Rroxscaffold_3G00271110

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000103
Physical Location & Seq
Forward (+)
63524653 .. 63527109
2457 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00271110.1

Sequence Viewer

Length: 1368 bp
ATGACTATATTCAATTTGGCTATTTGTTTTGGAAGTAGAGTTATGATCTTTTTTGCTTACACACCTGCTCAAGGGCATGATCTGAATTATTTGCACACCACTGGCCAGCATATTCGATCAATGGAAGGCACTTCAAAAATGGAGGTGGAGTTGGACTCAATTAGCAACTTACCAAGAGAGATTGTTGAAAAGATTTTGGCACGTTTGCCGATTAAGGAGGCAGTGAGGACAAGTATTTTATCGACCAAGTGGAGGTACAAACCAGCCATGCTTCAAAATCTAAAGTTTGATGAGCAATGTGTATCGACTCAGAACCATATCACCTTTGCTAATATTGTTGATCAAGTACTCTTACTTCACATTGGCCCCATACACAAGTTTGAGTTTTCTCATCGGGATTTTTTAGCCAGTGCTGATATTGATAGATGGGTTCTTCATCTATCAAGAAGCTGTGTCAAATGTTTGAAACTTGTAATCTGGAAGGGGCATCGCTACAAGTTGCCTTCATGTTTCTTTTCTTGTCAAGACATAATTCATTTGCGGTTACATAATTGTATTCTAAAGCCTCCATCAACTTTCAGAGGCTTCAAGAGTTTGGAGCATCTTGACATTCGGCATGTTACGTTGGCCCAACATGTCTTTGAAGATTTTATTGTTTGTTGTCCTGTGCTTAAGAAACTGATTTTGAAATACTGTGATGGTTTCACAAATCTCTGCATTGATGCACCAAATCTCAAATTGCTTGATATAGATGGTAGTTTTGAGGATGTTAGTCTTCAGAATACCTTACATCTTGAACATGTTGACATCCGTTTGGAATTCAAAGTCAGATGGGTTGTTGGCGGTTCATCCAATTTGGTCAAGTTTTTCGTTCACCTACCTAATATTCGTGACCTTCAAATTTCAGGTTACGTTTTAAAGTATTTGGCTGTTGGTCCCTTGCTACGAAAGCTGCCTCAACCAATACTATTTCTGAATGATCTTTATATGGACGTAAACTTCACTGATCTGGAGGAGATTACAACTGCTCTATGCCTTGTAAGAAGCTCCCCTGCTCTACAAAAACTAGAGATTGTGGTCAACCATATTGATTATCATCATGTGGTGGGAGAAGTGAACTCCTGGTTTGAAAATTTAGGCGAAAACTCAGATTGTCAACTCACTGAACTTCGACGTATAGAAATTGTTGCCATCTCTGATGCCAAAGCTGAACTAGATTTTATCAAATTGCTGCTGTTAAGTTCACCTGTACTGGAGTGCATGACTCTTAAGCCTTTTTCTGTGGATGGCTCTTTGGAACTGTTAAAACAGGTGGTCCGGTTTAGGCGTGCCTCGGTTCAGGCTGAGATAATCTTCTTGGACCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

455

Amino Acids

52.26

Weight (kDa)

6.85

Isoelectric Point (pI)

44.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 54 - 85 9.7e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 132 - 240 2.1e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 140 - 358 7.7e-16 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 73
Acc36I ACCTGC 1 cut(s) 73
AciI CCGC 2 cut(s) 541, 843
AcoI YGGCCR 1 cut(s) 103
AcsI RAATTY 3 cut(s) 818, 900, 1132
AcuI CTGAAG 1 cut(s) 761
AfaI GTAC 3 cut(s) 257, 348, 1251
AfiI CCNNNNNNNGG 2 cut(s) 71, 252
AflII CTTAAG 2 cut(s) 671, 1268
AflIII ACRYGT 2 cut(s) 634, 799
AjnI CCWGG 1 cut(s) 1121
AluBI AGCT 4 cut(s) 450, 952, 1047, 1208
AluI AGCT 4 cut(s) 450, 952, 1047, 1208
AoxI GGCC 3 cut(s) 103, 364, 627
ApeKI GCWGC 2 cut(s) 952, 1231
ApoI RAATTY 3 cut(s) 818, 900, 1132
AspS9I GGNCC 5 cut(s) 365, 628, 935, 1315, 1360
AsuHPI GGTGA 3 cut(s) 313, 866, 1236
AvaII GGWCC 3 cut(s) 935, 1315, 1360
BalI TGGCCA 1 cut(s) 105
BarI GAAGNNNNNNTAC 2 cut(s) 339, 371
BbsI GAAGAC 1 cut(s) 767
BbvI GCAGC 2 cut(s) 939, 1218
BccI CCATC 7 cut(s) 420, 577, 692, 746, 825, 1199, 1280
BciT130I CCWGG 1 cut(s) 1123
BclI TGATCA 1 cut(s) 340
BfaI CTAG 2 cut(s) 1067, 1214
BfrI CTTAAG 2 cut(s) 671, 1268
BfuAI ACCTGC 1 cut(s) 73
BisI GCNGC 2 cut(s) 953, 1232
BlsI GCNGC 2 cut(s) 954, 1233
BmcAI AGTACT 1 cut(s) 348
Bme1390I CCNGG 1 cut(s) 1123
Bme18I GGWCC 3 cut(s) 935, 1315, 1360
BmgT120I GGNCC 5 cut(s) 365, 628, 935, 1315, 1360
BmiI GGNNCC 3 cut(s) 367, 937, 1362
BmrFI CCNGG 1 cut(s) 1123
BmsI GCATC 4 cut(s) 496, 610, 712, 1189
BpiI GAAGAC 1 cut(s) 767
BplI GAGNNNNNCTC 2 cut(s) 140, 172
BpmI CTGGAG 2 cut(s) 1031, 1274
BpuEI CTTGAG 1 cut(s) 54
BsaBI GATNNNNATC 1 cut(s) 1095
BsaJI CCNNGG 1 cut(s) 1332
BsaWI WCCGGW 1 cut(s) 1317
BsaXI ACNNNNNCTCC 2 cut(s) 134, 164
Bsc4I CCNNNNNNNGG 2 cut(s) 71, 252
Bse1I ACTGG 3 cut(s) 106, 408, 1257
Bse3DI GCAATG 1 cut(s) 302
Bse8I GATNNNNATC 1 cut(s) 1095
BseBI CCWGG 1 cut(s) 1123
BseDI CCNNGG 1 cut(s) 1332
BseGI GGATG 4 cut(s) 772, 807, 848, 1291
BseJI GATNNNNATC 1 cut(s) 1095
BseLI CCNNNNNNNGG 2 cut(s) 71, 252
BseMI GCAATG 1 cut(s) 302
BseMII CTCAG 3 cut(s) 323, 1161, 1335
BseNI ACTGG 3 cut(s) 106, 408, 1257
BseRI GAGGAG 1 cut(s) 1028
BseXI GCAGC 2 cut(s) 939, 1218
BshFI GGCC 3 cut(s) 105, 366, 629
BsiSI CCGG 1 cut(s) 1318
BslFI GGGAC 1 cut(s) 921
BslI CCNNNNNNNGG 2 cut(s) 71, 252
BsmFI GGGAC 1 cut(s) 921
BsnI GGCC 3 cut(s) 105, 366, 629
Bsp143I GATC 6 cut(s) 45, 79, 116, 340, 979, 1006
BspACI CCGC 2 cut(s) 541, 843
BspANI GGCC 3 cut(s) 105, 366, 629
BspCNI CTCAG 3 cut(s) 322, 1160, 1336
BspLI GGNNCC 3 cut(s) 367, 937, 1362
BspMI ACCTGC 1 cut(s) 73
BspTI CTTAAG 2 cut(s) 671, 1268
BsrDI GCAATG 1 cut(s) 302
BsrI ACTGG 3 cut(s) 106, 408, 1257
BssECI CCNNGG 1 cut(s) 1332
BssMI GATC 6 cut(s) 45, 79, 116, 340, 979, 1006
Bst2UI CCWGG 1 cut(s) 1123
Bst4CI ACNGT 2 cut(s) 695, 1302
BstAFI CTTAAG 2 cut(s) 671, 1268
BstC8I GCNNGC 2 cut(s) 107, 1329
BstDEI CTNAG 3 cut(s) 309, 1147, 1344
BstENI CCTNNNNNAGG 1 cut(s) 69
BstF5I GGATG 4 cut(s) 772, 807, 848, 1291
BstKTI GATC 6 cut(s) 48, 82, 119, 343, 982, 1009
BstMBI GATC 6 cut(s) 45, 79, 116, 340, 979, 1006
BstMWI GCNNNNNNNGC 1 cut(s) 949
BstNI CCWGG 1 cut(s) 1123
BstNSI RCATGY 3 cut(s) 620, 638, 803
BstSCI CCNGG 1 cut(s) 1121
BstV1I GCAGC 2 cut(s) 939, 1218
BstV2I GAAGAC 1 cut(s) 767
BsuRI GGCC 3 cut(s) 105, 366, 629
BtgZI GCGATG 1 cut(s) 473
BtsCI GGATG 4 cut(s) 772, 807, 848, 1291
BtsI GCAGTG 1 cut(s) 228
BtsIMutI CAGTG 5 cut(s) 99, 228, 415, 1002, 1161
BveI ACCTGC 1 cut(s) 73
Cac8I GCNNGC 2 cut(s) 107, 1329
Cfr13I GGNCC 5 cut(s) 365, 628, 935, 1315, 1360
Csp6I GTAC 3 cut(s) 256, 347, 1250
CviAII CATG 8 cut(s) 77, 268, 507, 617, 635, 800, 1100, 1261
CviQI GTAC 3 cut(s) 256, 347, 1250
DdeI CTNAG 3 cut(s) 309, 1147, 1344
DpnI GATC 6 cut(s) 47, 81, 118, 342, 981, 1008
DpnII GATC 6 cut(s) 45, 79, 116, 340, 979, 1006
DraI TTTAAA 1 cut(s) 918
EaeI YGGCCR 1 cut(s) 103
Eco47I GGWCC 3 cut(s) 935, 1315, 1360
Eco57I CTGAAG 1 cut(s) 761
EcoNI CCTNNNNNAGG 1 cut(s) 69
EcoRI GAATTC 1 cut(s) 818
EcoRII CCWGG 1 cut(s) 1121
FaeI CATG 8 cut(s) 80, 271, 510, 620, 638, 803, 1103, 1264
FaqI GGGAC 1 cut(s) 921
FatI CATG 8 cut(s) 76, 267, 506, 616, 634, 799, 1099, 1260
FbaI TGATCA 1 cut(s) 340
Fnu4HI GCNGC 2 cut(s) 953, 1232
FokI GGATG 4 cut(s) 779, 794, 835, 1298
Fsp4HI GCNGC 2 cut(s) 953, 1232
FspBI CTAG 2 cut(s) 1067, 1214
GluI GCNGC 2 cut(s) 953, 1232
GsuI CTGGAG 2 cut(s) 1031, 1274
HaeIII GGCC 3 cut(s) 105, 366, 629
HapII CCGG 1 cut(s) 1318
Hin1II CATG 8 cut(s) 80, 271, 510, 620, 638, 803, 1103, 1264
HincII GTYRAC 3 cut(s) 805, 1081, 1157
HindII GTYRAC 3 cut(s) 805, 1081, 1157
HinfI GANTC 3 cut(s) 155, 307, 1264
HpaII CCGG 1 cut(s) 1318
HphI GGTGA 3 cut(s) 313, 866, 1236
Hpy166II GTNNAC 7 cut(s) 805, 874, 997, 1081, 1117, 1157, 1244
Hpy188I TCNGA 8 cut(s) 84, 312, 581, 780, 830, 975, 1150, 1198
Hpy188III TCNNGA 9 cut(s) 395, 444, 478, 524, 589, 605, 794, 890, 1010
Hpy8I GTNNAC 7 cut(s) 805, 874, 997, 1081, 1117, 1157, 1244
Hpy99I CGWCG 1 cut(s) 1176
HpyAV CCTTC 4 cut(s) 119, 475, 513, 905
HpyCH4III ACNGT 2 cut(s) 695, 1302
HpyCH4IV ACGT 5 cut(s) 202, 623, 912, 993, 1174
HpyCH4V TGCA 4 cut(s) 94, 717, 725, 1260
HpyF10VI GCNNNNNNNGC 1 cut(s) 949
HpyF3I CTNAG 3 cut(s) 309, 1147, 1344
HpySE526I ACGT 5 cut(s) 202, 623, 912, 993, 1174
Hsp92II CATG 8 cut(s) 80, 271, 510, 620, 638, 803, 1103, 1264
Ksp22I TGATCA 1 cut(s) 340
Kzo9I GATC 6 cut(s) 45, 79, 116, 340, 979, 1006
LmnI GCTCC 2 cut(s) 598, 1052
Lsp1109I GCAGC 2 cut(s) 939, 1218
LweI GCATC 4 cut(s) 496, 610, 712, 1189
MaeI CTAG 2 cut(s) 1067, 1214
MaeII ACGT 5 cut(s) 202, 623, 912, 993, 1174
MaeIII GTNAC 4 cut(s) 543, 619, 890, 908
MalI GATC 6 cut(s) 47, 81, 118, 342, 981, 1008
MboI GATC 6 cut(s) 45, 79, 116, 340, 979, 1006
MboII GAAGA 4 cut(s) 425, 656, 767, 1345
MlsI TGGCCA 1 cut(s) 105
MluNI TGGCCA 1 cut(s) 105
MlyI GAGTC 3 cut(s) 149, 301, 1258
MmeI TCCRAC 1 cut(s) 132
Mox20I TGGCCA 1 cut(s) 105
MscI TGGCCA 1 cut(s) 105
MseI TTAA 6 cut(s) 213, 672, 917, 1238, 1269, 1304
Msp20I TGGCCA 1 cut(s) 105
MspCI CTTAAG 2 cut(s) 671, 1268
MspI CCGG 1 cut(s) 1318
MspR9I CCNGG 1 cut(s) 1123
MvaI CCWGG 1 cut(s) 1123
MwoI GCNNNNNNNGC 1 cut(s) 949
NdeII GATC 6 cut(s) 45, 79, 116, 340, 979, 1006
NlaIII CATG 8 cut(s) 80, 271, 510, 620, 638, 803, 1103, 1264
NlaIV GGNNCC 3 cut(s) 367, 937, 1362
NmuCI GTSAC 1 cut(s) 890
NspI RCATGY 3 cut(s) 620, 638, 803
PaqCI CACCTGC 1 cut(s) 73
PciI ACATGT 2 cut(s) 634, 799
PkrI GCNGC 2 cut(s) 954, 1233
PleI GAGTC 3 cut(s) 149, 301, 1258
PpsI GAGTC 3 cut(s) 149, 301, 1258
PscI ACATGT 2 cut(s) 634, 799
Psp6I CCWGG 1 cut(s) 1121
PspGI CCWGG 1 cut(s) 1121
PspN4I GGNNCC 3 cut(s) 367, 937, 1362
PspPI GGNCC 5 cut(s) 365, 628, 935, 1315, 1360
RsaI GTAC 3 cut(s) 257, 348, 1251
RsaNI GTAC 3 cut(s) 256, 347, 1250
SaqAI TTAA 6 cut(s) 213, 672, 917, 1238, 1269, 1304
SatI GCNGC 2 cut(s) 953, 1232
Sau3AI GATC 6 cut(s) 45, 79, 116, 340, 979, 1006
Sau96I GGNCC 5 cut(s) 365, 628, 935, 1315, 1360
ScaI AGTACT 1 cut(s) 348
SchI GAGTC 3 cut(s) 149, 301, 1258
ScrFI CCNGG 1 cut(s) 1123
SfaNI GCATC 4 cut(s) 496, 610, 712, 1189
SinI GGWCC 3 cut(s) 935, 1315, 1360
SmlI CTYRAG 3 cut(s) 69, 671, 1268
SmoI CTYRAG 3 cut(s) 69, 671, 1268
SsiI CCGC 2 cut(s) 541, 843
SspI AATATT 2 cut(s) 334, 886
SspMI CTAG 2 cut(s) 1067, 1214
StyD4I CCNGG 1 cut(s) 1121
TaaI ACNGT 2 cut(s) 695, 1302
TaiI ACGT 5 cut(s) 205, 626, 915, 996, 1177
TaqI TCGA 4 cut(s) 115, 242, 305, 1171
TatI WGTACW 2 cut(s) 346, 1249
Tru1I TTAA 6 cut(s) 213, 672, 917, 1238, 1269, 1304
Tru9I TTAA 6 cut(s) 213, 672, 917, 1238, 1269, 1304
TscAI CASTG 5 cut(s) 106, 228, 415, 1009, 1168
TseFI GTSAC 1 cut(s) 890
TseI GCWGC 2 cut(s) 952, 1231
Tsp45I GTSAC 1 cut(s) 890
TspDTI ATGAA 4 cut(s) 425, 495, 524, 837
TspGWI ACGGA 1 cut(s) 800
TspRI CASTG 5 cut(s) 106, 228, 415, 1009, 1168
Vha464I CTTAAG 2 cut(s) 671, 1268
VpaK11BI GGWCC 3 cut(s) 935, 1315, 1360
XagI CCTNNNNNAGG 1 cut(s) 69
XapI RAATTY 3 cut(s) 818, 900, 1132
XceI RCATGY 3 cut(s) 620, 638, 803
XspI CTAG 2 cut(s) 1067, 1214
ZrmI AGTACT 1 cut(s) 348
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.