Rroxscaffold_7G00171950

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000103
Physical Location & Seq
Reverse (-)
12304341 .. 12307428
3088 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00171950.1

Sequence Viewer

Length: 1356 bp
ATGCAAGACCGCCCCGCCATGACTGTCATGCGTGATCCGAAGCCAAAGACGACCCGTGTCCCCATTCAATCTAGCACCAAGAAGGCTTCGCAAAGAGATGGAACGGAAAATTTTACGGCGGCGCAACGTGTGTTGGAAAATATGATTCGTTGTTGTCCTCTTCTTGAGAGATTCACTTTGAATGACCGTGATGGTTTCATCCAACTTAAGATCGAAGGGAATGATGCACCGAATCTACAGTTCCTTTACATCTACGGTTCTTTTGAGGATTTTAGTGTTGTGAATGCGTTTAATATTGCTGATATTTCTATTGAAGGATCTTCCAAGTCCTGTTTGAATATGGAGGTGGACTTGGATAGAATCAGCAACTTACCGAATGAGGTGATAGACAAAATATTGTCAAGTTTGCCATTGAAGGACGGAGCGAGGACGAGTATTTTGTCAAGCAAGTGGAGGTGCAAATTCGCTATGCTTCCACGTCTGGCGTTTGATCATCAGTGCACCTCCAAGATTGTTGATCATGTACTCTTAAGTCACATTGGCCCGATAAGCAAGTTTAAGCTTAGTCAAGGATCCAAAGACATCAAAGATATTGATCGGTGGATTCTTCACCTGTCAAGACACCCTATCAATGAGTTGATACTCAACTTTTCTGTAAGGCCGCGCTACAAGATGCCTTCATGCTTCAGGAGTTTGAAAAGGCTTGTCATTAAGCGTGTTACGCTGGCCCAAGATGTGTTGGAAAATATGATTATTTGTTCTCCTCTGCTTGAGAGGTTGACTTTGAAGAACTGTGACGGTTTCAGACAACTCAAGATTGATGCACCCAATCTTCAATTCCTTCTCTGTAGTGGTGTTTTTGAAGATTTCAGTATTGTGAATACTTTGAAACTTGCTGTTGTTTACATTCATTTAGTAAACCGACCAGTTTGTCATAGTTCTAGAAATTTGCTCAAGTTTTTTGTCGACCTGCCTCAGGTTCAGAGTCTCCATATTAATTGGTTCTGTGGAGGAGGTTTCAACTGCTCTTTGCCTTCTGAGAAGCTCCCTGCTCTAGAAACACTAAATATTAAAGCTATGAAGTGTCAAGATCAAGCTGAGGGAGGAGATTACTCTTGGCTGGACGTTTGTTCATTCACCCAACTCCGACATGTGAAAATACAGCAGATATCTGGCGTTGAAGCTGAACTGGATATTATCAGATTTCTGCTTATAAGTTCACCAGTACTTGAGACAATGACTGTTGTGCCTGCGGAGCCTGATGCTGCTGATGAAAATCCAGATCTAGTTGTTCTCCAAAATTCTTTTGATGTATCTAAAAATTGCTCCGGTTCAGGCGTGCCTCACCGAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

451

Amino Acids

50.92

Weight (kDa)

8.12

Isoelectric Point (pI)

42.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 210 - 415 1.6e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 225 - 303 4.8e-09 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1214
AasI GACNNNNNNGTC 1 cut(s) 930
Acc36I ACCTGC 1 cut(s) 978
AccI GTMKAC 1 cut(s) 966
AccII CGCG 1 cut(s) 664
AciI CCGC 5 cut(s) 10, 15, 119, 662, 1253
AclWI GGATC 4 cut(s) 29, 325, 567, 580
AcsI RAATTY 4 cut(s) 109, 461, 946, 1300
AcuI CTGAAG 1 cut(s) 670
AfaI GTAC 2 cut(s) 525, 1227
AfiI CCNNNNNNNGG 1 cut(s) 976
AflII CTTAAG 2 cut(s) 206, 529
AflIII ACRYGT 2 cut(s) 127, 1150
AjiI CACGTC 1 cut(s) 479
AjuI GAANNNNNNNTTGG 2 cut(s) 821, 853
AluBI AGCT 5 cut(s) 562, 1045, 1076, 1097, 1184
AluI AGCT 5 cut(s) 562, 1045, 1076, 1097, 1184
Alw21I GWGCWC 1 cut(s) 503
Alw26I GTCTC 2 cut(s) 992, 1226
Alw44I GTGCAC 1 cut(s) 499
AlwI GGATC 4 cut(s) 29, 325, 567, 580
AoxI GGCC 3 cut(s) 541, 659, 726
ApaLI GTGCAC 1 cut(s) 499
ApeKI GCWGC 1 cut(s) 1265
ApoI RAATTY 4 cut(s) 109, 461, 946, 1300
ArsI GACNNNNNNTTYG 2 cut(s) 421, 453
AseI ATTAAT 1 cut(s) 996
AspLEI GCGC 2 cut(s) 124, 666
AspS9I GGNCC 2 cut(s) 542, 727
AsuHPI GGTGA 5 cut(s) 394, 602, 1129, 1212, 1337
AxyI CCTNAGG 1 cut(s) 975
BaeGI GKGCMC 1 cut(s) 503
BamHI GGATCC 1 cut(s) 572
Bbv12I GWGCWC 1 cut(s) 503
BbvCI CCTCAGC 1 cut(s) 1098
BbvI GCAGC 1 cut(s) 1252
BccI CCATC 2 cut(s) 92, 185
BceAI ACGGC 1 cut(s) 132
BclI TGATCA 2 cut(s) 490, 517
BcoDI GTCTC 2 cut(s) 992, 1226
BfaI CTAG 5 cut(s) 72, 942, 1055, 1286, 1354
BfmI CTRYAG 2 cut(s) 236, 847
BfrI CTTAAG 2 cut(s) 206, 529
BfuAI ACCTGC 1 cut(s) 978
BglII AGATCT 1 cut(s) 1282
BisI GCNGC 3 cut(s) 120, 662, 1266
BlsI GCNGC 3 cut(s) 121, 663, 1267
BmcAI AGTACT 1 cut(s) 1227
BmgBI CACGTC 1 cut(s) 479
BmgT120I GGNCC 2 cut(s) 542, 727
BmiI GGNNCC 2 cut(s) 574, 1257
BmsI GCATC 4 cut(s) 214, 663, 811, 1252
BoxI GACNNNNGTC 1 cut(s) 56
Bpu10I CCTNAGC 1 cut(s) 1098
BpuEI CTTGAG 5 cut(s) 185, 791, 797, 938, 1250
BsaBI GATNNNNATC 2 cut(s) 594, 1275
BsaWI WCCGGW 1 cut(s) 1328
Bsc4I CCNNNNNNNGG 1 cut(s) 976
Bse1I ACTGG 3 cut(s) 926, 1194, 1223
Bse21I CCTNAGG 1 cut(s) 975
Bse8I GATNNNNATC 2 cut(s) 594, 1275
BseGI GGATG 1 cut(s) 198
BseJI GATNNNNATC 2 cut(s) 594, 1275
BseLI CCNNNNNNNGG 1 cut(s) 976
BseMII CTCAG 3 cut(s) 989, 1029, 1089
BseNI ACTGG 3 cut(s) 926, 1194, 1223
BseRI GAGGAG 3 cut(s) 753, 1026, 1119
BseSI GKGCMC 1 cut(s) 503
BseXI GCAGC 1 cut(s) 1252
Bsh1236I CGCG 1 cut(s) 664
BshFI GGCC 3 cut(s) 543, 661, 728
BsiHKAI GWGCWC 1 cut(s) 503
BsiSI CCGG 1 cut(s) 1329
BslFI GGGAC 1 cut(s) 44
BslI CCNNNNNNNGG 1 cut(s) 976
BsmAI GTCTC 2 cut(s) 992, 1226
BsmFI GGGAC 1 cut(s) 44
BsmI GAATGC 1 cut(s) 289
BsnI GGCC 3 cut(s) 543, 661, 728
Bsp1286I GDGCHC 1 cut(s) 503
Bsp143I GATC 9 cut(s) 34, 210, 317, 490, 517, 572, 595, 1090, 1282
BspACI CCGC 5 cut(s) 10, 15, 119, 662, 1253
BspANI GGCC 3 cut(s) 543, 661, 728
BspCNI CTCAG 3 cut(s) 988, 1030, 1090
BspFNI CGCG 1 cut(s) 664
BspLI GGNNCC 2 cut(s) 574, 1257
BspMI ACCTGC 1 cut(s) 978
BspPI GGATC 4 cut(s) 29, 325, 567, 580
BspTI CTTAAG 2 cut(s) 206, 529
BsrI ACTGG 3 cut(s) 926, 1194, 1223
BssMI GATC 9 cut(s) 34, 210, 317, 490, 517, 572, 595, 1090, 1282
Bst4CI ACNGT 7 cut(s) 25, 188, 240, 257, 794, 800, 1243
Bst6I CTCTTC 1 cut(s) 165
BstAFI CTTAAG 2 cut(s) 206, 529
BstC8I GCNNGC 3 cut(s) 726, 1251, 1340
BstDEI CTNAG 4 cut(s) 563, 975, 1038, 1098
BstENI CCTNNNNNAGG 1 cut(s) 974
BstF5I GGATG 1 cut(s) 198
BstFNI CGCG 1 cut(s) 664
BstHHI GCGC 2 cut(s) 124, 666
BstKTI GATC 9 cut(s) 37, 213, 320, 493, 520, 575, 598, 1093, 1285
BstMAI GTCTC 2 cut(s) 992, 1226
BstMBI GATC 9 cut(s) 34, 210, 317, 490, 517, 572, 595, 1090, 1282
BstMWI GCNNNNNNNGC 3 cut(s) 549, 721, 1255
BstNSI RCATGY 1 cut(s) 1154
BstPAI GACNNNNGTC 1 cut(s) 56
BstSFI CTRYAG 2 cut(s) 236, 847
BstSLI GKGCMC 1 cut(s) 503
BstUI CGCG 1 cut(s) 664
BstV1I GCAGC 1 cut(s) 1252
BstX2I RGATCY 3 cut(s) 317, 572, 1282
BstYI RGATCY 3 cut(s) 317, 572, 1282
Bsu36I CCTNAGG 1 cut(s) 975
BsuRI GGCC 3 cut(s) 543, 661, 728
BtrI CACGTC 1 cut(s) 479
BtsCI GGATG 1 cut(s) 198
BtsIMutI CAGTG 1 cut(s) 503
BveI ACCTGC 1 cut(s) 978
Cac8I GCNNGC 3 cut(s) 726, 1251, 1340
CfoI GCGC 2 cut(s) 124, 666
Cfr13I GGNCC 2 cut(s) 542, 727
Csp6I GTAC 2 cut(s) 524, 1226
CviAII CATG 5 cut(s) 19, 28, 521, 681, 1151
CviQI GTAC 2 cut(s) 524, 1226
DdeI CTNAG 4 cut(s) 563, 975, 1038, 1098
DpnI GATC 9 cut(s) 36, 212, 319, 492, 519, 574, 597, 1092, 1284
DpnII GATC 9 cut(s) 34, 210, 317, 490, 517, 572, 595, 1090, 1282
DrdI GACNNNNNNGTC 1 cut(s) 930
DseDI GACNNNNNNGTC 1 cut(s) 930
Eam1104I CTCTTC 1 cut(s) 165
EarI CTCTTC 1 cut(s) 165
Eco32I GATATC 1 cut(s) 1170
Eco57I CTGAAG 1 cut(s) 670
Eco81I CCTNAGG 1 cut(s) 975
EcoNI CCTNNNNNAGG 1 cut(s) 974
EcoRV GATATC 1 cut(s) 1170
FaeI CATG 5 cut(s) 22, 31, 524, 684, 1154
FaqI GGGAC 1 cut(s) 44
FatI CATG 5 cut(s) 18, 27, 520, 680, 1150
FauI CCCGC 1 cut(s) 22
FbaI TGATCA 2 cut(s) 490, 517
FblI GTMKAC 1 cut(s) 966
Fnu4HI GCNGC 3 cut(s) 120, 662, 1266
FokI GGATG 1 cut(s) 185
Fsp4HI GCNGC 3 cut(s) 120, 662, 1266
FspBI CTAG 5 cut(s) 72, 942, 1055, 1286, 1354
GlaI GCGC 2 cut(s) 123, 665
GluI GCNGC 3 cut(s) 120, 662, 1266
HaeIII GGCC 3 cut(s) 543, 661, 728
HapII CCGG 1 cut(s) 1329
HhaI GCGC 2 cut(s) 124, 666
Hin1II CATG 5 cut(s) 22, 31, 524, 684, 1154
Hin6I GCGC 2 cut(s) 122, 664
HinP1I GCGC 2 cut(s) 122, 664
HincII GTYRAC 2 cut(s) 780, 967
HindII GTYRAC 2 cut(s) 780, 967
HindIII AAGCTT 1 cut(s) 560
HinfI GANTC 7 cut(s) 145, 171, 232, 360, 604, 985, 1350
HpaII CCGG 1 cut(s) 1329
HphI GGTGA 5 cut(s) 394, 602, 1129, 1212, 1337
Hpy166II GTNNAC 7 cut(s) 349, 501, 780, 904, 919, 967, 1220
Hpy188I TCNGA 6 cut(s) 39, 806, 984, 1039, 1148, 1202
Hpy188III TCNNGA 8 cut(s) 164, 618, 688, 814, 942, 1055, 1088, 1280
Hpy8I GTNNAC 7 cut(s) 349, 501, 780, 904, 919, 967, 1220
HpyAV CCTTC 7 cut(s) 76, 209, 308, 409, 687, 851, 1044
HpyCH4III ACNGT 7 cut(s) 25, 188, 240, 257, 794, 800, 1243
HpyCH4IV ACGT 3 cut(s) 127, 478, 1125
HpyCH4V TGCA 5 cut(s) 4, 227, 459, 501, 824
HpyF10VI GCNNNNNNNGC 3 cut(s) 549, 721, 1255
HpyF3I CTNAG 4 cut(s) 563, 975, 1038, 1098
HpySE526I ACGT 3 cut(s) 127, 478, 1125
Hsp92II CATG 5 cut(s) 22, 31, 524, 684, 1154
HspAI GCGC 2 cut(s) 122, 664
Ksp22I TGATCA 2 cut(s) 490, 517
Kzo9I GATC 9 cut(s) 34, 210, 317, 490, 517, 572, 595, 1090, 1282
LmnI GCTCC 4 cut(s) 422, 1050, 1255, 1331
Lsp1109I GCAGC 1 cut(s) 1252
LweI GCATC 4 cut(s) 214, 663, 811, 1252
MaeI CTAG 5 cut(s) 72, 942, 1055, 1286, 1354
MaeII ACGT 3 cut(s) 127, 478, 1125
MaeIII GTNAC 3 cut(s) 533, 718, 794
MalI GATC 9 cut(s) 36, 212, 319, 492, 519, 574, 597, 1092, 1284
MboI GATC 9 cut(s) 34, 210, 317, 490, 517, 572, 595, 1090, 1282
MboII GAAGA 6 cut(s) 152, 312, 599, 799, 824, 875
MflI RGATCY 3 cut(s) 317, 572, 1282
MhlI GDGCHC 1 cut(s) 503
MluCI AATT 7 cut(s) 109, 461, 836, 946, 997, 1300, 1321
MlyI GAGTC 1 cut(s) 994
MmeI TCCRAC 4 cut(s) 114, 226, 720, 1171
MseI TTAA 7 cut(s) 207, 291, 530, 558, 711, 996, 1071
MspCI CTTAAG 2 cut(s) 206, 529
MspI CCGG 1 cut(s) 1329
Mva1269I GAATGC 1 cut(s) 289
MvnI CGCG 1 cut(s) 664
MwoI GCNNNNNNNGC 3 cut(s) 549, 721, 1255
NdeII GATC 9 cut(s) 34, 210, 317, 490, 517, 572, 595, 1090, 1282
NlaIII CATG 5 cut(s) 22, 31, 524, 684, 1154
NlaIV GGNNCC 2 cut(s) 574, 1257
NmuCI GTSAC 2 cut(s) 533, 794
NspI RCATGY 1 cut(s) 1154
PciI ACATGT 1 cut(s) 1150
PctI GAATGC 1 cut(s) 289
PfeI GAWTC 6 cut(s) 145, 171, 232, 360, 604, 1350
PkrI GCNGC 3 cut(s) 121, 663, 1267
PleI GAGTC 1 cut(s) 993
PpsI GAGTC 1 cut(s) 993
PscI ACATGT 1 cut(s) 1150
PshAI GACNNNNGTC 1 cut(s) 56
PshBI ATTAAT 1 cut(s) 996
PsiI TTATAA 1 cut(s) 1214
PspN4I GGNNCC 2 cut(s) 574, 1257
PspPI GGNCC 2 cut(s) 542, 727
PsuI RGATCY 3 cut(s) 317, 572, 1282
RsaI GTAC 2 cut(s) 525, 1227
RsaNI GTAC 2 cut(s) 524, 1226
SalI GTCGAC 1 cut(s) 965
SaqAI TTAA 7 cut(s) 207, 291, 530, 558, 711, 996, 1071
SatI GCNGC 3 cut(s) 120, 662, 1266
Sau3AI GATC 9 cut(s) 34, 210, 317, 490, 517, 572, 595, 1090, 1282
Sau96I GGNCC 2 cut(s) 542, 727
ScaI AGTACT 1 cut(s) 1227
SchI GAGTC 1 cut(s) 994
SduI GDGCHC 1 cut(s) 503
SfaNI GCATC 4 cut(s) 214, 663, 811, 1252
SfcI CTRYAG 2 cut(s) 236, 847
SmlI CTYRAG 7 cut(s) 164, 206, 529, 770, 812, 953, 1229
SmoI CTYRAG 7 cut(s) 164, 206, 529, 770, 812, 953, 1229
Sse9I AATT 7 cut(s) 109, 461, 836, 946, 997, 1300, 1321
SsiI CCGC 5 cut(s) 10, 15, 119, 662, 1253
SspI AATATT 3 cut(s) 295, 396, 1069
SspMI CTAG 5 cut(s) 72, 942, 1055, 1286, 1354
TaaI ACNGT 7 cut(s) 25, 188, 240, 257, 794, 800, 1243
TaiI ACGT 3 cut(s) 130, 481, 1128
TaqI TCGA 2 cut(s) 213, 966
TasI AATT 7 cut(s) 109, 461, 836, 946, 997, 1300, 1321
TatI WGTACW 2 cut(s) 523, 1225
TauI GCSGC 2 cut(s) 122, 664
TfiI GAWTC 6 cut(s) 145, 171, 232, 360, 604, 1350
Tru1I TTAA 7 cut(s) 207, 291, 530, 558, 711, 996, 1071
Tru9I TTAA 7 cut(s) 207, 291, 530, 558, 711, 996, 1071
TscAI CASTG 1 cut(s) 503
TseFI GTSAC 2 cut(s) 533, 794
TseI GCWGC 1 cut(s) 1265
Tsp45I GTSAC 2 cut(s) 533, 794
TspDTI ATGAA 6 cut(s) 187, 669, 899, 1094, 1122, 1287
TspGWI ACGGA 2 cut(s) 119, 435
TspRI CASTG 1 cut(s) 503
Vha464I CTTAAG 2 cut(s) 206, 529
VneI GTGCAC 1 cut(s) 499
VspI ATTAAT 1 cut(s) 996
XagI CCTNNNNNAGG 1 cut(s) 974
XapI RAATTY 4 cut(s) 109, 461, 946, 1300
XbaI TCTAGA 2 cut(s) 941, 1054
XceI RCATGY 1 cut(s) 1154
XmiI GTMKAC 1 cut(s) 966
XspI CTAG 5 cut(s) 72, 942, 1055, 1286, 1354
ZrmI AGTACT 1 cut(s) 1227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.