RLG00000015128

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000103
Physical Location & Seq
Forward (+)
62103113 .. 62105038
1926 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015128

Sequence Viewer

Length: 1443 bp
ATGACGTCAGCCACCGTTCTCCCTTGGGCTGAGCTGGCAACCAGCTACCGTGTCGTTGCTAAGTGTAGTGATCGAGTTAAGGGTCTGCTGATACTGAAAGTGGAGATGGATAGAATTAGCAGTTTACCAAATGACGTCACAGAGAAGATTTTGTCATGTATGCCGCTTAGGGAGGCAGTGAGGACAAGTGTTTTATCCAGCAAGTGGAGGTACAAGTCGGCCATGCTTCAAGATCTAGAATTTGATGAGTGTGACTGGGGGGCATACCAATTTCGAGATGCTGATGACGTTGATATTGAATTGTTCAAAACCTTTGTGACCATGATTGATCATGTGCTCTTACTTCATATCGTCCCCATACGCAAGTTCAAGCTATTCTCTGCTATGAATGTGGTATCCACTAGAGATATTGATCGATGGATTACTCATCTATCAAGAAACTCAGTTAAAGAGTTGACAGTTGATCTTTGGATAGAGCCTGAATACAACATTCCATTCTCTCTGTTTTCATGTCAAGGTCTTGTTCATTTGGGGTTACAGATGTGTTCGCTCAAACCTCCGTCAACATTCAAAGGGTTCAAGAGTTTGAAGAGTCTTCAACTCCTGCGTGTTGACATGGCCCAAGATGTGTTTGAAAGTTTGATTCGTTGCAGTCCTCTGCTCGAGAGGTTAACATTGCTACATTGTGACGGTGTCACCAATCTCAAAATTGATGCACCAAATCTCCAATATGTGCACGTTTTAGGTGTTTTTAATGTCATTAACCTTGAGAATGCCTCAAGTATTACTGGGGCTGAAATTTGTATGAACATCCATAATGATCAAATAGGGATTCCTGCCAGTTGGATTCCTGCCTGCAATTCTAGCAATTTGCTCAAGATCTTTGATCACCTACCTCATATTCGAAGGCTTGAAATTAAGAGGCGCTTTTTAGAGTATTTGTCTCTGCGCGCCTTGCCAGAAAAGCTCACTAAACCATTTCAATATCTGAAGGCTCTTTCTATAGACATATGCTTCGATGATCCGGATGAAATTTCAACTGCTCTATGCCTTCTGAGAAGCTCCCCTGCTCTACAAGAACTAAACATTTTGGTGGATCAGAGCGAGAACCTCTCAAGAGTACACTCTATTTTCGAAGAAGTGGAGTCTCCTTGTGTAAATCACAACTACAATTGCACATTTTCTCAACTGCGACTTGTGAAAATAACTGAGATCTCTGGTGTTAAAGCTGAACTAGATTTCATCAGATTTCTACTTTTAGGTTCACCTGTGCTTGAGAGAATGACTGTCACGCCTCGTAGATTGCCCGAGCCTTCTTATGTGGACGGTTTTCCGAAACTAGTAAAGGAGCTACTCCAGTTTAGACGTGAATCAAAGCATGCAGAGATAATTCTCCTGGACCCATTGAAAGACGAGCTCCTTCACTTCCCCACCCGAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

481

Amino Acids

55.01

Weight (kDa)

6.25

Isoelectric Point (pI)

53.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 39 - 71 6.4e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 123 - 430 1.8e-24 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 137 - 363 2.6e-21 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 8, 138
AccB7I CCANNNNNTGG 1 cut(s) 204
AccII CGCG 1 cut(s) 951
AccIII TCCGGA 1 cut(s) 1024
AciI CCGC 1 cut(s) 164
AclWI GGATC 2 cut(s) 1016, 1104
AcoI YGGCCR 1 cut(s) 219
AcsI RAATTY 4 cut(s) 239, 798, 1032, 1437
AcuI CTGAAG 1 cut(s) 1010
AcyI GRCGYC 2 cut(s) 5, 135
AfaI GTAC 2 cut(s) 212, 1122
AfiI CCNNNNNNNGG 1 cut(s) 204
AhlI ACTAGT 1 cut(s) 1339
AjiI CACGTC 1 cut(s) 1367
AjnI CCWGG 1 cut(s) 1395
AluBI AGCT 8 cut(s) 34, 45, 373, 967, 1062, 1229, 1351, 1417
AluI AGCT 8 cut(s) 34, 45, 373, 967, 1062, 1229, 1351, 1417
Alw21I GWGCWC 3 cut(s) 339, 738, 1419
Alw26I GTCTC 2 cut(s) 948, 1152
Alw44I GTGCAC 1 cut(s) 734
AlwI GGATC 2 cut(s) 1016, 1104
Ama87I CYCGRG 2 cut(s) 662, 1307
Aor13HI TCCGGA 1 cut(s) 1024
AoxI GGCC 2 cut(s) 219, 618
ApaLI GTGCAC 1 cut(s) 734
ApoI RAATTY 4 cut(s) 239, 798, 1032, 1437
ArsI GACNNNNNNTTYG 2 cut(s) 998, 1030
AspLEI GCGC 3 cut(s) 927, 951, 953
AspS9I GGNCC 2 cut(s) 619, 1399
AsuHPI GGTGA 3 cut(s) 688, 881, 1257
AsuII TTCGAA 2 cut(s) 904, 1134
AvaI CYCGRG 2 cut(s) 662, 1307
AvaII GGWCC 1 cut(s) 1399
BaeGI GKGCMC 1 cut(s) 738
BanII GRGCYC 1 cut(s) 1419
BbsI GAAGAC 1 cut(s) 587
Bbv12I GWGCWC 3 cut(s) 339, 738, 1419
BccI CCATC 2 cut(s) 100, 411
BciT130I CCWGG 1 cut(s) 1397
BciVI GTATCC 1 cut(s) 406
BclI TGATCA 3 cut(s) 328, 820, 886
BcoDI GTCTC 2 cut(s) 948, 1152
BcuI ACTAGT 1 cut(s) 1339
BfaI CTAG 5 cut(s) 236, 402, 864, 1235, 1340
BfmI CTRYAG 1 cut(s) 1002
BfoI RGCGCY 1 cut(s) 928
BfuI GTATCC 1 cut(s) 406
BglII AGATCT 3 cut(s) 232, 879, 1212
BisI GCNGC 1 cut(s) 164
BlpI GCTNAGC 1 cut(s) 30
BlsI GCNGC 1 cut(s) 165
Bme1390I CCNGG 1 cut(s) 1397
Bme18I GGWCC 1 cut(s) 1399
BmeT110I CYCGRG 2 cut(s) 662, 1307
BmgBI CACGTC 1 cut(s) 1367
BmgT120I GGNCC 2 cut(s) 619, 1399
BmiI GGNNCC 1 cut(s) 1401
BmrFI CCNGG 1 cut(s) 1397
BmrI ACTGGG 2 cut(s) 265, 798
BmsI GCATC 2 cut(s) 268, 703
BmuI ACTGGG 2 cut(s) 265, 798
BpiI GAAGAC 1 cut(s) 587
BplI GAGNNNNNCTC 4 cut(s) 761, 793, 1097, 1129
BpmI CTGGAG 1 cut(s) 1340
Bpu10I CCTNAGC 1 cut(s) 167
Bpu1102I GCTNAGC 1 cut(s) 30
Bpu14I TTCGAA 2 cut(s) 904, 1134
BpuEI CTTGAG 5 cut(s) 763, 788, 860, 1099, 1295
Bsa29I ATCGAT 1 cut(s) 415
BsaBI GATNNNNATC 1 cut(s) 411
BsaHI GRCGYC 2 cut(s) 5, 135
BsaJI CCNNGG 1 cut(s) 23
BsaWI WCCGGW 1 cut(s) 1024
BsaXI ACNNNNNCTCC 2 cut(s) 708, 738
Bsc4I CCNNNNNNNGG 1 cut(s) 204
Bse1I ACTGG 4 cut(s) 260, 793, 840, 1357
Bse3DI GCAATG 1 cut(s) 674
Bse8I GATNNNNATC 1 cut(s) 411
BseAI TCCGGA 1 cut(s) 1024
BseBI CCWGG 1 cut(s) 1397
BseCI ATCGAT 1 cut(s) 415
BseDI CCNNGG 1 cut(s) 23
BseGI GGATG 2 cut(s) 810, 1033
BseJI GATNNNNATC 1 cut(s) 411
BseLI CCNNNNNNNGG 1 cut(s) 204
BseMI GCAATG 1 cut(s) 674
BseMII CTCAG 4 cut(s) 21, 456, 1046, 1200
BseNI ACTGG 4 cut(s) 260, 793, 840, 1357
BsePI GCGCGC 1 cut(s) 949
BseSI GKGCMC 1 cut(s) 738
Bsh1236I CGCG 1 cut(s) 951
BshFI GGCC 2 cut(s) 221, 620
BshVI ATCGAT 1 cut(s) 415
BsiHKAI GWGCWC 3 cut(s) 339, 738, 1419
BsiHKCI CYCGRG 2 cut(s) 662, 1307
BsiSI CCGG 1 cut(s) 1025
BslFI GGGAC 1 cut(s) 338
BslI CCNNNNNNNGG 1 cut(s) 204
BsmAI GTCTC 2 cut(s) 948, 1152
BsmFI GGGAC 1 cut(s) 338
BsmI GAATGC 1 cut(s) 778
BsnI GGCC 2 cut(s) 221, 620
BsoBI CYCGRG 2 cut(s) 662, 1307
Bsp119I TTCGAA 2 cut(s) 904, 1134
Bsp1286I GDGCHC 3 cut(s) 339, 738, 1419
Bsp13I TCCGGA 1 cut(s) 1024
Bsp1720I GCTNAGC 1 cut(s) 30
BspACI CCGC 1 cut(s) 164
BspANI GGCC 2 cut(s) 221, 620
BspCNI CTCAG 4 cut(s) 22, 455, 1047, 1201
BspDI ATCGAT 1 cut(s) 415
BspEI TCCGGA 1 cut(s) 1024
BspFNI CGCG 1 cut(s) 951
BspLI GGNNCC 1 cut(s) 1401
BspPI GGATC 2 cut(s) 1016, 1104
BspT104I TTCGAA 2 cut(s) 904, 1134
BsrDI GCAATG 1 cut(s) 674
BsrI ACTGG 4 cut(s) 260, 793, 840, 1357
BssECI CCNNGG 1 cut(s) 23
BssHII GCGCGC 1 cut(s) 949
BssNI GRCGYC 2 cut(s) 5, 135
BssT1I CCWWGG 1 cut(s) 23
Bst2UI CCWGG 1 cut(s) 1397
Bst4CI ACNGT 6 cut(s) 16, 50, 460, 692, 1288, 1328
Bst6I CTCTTC 1 cut(s) 584
BstACI GRCGYC 2 cut(s) 5, 135
BstBI TTCGAA 2 cut(s) 904, 1134
BstC8I GCNNGC 4 cut(s) 36, 856, 951, 1380
BstDEI CTNAG 6 cut(s) 30, 60, 167, 442, 1055, 1209
BstF5I GGATG 2 cut(s) 810, 1033
BstFNI CGCG 1 cut(s) 951
BstH2I RGCGCY 1 cut(s) 928
BstHHI GCGC 3 cut(s) 927, 951, 953
BstMAI GTCTC 2 cut(s) 948, 1152
BstMWI GCNNNNNNNGC 4 cut(s) 35, 864, 955, 964
BstNI CCWGG 1 cut(s) 1397
BstNSI RCATGY 1 cut(s) 1382
BstSCI CCNGG 1 cut(s) 1395
BstSFI CTRYAG 1 cut(s) 1002
BstSLI GKGCMC 1 cut(s) 738
BstUI CGCG 1 cut(s) 951
BstV2I GAAGAC 1 cut(s) 587
BstX2I RGATCY 3 cut(s) 232, 879, 1212
BstYI RGATCY 3 cut(s) 232, 879, 1212
Bsu15I ATCGAT 1 cut(s) 415
BsuI GTATCC 1 cut(s) 406
BsuRI GGCC 2 cut(s) 221, 620
BsuTUI ATCGAT 1 cut(s) 415
BtrI CACGTC 1 cut(s) 1367
BtsCI GGATG 2 cut(s) 810, 1033
BtsI GCAGTG 1 cut(s) 183
BtsIMutI CAGTG 1 cut(s) 183
Cac8I GCNNGC 4 cut(s) 36, 856, 951, 1380
CfoI GCGC 3 cut(s) 927, 951, 953
Cfr13I GGNCC 2 cut(s) 619, 1399
ClaI ATCGAT 1 cut(s) 415
Csp6I GTAC 2 cut(s) 211, 1121
CviAII CATG 7 cut(s) 156, 223, 322, 332, 510, 616, 1379
CviQI GTAC 2 cut(s) 211, 1121
DdeI CTNAG 6 cut(s) 30, 60, 167, 442, 1055, 1209
EaeI YGGCCR 1 cut(s) 219
Eam1104I CTCTTC 1 cut(s) 584
EarI CTCTTC 1 cut(s) 584
Ecl136II GAGCTC 1 cut(s) 1417
Eco130I CCWWGG 1 cut(s) 23
Eco24I GRGCYC 1 cut(s) 1419
Eco47I GGWCC 1 cut(s) 1399
Eco53kI GAGCTC 1 cut(s) 1417
Eco57I CTGAAG 1 cut(s) 1010
Eco88I CYCGRG 2 cut(s) 662, 1307
EcoICRI GAGCTC 1 cut(s) 1417
EcoRII CCWGG 1 cut(s) 1395
EcoT14I CCWWGG 1 cut(s) 23
EcoT38I GRGCYC 1 cut(s) 1419
ErhI CCWWGG 1 cut(s) 23
FaeI CATG 7 cut(s) 159, 226, 325, 335, 513, 619, 1382
FalI AAGNNNNNCTT 2 cut(s) 911, 943
FaqI GGGAC 1 cut(s) 338
FatI CATG 7 cut(s) 155, 222, 321, 331, 509, 615, 1378
FauNDI CATATG 1 cut(s) 1010
FbaI TGATCA 3 cut(s) 328, 820, 886
Fnu4HI GCNGC 1 cut(s) 164
FokI GGATG 2 cut(s) 797, 1040
FriOI GRGCYC 1 cut(s) 1419
Fsp4HI GCNGC 1 cut(s) 164
FspBI CTAG 5 cut(s) 236, 402, 864, 1235, 1340
GlaI GCGC 3 cut(s) 926, 950, 952
GluI GCNGC 1 cut(s) 164
GsuI CTGGAG 1 cut(s) 1340
HaeII RGCGCY 1 cut(s) 928
HaeIII GGCC 2 cut(s) 221, 620
HapII CCGG 1 cut(s) 1025
HhaI GCGC 3 cut(s) 927, 951, 953
Hin1I GRCGYC 2 cut(s) 5, 135
Hin1II CATG 7 cut(s) 159, 226, 325, 335, 513, 619, 1382
Hin6I GCGC 3 cut(s) 925, 949, 951
HinP1I GCGC 3 cut(s) 925, 949, 951
HincII GTYRAC 4 cut(s) 456, 564, 613, 672
HindII GTYRAC 4 cut(s) 456, 564, 613, 672
HinfI GANTC 6 cut(s) 592, 643, 832, 847, 1145, 1370
HpaI GTTAAC 1 cut(s) 672
HpaII CCGG 1 cut(s) 1025
HphI GGTGA 3 cut(s) 688, 881, 1257
Hpy166II GTNNAC 9 cut(s) 125, 456, 564, 613, 672, 736, 1123, 1265, 1324
Hpy188I TCNGA 5 cut(s) 990, 1056, 1101, 1247, 1335
Hpy188III TCNNGA 9 cut(s) 230, 236, 275, 435, 580, 664, 877, 1025, 1116
Hpy8I GTNNAC 9 cut(s) 125, 456, 564, 613, 672, 736, 1123, 1265, 1324
HpyAV CCTTC 5 cut(s) 900, 985, 1061, 1323, 1430
HpyCH4III ACNGT 6 cut(s) 16, 50, 460, 692, 1288, 1328
HpyCH4IV ACGT 5 cut(s) 5, 135, 288, 738, 1366
HpyCH4V TGCA 6 cut(s) 651, 716, 736, 858, 1176, 1382
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 864, 955, 964
HpyF3I CTNAG 6 cut(s) 30, 60, 167, 442, 1055, 1209
HpySE526I ACGT 5 cut(s) 5, 135, 288, 738, 1366
Hsp92I GRCGYC 2 cut(s) 5, 135
Hsp92II CATG 7 cut(s) 159, 226, 325, 335, 513, 619, 1382
HspAI GCGC 3 cut(s) 925, 949, 951
Kpn2I TCCGGA 1 cut(s) 1024
Ksp22I TGATCA 3 cut(s) 328, 820, 886
KspAI GTTAAC 1 cut(s) 672
LmnI GCTCC 3 cut(s) 1067, 1348, 1422
LweI GCATC 2 cut(s) 268, 703
MaeI CTAG 5 cut(s) 236, 402, 864, 1235, 1340
MaeII ACGT 5 cut(s) 5, 135, 288, 738, 1366
MaeIII GTNAC 7 cut(s) 136, 251, 316, 534, 686, 694, 1288
MboII GAAGA 4 cut(s) 157, 587, 601, 1148
MfeI CAATTG 1 cut(s) 1171
MflI RGATCY 3 cut(s) 232, 879, 1212
MhlI GDGCHC 3 cut(s) 339, 738, 1419
MlyI GAGTC 2 cut(s) 601, 1154
MmeI TCCRAC 1 cut(s) 824
MroI TCCGGA 1 cut(s) 1024
MseI TTAA 7 cut(s) 78, 447, 671, 753, 762, 918, 1224
MslI CAYNNNNRTG 1 cut(s) 1091
MspI CCGG 1 cut(s) 1025
MspR9I CCNGG 1 cut(s) 1397
MunI CAATTG 1 cut(s) 1171
Mva1269I GAATGC 1 cut(s) 778
MvaI CCWGG 1 cut(s) 1397
MvnI CGCG 1 cut(s) 951
MwoI GCNNNNNNNGC 4 cut(s) 35, 864, 955, 964
NdeI CATATG 1 cut(s) 1010
NlaIII CATG 7 cut(s) 159, 226, 325, 335, 513, 619, 1382
NlaIV GGNNCC 1 cut(s) 1401
NmuCI GTSAC 6 cut(s) 136, 251, 316, 686, 694, 1288
NspI RCATGY 1 cut(s) 1382
NspV TTCGAA 2 cut(s) 904, 1134
PaeI GCATGC 1 cut(s) 1382
PaeR7I CTCGAG 1 cut(s) 662
PauI GCGCGC 1 cut(s) 949
PctI GAATGC 1 cut(s) 778
PfeI GAWTC 4 cut(s) 643, 832, 847, 1370
PflFI GACNNNGTC 1 cut(s) 692
PflMI CCANNNNNTGG 1 cut(s) 204
PfoI TCCNGGA 1 cut(s) 1395
PkrI GCNGC 1 cut(s) 165
PleI GAGTC 2 cut(s) 600, 1153
PpsI GAGTC 2 cut(s) 600, 1153
Psp124BI GAGCTC 1 cut(s) 1419
Psp6I CCWGG 1 cut(s) 1395
PspGI CCWGG 1 cut(s) 1395
PspN4I GGNNCC 1 cut(s) 1401
PspPI GGNCC 2 cut(s) 619, 1399
PsuI RGATCY 3 cut(s) 232, 879, 1212
PsyI GACNNNGTC 1 cut(s) 692
PteI GCGCGC 1 cut(s) 949
RsaI GTAC 2 cut(s) 212, 1122
RsaNI GTAC 2 cut(s) 211, 1121
RseI CAYNNNNRTG 1 cut(s) 1091
SacI GAGCTC 1 cut(s) 1419
SaqAI TTAA 7 cut(s) 78, 447, 671, 753, 762, 918, 1224
SatI GCNGC 1 cut(s) 164
Sau96I GGNCC 2 cut(s) 619, 1399
SchI GAGTC 2 cut(s) 601, 1154
ScrFI CCNGG 1 cut(s) 1397
SduI GDGCHC 3 cut(s) 339, 738, 1419
SfaNI GCATC 2 cut(s) 268, 703
SfcI CTRYAG 1 cut(s) 1002
Sfr274I CTCGAG 1 cut(s) 662
SfuI TTCGAA 2 cut(s) 904, 1134
SinI GGWCC 1 cut(s) 1399
SlaI CTCGAG 1 cut(s) 662
SmiMI CAYNNNNRTG 1 cut(s) 1091
SmlI CTYRAG 6 cut(s) 662, 767, 778, 875, 1114, 1274
SmoI CTYRAG 6 cut(s) 662, 767, 778, 875, 1114, 1274
SpeI ACTAGT 1 cut(s) 1339
SphI GCATGC 1 cut(s) 1382
SsiI CCGC 1 cut(s) 164
SspMI CTAG 5 cut(s) 236, 402, 864, 1235, 1340
SstI GAGCTC 1 cut(s) 1419
StyD4I CCNGG 1 cut(s) 1395
StyI CCWWGG 1 cut(s) 23
TaaI ACNGT 6 cut(s) 16, 50, 460, 692, 1288, 1328
TaiI ACGT 5 cut(s) 8, 138, 291, 741, 1369
TaqI TCGA 7 cut(s) 73, 274, 415, 663, 904, 1017, 1134
TatI WGTACW 1 cut(s) 1120
TauI GCSGC 1 cut(s) 166
TfiI GAWTC 4 cut(s) 643, 832, 847, 1370
Tru1I TTAA 7 cut(s) 78, 447, 671, 753, 762, 918, 1224
Tru9I TTAA 7 cut(s) 78, 447, 671, 753, 762, 918, 1224
TscAI CASTG 1 cut(s) 183
TseFI GTSAC 6 cut(s) 136, 251, 316, 686, 694, 1288
Tsp45I GTSAC 6 cut(s) 136, 251, 316, 686, 694, 1288
TspDTI ATGAA 7 cut(s) 335, 401, 498, 515, 821, 1044, 1231
TspGWI ACGGA 1 cut(s) 549
TspRI CASTG 1 cut(s) 183
Tth111I GACNNNGTC 1 cut(s) 692
Van91I CCANNNNNTGG 1 cut(s) 204
VneI GTGCAC 1 cut(s) 734
VpaK11BI GGWCC 1 cut(s) 1399
XapI RAATTY 4 cut(s) 239, 798, 1032, 1437
XbaI TCTAGA 1 cut(s) 235
XceI RCATGY 1 cut(s) 1382
XhoI CTCGAG 1 cut(s) 662
XspI CTAG 5 cut(s) 236, 402, 864, 1235, 1340
ZraI GACGTC 2 cut(s) 6, 136
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.