MD05G1103500.v1.1

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000103
Physical Location & Seq
Forward (+)
21489761 .. 21491902
2142 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1103500.v1.1.491

Sequence Viewer

Length: 1293 bp
ATGAAACAAGGAAATCAGTCCGAGTCCTCTTTGAAAAGAAAGATGGAGTTGGACAGAATTAGCAACTTACCAAGTGATGTTATAGGACAAATTTTGTCAGGTTTGCCTATTAAGGAGGCAGTGAAGACAAATGTTTTGTCAAGCAAATGGAGGTTCAACTCGGCTATGATTCCACATCTTGTGTTTGATTGTTTCTCGACTTCAGACCGTACATTTATTGAGAGCATTGTAGATCAAGTACTGGTACTTCATGTTGGCTCCATACACACATTCAGGCTTTCTCATCCAGATATTGTAGCCACTAGTGCTATTGATCATTGGATTCGTCATCTATCAAGAAATGCTATCAAAGAGTTGGTGCTTGAAATTTTGGAAGGGGACACTTACAAGATTCCTTCATGTTTGTTTTCTTATCAATATTTGGTTCATTTAGAGTTAAATAATTGTTTGCTAAAACCTCCTTCCACCTTCAAAGGCTTTGGGAGATTGAAGGTCCTTTGTCTTGATCTAGTTACAGTGGTTCAAGATGTGCTTGATAATCTGATTGTTTGCTGCCCTCTGCTTGAGAGATTGACTTTAACAAAATGTGATGGCTTTAATGTGATGACTTTAACAAAATTCTTTGAGTATGACGGCTCTTTTGAGCATGTTAGTATTATGAATACGTTAAATCTTGCTGTAGTTTGCATTAATTTGGTCGGTGATGGCCTTACCTGGACTCGCCCTCTCAGTTCTAGCTATTTGGTCAATTTTCTTGCTCATCTGCTCCATATTCGAAGGCTCACAATTCAGTCTGAATTTTTAGCGGTAATGGATTATTTGGCTTCCTACTTTAATTTCATGACCATTTACCTGCCCATGGGTGTTTCAGCATATTCATTGAGTCTGATGCTTCCATTCTGCTCCAGTACTTGGCGGATGGCATTCGATGAGGATCAGTCTGTTGAGGAAGAAGTGAACTCTTGCAAGTATATTTTGGTTAATAAAATATTAGAATTTCTGTTATTTTTGTTTATTTCTGAATTGTTCTCCAACATAGATGACAATCAAGATTGCCTATTGACCCAACTGCGACTTGTTAAAATAACCAACATCTCTGGTATCAAAGCTGAACTAGATTTCATTGAATTCCTACTTTCAAGTTCACCTGTGCTCGAGAAAACTGCGGTTAAGCCTGCTTTTGACGATTGTTCTTCAGACCTATTGAAAAACATGATCCGGTTTAGGCATGCCTCAGCGCATTGCGAGATAATCTACTTGGACCCATGGTTCATCCATGAACATCGCGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

431

Amino Acids

49.1

Weight (kDa)

5.69

Isoelectric Point (pI)

37.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 90 - 206 1.5e-12 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 104 - 202 2.9e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 352 - 388 1.5e-06 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 861
AccB7I CCANNNNNTGG 1 cut(s) 912
AccII CGCG 1 cut(s) 1287
AciI CCGC 3 cut(s) 806, 916, 1166
AclWI GGATC 2 cut(s) 942, 1210
AcsI RAATTY 6 cut(s) 90, 366, 617, 797, 995, 1127
AcuI CTGAAG 2 cut(s) 186, 1179
AfaI GTAC 4 cut(s) 211, 240, 246, 910
AfiI CCNNNNNNNGG 2 cut(s) 859, 912
AgsI TTSAA 9 cut(s) 34, 157, 365, 472, 490, 524, 1127, 1140, 1207
AhlI ACTAGT 1 cut(s) 302
AjnI CCWGG 1 cut(s) 713
AloI GAACNNNNNNTCC 2 cut(s) 1253, 1285
AluBI AGCT 2 cut(s) 738, 1109
AluI AGCT 2 cut(s) 738, 1109
Alw21I GWGCWC 1 cut(s) 1155
AlwI GGATC 2 cut(s) 942, 1210
Ama87I CYCGRG 1 cut(s) 1154
AoxI GGCC 1 cut(s) 706
ApeKI GCWGC 1 cut(s) 552
ApoI RAATTY 6 cut(s) 90, 366, 617, 797, 995, 1127
ArsI GACNNNNNNTTYG 6 cut(s) 118, 122, 150, 154, 623, 655
AseI ATTAAT 1 cut(s) 690
AspLEI GCGC 1 cut(s) 1240
AspS9I GGNCC 2 cut(s) 493, 1261
AsuHPI GGTGA 2 cut(s) 713, 1137
AsuII TTCGAA 1 cut(s) 775
AvaI CYCGRG 1 cut(s) 1154
AvaII GGWCC 2 cut(s) 493, 1261
BarI GAAGNNNNNNTAC 2 cut(s) 231, 263
BbsI GAAGAC 1 cut(s) 131
Bbv12I GWGCWC 1 cut(s) 1155
BbvCI CCTCAGC 1 cut(s) 1234
BbvI GCAGC 1 cut(s) 539
BccI CCATC 4 cut(s) 37, 584, 698, 913
BceAI ACGGC 1 cut(s) 649
BcgI CGANNNNNNTGC 2 cut(s) 1145, 1179
BciT130I CCWGG 1 cut(s) 715
BclI TGATCA 1 cut(s) 313
BcuI ACTAGT 1 cut(s) 302
BfaI CTAG 4 cut(s) 303, 509, 735, 1115
BfmI CTRYAG 1 cut(s) 678
BfuAI ACCTGC 1 cut(s) 861
BisI GCNGC 1 cut(s) 553
BlsI GCNGC 1 cut(s) 554
BmcAI AGTACT 2 cut(s) 240, 910
Bme1390I CCNGG 1 cut(s) 715
Bme18I GGWCC 2 cut(s) 493, 1261
BmeT110I CYCGRG 1 cut(s) 1154
BmgT120I GGNCC 2 cut(s) 493, 1261
BmiI GGNNCC 2 cut(s) 259, 1263
BmrFI CCNGG 1 cut(s) 715
BmsI GCATC 1 cut(s) 879
BpiI GAAGAC 1 cut(s) 131
BpmI CTGGAG 1 cut(s) 889
Bpu10I CCTNAGC 1 cut(s) 1234
Bpu14I TTCGAA 1 cut(s) 775
BpuEI CTTGAG 1 cut(s) 584
BsaBI GATNNNNATC 2 cut(s) 933, 1044
BsaJI CCNNGG 2 cut(s) 858, 1265
BsaWI WCCGGW 1 cut(s) 1218
Bsc4I CCNNNNNNNGG 2 cut(s) 859, 912
Bse1I ACTGG 2 cut(s) 246, 906
Bse3DI GCAATG 1 cut(s) 1240
Bse8I GATNNNNATC 2 cut(s) 933, 1044
BseBI CCWGG 1 cut(s) 715
BseDI CCNNGG 2 cut(s) 858, 1265
BseGI GGATG 3 cut(s) 283, 924, 1272
BseJI GATNNNNATC 2 cut(s) 933, 1044
BseLI CCNNNNNNNGG 2 cut(s) 859, 912
BseMI GCAATG 1 cut(s) 1240
BseMII CTCAG 2 cut(s) 742, 1248
BseNI ACTGG 2 cut(s) 246, 906
BseXI GCAGC 1 cut(s) 539
Bsh1236I CGCG 1 cut(s) 1287
BshFI GGCC 1 cut(s) 708
BsiHKAI GWGCWC 1 cut(s) 1155
BsiHKCI CYCGRG 1 cut(s) 1154
BsiSI CCGG 1 cut(s) 1219
BslFI GGGAC 1 cut(s) 392
BslI CCNNNNNNNGG 2 cut(s) 859, 912
BsmFI GGGAC 1 cut(s) 392
BsmI GAATGC 1 cut(s) 923
BsnI GGCC 1 cut(s) 708
BsoBI CYCGRG 1 cut(s) 1154
Bsp119I TTCGAA 1 cut(s) 775
Bsp1286I GDGCHC 1 cut(s) 1155
Bsp143I GATC 5 cut(s) 232, 313, 505, 934, 1215
Bsp19I CCATGG 2 cut(s) 858, 1265
BspACI CCGC 3 cut(s) 806, 916, 1166
BspANI GGCC 1 cut(s) 708
BspCNI CTCAG 2 cut(s) 741, 1247
BspFNI CGCG 1 cut(s) 1287
BspHI TCATGA 1 cut(s) 840
BspLI GGNNCC 2 cut(s) 259, 1263
BspMI ACCTGC 1 cut(s) 861
BspPI GGATC 2 cut(s) 942, 1210
BspT104I TTCGAA 1 cut(s) 775
BsrDI GCAATG 1 cut(s) 1240
BsrI ACTGG 2 cut(s) 246, 906
BssECI CCNNGG 2 cut(s) 858, 1265
BssMI GATC 5 cut(s) 232, 313, 505, 934, 1215
BssT1I CCWWGG 2 cut(s) 858, 1265
Bst2UI CCWGG 1 cut(s) 715
Bst4CI ACNGT 2 cut(s) 209, 517
BstBI TTCGAA 1 cut(s) 775
BstC8I GCNNGC 2 cut(s) 1176, 1230
BstDEI CTNAG 2 cut(s) 728, 1234
BstDSI CCRYGG 2 cut(s) 858, 1265
BstF5I GGATG 3 cut(s) 283, 924, 1272
BstFNI CGCG 1 cut(s) 1287
BstHHI GCGC 1 cut(s) 1240
BstKTI GATC 5 cut(s) 235, 316, 508, 937, 1218
BstMBI GATC 5 cut(s) 232, 313, 505, 934, 1215
BstMWI GCNNNNNNNGC 1 cut(s) 305
BstNI CCWGG 1 cut(s) 715
BstNSI RCATGY 2 cut(s) 650, 1232
BstSCI CCNGG 1 cut(s) 713
BstSFI CTRYAG 1 cut(s) 678
BstUI CGCG 1 cut(s) 1287
BstV1I GCAGC 1 cut(s) 539
BstV2I GAAGAC 1 cut(s) 131
BsuRI GGCC 1 cut(s) 708
BtgI CCRYGG 2 cut(s) 858, 1265
BtgZI GCGATG 1 cut(s) 1268
BtsCI GGATG 3 cut(s) 283, 924, 1272
BtsI GCAGTG 1 cut(s) 126
BtsIMutI CAGTG 2 cut(s) 126, 522
BveI ACCTGC 1 cut(s) 861
Cac8I GCNNGC 2 cut(s) 1176, 1230
CciI TCATGA 1 cut(s) 840
CfoI GCGC 1 cut(s) 1240
Cfr13I GGNCC 2 cut(s) 493, 1261
CseI GACGC 1 cut(s) 1276
Csp6I GTAC 4 cut(s) 210, 239, 245, 909
CviAII CATG 9 cut(s) 251, 399, 647, 841, 859, 1213, 1229, 1266, 1277
CviQI GTAC 4 cut(s) 210, 239, 245, 909
DdeI CTNAG 2 cut(s) 728, 1234
DpnI GATC 5 cut(s) 234, 315, 507, 936, 1217
DpnII GATC 5 cut(s) 232, 313, 505, 934, 1215
EciI GGCGGA 1 cut(s) 931
Eco130I CCWWGG 2 cut(s) 858, 1265
Eco47I GGWCC 2 cut(s) 493, 1261
Eco57I CTGAAG 2 cut(s) 186, 1179
Eco88I CYCGRG 1 cut(s) 1154
EcoO109I RGGNCCY 1 cut(s) 493
EcoRI GAATTC 1 cut(s) 1127
EcoRII CCWGG 1 cut(s) 713
EcoT14I CCWWGG 2 cut(s) 858, 1265
ErhI CCWWGG 2 cut(s) 858, 1265
FaeI CATG 9 cut(s) 254, 402, 650, 844, 862, 1216, 1232, 1269, 1280
FalI AAGNNNNNCTT 2 cut(s) 516, 548
FaqI GGGAC 1 cut(s) 392
FatI CATG 9 cut(s) 250, 398, 646, 840, 858, 1212, 1228, 1265, 1276
FbaI TGATCA 1 cut(s) 313
Fnu4HI GCNGC 1 cut(s) 553
FokI GGATG 3 cut(s) 270, 931, 1259
Fsp4HI GCNGC 1 cut(s) 553
FspBI CTAG 4 cut(s) 303, 509, 735, 1115
GlaI GCGC 1 cut(s) 1239
GluI GCNGC 1 cut(s) 553
GsuI CTGGAG 1 cut(s) 889
HaeIII GGCC 1 cut(s) 708
HapII CCGG 1 cut(s) 1219
HgaI GACGC 1 cut(s) 1276
HhaI GCGC 1 cut(s) 1240
Hin1II CATG 9 cut(s) 254, 402, 650, 844, 862, 1216, 1232, 1269, 1280
Hin6I GCGC 1 cut(s) 1238
HinP1I GCGC 1 cut(s) 1238
HinfI GANTC 6 cut(s) 23, 169, 322, 391, 718, 883
HpaII CCGG 1 cut(s) 1219
HphI GGTGA 2 cut(s) 713, 1137
Hpy166II GTNNAC 2 cut(s) 958, 1145
Hpy188I TCNGA 7 cut(s) 22, 205, 543, 796, 888, 1021, 1198
Hpy188III TCNNGA 8 cut(s) 196, 287, 336, 503, 524, 841, 1049, 1156
Hpy8I GTNNAC 2 cut(s) 958, 1145
HpyAV CCTTC 6 cut(s) 368, 405, 471, 478, 484, 771
HpyCH4III ACNGT 2 cut(s) 209, 517
HpyCH4IV ACGT 1 cut(s) 665
HpyCH4V TGCA 2 cut(s) 687, 966
HpyF10VI GCNNNNNNNGC 1 cut(s) 305
HpyF3I CTNAG 2 cut(s) 728, 1234
HpySE526I ACGT 1 cut(s) 665
Hsp92II CATG 9 cut(s) 254, 402, 650, 844, 862, 1216, 1232, 1269, 1280
HspAI GCGC 1 cut(s) 1238
Ksp22I TGATCA 1 cut(s) 313
Kzo9I GATC 5 cut(s) 232, 313, 505, 934, 1215
LmnI GCTCC 3 cut(s) 263, 771, 908
Lsp1109I GCAGC 1 cut(s) 539
LweI GCATC 1 cut(s) 879
MaeI CTAG 4 cut(s) 303, 509, 735, 1115
MaeII ACGT 1 cut(s) 665
MaeIII GTNAC 1 cut(s) 511
MalI GATC 5 cut(s) 234, 315, 507, 936, 1217
MboI GATC 5 cut(s) 232, 313, 505, 934, 1215
MboII GAAGA 3 cut(s) 136, 962, 1185
MhlI GDGCHC 1 cut(s) 1155
MlyI GAGTC 3 cut(s) 32, 712, 892
MmeI TCCRAC 2 cut(s) 30, 1056
MnlI CCTC 9 cut(s) 37, 109, 144, 468, 567, 735, 925, 940, 1243
MspI CCGG 1 cut(s) 1219
MspR9I CCNGG 1 cut(s) 715
Mva1269I GAATGC 1 cut(s) 923
MvaI CCWGG 1 cut(s) 715
MvnI CGCG 1 cut(s) 1287
MwoI GCNNNNNNNGC 1 cut(s) 305
NcoI CCATGG 2 cut(s) 858, 1265
NdeII GATC 5 cut(s) 232, 313, 505, 934, 1215
NlaIII CATG 9 cut(s) 254, 402, 650, 844, 862, 1216, 1232, 1269, 1280
NlaIV GGNNCC 2 cut(s) 259, 1263
NmeAIII GCCGAG 1 cut(s) 140
NspI RCATGY 2 cut(s) 650, 1232
NspV TTCGAA 1 cut(s) 775
PaeI GCATGC 1 cut(s) 1232
PaeR7I CTCGAG 1 cut(s) 1154
PagI TCATGA 1 cut(s) 840
PctI GAATGC 1 cut(s) 923
PfeI GAWTC 3 cut(s) 169, 322, 391
PflMI CCANNNNNTGG 1 cut(s) 912
PkrI GCNGC 1 cut(s) 554
PleI GAGTC 3 cut(s) 31, 712, 891
PpsI GAGTC 3 cut(s) 31, 712, 891
PpuMI RGGWCCY 1 cut(s) 493
PshBI ATTAAT 1 cut(s) 690
Psp5II RGGWCCY 1 cut(s) 493
Psp6I CCWGG 1 cut(s) 713
PspGI CCWGG 1 cut(s) 713
PspN4I GGNNCC 2 cut(s) 259, 1263
PspPI GGNCC 2 cut(s) 493, 1261
PspPPI RGGWCCY 1 cut(s) 493
RsaI GTAC 4 cut(s) 211, 240, 246, 910
RsaNI GTAC 4 cut(s) 210, 239, 245, 909
SatI GCNGC 1 cut(s) 553
Sau3AI GATC 5 cut(s) 232, 313, 505, 934, 1215
Sau96I GGNCC 2 cut(s) 493, 1261
ScaI AGTACT 2 cut(s) 240, 910
SchI GAGTC 3 cut(s) 32, 712, 892
ScrFI CCNGG 1 cut(s) 715
SduI GDGCHC 1 cut(s) 1155
SfaNI GCATC 1 cut(s) 879
SfcI CTRYAG 1 cut(s) 678
Sfr274I CTCGAG 1 cut(s) 1154
SfuI TTCGAA 1 cut(s) 775
SinI GGWCC 2 cut(s) 493, 1261
SlaI CTCGAG 1 cut(s) 1154
SmlI CTYRAG 2 cut(s) 563, 1154
SmoI CTYRAG 2 cut(s) 563, 1154
SpeI ACTAGT 1 cut(s) 302
SphI GCATGC 1 cut(s) 1232
SsiI CCGC 3 cut(s) 806, 916, 1166
SspI AATATT 2 cut(s) 419, 990
SspMI CTAG 4 cut(s) 303, 509, 735, 1115
StyD4I CCNGG 1 cut(s) 713
StyI CCWWGG 2 cut(s) 858, 1265
TaaI ACNGT 2 cut(s) 209, 517
TaiI ACGT 1 cut(s) 668
TaqI TCGA 4 cut(s) 197, 775, 927, 1155
TatI WGTACW 2 cut(s) 238, 908
TfiI GAWTC 3 cut(s) 169, 322, 391
TscAI CASTG 2 cut(s) 126, 522
TseI GCWGC 1 cut(s) 552
TspRI CASTG 2 cut(s) 126, 522
Van91I CCANNNNNTGG 1 cut(s) 912
VpaK11BI GGWCC 2 cut(s) 493, 1261
VspI ATTAAT 1 cut(s) 690
XapI RAATTY 6 cut(s) 90, 366, 617, 797, 995, 1127
XceI RCATGY 2 cut(s) 650, 1232
XhoI CTCGAG 1 cut(s) 1154
XspI CTAG 4 cut(s) 303, 509, 735, 1115
ZrmI AGTACT 2 cut(s) 240, 910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.