Rorug06G0256000

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000103
Physical Location & Seq
Forward (+)
40222102 .. 40225837
3736 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0256000.1

Sequence Viewer

Length: 1494 bp
ATGCCAAAAAGGCCTTCAGACGACACACTTCAAACGACACAAGCTAAAACCATACGGGTTATTTTGACTTGTGCCTCGCAATTAAGTCATTTTCTGTCCTTCTCACTCGATCTGCTCTCTCAGCTCGACCTAGACCTCGCGAAACTGAAAACCTCAAAAACCAGCCTCTCTCATCCTCACTCAGCTCTCTCAGATCTCGATTCTCACCCTCTCCTTCGTCTTCTCGCTCTCTCGATTCTTCTTCTTAATCTCTCCCTCTTCTTCTTAGTTTCAATTTTAGGGGATGGGGACCTGTCCATCACCACAAGTCTTTCACTTCCAAGAACTAAATCACAGAGCAGGGGCGGATTCAGCCCTGACTGGGTAAGATTCAAGCCCCATCGCCGAACTCGGTTGGAGAATTGGAGCACTCCCGAGTCCCGACCCGAACACGGAAGATGGAACACAGAACACAACAACCTGCAAGGCTACAACCAGCAACCCGTCTCCGCCAGTCCGCCTCTGCAGTCTCTGAGCTTCACCTCCAGGCTCCAGGTATCTCACTATCTCTCTCTCCCTCTCCGAGCTCTGCTCCTCCTCTTCTTCTCTTCTGAGTTTCTGAATTCTAAATTTCTAATCTGTAAAATTGGTAAGGAAAAGATCGTCTCCCATTACTTGTCAGCCGTTTTCAATCTCAGCAAAGAACTCAAAGCCGCCATTGACGTGCTTCCAAGGTTTGCGTCGCGGTCCAAACGACGTTATCGTCAAGCCAAGGAGGGATTCTCCAGGCCTTATCTTCTCCAGGCCTCTACCAAGATGGCTTTGGAATCCTATACATTTGGACCGTTCAAAATCGACAGCATGGAAGTGTTTCACAGCTCTAATCTATCATATGCCTTGGATAATCTGTGCCATGTTGTTCCTGGTACCGTTCTTACTCTCTTACTCTTGGATGCTTTGATAGCTCAGATGAACAAAATACGGCAGGAGCTGCAGTCATATTCGTCAAATGGACCAATTACAATTGTGACTGGGAGTCGAACAGGTGCTAGCAGATATGGTATAATTATTGTTGCAGTAGTGGCAGGATATGGCTACTTTTGGTGGAAGGGGTGGAAACTTCCTGATATGATGTTTGCAACAAGACGTAGCTTAGCTGATGCTGGCAAGTCTTTTTCTAAACAGATTGACGGTGTCTTTTCATCGATTTCAGTCACCAAGCGACAATTATCTTCAAACTTGGATGGTGTGGACTGTAATTTAGCTGAGAGTATTGAAACTACTGTTAGGACACAACAGGAGGTTATTGAACTACAAGGAAAAACAGATTCCATCAGCACGGATTTTAGAAAAGTTCAACATGCAGTGCTGACTCTGGAAACTAAGATTAACATAATAGAAGGCAAGCAGGATTCAACTAATGACAGAGTGTGGAGGTTGTGTGACTATGCCAAGAGATTGGAAAATAGCAGAGCCACAGAACGTATTCAGGCATGTATTGAACTCTTCCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

497

Amino Acids

55.93

Weight (kDa)

9.54

Isoelectric Point (pI)

51.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1664 PF07889 344 - 463 4.9e-39 Protein of unknown function (DUF1664)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 741
Acc36I ACCTGC 1 cut(s) 468
Acc65I GGTACC 1 cut(s) 905
AccB1I GGYRCC 1 cut(s) 905
AccII CGCG 2 cut(s) 140, 724
AciI CCGC 5 cut(s) 345, 489, 497, 693, 724
AcsI RAATTY 2 cut(s) 601, 608
AfaI GTAC 1 cut(s) 907
AfiI CCNNNNNNNGG 2 cut(s) 361, 431
AhdI GACNNNNNGTC 1 cut(s) 1014
AjiI CACGTC 1 cut(s) 703
AjnI CCWGG 5 cut(s) 524, 531, 764, 780, 901
AjuI GAANNNNNNNTTGG 3 cut(s) 30, 743, 775
Alw21I GWGCWC 2 cut(s) 410, 568
Alw26I GTCTC 3 cut(s) 490, 513, 649
AlwNI CAGNNNCTG 2 cut(s) 511, 970
Ama87I CYCGRG 1 cut(s) 413
AoxI GGCC 3 cut(s) 11, 767, 783
ApeKI GCWGC 1 cut(s) 970
ApoI RAATTY 2 cut(s) 601, 608
Asp700I GAANNNNTTC 2 cut(s) 849, 1464
Asp718I GGTACC 1 cut(s) 905
AspS9I GGNCC 4 cut(s) 289, 726, 821, 992
AsuHPI GGTGA 4 cut(s) 197, 292, 511, 1186
AsuNHI GCTAGC 1 cut(s) 1028
AvaI CYCGRG 1 cut(s) 413
AvaII GGWCC 4 cut(s) 289, 726, 821, 992
BanI GGYRCC 1 cut(s) 905
BanII GRGCYC 1 cut(s) 568
BbsI GAAGAC 1 cut(s) 212
Bbv12I GWGCWC 2 cut(s) 410, 568
BbvI GCAGC 1 cut(s) 957
BccI CCATC 7 cut(s) 278, 305, 387, 432, 790, 1217, 1319
BceAI ACGGC 2 cut(s) 647, 977
BciT130I CCWGG 5 cut(s) 526, 533, 766, 782, 903
BcoDI GTCTC 3 cut(s) 490, 513, 649
BfaI CTAG 2 cut(s) 131, 1029
BfmI CTRYAG 2 cut(s) 503, 971
BfuAI ACCTGC 1 cut(s) 468
BglI GCCNNNNNGGC 1 cut(s) 10
BglII AGATCT 1 cut(s) 193
BisI GCNGC 2 cut(s) 693, 971
BlpI GCTNAGC 1 cut(s) 1132
BlsI GCNGC 2 cut(s) 694, 972
Bme1390I CCNGG 5 cut(s) 526, 533, 766, 782, 903
Bme18I GGWCC 4 cut(s) 289, 726, 821, 992
BmeRI GACNNNNNGTC 1 cut(s) 1014
BmeT110I CYCGRG 1 cut(s) 413
BmgBI CACGTC 1 cut(s) 703
BmgT120I GGNCC 4 cut(s) 289, 726, 821, 992
BmiI GGNNCC 3 cut(s) 290, 530, 907
BmrFI CCNGG 5 cut(s) 526, 533, 766, 782, 903
BmrI ACTGGG 2 cut(s) 370, 1020
BmsI GCATC 2 cut(s) 922, 1129
BmtI GCTAGC 1 cut(s) 1032
BmuI ACTGGG 2 cut(s) 370, 1020
BpiI GAAGAC 1 cut(s) 212
BplI GAGNNNNNCTC 4 cut(s) 555, 587, 746, 778
BpmI CTGGAG 4 cut(s) 508, 515, 748, 764
Bpu1102I GCTNAGC 1 cut(s) 1132
Bsa29I ATCGAT 1 cut(s) 1184
BsaJI CCNNGG 3 cut(s) 710, 750, 876
BsaXI ACNNNNNCTCC 4 cut(s) 959, 989, 1405, 1435
Bsc4I CCNNNNNNNGG 2 cut(s) 361, 431
Bse1I ACTGG 3 cut(s) 365, 492, 1015
BseBI CCWGG 5 cut(s) 526, 533, 766, 782, 903
BseCI ATCGAT 1 cut(s) 1184
BseDI CCNNGG 3 cut(s) 710, 750, 876
BseGI GGATG 4 cut(s) 172, 289, 937, 1228
BseLI CCNNNNNNNGG 2 cut(s) 361, 431
BseMII CTCAG 8 cut(s) 134, 195, 204, 503, 582, 688, 959, 1236
BseNI ACTGG 3 cut(s) 365, 492, 1015
BseRI GAGGAG 2 cut(s) 563, 566
BseXI GCAGC 1 cut(s) 957
Bsh1236I CGCG 2 cut(s) 140, 724
BshFI GGCC 3 cut(s) 13, 769, 785
BshNI GGYRCC 1 cut(s) 905
BshVI ATCGAT 1 cut(s) 1184
BsiHKAI GWGCWC 2 cut(s) 410, 568
BsiHKCI CYCGRG 1 cut(s) 413
BslFI GGGAC 2 cut(s) 302, 403
BslI CCNNNNNNNGG 2 cut(s) 361, 431
BsmAI GTCTC 3 cut(s) 490, 513, 649
BsmBI CGTCTC 2 cut(s) 490, 649
BsmFI GGGAC 2 cut(s) 302, 403
BsnI GGCC 3 cut(s) 13, 769, 785
BsoBI CYCGRG 1 cut(s) 413
Bsp1286I GDGCHC 2 cut(s) 410, 568
Bsp143I GATC 3 cut(s) 109, 193, 639
Bsp1720I GCTNAGC 1 cut(s) 1132
Bsp68I TCGCGA 1 cut(s) 140
BspACI CCGC 5 cut(s) 345, 489, 497, 693, 724
BspANI GGCC 3 cut(s) 13, 769, 785
BspCNI CTCAG 8 cut(s) 133, 194, 203, 504, 583, 687, 958, 1237
BspDI ATCGAT 1 cut(s) 1184
BspFNI CGCG 2 cut(s) 140, 724
BspLI GGNNCC 3 cut(s) 290, 530, 907
BspMAI CTGCAG 2 cut(s) 507, 975
BspMI ACCTGC 1 cut(s) 468
BspOI GCTAGC 1 cut(s) 1032
BspT107I GGYRCC 1 cut(s) 905
BsrI ACTGG 3 cut(s) 365, 492, 1015
BssECI CCNNGG 3 cut(s) 710, 750, 876
BssMI GATC 3 cut(s) 109, 193, 639
BssT1I CCWWGG 3 cut(s) 710, 750, 876
Bst2UI CCWGG 5 cut(s) 526, 533, 766, 782, 903
Bst4CI ACNGT 5 cut(s) 825, 910, 1172, 1235, 1264
Bst6I CTCTTC 4 cut(s) 263, 584, 592, 1490
BstAPI GCANNNNNTGC 1 cut(s) 970
BstC8I GCNNGC 3 cut(s) 1030, 1144, 1385
BstF5I GGATG 4 cut(s) 172, 289, 937, 1228
BstFNI CGCG 2 cut(s) 140, 724
BstKTI GATC 3 cut(s) 112, 196, 642
BstMAI GTCTC 3 cut(s) 490, 513, 649
BstMBI GATC 3 cut(s) 109, 193, 639
BstMWI GCNNNNNNNGC 6 cut(s) 10, 121, 351, 941, 970, 1061
BstNI CCWGG 5 cut(s) 526, 533, 766, 782, 903
BstNSI RCATGY 2 cut(s) 1343, 1476
BstSCI CCNGG 5 cut(s) 524, 531, 764, 780, 901
BstSFI CTRYAG 2 cut(s) 503, 971
BstUI CGCG 2 cut(s) 140, 724
BstV1I GCAGC 1 cut(s) 957
BstV2I GAAGAC 1 cut(s) 212
BstX2I RGATCY 1 cut(s) 193
BstXI CCANNNNNNTGG 1 cut(s) 1438
BstYI RGATCY 1 cut(s) 193
Bsu15I ATCGAT 1 cut(s) 1184
BsuRI GGCC 3 cut(s) 13, 769, 785
BsuTUI ATCGAT 1 cut(s) 1184
BtgZI GCGATG 1 cut(s) 365
BtrI CACGTC 1 cut(s) 703
BtsCI GGATG 4 cut(s) 172, 289, 937, 1228
BtsI GCAGTG 1 cut(s) 1350
BtsIMutI CAGTG 1 cut(s) 1350
BtuMI TCGCGA 1 cut(s) 140
BveI ACCTGC 1 cut(s) 468
Cac8I GCNNGC 3 cut(s) 1030, 1144, 1385
CaiI CAGNNNCTG 2 cut(s) 511, 970
Cfr13I GGNCC 4 cut(s) 289, 726, 821, 992
ClaI ATCGAT 1 cut(s) 1184
CseI GACGC 1 cut(s) 708
Csp6I GTAC 1 cut(s) 906
CviAII CATG 4 cut(s) 841, 893, 1340, 1473
CviQI GTAC 1 cut(s) 906
DpnI GATC 3 cut(s) 111, 195, 641
DpnII GATC 3 cut(s) 109, 193, 639
DrdI GACNNNNNNGTC 1 cut(s) 741
DriI GACNNNNNGTC 1 cut(s) 1014
DseDI GACNNNNNNGTC 1 cut(s) 741
Eam1104I CTCTTC 4 cut(s) 263, 584, 592, 1490
Eam1105I GACNNNNNGTC 1 cut(s) 1014
EarI CTCTTC 4 cut(s) 263, 584, 592, 1490
EciI GGCGGA 3 cut(s) 360, 478, 486
Ecl136II GAGCTC 1 cut(s) 566
Eco130I CCWWGG 3 cut(s) 710, 750, 876
Eco147I AGGCCT 3 cut(s) 13, 769, 785
Eco24I GRGCYC 1 cut(s) 568
Eco47I GGWCC 4 cut(s) 289, 726, 821, 992
Eco53kI GAGCTC 1 cut(s) 566
Eco88I CYCGRG 1 cut(s) 413
EcoICRI GAGCTC 1 cut(s) 566
EcoO109I RGGNCCY 1 cut(s) 289
EcoRI GAATTC 1 cut(s) 601
EcoRII CCWGG 5 cut(s) 524, 531, 764, 780, 901
EcoT14I CCWWGG 3 cut(s) 710, 750, 876
EcoT38I GRGCYC 1 cut(s) 568
ErhI CCWWGG 3 cut(s) 710, 750, 876
Esp3I CGTCTC 2 cut(s) 490, 649
FaeI CATG 4 cut(s) 844, 896, 1343, 1476
FaqI GGGAC 2 cut(s) 302, 403
FatI CATG 4 cut(s) 840, 892, 1339, 1472
FauNDI CATATG 1 cut(s) 871
Fnu4HI GCNGC 2 cut(s) 693, 971
FokI GGATG 4 cut(s) 159, 296, 944, 1235
FriOI GRGCYC 1 cut(s) 568
Fsp4HI GCNGC 2 cut(s) 693, 971
FspBI CTAG 2 cut(s) 131, 1029
GluI GCNGC 2 cut(s) 693, 971
GsuI CTGGAG 4 cut(s) 508, 515, 748, 764
HaeIII GGCC 3 cut(s) 13, 769, 785
HgaI GACGC 1 cut(s) 708
Hin1II CATG 4 cut(s) 844, 896, 1343, 1476
HphI GGTGA 4 cut(s) 197, 292, 511, 1186
Hpy166II GTNNAC 1 cut(s) 1231
Hpy188I TCNGA 7 cut(s) 19, 193, 513, 563, 592, 600, 948
Hpy188III TCNNGA 7 cut(s) 139, 197, 232, 413, 420, 1103, 1355
Hpy8I GTNNAC 1 cut(s) 1231
Hpy99I CGWCG 2 cut(s) 724, 738
HpyAV CCTTC 5 cut(s) 24, 109, 224, 1081, 1373
HpyCH4III ACNGT 5 cut(s) 825, 910, 1172, 1235, 1264
HpyCH4IV ACGT 4 cut(s) 702, 736, 1126, 1462
HpyCH4V TGCA 6 cut(s) 463, 505, 973, 1055, 1118, 1343
HpyF10VI GCNNNNNNNGC 6 cut(s) 10, 121, 351, 941, 970, 1061
HpySE526I ACGT 4 cut(s) 702, 736, 1126, 1462
Hsp92II CATG 4 cut(s) 844, 896, 1343, 1476
KpnI GGTACC 1 cut(s) 909
Kzo9I GATC 3 cut(s) 109, 193, 639
LmnI GCTCC 4 cut(s) 405, 534, 576, 967
Lsp1109I GCAGC 1 cut(s) 957
LweI GCATC 2 cut(s) 922, 1129
MaeI CTAG 2 cut(s) 131, 1029
MaeII ACGT 4 cut(s) 702, 736, 1126, 1462
MaeIII GTNAC 3 cut(s) 1006, 1192, 1421
MalI GATC 3 cut(s) 111, 195, 641
MboI GATC 3 cut(s) 109, 193, 639
MfeI CAATTG 1 cut(s) 1002
MflI RGATCY 1 cut(s) 193
MhlI GDGCHC 2 cut(s) 410, 568
MlyI GAGTC 3 cut(s) 425, 1024, 1345
MmeI TCCRAC 1 cut(s) 375
MroXI GAANNNNTTC 2 cut(s) 849, 1464
MseI TTAA 3 cut(s) 83, 246, 1368
MslI CAYNNNNRTG 2 cut(s) 701, 845
MspR9I CCNGG 5 cut(s) 526, 533, 766, 782, 903
MunI CAATTG 1 cut(s) 1002
MvaI CCWGG 5 cut(s) 526, 533, 766, 782, 903
MvnI CGCG 2 cut(s) 140, 724
MwoI GCNNNNNNNGC 6 cut(s) 10, 121, 351, 941, 970, 1061
NdeI CATATG 1 cut(s) 871
NdeII GATC 3 cut(s) 109, 193, 639
NheI GCTAGC 1 cut(s) 1028
NlaIII CATG 4 cut(s) 844, 896, 1343, 1476
NlaIV GGNNCC 3 cut(s) 290, 530, 907
NmuCI GTSAC 3 cut(s) 1006, 1192, 1421
NruI TCGCGA 1 cut(s) 140
NspI RCATGY 2 cut(s) 1343, 1476
PceI AGGCCT 3 cut(s) 13, 769, 785
PcsI WCGNNNNNNNCGW 1 cut(s) 739
PdmI GAANNNNTTC 2 cut(s) 849, 1464
PfeI GAWTC 8 cut(s) 200, 235, 348, 369, 759, 806, 1307, 1391
PflFI GACNNNGTC 1 cut(s) 1172
PkrI GCNGC 2 cut(s) 694, 972
PleI GAGTC 3 cut(s) 424, 1023, 1345
PpsI GAGTC 3 cut(s) 424, 1023, 1345
PpuMI RGGWCCY 1 cut(s) 289
Psp124BI GAGCTC 1 cut(s) 568
Psp5II RGGWCCY 1 cut(s) 289
Psp6I CCWGG 5 cut(s) 524, 531, 764, 780, 901
PspGI CCWGG 5 cut(s) 524, 531, 764, 780, 901
PspN4I GGNNCC 3 cut(s) 290, 530, 907
PspPI GGNCC 4 cut(s) 289, 726, 821, 992
PspPPI RGGWCCY 1 cut(s) 289
PstI CTGCAG 2 cut(s) 507, 975
PstNI CAGNNNCTG 2 cut(s) 511, 970
PsuI RGATCY 1 cut(s) 193
PsyI GACNNNGTC 1 cut(s) 1172
RruI TCGCGA 1 cut(s) 140
RsaI GTAC 1 cut(s) 907
RsaNI GTAC 1 cut(s) 906
RseI CAYNNNNRTG 2 cut(s) 701, 845
SacI GAGCTC 1 cut(s) 568
SaqAI TTAA 3 cut(s) 83, 246, 1368
SatI GCNGC 2 cut(s) 693, 971
Sau3AI GATC 3 cut(s) 109, 193, 639
Sau96I GGNCC 4 cut(s) 289, 726, 821, 992
SchI GAGTC 3 cut(s) 425, 1024, 1345
ScrFI CCNGG 5 cut(s) 526, 533, 766, 782, 903
SduI GDGCHC 2 cut(s) 410, 568
SfaNI GCATC 2 cut(s) 922, 1129
SfcI CTRYAG 2 cut(s) 503, 971
SinI GGWCC 4 cut(s) 289, 726, 821, 992
SmiMI CAYNNNNRTG 2 cut(s) 701, 845
SseBI AGGCCT 3 cut(s) 13, 769, 785
SsiI CCGC 5 cut(s) 345, 489, 497, 693, 724
SspMI CTAG 2 cut(s) 131, 1029
SstI GAGCTC 1 cut(s) 568
StuI AGGCCT 3 cut(s) 13, 769, 785
StyD4I CCNGG 5 cut(s) 524, 531, 764, 780, 901
StyI CCWWGG 3 cut(s) 710, 750, 876
TaaI ACNGT 5 cut(s) 825, 910, 1172, 1235, 1264
TaiI ACGT 4 cut(s) 705, 739, 1129, 1465
TaqI TCGA 7 cut(s) 108, 126, 198, 233, 834, 1018, 1184
TauI GCSGC 1 cut(s) 695
TfiI GAWTC 8 cut(s) 200, 235, 348, 369, 759, 806, 1307, 1391
Tru1I TTAA 3 cut(s) 83, 246, 1368
Tru9I TTAA 3 cut(s) 83, 246, 1368
TscAI CASTG 1 cut(s) 1350
TseFI GTSAC 3 cut(s) 1006, 1192, 1421
TseI GCWGC 1 cut(s) 970
Tsp45I GTSAC 3 cut(s) 1006, 1192, 1421
TspDTI ATGAA 2 cut(s) 965, 1170
TspGWI ACGGA 2 cut(s) 447, 1334
TspRI CASTG 1 cut(s) 1350
Tth111I GACNNNGTC 1 cut(s) 1172
VpaK11BI GGWCC 4 cut(s) 289, 726, 821, 992
XapI RAATTY 2 cut(s) 601, 608
XceI RCATGY 2 cut(s) 1343, 1476
XcmI CCANNNNNNNNNTGG 2 cut(s) 799, 899
XmnI GAANNNNTTC 2 cut(s) 849, 1464
XspI CTAG 2 cut(s) 131, 1029
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.