FvH4_3g33042

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000103
Physical Location & Seq
Forward (+)
28441365 .. 28443556
2192 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g33042.t1

Sequence Viewer

Length: 1287 bp
ATGGAACTGGACAGAATTAGCAGTTTACCGAATGATGTCACAGAAAAGATTTTGTCACATCTGCTGCCTAGAGAAGCAGCGAGGACAAGTGTTTTATCGACCAAGTGGAGATACAAATCGGCCATGCTTCATGATCTAGAGTTTGATGAGTGTTGTTGGAGTGAAAGCCAAAATCGGGAGGTTGATGATTGTGATGATCAAACAAGCTTTGTGAAAATGGTTGATCATGTACTCTTACTTCATATCGGCCCCATACGCAAGTTTAAGCTGGTTTGTGATTTAAATGAGCTAACTACTAGAGATATTGATCGATGGGTTACTCATCTATCAAGAAACTCTATCAAAGAGTTGATACTCTTTCTTTGGGAATCTGGATACAAGATCCCATTATGTGTGTTTTCTTGTCAAGATCTCGTTCGTTTGGAGTTCACTCAGTGTATGCTCAAACCTCCGTCAACGTTCAAAGGATTTAGTAGCTTGAAAAGCCTTCAACTTATCGCTGTTGACTTGGACCAAGATGTGTTTCAAATTTTGATTCGTTCTAGTCCTCTGCTTGAGAAATTAACACTGCGACATTGTGAGGGTGTTAGCAATCTCAAGATTAATGCACCAAACCTCAAATATATGCATGTTTTAGGTACTTTCGATGTTGTCAACCTTGAGAGTGCCTTGAATATTACTGAGGCTGAAGTTTATGTAAGCATCCATTCTGAGTCTGCTTACGACAGATGGGTTCCTGACAGTTGGAAACCCAGCAGTTCTAGCAATTTGCTCAAGATTTTTGATCACCTCCCACGTATTCGAAGGCTCGAGATTAAGTGGCACTTTTTGAAGTATTTGTCTTTGGGTGCGTTGCCAGAAAAGCTCCCTAAACCCTGCCAGTATCTGAAAGTTCTTACTATGGACTTATGCTTTGATGATCCGGATGCAATTCAAACTGCTCTATGCATTCTGATAAGCTCCCCTGCTCTGCAGGAATTAGAAATCTTTATGGATGACAGAAAGAAACTCACAAGGTCACCCGGTGTTGTCGAACAACAGAACTCTTCTTGTTTCGAGGTCAGCTACAACTGCACATTCTATCAACTGCGACTTGTGAACATAACCCGGATCTCTGGTGTTGAAGCTGAACTAGATTTCATCAAATGTATACTTTTAGGTTCACCTCTGCTTGAGAGAATGACTGTCACGCCTGCTTCTATGGATGGTTTTACAAAACTTGTAAAAGAGCTACTCCAGCTTAAACGTGAATCGAAGCATGCAGCGATAATTCTCATGGATCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

429

Amino Acids

49.2

Weight (kDa)

5.93

Isoelectric Point (pI)

49.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 86 - 397 2e-17 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 102 - 329 1.4e-16 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1150
AccIII TCCGGA 1 cut(s) 922
AclI AACGTT 1 cut(s) 458
AclWI GGATC 4 cut(s) 376, 914, 1118, 1274
AcoI YGGCCR 1 cut(s) 120
AcsI RAATTY 1 cut(s) 528
AcuI CTGAAG 1 cut(s) 708
AdeI CACNNNGTG 2 cut(s) 435, 1025
AfaI GTAC 2 cut(s) 231, 640
AfiI CCNNNNNNNGG 1 cut(s) 175
AgsI TTSAA 8 cut(s) 463, 481, 491, 527, 673, 832, 935, 1124
AjuI GAANNNNNNNTTGG 2 cut(s) 507, 539
AlwI GGATC 4 cut(s) 376, 914, 1118, 1274
AlwNI CAGNNNCTG 1 cut(s) 886
Ama87I CYCGRG 1 cut(s) 809
Aor13HI TCCGGA 1 cut(s) 922
AoxI GGCC 2 cut(s) 120, 247
ApeKI GCWGC 3 cut(s) 64, 77, 1262
ApoI RAATTY 1 cut(s) 528
ArsI GACNNNNNNTTYG 2 cut(s) 896, 928
AseI ATTAAT 1 cut(s) 603
AspS9I GGNCC 2 cut(s) 248, 511
AsuC2I CCSGG 2 cut(s) 1023, 1108
AsuHPI GGTGA 3 cut(s) 779, 1011, 1155
AsuII TTCGAA 1 cut(s) 802
AvaI CYCGRG 1 cut(s) 809
AvaII GGWCC 1 cut(s) 511
BamHI GGATCC 1 cut(s) 1279
BarI GAAGNNNNNNTAC 2 cut(s) 222, 254
BbvI GCAGC 3 cut(s) 51, 89, 1274
BccI CCATC 3 cut(s) 306, 723, 1199
BciVI GTATCC 1 cut(s) 368
BclI TGATCA 3 cut(s) 196, 223, 784
BcnI CCSGG 2 cut(s) 1023, 1108
BfaI CTAG 6 cut(s) 69, 137, 297, 543, 762, 1133
BfmI CTRYAG 1 cut(s) 971
BfuI GTATCC 1 cut(s) 368
BglII AGATCT 1 cut(s) 409
BisI GCNGC 3 cut(s) 65, 78, 1263
BlsI GCNGC 3 cut(s) 66, 79, 1264
Bme1390I CCNGG 2 cut(s) 1023, 1108
Bme18I GGWCC 1 cut(s) 511
BmeT110I CYCGRG 1 cut(s) 809
BmgT120I GGNCC 2 cut(s) 248, 511
BmiI GGNNCC 3 cut(s) 250, 735, 1281
BmrFI CCNGG 2 cut(s) 1023, 1108
BmsI GCATC 2 cut(s) 711, 916
BpmI CTGGAG 1 cut(s) 1220
Bpu14I TTCGAA 1 cut(s) 802
BpuEI CTTGAG 5 cut(s) 575, 581, 680, 758, 1193
BpuMI CCSGG 2 cut(s) 1023, 1108
Bsa29I ATCGAT 1 cut(s) 310
BsaAI YACGTR 1 cut(s) 797
BsaBI GATNNNNATC 2 cut(s) 115, 306
BsaWI WCCGGW 1 cut(s) 922
Bsc4I CCNNNNNNNGG 1 cut(s) 175
Bse1I ACTGG 2 cut(s) 12, 880
Bse8I GATNNNNATC 2 cut(s) 115, 306
BseAI TCCGGA 1 cut(s) 922
BseCI ATCGAT 1 cut(s) 310
BseGI GGATG 4 cut(s) 702, 931, 1000, 1210
BseJI GATNNNNATC 2 cut(s) 115, 306
BseLI CCNNNNNNNGG 1 cut(s) 175
BseMII CTCAG 3 cut(s) 446, 672, 702
BseNI ACTGG 2 cut(s) 12, 880
BseXI GCAGC 3 cut(s) 51, 89, 1274
BseYI CCCAGC 1 cut(s) 752
BsgI GTGCAG 1 cut(s) 1057
BshFI GGCC 2 cut(s) 122, 249
BshVI ATCGAT 1 cut(s) 310
BsiHKCI CYCGRG 1 cut(s) 809
BsiSI CCGG 3 cut(s) 923, 1023, 1108
BslI CCNNNNNNNGG 1 cut(s) 175
BsmI GAATGC 1 cut(s) 948
BsnI GGCC 2 cut(s) 122, 249
BsoBI CYCGRG 1 cut(s) 809
Bsp119I TTCGAA 1 cut(s) 802
Bsp13I TCCGGA 1 cut(s) 922
BspANI GGCC 2 cut(s) 122, 249
BspCNI CTCAG 3 cut(s) 445, 673, 703
BspDI ATCGAT 1 cut(s) 310
BspEI TCCGGA 1 cut(s) 922
BspHI TCATGA 1 cut(s) 130
BspLI GGNNCC 3 cut(s) 250, 735, 1281
BspMAI CTGCAG 1 cut(s) 975
BspPI GGATC 4 cut(s) 376, 914, 1118, 1274
BspT104I TTCGAA 1 cut(s) 802
BsrI ACTGG 2 cut(s) 12, 880
BssNAI GTATAC 1 cut(s) 1151
Bst1107I GTATAC 1 cut(s) 1151
Bst4CI ACNGT 2 cut(s) 743, 1186
Bst6I CTCTTC 1 cut(s) 1051
BstBAI YACGTR 1 cut(s) 797
BstBI TTCGAA 1 cut(s) 802
BstC8I GCNNGC 2 cut(s) 1194, 1260
BstDEI CTNAG 3 cut(s) 432, 681, 711
BstEII GGTNACC 1 cut(s) 1017
BstF5I GGATG 4 cut(s) 702, 931, 1000, 1210
BstMWI GCNNNNNNNGC 6 cut(s) 255, 483, 762, 862, 1071, 1237
BstNSI RCATGY 2 cut(s) 632, 1262
BstPI GGTNACC 1 cut(s) 1017
BstSCI CCNGG 2 cut(s) 1021, 1106
BstSFI CTRYAG 1 cut(s) 971
BstV1I GCAGC 3 cut(s) 51, 89, 1274
BstX2I RGATCY 4 cut(s) 381, 409, 1110, 1279
BstYI RGATCY 4 cut(s) 381, 409, 1110, 1279
BstZ17I GTATAC 1 cut(s) 1151
Bsu15I ATCGAT 1 cut(s) 310
BsuI GTATCC 1 cut(s) 368
BsuRI GGCC 2 cut(s) 122, 249
BsuTUI ATCGAT 1 cut(s) 310
BtsCI GGATG 4 cut(s) 702, 931, 1000, 1210
BtsI GCAGTG 1 cut(s) 566
BtsIMutI CAGTG 2 cut(s) 440, 566
Cac8I GCNNGC 2 cut(s) 1194, 1260
CaiI CAGNNNCTG 1 cut(s) 886
CciI TCATGA 1 cut(s) 130
Cfr13I GGNCC 2 cut(s) 248, 511
ClaI ATCGAT 1 cut(s) 310
Csp6I GTAC 2 cut(s) 230, 639
CviAII CATG 6 cut(s) 124, 131, 227, 629, 1259, 1276
CviQI GTAC 2 cut(s) 230, 639
DdeI CTNAG 3 cut(s) 432, 681, 711
DraI TTTAAA 1 cut(s) 282
DraIII CACNNNGTG 2 cut(s) 435, 1025
EaeI YGGCCR 1 cut(s) 120
Eam1104I CTCTTC 1 cut(s) 1051
EarI CTCTTC 1 cut(s) 1051
Eco47I GGWCC 1 cut(s) 511
Eco57I CTGAAG 1 cut(s) 708
Eco88I CYCGRG 1 cut(s) 809
Eco91I GGTNACC 1 cut(s) 1017
EcoO65I GGTNACC 1 cut(s) 1017
EcoT22I ATGCAT 2 cut(s) 630, 950
FaeI CATG 6 cut(s) 127, 134, 230, 632, 1262, 1279
FalI AAGNNNNNCTT 2 cut(s) 809, 841
FatI CATG 6 cut(s) 123, 130, 226, 628, 1258, 1275
FbaI TGATCA 3 cut(s) 196, 223, 784
FblI GTMKAC 1 cut(s) 1150
Fnu4HI GCNGC 3 cut(s) 65, 78, 1263
FokI GGATG 4 cut(s) 689, 938, 1007, 1217
Fsp4HI GCNGC 3 cut(s) 65, 78, 1263
FspBI CTAG 6 cut(s) 69, 137, 297, 543, 762, 1133
GluI GCNGC 3 cut(s) 65, 78, 1263
GsaI CCCAGC 1 cut(s) 756
GsuI CTGGAG 1 cut(s) 1220
HaeIII GGCC 2 cut(s) 122, 249
HapII CCGG 3 cut(s) 923, 1023, 1108
Hin1II CATG 6 cut(s) 127, 134, 230, 632, 1262, 1279
HincII GTYRAC 3 cut(s) 456, 505, 655
HindII GTYRAC 3 cut(s) 456, 505, 655
HindIII AAGCTT 1 cut(s) 205
HinfI GANTC 4 cut(s) 368, 535, 713, 1250
HpaII CCGG 3 cut(s) 923, 1023, 1108
HphI GGTGA 3 cut(s) 779, 1011, 1155
Hpy166II GTNNAC 8 cut(s) 26, 429, 456, 505, 655, 1099, 1151, 1163
Hpy188I TCNGA 3 cut(s) 712, 888, 954
Hpy8I GTNNAC 8 cut(s) 26, 429, 456, 505, 655, 1099, 1151, 1163
HpyAV CCTTC 2 cut(s) 497, 798
HpyCH4III ACNGT 2 cut(s) 743, 1186
HpyCH4IV ACGT 3 cut(s) 458, 796, 1246
HpyCH4V TGCA 7 cut(s) 608, 628, 929, 948, 973, 1074, 1262
HpyF10VI GCNNNNNNNGC 6 cut(s) 255, 483, 762, 862, 1071, 1237
HpyF3I CTNAG 3 cut(s) 432, 681, 711
HpySE526I ACGT 3 cut(s) 458, 796, 1246
Hsp92II CATG 6 cut(s) 127, 134, 230, 632, 1262, 1279
Kpn2I TCCGGA 1 cut(s) 922
Ksp22I TGATCA 3 cut(s) 196, 223, 784
LmnI GCTCC 2 cut(s) 870, 965
Lsp1109I GCAGC 3 cut(s) 51, 89, 1274
LweI GCATC 2 cut(s) 711, 916
MaeI CTAG 6 cut(s) 69, 137, 297, 543, 762, 1133
MaeII ACGT 3 cut(s) 458, 796, 1246
MaeIII GTNAC 5 cut(s) 37, 54, 316, 1017, 1186
MboII GAAGA 1 cut(s) 1038
MflI RGATCY 4 cut(s) 381, 409, 1110, 1279
MluCI AATT 7 cut(s) 15, 528, 560, 766, 930, 977, 1269
MlyI GAGTC 1 cut(s) 722
MmeI TCCRAC 2 cut(s) 137, 725
Mph1103I ATGCAT 2 cut(s) 630, 950
MroI TCCGGA 1 cut(s) 922
MseI TTAA 6 cut(s) 264, 281, 563, 603, 816, 1242
MspI CCGG 3 cut(s) 923, 1023, 1108
MspR9I CCNGG 2 cut(s) 1023, 1108
Mva1269I GAATGC 1 cut(s) 948
MwoI GCNNNNNNNGC 6 cut(s) 255, 483, 762, 862, 1071, 1237
NciI CCSGG 2 cut(s) 1023, 1108
NlaIII CATG 6 cut(s) 127, 134, 230, 632, 1262, 1279
NlaIV GGNNCC 3 cut(s) 250, 735, 1281
NmuCI GTSAC 4 cut(s) 37, 54, 1017, 1186
NsiI ATGCAT 2 cut(s) 630, 950
NspI RCATGY 2 cut(s) 632, 1262
NspV TTCGAA 1 cut(s) 802
PaeI GCATGC 1 cut(s) 1262
PaeR7I CTCGAG 1 cut(s) 809
PagI TCATGA 1 cut(s) 130
PctI GAATGC 1 cut(s) 948
PfeI GAWTC 3 cut(s) 368, 535, 1250
PkrI GCNGC 3 cut(s) 66, 79, 1264
PleI GAGTC 1 cut(s) 721
PpsI GAGTC 1 cut(s) 721
Ppu21I YACGTR 1 cut(s) 797
PshBI ATTAAT 1 cut(s) 603
Psp1406I AACGTT 1 cut(s) 458
PspEI GGTNACC 1 cut(s) 1017
PspFI CCCAGC 1 cut(s) 752
PspN4I GGNNCC 3 cut(s) 250, 735, 1281
PspPI GGNCC 2 cut(s) 248, 511
PstI CTGCAG 1 cut(s) 975
PstNI CAGNNNCTG 1 cut(s) 886
PsuI RGATCY 4 cut(s) 381, 409, 1110, 1279
RsaI GTAC 2 cut(s) 231, 640
RsaNI GTAC 2 cut(s) 230, 639
SaqAI TTAA 6 cut(s) 264, 281, 563, 603, 816, 1242
SatI GCNGC 3 cut(s) 65, 78, 1263
Sau96I GGNCC 2 cut(s) 248, 511
SchI GAGTC 1 cut(s) 722
ScrFI CCNGG 2 cut(s) 1023, 1108
SfaNI GCATC 2 cut(s) 711, 916
SfcI CTRYAG 1 cut(s) 971
Sfr274I CTCGAG 1 cut(s) 809
SfuI TTCGAA 1 cut(s) 802
SinI GGWCC 1 cut(s) 511
SlaI CTCGAG 1 cut(s) 809
SmiI ATTTAAAT 1 cut(s) 282
SmlI CTYRAG 6 cut(s) 554, 596, 659, 773, 809, 1172
SmoI CTYRAG 6 cut(s) 554, 596, 659, 773, 809, 1172
SphI GCATGC 1 cut(s) 1262
Sse9I AATT 7 cut(s) 15, 528, 560, 766, 930, 977, 1269
SspI AATATT 1 cut(s) 676
SspMI CTAG 6 cut(s) 69, 137, 297, 543, 762, 1133
StyD4I CCNGG 2 cut(s) 1021, 1106
SwaI ATTTAAAT 1 cut(s) 282
TaaI ACNGT 2 cut(s) 743, 1186
TaiI ACGT 3 cut(s) 461, 799, 1249
TaqI TCGA 8 cut(s) 98, 310, 645, 802, 810, 1032, 1056, 1253
TasI AATT 7 cut(s) 15, 528, 560, 766, 930, 977, 1269
TatI WGTACW 1 cut(s) 229
TfiI GAWTC 3 cut(s) 368, 535, 1250
Tru1I TTAA 6 cut(s) 264, 281, 563, 603, 816, 1242
Tru9I TTAA 6 cut(s) 264, 281, 563, 603, 816, 1242
TscAI CASTG 2 cut(s) 440, 573
TseFI GTSAC 4 cut(s) 37, 54, 1017, 1186
TseI GCWGC 3 cut(s) 64, 77, 1262
Tsp45I GTSAC 4 cut(s) 37, 54, 1017, 1186
TspDTI ATGAA 3 cut(s) 119, 230, 1129
TspGWI ACGGA 1 cut(s) 441
TspRI CASTG 2 cut(s) 440, 573
VpaK11BI GGWCC 1 cut(s) 511
VspI ATTAAT 1 cut(s) 603
XapI RAATTY 1 cut(s) 528
XbaI TCTAGA 1 cut(s) 136
XceI RCATGY 2 cut(s) 632, 1262
XhoI CTCGAG 1 cut(s) 809
XmiI GTMKAC 1 cut(s) 1150
XspI CTAG 6 cut(s) 69, 137, 297, 543, 762, 1133
Zsp2I ATGCAT 2 cut(s) 630, 950
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.