F-box FBD LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| LRR_At1g61320_AtMIF1 | PF23622 | 2 - 209 | 4e-07 | At1g61320/AtMIF1, LRR domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 275, 536 |
| AciI | CCGC | 2 cut(s) | 172, 612 |
| AcsI | RAATTY | 3 cut(s) | 152, 469, 563 |
| AcuI | CTGAAG | 1 cut(s) | 590 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 617 |
| AflII | CTTAAG | 1 cut(s) | 200 |
| AgsI | TTSAA | 6 cut(s) | 8, 22, 131, 157, 189, 239 |
| AjnI | CCWGG | 1 cut(s) | 283 |
| AluBI | AGCT | 7 cut(s) | 292, 339, 387, 395, 406, 545, 680 |
| AluI | AGCT | 7 cut(s) | 292, 339, 387, 395, 406, 545, 680 |
| ApeKI | GCWGC | 2 cut(s) | 269, 292 |
| ApoI | RAATTY | 3 cut(s) | 152, 469, 563 |
| AseI | ATTAAT | 1 cut(s) | 305 |
| AspS9I | GGNCC | 2 cut(s) | 652, 697 |
| AsuHPI | GGTGA | 5 cut(s) | 101, 206, 458, 490, 573 |
| AvaII | GGWCC | 2 cut(s) | 652, 697 |
| BanI | GGYRCC | 2 cut(s) | 275, 536 |
| BauI | CACGAG | 1 cut(s) | 244 |
| BbvI | GCAGC | 2 cut(s) | 256, 279 |
| BccI | CCATC | 2 cut(s) | 425, 617 |
| BciT130I | CCWGG | 1 cut(s) | 285 |
| BclI | TGATCA | 1 cut(s) | 558 |
| BfaI | CTAG | 3 cut(s) | 350, 407, 551 |
| BfmI | CTRYAG | 1 cut(s) | 398 |
| BfrI | CTTAAG | 1 cut(s) | 200 |
| BisI | GCNGC | 2 cut(s) | 270, 293 |
| BlsI | GCNGC | 2 cut(s) | 271, 294 |
| Bme1390I | CCNGG | 1 cut(s) | 285 |
| Bme18I | GGWCC | 2 cut(s) | 652, 697 |
| BmgT120I | GGNCC | 2 cut(s) | 652, 697 |
| BmiI | GGNNCC | 3 cut(s) | 277, 538, 699 |
| BmrFI | CCNGG | 1 cut(s) | 285 |
| BmsI | GCATC | 2 cut(s) | 46, 537 |
| BpmI | CTGGAG | 1 cut(s) | 639 |
| BpuEI | CTTGAG | 1 cut(s) | 53 |
| BsaBI | GATNNNNATC | 1 cut(s) | 105 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 617 |
| Bse1I | ACTGG | 1 cut(s) | 655 |
| Bse3DI | GCAATG | 1 cut(s) | 37 |
| Bse8I | GATNNNNATC | 1 cut(s) | 105 |
| BseBI | CCWGG | 1 cut(s) | 285 |
| BseGI | GGATG | 2 cut(s) | 442, 603 |
| BseJI | GATNNNNATC | 1 cut(s) | 105 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 617 |
| BseMI | GCAATG | 1 cut(s) | 37 |
| BseMII | CTCAG | 1 cut(s) | 672 |
| BseNI | ACTGG | 1 cut(s) | 655 |
| BseRI | GAGGAG | 1 cut(s) | 368 |
| BseXI | GCAGC | 2 cut(s) | 256, 279 |
| BseYI | CCCAGC | 1 cut(s) | 391 |
| BshNI | GGYRCC | 2 cut(s) | 275, 536 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 617 |
| Bsp143I | GATC | 3 cut(s) | 346, 558, 592 |
| BspACI | CCGC | 2 cut(s) | 172, 612 |
| BspCNI | CTCAG | 1 cut(s) | 673 |
| BspLI | GGNNCC | 3 cut(s) | 277, 538, 699 |
| BspT107I | GGYRCC | 2 cut(s) | 275, 536 |
| BspTI | CTTAAG | 1 cut(s) | 200 |
| BsrDI | GCAATG | 1 cut(s) | 37 |
| BsrI | ACTGG | 1 cut(s) | 655 |
| BssMI | GATC | 3 cut(s) | 346, 558, 592 |
| BssSI | CACGAG | 1 cut(s) | 244 |
| Bst2BI | CACGAG | 1 cut(s) | 244 |
| Bst2UI | CCWGG | 1 cut(s) | 285 |
| Bst4CI | ACNGT | 1 cut(s) | 425 |
| Bst6I | CTCTTC | 1 cut(s) | 609 |
| BstAFI | CTTAAG | 1 cut(s) | 200 |
| BstC8I | GCNNGC | 3 cut(s) | 612, 666, 678 |
| BstDEI | CTNAG | 1 cut(s) | 681 |
| BstF5I | GGATG | 2 cut(s) | 442, 603 |
| BstKTI | GATC | 3 cut(s) | 349, 561, 595 |
| BstMBI | GATC | 3 cut(s) | 346, 558, 592 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 189, 275, 289 |
| BstNI | CCWGG | 1 cut(s) | 285 |
| BstSCI | CCNGG | 1 cut(s) | 283 |
| BstSFI | CTRYAG | 1 cut(s) | 398 |
| BstV1I | GCAGC | 2 cut(s) | 256, 279 |
| BtsCI | GGATG | 2 cut(s) | 442, 603 |
| BtsI | GCAGTG | 1 cut(s) | 141 |
| BtsIMutI | CAGTG | 2 cut(s) | 141, 342 |
| Cac8I | GCNNGC | 3 cut(s) | 612, 666, 678 |
| Cfr13I | GGNCC | 2 cut(s) | 652, 697 |
| CviAII | CATG | 1 cut(s) | 702 |
| CviJI | RGCY | 9 cut(s) | 269, 292, 339, 387, 395, 406, 545, 610, 680 |
| CviKI_1 | RGCY | 9 cut(s) | 269, 292, 339, 387, 395, 406, 545, 610, 680 |
| DdeI | CTNAG | 1 cut(s) | 681 |
| DpnI | GATC | 3 cut(s) | 348, 560, 594 |
| DpnII | GATC | 3 cut(s) | 346, 558, 592 |
| DraI | TTTAAA | 1 cut(s) | 258 |
| Eam1104I | CTCTTC | 1 cut(s) | 609 |
| EarI | CTCTTC | 1 cut(s) | 609 |
| Eco47I | GGWCC | 2 cut(s) | 652, 697 |
| Eco57I | CTGAAG | 1 cut(s) | 590 |
| EcoRI | GAATTC | 1 cut(s) | 152 |
| EcoRII | CCWGG | 1 cut(s) | 283 |
| FaeI | CATG | 1 cut(s) | 705 |
| FaiI | YATR | 9 cut(s) | 53, 135, 220, 310, 329, 373, 380, 515, 703 |
| FatI | CATG | 1 cut(s) | 701 |
| FauI | CCCGC | 2 cut(s) | 165, 619 |
| FbaI | TGATCA | 1 cut(s) | 558 |
| Fnu4HI | GCNGC | 2 cut(s) | 270, 293 |
| FokI | GGATG | 2 cut(s) | 449, 610 |
| Fsp4HI | GCNGC | 2 cut(s) | 270, 293 |
| FspBI | CTAG | 3 cut(s) | 350, 407, 551 |
| GluI | GCNGC | 2 cut(s) | 270, 293 |
| GsaI | CCCAGC | 1 cut(s) | 395 |
| GsuI | CTGGAG | 1 cut(s) | 639 |
| Hin1II | CATG | 1 cut(s) | 705 |
| HindIII | AAGCTT | 1 cut(s) | 337 |
| HinfI | GANTC | 2 cut(s) | 124, 601 |
| HphI | GGTGA | 5 cut(s) | 101, 206, 458, 490, 573 |
| Hpy166II | GTNNAC | 6 cut(s) | 139, 214, 421, 454, 498, 581 |
| Hpy188I | TCNGA | 4 cut(s) | 114, 123, 315, 597 |
| Hpy188III | TCNNGA | 5 cut(s) | 128, 236, 244, 350, 618 |
| Hpy8I | GTNNAC | 6 cut(s) | 139, 214, 421, 454, 498, 581 |
| HpyCH4III | ACNGT | 1 cut(s) | 425 |
| HpyCH4V | TGCA | 4 cut(s) | 30, 59, 528, 676 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 189, 275, 289 |
| HpyF3I | CTNAG | 1 cut(s) | 681 |
| Hsp92II | CATG | 1 cut(s) | 705 |
| Ksp22I | TGATCA | 1 cut(s) | 558 |
| Kzo9I | GATC | 3 cut(s) | 346, 558, 592 |
| LmnI | GCTCC | 2 cut(s) | 392, 403 |
| Lsp1109I | GCAGC | 2 cut(s) | 256, 279 |
| LweI | GCATC | 2 cut(s) | 46, 537 |
| MaeI | CTAG | 3 cut(s) | 350, 407, 551 |
| MaeIII | GTNAC | 3 cut(s) | 221, 248, 425 |
| MalI | GATC | 3 cut(s) | 348, 560, 594 |
| MboI | GATC | 3 cut(s) | 346, 558, 592 |
| MboII | GAAGA | 3 cut(s) | 101, 596, 682 |
| MluCI | AATT | 5 cut(s) | 152, 193, 469, 487, 563 |
| MlyI | GAGTC | 1 cut(s) | 595 |
| MnlI | CCTC | 6 cut(s) | 79, 91, 346, 386, 503, 679 |
| MseI | TTAA | 7 cut(s) | 105, 201, 257, 305, 464, 575, 641 |
| MspCI | CTTAAG | 1 cut(s) | 200 |
| MspR9I | CCNGG | 1 cut(s) | 285 |
| MvaI | CCWGG | 1 cut(s) | 285 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 189, 275, 289 |
| NdeII | GATC | 3 cut(s) | 346, 558, 592 |
| NlaIII | CATG | 1 cut(s) | 705 |
| NlaIV | GGNNCC | 3 cut(s) | 277, 538, 699 |
| NmuCI | GTSAC | 2 cut(s) | 221, 425 |
| PfeI | GAWTC | 1 cut(s) | 124 |
| PkrI | GCNGC | 2 cut(s) | 271, 294 |
| PleI | GAGTC | 1 cut(s) | 595 |
| PpsI | GAGTC | 1 cut(s) | 595 |
| PshBI | ATTAAT | 1 cut(s) | 305 |
| Psp6I | CCWGG | 1 cut(s) | 283 |
| PspFI | CCCAGC | 1 cut(s) | 391 |
| PspGI | CCWGG | 1 cut(s) | 283 |
| PspN4I | GGNNCC | 3 cut(s) | 277, 538, 699 |
| PspPI | GGNCC | 2 cut(s) | 652, 697 |
| SaqAI | TTAA | 7 cut(s) | 105, 201, 257, 305, 464, 575, 641 |
| SatI | GCNGC | 2 cut(s) | 270, 293 |
| Sau3AI | GATC | 3 cut(s) | 346, 558, 592 |
| Sau96I | GGNCC | 2 cut(s) | 652, 697 |
| SchI | GAGTC | 1 cut(s) | 595 |
| ScrFI | CCNGG | 1 cut(s) | 285 |
| SfaNI | GCATC | 2 cut(s) | 46, 537 |
| SfcI | CTRYAG | 1 cut(s) | 398 |
| SinI | GGWCC | 2 cut(s) | 652, 697 |
| SmlI | CTYRAG | 2 cut(s) | 68, 200 |
| SmoI | CTYRAG | 2 cut(s) | 68, 200 |
| Sse9I | AATT | 5 cut(s) | 152, 193, 469, 487, 563 |
| SsiI | CCGC | 2 cut(s) | 172, 612 |
| SspMI | CTAG | 3 cut(s) | 350, 407, 551 |
| StyD4I | CCNGG | 1 cut(s) | 283 |
| TaaI | ACNGT | 1 cut(s) | 425 |
| TaqI | TCGA | 3 cut(s) | 229, 485, 508 |
| TasI | AATT | 5 cut(s) | 152, 193, 469, 487, 563 |
| TfiI | GAWTC | 1 cut(s) | 124 |
| Tru1I | TTAA | 7 cut(s) | 105, 201, 257, 305, 464, 575, 641 |
| Tru9I | TTAA | 7 cut(s) | 105, 201, 257, 305, 464, 575, 641 |
| TscAI | CASTG | 2 cut(s) | 148, 349 |
| TseFI | GTSAC | 2 cut(s) | 221, 425 |
| TseI | GCWGC | 2 cut(s) | 269, 292 |
| Tsp45I | GTSAC | 2 cut(s) | 221, 425 |
| TspRI | CASTG | 2 cut(s) | 148, 349 |
| Vha464I | CTTAAG | 1 cut(s) | 200 |
| VpaK11BI | GGWCC | 2 cut(s) | 652, 697 |
| VspI | ATTAAT | 1 cut(s) | 305 |
| XapI | RAATTY | 3 cut(s) | 152, 469, 563 |
| XbaI | TCTAGA | 1 cut(s) | 349 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 428 |
| XspI | CTAG | 3 cut(s) | 350, 407, 551 |