FvH4_2g40420

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000103
Physical Location & Seq
Forward (+)
28784838 .. 28787783
2946 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g40420.t4

Sequence Viewer

Length: 1263 bp
ATGAAGCGAAAAGAACCACCCAAGTCCCATTACAAAATGGATATCGAGCTGGATAGACTCAGCAGCTTACCATGTCCTGTCATAGAACAGATTTTGCAGCATTTGCCTATGAAGGAGGCGGTGAGGACGAGTGTTTTGTCGACTAAATGGAGGTACAGATCATCTACGCTCGGGCGTCTTGTGTTTGATCATCACTGTGTCTCTGCTCGGAACCAGATAACCTTTGTGAACATTGTGGATCATGTTCTCTTGCTTCACACTGGTCCCATAGACATGTTCAAGCTTTCGAACAGAGACTTCTTTGCTACTAGTGACATTGACCGCTGGATTCTTTATCTCACAAGAAGCTCTGTCAAAGAGTTTGTGCTTGAGATTTGGAAAGGGGCTCGCTTCACAATGCCGTCTAGTTTGTTTTCTCTAAAAGAATTGACTCATCTGGAGTTATTCAATTGTTTGCTGAAACCACCCTCGACCTTCAAGGGCTTTAGGAATTTGAAGAGCTTAGATATTCAGCATGTTACAGTGGCCCAAGATGTGTTTGAGAATCTGATTGTTTCATGTCCTCTGCTTGAGAGATTTACTTTGATGAACTTTGACGGTTTCACTGATCTCAACATTGATGCTCCTAATCTCCAATTCTTTGACGTTGGAGGTGCTTTTGAGGATGTCAATTTTGTGAATGCCTTAAATCTTACTGTTGTTGCCATTGCTTTGTACGACCATGTACCCGATCACCAAAGACGGTCTCCTCGTCATTCTGGCAATTTGCTCAAGTTTTTTGGTCAGATACCTCGTGTTCAGAGGCTTGAAATTCAGAGTCACTTTTTAAAGTATTTGGCTGCTGGTGTGTCAGGAAGGCTGCCTAGACCATGTCGAGATCTGAATTACCTTTCTATACGGATTAACTTCAGTGACTGGGAGGAGGTTTTAACTGCTGTGTTCCTTCTCAGAAGCTCCCCTGCTCTGCAAGAACTAGAAATTTTGGTCCGCCCGGAGGAAGAGCCTGCTGCTGGAAGAACCAAGTTTTCTATAAAAGAAGACTGCAATCATCCGTTTGCCCAACTACAACTTGTGAGAATTATCGGCACCTCCAATACCCAACCTGAGGTAGATTTTATCGAATTTCTGCTTTCTAATTCACCCATGCTTGAGAAGATGACTGTTAAGCCTGCTTCTGTCAACTGTGGTTGGGAGCTGGTAAAGAAGTTGCTCCAATTTAAGCGGGCCTCAGCGAATGCAGAGATAATTTACTTGGAACCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

421

Amino Acids

48.28

Weight (kDa)

8.11

Isoelectric Point (pI)

49.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 25 - 59 5.2e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 95 - 394 3.6e-15 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 111 - 332 2e-19 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1085
AccI GTMKAC 1 cut(s) 140
AciI CCGC 4 cut(s) 119, 322, 988, 1222
AclWI GGATC 1 cut(s) 246
AcsI RAATTY 4 cut(s) 490, 810, 978, 1121
AcuI CTGAAG 1 cut(s) 892
AcyI GRCGYC 1 cut(s) 175
AfaI GTAC 3 cut(s) 155, 716, 726
AfiI CCNNNNNNNGG 3 cut(s) 994, 1010, 1105
AflIII ACRYGT 1 cut(s) 273
AgsI TTSAA 5 cut(s) 280, 448, 478, 496, 809
AhlI ACTAGT 1 cut(s) 308
AluBI AGCT 7 cut(s) 49, 66, 283, 348, 501, 954, 1195
AluI AGCT 7 cut(s) 49, 66, 283, 348, 501, 954, 1195
Alw26I GTCTC 3 cut(s) 205, 288, 750
AlwI GGATC 1 cut(s) 246
AlwNI CAGNNNCTG 1 cut(s) 915
Ama87I CYCGRG 1 cut(s) 170
AoxI GGCC 2 cut(s) 525, 1224
ApeKI GCWGC 5 cut(s) 63, 97, 839, 859, 1007
ApoI RAATTY 4 cut(s) 490, 810, 978, 1121
ArsI GACNNNNNNTTYG 2 cut(s) 118, 150
AspS9I GGNCC 4 cut(s) 263, 526, 985, 1224
AsuC2I CCSGG 1 cut(s) 992
AsuHPI GGTGA 3 cut(s) 133, 725, 1131
AsuII TTCGAA 1 cut(s) 287
AvaI CYCGRG 1 cut(s) 170
AvaII GGWCC 2 cut(s) 263, 985
AxyI CCTNAGG 1 cut(s) 1104
BanI GGYRCC 1 cut(s) 1085
BanII GRGCYC 1 cut(s) 388
BauI CACGAG 1 cut(s) 792
BbsI GAAGAC 1 cut(s) 1044
BbvCI CCTCAGC 1 cut(s) 1228
BbvI GCAGC 5 cut(s) 75, 109, 826, 846, 994
BceAI ACGGC 1 cut(s) 385
BclI TGATCA 1 cut(s) 187
BcnI CCSGG 1 cut(s) 992
BcoDI GTCTC 3 cut(s) 205, 288, 750
BcuI ACTAGT 1 cut(s) 308
BfaI CTAG 4 cut(s) 309, 405, 864, 974
BglII AGATCT 1 cut(s) 877
BisI GCNGC 5 cut(s) 64, 98, 840, 860, 1008
BlsI GCNGC 5 cut(s) 65, 99, 841, 861, 1009
Bme1390I CCNGG 1 cut(s) 992
Bme18I GGWCC 2 cut(s) 263, 985
BmeT110I CYCGRG 1 cut(s) 170
BmgT120I GGNCC 4 cut(s) 263, 526, 985, 1224
BmiI GGNNCC 4 cut(s) 212, 265, 1087, 1257
BmrFI CCNGG 1 cut(s) 992
BmrI ACTGGG 1 cut(s) 925
BmsI GCATC 1 cut(s) 610
BmuI ACTGGG 1 cut(s) 925
BpiI GAAGAC 1 cut(s) 1044
BpmI CTGGAG 1 cut(s) 458
Bpu10I CCTNAGC 1 cut(s) 1228
Bpu14I TTCGAA 1 cut(s) 287
BpuEI CTTGAG 4 cut(s) 389, 590, 755, 1169
BpuMI CCSGG 1 cut(s) 992
BsaHI GRCGYC 1 cut(s) 175
BsaI GGTCTC 1 cut(s) 750
Bsc4I CCNNNNNNNGG 3 cut(s) 994, 1010, 1105
Bse1I ACTGG 2 cut(s) 265, 920
Bse21I CCTNAGG 1 cut(s) 1104
Bse3DI GCAATG 1 cut(s) 705
BseGI GGATG 2 cut(s) 670, 1048
BseLI CCNNNNNNNGG 3 cut(s) 994, 1010, 1105
BseMI GCAATG 1 cut(s) 705
BseMII CTCAG 4 cut(s) 73, 961, 1095, 1242
BseNI ACTGG 2 cut(s) 265, 920
BseRI GAGGAG 2 cut(s) 738, 935
BseXI GCAGC 5 cut(s) 75, 109, 826, 846, 994
BshFI GGCC 2 cut(s) 527, 1226
BshNI GGYRCC 1 cut(s) 1085
BsiHKCI CYCGRG 1 cut(s) 170
BsiSI CCGG 1 cut(s) 992
BslFI GGGAC 2 cut(s) 10, 249
BslI CCNNNNNNNGG 3 cut(s) 994, 1010, 1105
BsmAI GTCTC 3 cut(s) 205, 288, 750
BsmFI GGGAC 2 cut(s) 10, 249
BsmI GAATGC 2 cut(s) 685, 1240
BsnI GGCC 2 cut(s) 527, 1226
Bso31I GGTCTC 1 cut(s) 750
BsoBI CYCGRG 1 cut(s) 170
Bsp119I TTCGAA 1 cut(s) 287
Bsp1286I GDGCHC 1 cut(s) 388
Bsp143I GATC 6 cut(s) 158, 187, 238, 607, 730, 877
BspACI CCGC 4 cut(s) 119, 322, 988, 1222
BspANI GGCC 2 cut(s) 527, 1226
BspCNI CTCAG 4 cut(s) 72, 960, 1096, 1241
BspLI GGNNCC 4 cut(s) 212, 265, 1087, 1257
BspPI GGATC 1 cut(s) 246
BspQI GCTCTTC 2 cut(s) 491, 993
BspT104I TTCGAA 1 cut(s) 287
BspT107I GGYRCC 1 cut(s) 1085
BspTNI GGTCTC 1 cut(s) 750
BsrDI GCAATG 1 cut(s) 705
BsrI ACTGG 2 cut(s) 265, 920
BssMI GATC 6 cut(s) 158, 187, 238, 607, 730, 877
BssNI GRCGYC 1 cut(s) 175
BssSI CACGAG 1 cut(s) 792
Bst2BI CACGAG 1 cut(s) 792
Bst4CI ACNGT 7 cut(s) 197, 523, 599, 697, 744, 1162, 1184
Bst6I CTCTTC 2 cut(s) 491, 993
BstACI GRCGYC 1 cut(s) 175
BstAPI GCANNNNNTGC 1 cut(s) 103
BstBI TTCGAA 1 cut(s) 287
BstC8I GCNNGC 4 cut(s) 388, 1005, 1170, 1224
BstDEI CTNAG 5 cut(s) 59, 502, 947, 1104, 1228
BstF5I GGATG 2 cut(s) 670, 1048
BstKTI GATC 6 cut(s) 161, 190, 241, 610, 733, 880
BstMAI GTCTC 3 cut(s) 205, 288, 750
BstMBI GATC 6 cut(s) 158, 187, 238, 607, 730, 877
BstMWI GCNNNNNNNGC 1 cut(s) 103
BstNSI RCATGY 2 cut(s) 277, 518
BstSCI CCNGG 1 cut(s) 990
BstV1I GCAGC 5 cut(s) 75, 109, 826, 846, 994
BstV2I GAAGAC 1 cut(s) 1044
BstX2I RGATCY 1 cut(s) 877
BstYI RGATCY 1 cut(s) 877
Bsu36I CCTNAGG 1 cut(s) 1104
BsuRI GGCC 2 cut(s) 527, 1226
BtsCI GGATG 2 cut(s) 670, 1048
BtsIMutI CAGTG 5 cut(s) 193, 258, 528, 603, 916
Cac8I GCNNGC 4 cut(s) 388, 1005, 1170, 1224
CaiI CAGNNNCTG 1 cut(s) 915
Cfr13I GGNCC 4 cut(s) 263, 526, 985, 1224
CseI GACGC 1 cut(s) 164
Csp6I GTAC 3 cut(s) 154, 715, 725
CviAII CATG 9 cut(s) 72, 242, 274, 515, 558, 722, 870, 1144, 1260
CviQI GTAC 3 cut(s) 154, 715, 725
DdeI CTNAG 5 cut(s) 59, 502, 947, 1104, 1228
DpnI GATC 6 cut(s) 160, 189, 240, 609, 732, 879
DpnII GATC 6 cut(s) 158, 187, 238, 607, 730, 877
DraI TTTAAA 1 cut(s) 828
Eam1104I CTCTTC 2 cut(s) 491, 993
EarI CTCTTC 2 cut(s) 491, 993
EciI GGCGGA 1 cut(s) 977
Eco24I GRGCYC 1 cut(s) 388
Eco31I GGTCTC 1 cut(s) 750
Eco32I GATATC 1 cut(s) 43
Eco47I GGWCC 2 cut(s) 263, 985
Eco57I CTGAAG 1 cut(s) 892
Eco81I CCTNAGG 1 cut(s) 1104
Eco88I CYCGRG 1 cut(s) 170
EcoRV GATATC 1 cut(s) 43
EcoT38I GRGCYC 1 cut(s) 388
FaeI CATG 9 cut(s) 75, 245, 277, 518, 561, 725, 873, 1147, 1263
FaqI GGGAC 2 cut(s) 10, 249
FatI CATG 9 cut(s) 71, 241, 273, 514, 557, 721, 869, 1143, 1259
FauI CCCGC 1 cut(s) 1215
FbaI TGATCA 1 cut(s) 187
FblI GTMKAC 1 cut(s) 140
Fnu4HI GCNGC 5 cut(s) 64, 98, 840, 860, 1008
FokI GGATG 2 cut(s) 677, 1035
FriOI GRGCYC 1 cut(s) 388
Fsp4HI GCNGC 5 cut(s) 64, 98, 840, 860, 1008
FspBI CTAG 4 cut(s) 309, 405, 864, 974
GluI GCNGC 5 cut(s) 64, 98, 840, 860, 1008
GsuI CTGGAG 1 cut(s) 458
HaeIII GGCC 2 cut(s) 527, 1226
HapII CCGG 1 cut(s) 992
HgaI GACGC 1 cut(s) 164
Hin1I GRCGYC 1 cut(s) 175
Hin1II CATG 9 cut(s) 75, 245, 277, 518, 561, 725, 873, 1147, 1263
HincII GTYRAC 2 cut(s) 141, 1180
HindII GTYRAC 2 cut(s) 141, 1180
HindIII AAGCTT 1 cut(s) 281
HinfI GANTC 5 cut(s) 57, 328, 430, 544, 817
HpaII CCGG 1 cut(s) 992
HphI GGTGA 3 cut(s) 133, 725, 1131
Hpy166II GTNNAC 3 cut(s) 141, 229, 1180
Hpy188I TCNGA 7 cut(s) 210, 549, 786, 801, 816, 882, 950
Hpy188III TCNNGA 3 cut(s) 437, 852, 875
Hpy8I GTNNAC 3 cut(s) 141, 229, 1180
HpyAV CCTTC 4 cut(s) 106, 484, 849, 953
HpyCH4III ACNGT 7 cut(s) 197, 523, 599, 697, 744, 1162, 1184
HpyCH4IV ACGT 1 cut(s) 645
HpyCH4V TGCA 4 cut(s) 97, 967, 1044, 1238
HpyF10VI GCNNNNNNNGC 1 cut(s) 103
HpyF3I CTNAG 5 cut(s) 59, 502, 947, 1104, 1228
HpySE526I ACGT 1 cut(s) 645
Hsp92I GRCGYC 1 cut(s) 175
Hsp92II CATG 9 cut(s) 75, 245, 277, 518, 561, 725, 873, 1147, 1263
Ksp22I TGATCA 1 cut(s) 187
Kzo9I GATC 6 cut(s) 158, 187, 238, 607, 730, 877
LguI GCTCTTC 2 cut(s) 491, 993
LmnI GCTCC 4 cut(s) 628, 959, 1192, 1215
Lsp1109I GCAGC 5 cut(s) 75, 109, 826, 846, 994
LweI GCATC 1 cut(s) 610
MaeI CTAG 4 cut(s) 309, 405, 864, 974
MaeII ACGT 1 cut(s) 645
MaeIII GTNAC 4 cut(s) 311, 517, 818, 911
MalI GATC 6 cut(s) 160, 189, 240, 609, 732, 879
MboI GATC 6 cut(s) 158, 187, 238, 607, 730, 877
MboII GAAGA 5 cut(s) 508, 1010, 1026, 1049, 1165
MfeI CAATTG 1 cut(s) 448
MflI RGATCY 1 cut(s) 877
MhlI GDGCHC 1 cut(s) 388
MlyI GAGTC 3 cut(s) 51, 424, 826
MmeI TCCRAC 1 cut(s) 628
MseI TTAA 6 cut(s) 686, 827, 903, 929, 1164, 1218
MslI CAYNNNNRTG 2 cut(s) 195, 272
MspA1I CMGCKG 1 cut(s) 324
MspI CCGG 1 cut(s) 992
MspR9I CCNGG 1 cut(s) 992
MunI CAATTG 1 cut(s) 448
Mva1269I GAATGC 2 cut(s) 685, 1240
MwoI GCNNNNNNNGC 1 cut(s) 103
NciI CCSGG 1 cut(s) 992
NdeII GATC 6 cut(s) 158, 187, 238, 607, 730, 877
NlaIII CATG 9 cut(s) 75, 245, 277, 518, 561, 725, 873, 1147, 1263
NlaIV GGNNCC 4 cut(s) 212, 265, 1087, 1257
NmuCI GTSAC 3 cut(s) 311, 818, 911
NspI RCATGY 2 cut(s) 277, 518
NspV TTCGAA 1 cut(s) 287
PciI ACATGT 1 cut(s) 273
PciSI GCTCTTC 2 cut(s) 491, 993
PcsI WCGNNNNNNNCGW 1 cut(s) 748
PctI GAATGC 2 cut(s) 685, 1240
PfeI GAWTC 2 cut(s) 328, 544
PflFI GACNNNGTC 1 cut(s) 870
PkrI GCNGC 5 cut(s) 65, 99, 841, 861, 1009
PleI GAGTC 3 cut(s) 51, 424, 825
PpsI GAGTC 3 cut(s) 51, 424, 825
PscI ACATGT 1 cut(s) 273
PspN4I GGNNCC 4 cut(s) 212, 265, 1087, 1257
PspPI GGNCC 4 cut(s) 263, 526, 985, 1224
PstNI CAGNNNCTG 1 cut(s) 915
PsuI RGATCY 1 cut(s) 877
PsyI GACNNNGTC 1 cut(s) 870
RsaI GTAC 3 cut(s) 155, 716, 726
RsaNI GTAC 3 cut(s) 154, 715, 725
RseI CAYNNNNRTG 2 cut(s) 195, 272
SalI GTCGAC 1 cut(s) 139
SapI GCTCTTC 2 cut(s) 491, 993
SaqAI TTAA 6 cut(s) 686, 827, 903, 929, 1164, 1218
SatI GCNGC 5 cut(s) 64, 98, 840, 860, 1008
Sau3AI GATC 6 cut(s) 158, 187, 238, 607, 730, 877
Sau96I GGNCC 4 cut(s) 263, 526, 985, 1224
SchI GAGTC 3 cut(s) 51, 424, 826
ScrFI CCNGG 1 cut(s) 992
SduI GDGCHC 1 cut(s) 388
SfaNI GCATC 1 cut(s) 610
SfuI TTCGAA 1 cut(s) 287
SinI GGWCC 2 cut(s) 263, 985
SmiMI CAYNNNNRTG 2 cut(s) 195, 272
SmlI CTYRAG 4 cut(s) 368, 569, 770, 1148
SmoI CTYRAG 4 cut(s) 368, 569, 770, 1148
SpeI ACTAGT 1 cut(s) 308
SsiI CCGC 4 cut(s) 119, 322, 988, 1222
SspMI CTAG 4 cut(s) 309, 405, 864, 974
StyD4I CCNGG 1 cut(s) 990
TaaI ACNGT 7 cut(s) 197, 523, 599, 697, 744, 1162, 1184
TaiI ACGT 1 cut(s) 648
TaqI TCGA 6 cut(s) 45, 140, 287, 470, 874, 1119
TfiI GAWTC 2 cut(s) 328, 544
Tru1I TTAA 6 cut(s) 686, 827, 903, 929, 1164, 1218
Tru9I TTAA 6 cut(s) 686, 827, 903, 929, 1164, 1218
TscAI CASTG 5 cut(s) 200, 265, 528, 610, 916
TseFI GTSAC 3 cut(s) 311, 818, 911
TseI GCWGC 5 cut(s) 63, 97, 839, 859, 1007
Tsp45I GTSAC 3 cut(s) 311, 818, 911
TspDTI ATGAA 4 cut(s) 17, 125, 546, 602
TspGWI ACGGA 2 cut(s) 913, 1041
TspRI CASTG 5 cut(s) 200, 265, 528, 610, 916
Tth111I GACNNNGTC 1 cut(s) 870
VpaK11BI GGWCC 2 cut(s) 263, 985
XapI RAATTY 4 cut(s) 490, 810, 978, 1121
XceI RCATGY 2 cut(s) 277, 518
XmiI GTMKAC 1 cut(s) 140
XspI CTAG 4 cut(s) 309, 405, 864, 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.