MD00G1039500.v1.1

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0000103
Physical Location & Seq
Reverse (-)
6770869 .. 6773281
2413 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1039500.v1.1.491

Sequence Viewer

Length: 1269 bp
ATGAAGCAAAGACAAACCCCCAAGTCCCTCTCCAAAACTATGGAGATGGATTTGGATAGAATTAGCAACCTACCGTGTCATGTTATAGATCAAATTTTGTCACATTTGCCGATTAGGGAGGCTGTGCGAACAAGTGTTTTGTCGACCAAGTGGAGGTACAGATATGCTAGGCTTCCACAGCTTGTGTTTGATAACCACTGTTTCTCGCCTCAAAACCAATCAACCTTCGTCAACATTGTTGATCATGTGCTTTTACTTCACATTGGCCCCGTACACAAGTTCAAGCTGTCAAAGAGGGACTTTCTGGCCACTGCTGATATTGATCGCTGGATTCTTCATCTGTCAAGAAGCTCAATCAAAGAGTTCATACTTGAAATTTGGAAAGGGCAGCGCTACAAGATGCCCTCATGCTTGTTTTCTTGCCAGGATATGATTCATTTAGAGTTGTTCAATTGTTTGCTTAAACCTCCATCGACATTCAAAGGCTTCAGGAGTTTGAAGAGCCTTGACCTTCAGCATGTTACCCTGGCCCAAGACGTCTTTGAAAATATGGTTCTTCGCTGTCCTCTGCTTGAGAAGTTGACTGTGATGAACTTTGACGGTTTCTCCCATCTCAACATTGATGCGCCAAATCTCCAATTCTTTGACGTTGGAGGTAAATTTGAGGATGTTAATTTCAAGAATACCTCAAATCTTGCTGTAGTGTCCATTGGTTTGTATGAACATGTTGGCAACTCCTTTAGACGGCTTCCTAGCAGTTCTAGCAATCTGCTCAAGTTTTTTGCTCACCTTCCTGGTATCCAGAGACTTGAAATTCAGAGTTACTTTTTAAAGTATTTGGCTATTGGTCCCTTGCTAGGAAAGCTGCCTAAACCATGTCCAGTTCTGAACTATCTTTCTCTACGGATAAGCTTTAACGATTTGGACGAGGTCTTGACTGCTGTATGCATTTTGAAAAGCTCTCCCGCACTACAAGAAGTAGAAATTTTGGTCCGCCCAGAGGACATTGCTGTTGTGGGAACAGTTGACCTTCAGTTAGATGTAAACTGGAAATGCCCAGTCACCCAACTGCGACTTGTGAAAATCAACGGCATCTCAGGTACCAAACCGGAACTAGAATTCATCAGATTTCTACTTTTGAGTTCACCTGTGCTCGAGAGGATGACTGTGAAGCCTGCATCCGTCAACTGTGATTGGGAGATAGTTAAAGCTTTGCTTCTGTTTAGGCGTGCCTCGGTGCAGGCAGAGATTGTCTACGAGGACCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

423

Amino Acids

48.32

Weight (kDa)

8.81

Isoelectric Point (pI)

47.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 21 - 52 4.4e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 92 - 391 1.4e-12 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 107 - 328 8.1e-18 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 351 - 389 1.4e-06 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 540
Acc65I GGTACC 1 cut(s) 1100
AccB1I GGYRCC 1 cut(s) 1100
AccI GTMKAC 2 cut(s) 143, 1254
AciI CCGC 2 cut(s) 966, 994
AcoI YGGCCR 1 cut(s) 306
AcsI RAATTY 6 cut(s) 93, 375, 659, 813, 984, 1118
AcuI CTGAAG 3 cut(s) 472, 497, 1016
AcyI GRCGYC 1 cut(s) 537
AfaI GTAC 3 cut(s) 158, 273, 1102
AfeI AGCGCT 1 cut(s) 392
AfiI CCNNNNNNNGG 4 cut(s) 153, 744, 857, 1000
AflIII ACRYGT 1 cut(s) 724
AgsI TTSAA 9 cut(s) 283, 374, 451, 481, 499, 545, 679, 812, 955
AjnI CCWGG 3 cut(s) 423, 525, 793
AluBI AGCT 7 cut(s) 181, 286, 351, 865, 912, 960, 1211
AluI AGCT 7 cut(s) 181, 286, 351, 865, 912, 960, 1211
Alw21I GWGCWC 1 cut(s) 1155
Alw26I GTCTC 1 cut(s) 799
Ama87I CYCGRG 1 cut(s) 1154
Aor51HI AGCGCT 1 cut(s) 392
AoxI GGCC 3 cut(s) 265, 306, 528
ApeKI GCWGC 2 cut(s) 388, 865
ApoI RAATTY 6 cut(s) 93, 375, 659, 813, 984, 1118
Asp718I GGTACC 1 cut(s) 1100
AspLEI GCGC 2 cut(s) 393, 628
AspS9I GGNCC 5 cut(s) 266, 529, 848, 991, 1261
AsuHPI GGTGA 3 cut(s) 779, 1054, 1137
AvaI CYCGRG 1 cut(s) 1154
AvaII GGWCC 3 cut(s) 848, 991, 1261
BalI TGGCCA 1 cut(s) 308
BanI GGYRCC 1 cut(s) 1100
Bbv12I GWGCWC 1 cut(s) 1155
BbvI GCAGC 2 cut(s) 400, 852
BccI CCATC 3 cut(s) 40, 478, 618
BceAI ACGGC 2 cut(s) 761, 1105
BciT130I CCWGG 3 cut(s) 425, 527, 795
BciVI GTATCC 1 cut(s) 809
BclI TGATCA 1 cut(s) 241
BcoDI GTCTC 1 cut(s) 799
BfaI CTAG 5 cut(s) 168, 753, 762, 857, 1115
BfmI CTRYAG 1 cut(s) 699
BfoI RGCGCY 1 cut(s) 394
BfuI GTATCC 1 cut(s) 809
BisI GCNGC 2 cut(s) 389, 866
BlsI GCNGC 2 cut(s) 390, 867
Bme1390I CCNGG 3 cut(s) 425, 527, 795
Bme18I GGWCC 3 cut(s) 848, 991, 1261
BmeT110I CYCGRG 1 cut(s) 1154
BmgT120I GGNCC 5 cut(s) 266, 529, 848, 991, 1261
BmiI GGNNCC 4 cut(s) 268, 850, 1102, 1263
BmrFI CCNGG 3 cut(s) 425, 527, 795
BmrI ACTGGG 1 cut(s) 1052
BmsI GCATC 4 cut(s) 390, 613, 1101, 1187
BmuI ACTGGG 1 cut(s) 1052
BpuEI CTTGAG 2 cut(s) 593, 758
BsaBI GATNNNNATC 1 cut(s) 321
BsaHI GRCGYC 1 cut(s) 537
BsaJI CCNNGG 2 cut(s) 525, 1233
BsaWI WCCGGW 1 cut(s) 1108
BsaXI ACNNNNNCTCC 2 cut(s) 590, 620
Bsc4I CCNNNNNNNGG 4 cut(s) 153, 744, 857, 1000
Bse1I ACTGG 3 cut(s) 881, 1052, 1058
Bse3DI GCAATG 1 cut(s) 1005
Bse8I GATNNNNATC 1 cut(s) 321
BseBI CCWGG 3 cut(s) 425, 527, 795
BseDI CCNNGG 2 cut(s) 525, 1233
BseGI GGATG 3 cut(s) 673, 1167, 1178
BseJI GATNNNNATC 1 cut(s) 321
BseLI CCNNNNNNNGG 4 cut(s) 153, 744, 857, 1000
BseMI GCAATG 1 cut(s) 1005
BseMII CTCAG 1 cut(s) 1110
BseNI ACTGG 3 cut(s) 881, 1052, 1058
BseXI GCAGC 2 cut(s) 400, 852
BsgI GTGCAG 1 cut(s) 1259
BshFI GGCC 3 cut(s) 267, 308, 530
BshNI GGYRCC 1 cut(s) 1100
BsiHKAI GWGCWC 1 cut(s) 1155
BsiHKCI CYCGRG 1 cut(s) 1154
BsiSI CCGG 1 cut(s) 1109
BslFI GGGAC 3 cut(s) 10, 311, 834
BslI CCNNNNNNNGG 4 cut(s) 153, 744, 857, 1000
BsmAI GTCTC 1 cut(s) 799
BsmFI GGGAC 3 cut(s) 10, 311, 834
BsnI GGCC 3 cut(s) 267, 308, 530
BsoBI CYCGRG 1 cut(s) 1154
Bsp1286I GDGCHC 1 cut(s) 1155
Bsp143I GATC 3 cut(s) 88, 241, 322
BspACI CCGC 2 cut(s) 966, 994
BspANI GGCC 3 cut(s) 267, 308, 530
BspCNI CTCAG 1 cut(s) 1109
BspLI GGNNCC 4 cut(s) 268, 850, 1102, 1263
BspQI GCTCTTC 1 cut(s) 494
BspT107I GGYRCC 1 cut(s) 1100
BsrDI GCAATG 1 cut(s) 1005
BsrI ACTGG 3 cut(s) 881, 1052, 1058
BssECI CCNNGG 2 cut(s) 525, 1233
BssMI GATC 3 cut(s) 88, 241, 322
BssNI GRCGYC 1 cut(s) 537
Bst2UI CCWGG 3 cut(s) 425, 527, 795
Bst4CI ACNGT 7 cut(s) 75, 200, 586, 602, 1024, 1168, 1190
Bst6I CTCTTC 1 cut(s) 494
BstACI GRCGYC 1 cut(s) 537
BstC8I GCNNGC 3 cut(s) 1176, 1230, 1242
BstDEI CTNAG 1 cut(s) 1096
BstF5I GGATG 3 cut(s) 673, 1167, 1178
BstH2I RGCGCY 1 cut(s) 394
BstHHI GCGC 2 cut(s) 393, 628
BstKTI GATC 3 cut(s) 91, 244, 325
BstMAI GTCTC 1 cut(s) 799
BstMBI GATC 3 cut(s) 88, 241, 322
BstMWI GCNNNNNNNGC 3 cut(s) 178, 762, 862
BstNI CCWGG 3 cut(s) 425, 527, 795
BstNSI RCATGY 2 cut(s) 521, 728
BstSCI CCNGG 3 cut(s) 423, 525, 793
BstSFI CTRYAG 1 cut(s) 699
BstV1I GCAGC 2 cut(s) 400, 852
BstXI CCANNNNNNTGG 1 cut(s) 40
BsuI GTATCC 1 cut(s) 809
BsuRI GGCC 3 cut(s) 267, 308, 530
BtsCI GGATG 3 cut(s) 673, 1167, 1178
BtsI GCAGTG 1 cut(s) 309
BtsIMutI CAGTG 2 cut(s) 196, 309
Cac8I GCNNGC 3 cut(s) 1176, 1230, 1242
CfoI GCGC 2 cut(s) 393, 628
Cfr13I GGNCC 5 cut(s) 266, 529, 848, 991, 1261
Csp6I GTAC 3 cut(s) 157, 272, 1101
CviAII CATG 7 cut(s) 80, 245, 408, 518, 725, 876, 1266
CviQI GTAC 3 cut(s) 157, 272, 1101
DdeI CTNAG 1 cut(s) 1096
DpnI GATC 3 cut(s) 90, 243, 324
DpnII GATC 3 cut(s) 88, 241, 322
DraI TTTAAA 1 cut(s) 831
EaeI YGGCCR 1 cut(s) 306
Eam1104I CTCTTC 1 cut(s) 494
EarI CTCTTC 1 cut(s) 494
EciI GGCGGA 1 cut(s) 983
Eco47I GGWCC 3 cut(s) 848, 991, 1261
Eco47III AGCGCT 1 cut(s) 392
Eco57I CTGAAG 3 cut(s) 472, 497, 1016
Eco88I CYCGRG 1 cut(s) 1154
EcoO109I RGGNCCY 1 cut(s) 1261
EcoRI GAATTC 1 cut(s) 1118
EcoRII CCWGG 3 cut(s) 423, 525, 793
EcoT22I ATGCAT 1 cut(s) 950
FaeI CATG 7 cut(s) 83, 248, 411, 521, 728, 879, 1269
FalI AAGNNNNNCTT 4 cut(s) 284, 316, 1200, 1232
FaqI GGGAC 3 cut(s) 10, 311, 834
FatI CATG 7 cut(s) 79, 244, 407, 517, 724, 875, 1265
FauI CCCGC 1 cut(s) 973
FbaI TGATCA 1 cut(s) 241
FblI GTMKAC 2 cut(s) 143, 1254
Fnu4HI GCNGC 2 cut(s) 389, 866
FokI GGATG 3 cut(s) 680, 1165, 1174
Fsp4HI GCNGC 2 cut(s) 389, 866
FspBI CTAG 5 cut(s) 168, 753, 762, 857, 1115
GlaI GCGC 2 cut(s) 392, 627
GluI GCNGC 2 cut(s) 389, 866
HaeII RGCGCY 1 cut(s) 394
HaeIII GGCC 3 cut(s) 267, 308, 530
HapII CCGG 1 cut(s) 1109
HhaI GCGC 2 cut(s) 393, 628
Hin1I GRCGYC 1 cut(s) 537
Hin1II CATG 7 cut(s) 83, 248, 411, 521, 728, 879, 1269
Hin6I GCGC 2 cut(s) 391, 626
HinP1I GCGC 2 cut(s) 391, 626
HincII GTYRAC 5 cut(s) 144, 232, 582, 1027, 1186
HindII GTYRAC 5 cut(s) 144, 232, 582, 1027, 1186
HindIII AAGCTT 2 cut(s) 910, 1209
HinfI GANTC 2 cut(s) 331, 433
HpaII CCGG 1 cut(s) 1109
HphI GGTGA 3 cut(s) 779, 1054, 1137
Hpy166II GTNNAC 9 cut(s) 144, 232, 274, 582, 1027, 1045, 1145, 1186, 1255
Hpy188I TCNGA 3 cut(s) 819, 888, 1127
Hpy188III TCNNGA 6 cut(s) 345, 490, 679, 802, 934, 1156
Hpy8I GTNNAC 9 cut(s) 144, 232, 274, 582, 1027, 1045, 1145, 1186, 1255
HpyAV CCTTC 4 cut(s) 235, 521, 800, 1040
HpyCH4III ACNGT 7 cut(s) 75, 200, 586, 602, 1024, 1168, 1190
HpyCH4IV ACGT 2 cut(s) 537, 648
HpyCH4V TGCA 3 cut(s) 948, 1178, 1240
HpyF10VI GCNNNNNNNGC 3 cut(s) 178, 762, 862
HpyF3I CTNAG 1 cut(s) 1096
HpySE526I ACGT 2 cut(s) 537, 648
Hsp92I GRCGYC 1 cut(s) 537
Hsp92II CATG 7 cut(s) 83, 248, 411, 521, 728, 879, 1269
HspAI GCGC 2 cut(s) 391, 626
KpnI GGTACC 1 cut(s) 1104
Ksp22I TGATCA 1 cut(s) 241
Kzo9I GATC 3 cut(s) 88, 241, 322
LguI GCTCTTC 1 cut(s) 494
Lsp1109I GCAGC 2 cut(s) 400, 852
LweI GCATC 4 cut(s) 390, 613, 1101, 1187
MaeI CTAG 5 cut(s) 168, 753, 762, 857, 1115
MaeII ACGT 2 cut(s) 537, 648
MaeIII GTNAC 4 cut(s) 99, 520, 821, 1060
MalI GATC 3 cut(s) 90, 243, 324
MboI GATC 3 cut(s) 88, 241, 322
MboII GAAGA 3 cut(s) 326, 511, 548
MfeI CAATTG 1 cut(s) 451
MhlI GDGCHC 1 cut(s) 1155
MlsI TGGCCA 1 cut(s) 308
MluNI TGGCCA 1 cut(s) 308
MmeI TCCRAC 1 cut(s) 631
Mox20I TGGCCA 1 cut(s) 308
Mph1103I ATGCAT 1 cut(s) 950
MscI TGGCCA 1 cut(s) 308
MseI TTAA 5 cut(s) 462, 672, 830, 915, 1206
Msp20I TGGCCA 1 cut(s) 308
MspI CCGG 1 cut(s) 1109
MspR9I CCNGG 3 cut(s) 425, 527, 795
MunI CAATTG 1 cut(s) 451
MvaI CCWGG 3 cut(s) 425, 527, 795
MwoI GCNNNNNNNGC 3 cut(s) 178, 762, 862
NdeII GATC 3 cut(s) 88, 241, 322
NlaIII CATG 7 cut(s) 83, 248, 411, 521, 728, 879, 1269
NlaIV GGNNCC 4 cut(s) 268, 850, 1102, 1263
NmuCI GTSAC 2 cut(s) 99, 1060
NsiI ATGCAT 1 cut(s) 950
NspI RCATGY 2 cut(s) 521, 728
PaeR7I CTCGAG 1 cut(s) 1154
PciI ACATGT 1 cut(s) 724
PciSI GCTCTTC 1 cut(s) 494
PcsI WCGNNNNNNNCGW 1 cut(s) 924
PfeI GAWTC 2 cut(s) 331, 433
PflFI GACNNNGTC 1 cut(s) 929
PkrI GCNGC 2 cut(s) 390, 867
PpuMI RGGWCCY 1 cut(s) 1261
PscI ACATGT 1 cut(s) 724
Psp5II RGGWCCY 1 cut(s) 1261
Psp6I CCWGG 3 cut(s) 423, 525, 793
PspGI CCWGG 3 cut(s) 423, 525, 793
PspN4I GGNNCC 4 cut(s) 268, 850, 1102, 1263
PspPI GGNCC 5 cut(s) 266, 529, 848, 991, 1261
PspPPI RGGWCCY 1 cut(s) 1261
PsyI GACNNNGTC 1 cut(s) 929
RsaI GTAC 3 cut(s) 158, 273, 1102
RsaNI GTAC 3 cut(s) 157, 272, 1101
SalI GTCGAC 1 cut(s) 142
SapI GCTCTTC 1 cut(s) 494
SaqAI TTAA 5 cut(s) 462, 672, 830, 915, 1206
SatI GCNGC 2 cut(s) 389, 866
Sau3AI GATC 3 cut(s) 88, 241, 322
Sau96I GGNCC 5 cut(s) 266, 529, 848, 991, 1261
ScrFI CCNGG 3 cut(s) 425, 527, 795
SduI GDGCHC 1 cut(s) 1155
SfaNI GCATC 4 cut(s) 390, 613, 1101, 1187
SfcI CTRYAG 1 cut(s) 699
Sfr274I CTCGAG 1 cut(s) 1154
SinI GGWCC 3 cut(s) 848, 991, 1261
SlaI CTCGAG 1 cut(s) 1154
SmlI CTYRAG 3 cut(s) 572, 773, 1154
SmoI CTYRAG 3 cut(s) 572, 773, 1154
SsiI CCGC 2 cut(s) 966, 994
SspMI CTAG 5 cut(s) 168, 753, 762, 857, 1115
StyD4I CCNGG 3 cut(s) 423, 525, 793
TaaI ACNGT 7 cut(s) 75, 200, 586, 602, 1024, 1168, 1190
TaiI ACGT 2 cut(s) 540, 651
TaqI TCGA 3 cut(s) 143, 473, 1155
TfiI GAWTC 2 cut(s) 331, 433
Tru1I TTAA 5 cut(s) 462, 672, 830, 915, 1206
Tru9I TTAA 5 cut(s) 462, 672, 830, 915, 1206
TscAI CASTG 2 cut(s) 203, 316
TseFI GTSAC 2 cut(s) 99, 1060
TseI GCWGC 2 cut(s) 388, 865
Tsp45I GTSAC 2 cut(s) 99, 1060
TspDTI ATGAA 7 cut(s) 17, 326, 355, 425, 605, 735, 1111
TspGWI ACGGA 2 cut(s) 919, 1171
TspRI CASTG 2 cut(s) 203, 316
Tth111I GACNNNGTC 1 cut(s) 929
VpaK11BI GGWCC 3 cut(s) 848, 991, 1261
XapI RAATTY 6 cut(s) 93, 375, 659, 813, 984, 1118
XceI RCATGY 2 cut(s) 521, 728
XhoI CTCGAG 1 cut(s) 1154
XmiI GTMKAC 2 cut(s) 143, 1254
XspI CTAG 5 cut(s) 168, 753, 762, 857, 1115
ZraI GACGTC 1 cut(s) 538
Zsp2I ATGCAT 1 cut(s) 950
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.