CYCGRG 2 cut(s) 557, 1163
EcoICRI GAGCTC 1 cut(s) 832
EcoRII CCWGG 2 cut(s) 149, 1251
EcoRV GATATC 1 cut(s) 1069
EcoT14I CCWWGG 1 cut(s) 971
EcoT22I ATGCAT 1 cut(s) 917
EcoT38I GRGCYC 1 cut(s) 834
ErhI CCWWGG 1 cut(s) 971
FaqI GGGAC 2 cut(s) 80, 233
FauNDI CATATG 1 cut(s) 875
FbaI TGATCA 2 cut(s) 223, 781
FblI GTMKAC 1 cut(s) 507
Fnu4HI GCNGC 1 cut(s) 59
FokI GGATG 5 cut(s) 296, 328, 712, 905, 1193
FriOI GRGCYC 1 cut(s) 834
Fsp4HI GCNGC 1 cut(s) 59
FspBI CTAG 8 cut(s) 131, 269, 297, 368, 759, 947, 1091, 1196
GlaI GCGC 1 cut(s) 821
GluI GCNGC 1 cut(s) 59
GsuI CTGGAG 1 cut(s) 1196
HaeII RGCGCY 1 cut(s) 823
HaeIII GGCC 2 cut(s) 116, 515
HapII CCGG 1 cut(s) 890
HgaI GACGC 1 cut(s) 77
HhaI GCGC 1 cut(s) 822
Hin6I GCGC 1 cut(s) 820
HinP1I GCGC 1 cut(s) 820
HincII GTYRAC 4 cut(s) 459, 508, 658, 848
HindII GTYRAC 4 cut(s) 459, 508, 658, 848
HindIII AAGCTT 1 cut(s) 359
HinfI GANTC 5 cut(s) 487, 495, 538, 742, 1226
HpaI GTTAAC 1 cut(s) 658
HpaII CCGG 1 cut(s) 890
HphI GGTGA 4 cut(s) 583, 653, 776, 1113
Hpy166II GTNNAC 9 cut(s) 20, 214, 421, 459, 508, 658, 848, 1000, 1121
Hpy188I TCNGA 4 cut(s) 855, 921, 1103, 1191
Hpy8I GTNNAC 9 cut(s) 20, 214, 421, 459, 508, 658, 848, 1000, 1121
HpyAV CCTTC 3 cut(s) 509, 850, 1179
HpyCH4III ACNGT 4 cut(s) 440, 587, 668, 1144
HpyCH4IV ACGT 3 cut(s) 577, 633, 1222
HpyCH4V TGCA 8 cut(s) 546, 611, 631, 753, 896, 915, 1032, 1238
HpyF10VI GCNNNNNNNGC 2 cut(s) 278, 759
HpyF3I CTNAG 2 cut(s) 684, 920
HpySE526I ACGT 3 cut(s) 577, 633, 1222
HspAI GCGC 1 cut(s) 820
Kpn2I TCCGGA 1 cut(s) 889
Ksp22I TGATCA 2 cut(s) 223, 781
KspAI GTTAAC 1 cut(s) 658
Kzo9I GATC 6 cut(s) 127, 223, 307, 774, 781, 886
LmnI GCTCC 1 cut(s) 932
LweI GCATC 2 cut(s) 598, 883
MaeI CTAG 8 cut(s) 131, 269, 297, 368, 759, 947, 1091, 1196
MaeII ACGT 3 cut(s) 577, 633, 1222
MaeIII GTNAC 5 cut(s) 31, 429, 581, 589, 1144
MalI GATC 6 cut(s) 129, 225, 309, 776, 783, 888
MboI GATC 6 cut(s) 127, 223, 307, 774, 781, 886
MboII GAAGA 4 cut(s) 482, 496, 813, 1004
MfeI CAATTG 1 cut(s) 1027
MflI RGATCY 1 cut(s) 127
MhlI GDGCHC 2 cut(s) 234, 834
MlyI GAGTC 2 cut(s) 489, 496
MmeI TCCRAC 2 cut(s) 719, 926
Mph1103I ATGCAT 1 cut(s) 917
MroI TCCGGA 1 cut(s) 889
MseI TTAA 9 cut(s) 357, 566, 657, 807, 813, 1061, 1080, 1115, 1218
MspI CCGG 1 cut(s) 890
MspR9I CCNGG 2 cut(s) 151, 1253
MssI GTTTAAAC 1 cut(s) 1219
MunI CAATTG 1 cut(s) 1027
Mva1269I GAATGC 1 cut(s) 915
MvaI CCWGG 2 cut(s) 151, 1253
MwoI GCNNNNNNNGC 2 cut(s) 278, 759
NdeI CATATG 1 cut(s) 875
NdeII GATC 6 cut(s) 127, 223, 307, 774, 781, 886
NheI GCTAGC 1 cut(s) 268
NlaIV GGNNCC 1 cut(s) 1257
NmuCI GTSAC 3 cut(s) 31, 581, 589
NsiI ATGCAT 1 cut(s) 917
NspI RCATGY 1 cut(s) 1238
NspV TTCGAA 1 cut(s) 799
PaeI GCATGC 1 cut(s) 1238
PaeR7I CTCGAG 1 cut(s) 557
PagI TCATGA 1 cut(s) 771
PctI GAATGC 1 cut(s) 915
PfeI GAWTC 3 cut(s) 538, 742, 1226
PflFI GACNNNGTC 1 cut(s) 587
PflMI CCANNNNNTGG 1 cut(s) 99
PfoI TCCNGGA 1 cut(s) 1251
PkrI GCNGC 1 cut(s) 60
PleI GAGTC 2 cut(s) 489, 495
PmeI GTTTAAAC 1 cut(s) 1219
PpsI GAGTC 2 cut(s) 489, 495
PshBI ATTAAT 1 cut(s) 813
Psp124BI GAGCTC 1 cut(s) 834
Psp6I CCWGG 2 cut(s) 149, 1251
PspGI CCWGG 2 cut(s) 149, 1251
PspN4I GGNNCC 1 cut(s) 1257
PspPI GGNCC 2 cut(s) 514, 1255
PstI CTGCAG 1 cut(s) 755
PsuI RGATCY 1 cut(s) 127
PsyI GACNNNGTC 1 cut(s) 587
RsaI GTAC 3 cut(s) 107, 277, 1110
RsaNI GTAC 3 cut(s) 106, 276, 1109
SacI GAGCTC 1 cut(s) 834
SalI GTCGAC 1 cut(s) 506
SaqAI TTAA 9 cut(s) 357, 566, 657, 807, 813, 1061, 1080, 1115, 1218
SatI GCNGC 1 cut(s) 59
Sau3AI GATC 6 cut(s) 127, 223, 307, 774, 781, 886
Sau96I GGNCC 2 cut(s) 514, 1255
SchI GAGTC 2 cut(s) 489, 496
ScrFI CCNGG 2 cut(s) 151, 1253
SduI GDGCHC 2 cut(s) 234, 834
SfaNI GCATC 2 cut(s) 598, 883
SfcI CTRYAG 2 cut(s) 751, 867
Sfr274I CTCGAG 1 cut(s) 557
SfuI TTCGAA 1 cut(s) 799
SinI GGWCC 1 cut(s) 1255
SlaI CTCGAG 1 cut(s) 557
SmlI CTYRAG 3 cut(s) 557, 673, 1130
SmoI CTYRAG 3 cut(s) 557, 673, 1130
SpeI ACTAGT 1 cut(s) 1195
SphI GCATGC 1 cut(s) 1238
SsiI CCGC 3 cut(s) 59, 154, 281
SspI AATATT 1 cut(s) 626
SspMI CTAG 8 cut(s) 131, 269, 297, 368, 759, 947, 1091, 1196
SstI GAGCTC 1 cut(s) 834
StyD4I CCNGG 2 cut(s) 149, 1251
StyI CCWWGG 1 cut(s) 971
TaaI ACNGT 4 cut(s) 440, 587, 668, 1144
TaiI ACGT 3 cut(s) 580, 636, 1225
TaqI TCGA 9 cut(s) 169, 310, 435, 493, 507, 558, 799, 882, 990
TatI WGTACW 2 cut(s) 275, 1108
TauI GCSGC 1 cut(s) 61
TfiI GAWTC 3 cut(s) 538, 742, 1226
Tru1I TTAA 9 cut(s) 357, 566, 657, 807, 813, 1061, 1080, 1115, 1218
Tru9I TTAA 9 cut(s) 357, 566, 657, 807, 813, 1061, 1080, 1115, 1218
TscAI CASTG 1 cut(s) 673
TseFI GTSAC 3 cut(s) 31, 581, 589
Tsp45I GTSAC 3 cut(s) 31, 581, 589
TspDTI ATGAA 4 cut(s) 230, 393, 491, 1087
TspGWI ACGGA 1 cut(s) 444
TspRI CASTG 1 cut(s) 673
Tth111I GACNNNGTC 1 cut(s) 587
Van91I CCANNNNNTGG 1 cut(s) 99
VpaK11BI GGWCC 1 cut(s) 1255
VspI ATTAAT 1 cut(s) 813
XapI RAATTY 3 cut(s) 134, 532, 693
XbaI TCTAGA 1 cut(s) 130
XceI RCATGY 1 cut(s) 1238
XhoI CTCGAG 1 cut(s) 557
XmiI GTMKAC 1 cut(s) 507
XspI CTAG 8 cut(s) 131, 269, 297, 368, 759, 947, 1091, 1196
Zsp2I ATGCAT 1 cut(s) 917
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.