Rw6G004340

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000103
Physical Location & Seq
Reverse (-)
6928880 .. 6931767
2888 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G004340.1

Sequence Viewer

Length: 1086 bp
ATGGAGTTGGATAGAATTAGCAGTTTACCAAATGATGTTACAGAGAAGATTTTGTCACGTTTGCCGCTTAAAGAGGCAGTAAGGACAAGTATTTTATCCACAAAGTGGAGGTACAAATCAGAAATGCTTCAAGATCTAGTGTTTGATGACCGGTGTGTCTCGACTCAAAGTCATCCAACCTGCAGCTTTGTGAATATTGTTGATCATGTATTCTTACTTCACACGGGCCCCATACGCAAGTTCAAGCTTTCTCGCAGAGATGAGCTAGCCACTCGAGACATGGACAGATGGATATTGCATCTATCGAGAAACCCTGTCATCAAAGAGATGATACTTGAGATTTGGAAAGGGAATCCCTACAGCGTTCCATCATGTTTGTTTTCTTGTCAAGATATCATTTACTTAGAGTTATACAGGTGTTTGCTAAACCGTCCGCGGTCCACATTCAAAGGCTTCAGGAGTTTGAAGACCCTTGATTTGGAGAATGTTACTATTATCCAAGATGTGTTTGAGAACTTGATTGATTGCAGTCCTCTGCTTGAGATATTGTACTTGCGAAATTGTGATGGTTTCACCAATCTCAAGATTGATGCACCGAAGCTCTGGTTTATTTACATTAAAGGCGTTTTTGAAGATGTCAACCTTGCTAAGACCTCAAATCTTGCTCAAGTTTCAATTCATTTGAATGTCAAGGTCGACCAAAGACAGGGTCCTGGTAGTTCTGGCAATTTTCTCAAGTTTTTTGATCACCAGCCTTATATTCAAAGGCTCACTATAAACAGGAACTTTTTAAAGTATTTGTTTATCGGTGCATTGCCAGAAAAGCTTCCCAAACCATGTCAATATATGAATTTTCTTTCTGTCAACATAAGCTTTGATGATTCGGATGAAATTTCAACTGTACTATGCCTTCTGAGTAGCTCCCCTGCTCTACGAGAACTAGAAATTTTGGTGGACCCTGAAAAGGGTCATGCTGCTATGGGAGAAGTGAAATCTTGTTTATATGACAACTACGATTGCACATACACTCAATTGCGGCTTGTGAAAATAACCAAGATCTCCTGTATGGTTTTTCAAAGCTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

361

Amino Acids

41.82

Weight (kDa)

7.91

Isoelectric Point (pI)

45.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 40 6.2e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 81 - 353 6.5e-15 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 95 - 316 2.7e-15 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 155
Acc36I ACCTGC 1 cut(s) 188
AccB7I CCANNNNNTGG 1 cut(s) 105
AccI GTMKAC 1 cut(s) 696
AccII CGCG 1 cut(s) 436
AciI CCGC 4 cut(s) 65, 434, 436, 1036
AcsI RAATTY 3 cut(s) 850, 891, 945
AcuI CTGAAG 1 cut(s) 439
AdeI CACNNNGTG 1 cut(s) 105
AfaI GTAC 3 cut(s) 113, 551, 903
AfiI CCNNNNNNNGG 5 cut(s) 105, 478, 706, 964, 965
AgeI ACCGGT 1 cut(s) 150
AhdI GACNNNNNGTC 1 cut(s) 168
AjnI CCWGG 1 cut(s) 712
AluBI AGCT 8 cut(s) 186, 247, 265, 601, 826, 873, 921, 1080
AluI AGCT 8 cut(s) 186, 247, 265, 601, 826, 873, 921, 1080
Alw26I GTCTC 2 cut(s) 163, 270
Ama87I CYCGRG 1 cut(s) 273
AoxI GGCC 1 cut(s) 226
ApaI GGGCCC 1 cut(s) 230
ApeKI GCWGC 2 cut(s) 183, 974
ApoI RAATTY 3 cut(s) 850, 891, 945
ArsI GACNNNNNNTTYG 4 cut(s) 460, 492, 694, 726
AsiGI ACCGGT 1 cut(s) 150
Asp700I GAANNNNTTC 2 cut(s) 126, 825
AspS9I GGNCC 5 cut(s) 226, 227, 438, 710, 955
AsuHPI GGTGA 2 cut(s) 565, 740
AsuNHI GCTAGC 1 cut(s) 265
AvaI CYCGRG 1 cut(s) 273
AvaII GGWCC 3 cut(s) 438, 710, 955
BaeGI GKGCMC 1 cut(s) 230
BanII GRGCYC 1 cut(s) 230
BarI GAAGNNNNNNTAC 4 cut(s) 201, 233, 894, 926
BbsI GAAGAC 1 cut(s) 473
BbvI GCAGC 2 cut(s) 195, 961
BccI CCATC 3 cut(s) 282, 376, 560
BciT130I CCWGG 1 cut(s) 714
BclI TGATCA 2 cut(s) 202, 745
BcoDI GTCTC 2 cut(s) 163, 270
BfaI CTAG 3 cut(s) 137, 266, 941
BfmI CTRYAG 2 cut(s) 181, 358
BfuAI ACCTGC 1 cut(s) 188
BglII AGATCT 2 cut(s) 133, 1056
BisI GCNGC 4 cut(s) 65, 184, 975, 1037
BlsI GCNGC 4 cut(s) 66, 185, 976, 1038
Bme1390I CCNGG 1 cut(s) 714
Bme18I GGWCC 3 cut(s) 438, 710, 955
BmeRI GACNNNNNGTC 1 cut(s) 168
BmeT110I CYCGRG 1 cut(s) 273
BmgT120I GGNCC 5 cut(s) 226, 227, 438, 710, 955
BmiI GGNNCC 4 cut(s) 228, 229, 711, 957
BmrFI CCNGG 1 cut(s) 714
BmsI GCATC 2 cut(s) 307, 580
BmtI GCTAGC 1 cut(s) 269
BpiI GAAGAC 1 cut(s) 473
BpuEI CTTGAG 5 cut(s) 356, 560, 566, 651, 719
BsaJI CCNNGG 1 cut(s) 434
BsaWI WCCGGW 1 cut(s) 150
Bsc4I CCNNNNNNNGG 5 cut(s) 105, 478, 706, 964, 965
Bse118I RCCGGY 1 cut(s) 150
Bse3DI GCAATG 1 cut(s) 812
BseBI CCWGG 1 cut(s) 714
BseDI CCNNGG 1 cut(s) 434
BseGI GGATG 2 cut(s) 172, 892
BseLI CCNNNNNNNGG 5 cut(s) 105, 478, 706, 964, 965
BseMI GCAATG 1 cut(s) 812
BseMII CTCAG 1 cut(s) 905
BseSI GKGCMC 1 cut(s) 230
BseXI GCAGC 2 cut(s) 195, 961
Bsh1236I CGCG 1 cut(s) 436
BshFI GGCC 1 cut(s) 228
BshTI ACCGGT 1 cut(s) 150
BsiHKCI CYCGRG 1 cut(s) 273
BsiSI CCGG 1 cut(s) 151
BslI CCNNNNNNNGG 5 cut(s) 105, 478, 706, 964, 965
BsmAI GTCTC 2 cut(s) 163, 270
BsnI GGCC 1 cut(s) 228
BsoBI CYCGRG 1 cut(s) 273
Bsp120I GGGCCC 1 cut(s) 226
Bsp1286I GDGCHC 1 cut(s) 230
Bsp143I GATC 4 cut(s) 133, 202, 745, 1056
BspACI CCGC 4 cut(s) 65, 434, 436, 1036
BspANI GGCC 1 cut(s) 228
BspCNI CTCAG 1 cut(s) 906
BspFNI CGCG 1 cut(s) 436
BspLI GGNNCC 4 cut(s) 228, 229, 711, 957
BspMAI CTGCAG 1 cut(s) 185
BspMI ACCTGC 1 cut(s) 188
BspOI GCTAGC 1 cut(s) 269
BsrDI GCAATG 1 cut(s) 812
BsrFI RCCGGY 1 cut(s) 150
BssAI RCCGGY 1 cut(s) 150
BssECI CCNNGG 1 cut(s) 434
BssMI GATC 4 cut(s) 133, 202, 745, 1056
Bst2UI CCWGG 1 cut(s) 714
Bst4CI ACNGT 2 cut(s) 431, 901
BstC8I GCNNGC 1 cut(s) 267
BstDEI CTNAG 3 cut(s) 403, 648, 914
BstDSI CCRYGG 1 cut(s) 434
BstF5I GGATG 2 cut(s) 172, 892
BstFNI CGCG 1 cut(s) 436
BstKTI GATC 4 cut(s) 136, 205, 748, 1059
BstMAI GTCTC 2 cut(s) 163, 270
BstMBI GATC 4 cut(s) 133, 202, 745, 1056
BstMWI GCNNNNNNNGC 2 cut(s) 234, 823
BstNI CCWGG 1 cut(s) 714
BstSCI CCNGG 1 cut(s) 712
BstSFI CTRYAG 2 cut(s) 181, 358
BstSLI GKGCMC 1 cut(s) 230
BstUI CGCG 1 cut(s) 436
BstV1I GCAGC 2 cut(s) 195, 961
BstV2I GAAGAC 1 cut(s) 473
BstX2I RGATCY 2 cut(s) 133, 1056
BstYI RGATCY 2 cut(s) 133, 1056
BsuRI GGCC 1 cut(s) 228
BtgI CCRYGG 1 cut(s) 434
BtsCI GGATG 2 cut(s) 172, 892
BveI ACCTGC 1 cut(s) 188
Cac8I GCNNGC 1 cut(s) 267
Cfr10I RCCGGY 1 cut(s) 150
Cfr13I GGNCC 5 cut(s) 226, 227, 438, 710, 955
Cfr42I CCGCGG 1 cut(s) 437
Csp6I GTAC 3 cut(s) 112, 550, 902
CspAI ACCGGT 1 cut(s) 150
CviAII CATG 5 cut(s) 206, 280, 372, 837, 971
CviQI GTAC 3 cut(s) 112, 550, 902
DdeI CTNAG 3 cut(s) 403, 648, 914
DpnI GATC 4 cut(s) 135, 204, 747, 1058
DpnII GATC 4 cut(s) 133, 202, 745, 1056
DraI TTTAAA 1 cut(s) 792
DraIII CACNNNGTG 1 cut(s) 105
DrdI GACNNNNNNGTC 1 cut(s) 155
DriI GACNNNNNGTC 1 cut(s) 168
DseDI GACNNNNNNGTC 1 cut(s) 155
Eam1105I GACNNNNNGTC 1 cut(s) 168
Eco24I GRGCYC 1 cut(s) 230
Eco32I GATATC 1 cut(s) 394
Eco47I GGWCC 3 cut(s) 438, 710, 955
Eco57I CTGAAG 1 cut(s) 439
Eco88I CYCGRG 1 cut(s) 273
EcoO109I RGGNCCY 2 cut(s) 227, 710
EcoRII CCWGG 1 cut(s) 712
EcoRV GATATC 1 cut(s) 394
EcoT38I GRGCYC 1 cut(s) 230
FaeI CATG 5 cut(s) 209, 283, 375, 840, 974
FatI CATG 5 cut(s) 205, 279, 371, 836, 970
FbaI TGATCA 2 cut(s) 202, 745
FblI GTMKAC 1 cut(s) 696
Fnu4HI GCNGC 4 cut(s) 65, 184, 975, 1037
FokI GGATG 2 cut(s) 159, 899
FriOI GRGCYC 1 cut(s) 230
Fsp4HI GCNGC 4 cut(s) 65, 184, 975, 1037
FspBI CTAG 3 cut(s) 137, 266, 941
GluI GCNGC 4 cut(s) 65, 184, 975, 1037
HaeIII GGCC 1 cut(s) 228
HapII CCGG 1 cut(s) 151
Hin1II CATG 5 cut(s) 209, 283, 375, 840, 974
HincII GTYRAC 3 cut(s) 640, 697, 865
HindII GTYRAC 3 cut(s) 640, 697, 865
HindIII AAGCTT 3 cut(s) 245, 824, 871
HinfI GANTC 3 cut(s) 163, 352, 881
HpaII CCGG 1 cut(s) 151
HphI GGTGA 2 cut(s) 565, 740
Hpy166II GTNNAC 6 cut(s) 26, 441, 640, 697, 865, 955
Hpy188I TCNGA 3 cut(s) 121, 886, 915
Hpy188III TCNNGA 7 cut(s) 131, 160, 275, 306, 389, 457, 583
Hpy8I GTNNAC 6 cut(s) 26, 441, 640, 697, 865, 955
HpyAV CCTTC 1 cut(s) 920
HpyCH4III ACNGT 2 cut(s) 431, 901
HpyCH4IV ACGT 1 cut(s) 58
HpyCH4V TGCA 6 cut(s) 183, 298, 528, 593, 812, 1020
HpyF10VI GCNNNNNNNGC 2 cut(s) 234, 823
HpyF3I CTNAG 3 cut(s) 403, 648, 914
HpySE526I ACGT 1 cut(s) 58
Hsp92II CATG 5 cut(s) 209, 283, 375, 840, 974
Ksp22I TGATCA 2 cut(s) 202, 745
KspI CCGCGG 1 cut(s) 437
Kzo9I GATC 4 cut(s) 133, 202, 745, 1056
LmnI GCTCC 1 cut(s) 926
Lsp1109I GCAGC 2 cut(s) 195, 961
LweI GCATC 2 cut(s) 307, 580
MaeI CTAG 3 cut(s) 137, 266, 941
MaeII ACGT 1 cut(s) 58
MaeIII GTNAC 3 cut(s) 37, 54, 487
MalI GATC 4 cut(s) 135, 204, 747, 1058
MboI GATC 4 cut(s) 133, 202, 745, 1056
MboII GAAGA 3 cut(s) 58, 478, 644
MfeI CAATTG 1 cut(s) 1031
MflI RGATCY 2 cut(s) 133, 1056
MhlI GDGCHC 1 cut(s) 230
MluCI AATT 8 cut(s) 15, 559, 675, 727, 850, 891, 945, 1031
MlyI GAGTC 1 cut(s) 157
MmeI TCCRAC 1 cut(s) 200
MnlI CCTC 4 cut(s) 67, 102, 543, 664
MroXI GAANNNNTTC 2 cut(s) 126, 825
MseI TTAA 4 cut(s) 69, 618, 791, 1084
MslI CAYNNNNRTG 1 cut(s) 684
MspA1I CMGCKG 1 cut(s) 436
MspI CCGG 1 cut(s) 151
MspR9I CCNGG 1 cut(s) 714
MunI CAATTG 1 cut(s) 1031
MvaI CCWGG 1 cut(s) 714
MvnI CGCG 1 cut(s) 436
MwoI GCNNNNNNNGC 2 cut(s) 234, 823
NdeII GATC 4 cut(s) 133, 202, 745, 1056
NheI GCTAGC 1 cut(s) 265
NlaIII CATG 5 cut(s) 209, 283, 375, 840, 974
NlaIV GGNNCC 4 cut(s) 228, 229, 711, 957
NmuCI GTSAC 1 cut(s) 54
PaeR7I CTCGAG 1 cut(s) 273
PdmI GAANNNNTTC 2 cut(s) 126, 825
PfeI GAWTC 2 cut(s) 352, 881
PflFI GACNNNGTC 1 cut(s) 708
PflMI CCANNNNNTGG 1 cut(s) 105
PinAI ACCGGT 1 cut(s) 150
PkrI GCNGC 4 cut(s) 66, 185, 976, 1038
PleI GAGTC 1 cut(s) 157
PpsI GAGTC 1 cut(s) 157
PpuMI RGGWCCY 1 cut(s) 710
Psp5II RGGWCCY 1 cut(s) 710
Psp6I CCWGG 1 cut(s) 712
PspGI CCWGG 1 cut(s) 712
PspN4I GGNNCC 4 cut(s) 228, 229, 711, 957
PspOMI GGGCCC 1 cut(s) 226
PspPI GGNCC 5 cut(s) 226, 227, 438, 710, 955
PspPPI RGGWCCY 1 cut(s) 710
PstI CTGCAG 1 cut(s) 185
PsuI RGATCY 2 cut(s) 133, 1056
PsyI GACNNNGTC 1 cut(s) 708
RsaI GTAC 3 cut(s) 113, 551, 903
RsaNI GTAC 3 cut(s) 112, 550, 902
RseI CAYNNNNRTG 1 cut(s) 684
SacII CCGCGG 1 cut(s) 437
SalI GTCGAC 1 cut(s) 695
SaqAI TTAA 4 cut(s) 69, 618, 791, 1084
SatI GCNGC 4 cut(s) 65, 184, 975, 1037
Sau3AI GATC 4 cut(s) 133, 202, 745, 1056
Sau96I GGNCC 5 cut(s) 226, 227, 438, 710, 955
SchI GAGTC 1 cut(s) 157
ScrFI CCNGG 1 cut(s) 714
SduI GDGCHC 1 cut(s) 230
SfaNI GCATC 2 cut(s) 307, 580
SfcI CTRYAG 2 cut(s) 181, 358
Sfr274I CTCGAG 1 cut(s) 273
Sfr303I CCGCGG 1 cut(s) 437
SgrBI CCGCGG 1 cut(s) 437
SinI GGWCC 3 cut(s) 438, 710, 955
SlaI CTCGAG 1 cut(s) 273
SmiMI CAYNNNNRTG 1 cut(s) 684
SmlI CTYRAG 6 cut(s) 273, 335, 539, 581, 666, 734
SmoI CTYRAG 6 cut(s) 273, 335, 539, 581, 666, 734
Sse9I AATT 8 cut(s) 15, 559, 675, 727, 850, 891, 945, 1031
SsiI CCGC 4 cut(s) 65, 434, 436, 1036
SspI AATATT 1 cut(s) 196
SspMI CTAG 3 cut(s) 137, 266, 941
StyD4I CCNGG 1 cut(s) 712
TaaI ACNGT 2 cut(s) 431, 901
TaiI ACGT 1 cut(s) 61
TaqI TCGA 4 cut(s) 161, 274, 305, 696
TasI AATT 8 cut(s) 15, 559, 675, 727, 850, 891, 945, 1031
TatI WGTACW 2 cut(s) 549, 901
TauI GCSGC 2 cut(s) 67, 1039
TfiI GAWTC 2 cut(s) 352, 881
Tru1I TTAA 4 cut(s) 69, 618, 791, 1084
Tru9I TTAA 4 cut(s) 69, 618, 791, 1084
TseFI GTSAC 1 cut(s) 54
TseI GCWGC 2 cut(s) 183, 974
Tsp45I GTSAC 1 cut(s) 54
TspDTI ATGAA 3 cut(s) 668, 863, 903
Tth111I GACNNNGTC 1 cut(s) 708
Van91I CCANNNNNTGG 1 cut(s) 105
VpaK11BI GGWCC 3 cut(s) 438, 710, 955
XapI RAATTY 3 cut(s) 850, 891, 945
XcmI CCANNNNNNNNNTGG 1 cut(s) 277
XhoI CTCGAG 1 cut(s) 273
XmiI GTMKAC 1 cut(s) 696
XmnI GAANNNNTTC 2 cut(s) 126, 825
XspI CTAG 3 cut(s) 137, 266, 941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.