Rmu_sc0003139.1_g000017

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003139.1
OG0000103
Physical Location & Seq
Forward (+)
59577 .. 64614
5038 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003139.1_g000017.1.cds

Sequence Viewer

Length: 1863 bp
atgaagaaaagtacaagacccaagtcctgttcgaatgtgaagatggagttggataggattagcaacttaccaggtgatgttatagataaaatactatcacatttgccactcagggacgtagcgaggacatgtgttttgtcaagcaagtggaggtacaaattggttatgcttccgcatcttgtgtttgatcgtgagtgcagctcgagcattgttgatcatgttctcttaactcacattggccccctcaccagatttaagcttagtcaaggatgtaaacacctcagagatattgatcggtggattcttcacctgtcgagatactccctcaaacagttcgtggttgatctttgggaagggcagcctatgccacgctacaagatgacttcatgcatgttttcatgtcaagatatcattcatttaaagttgcgtaattttttgctaaaacccccgtctacattcaaagggttcaggagtttgaagagtcttgagattgagcatgttactttgtcgcaagatgtgttggaaaaaatgagtctttgttgtcctctgcttgagagattcactttgaccaactgtaacggtttcagccagctcaagattgatgcaccaaatctcgaattccttgacgttttcggttcgtttgaggattttagtgttgtgaatacgttaaatcttgctgttgtttctattggttttgtcaactcaccagtcccttgcagttccagcaaattgatcaagttttttgatgacctgtcttgtattcagaggctccaaactaagtggggctttttgaagtacttggctgctggtgccttgctagaaaagctgcccaaaccatgtctgcacctgaaatttcttgaaatggacgtatgcttagatgatcgggaggatattttaactgctctttgccttctgagaagctcccctgctctagaagaactagaaattctcacaaatgagttctcaactaatgaagctaatgtaggtacagtgaactcttacttggatgacgaccatagttattcattcacccaactgcgacatgtgaaaatatacaacatctctggtcttgaaggtgaactagattttatccaatttcttcttttatgttcgcctgtgcttgagacgatgactgttgattgtgtggctgaggggcatgatacagatgaatctttggagctagtaaagaagttgcttcgtttgaggcgggcatcagagaatcgcaaggaggctggactggcttctggccttcctgccgtctgttccgctgccaagcgggtgatgaatgttaaggcttggggcagcatcctagagattgttgctactcaaagctttggcagatggtttggttttggtggtcaatatttacgatatgcgcttcacgcgcccctaaacaaagaggttttgcttcccatttcgatcgtgctcgtccggcagcgcaaggaggctggactggcttctggccttcctgccgtctgttccgctgccaagcgggtgatgaatgttaaggcttggggcagcatcctagagattgttgctactcaaagctttggcagatggtttggtggtgttctgtttcctctttcttttcacacacggacacacggtggccggtgttcaatttcggtgatgtgggcgatggattgggatgggaggcggttggatcccaatctactttccttccaagtggtgttgccgacttttattgggaggtgcgacgagattcgggccgtgctggtttcggcagtggcggcgctgggttgtgcacatgtggctgctgtacgaaggatttgggcggggcttgttaggccggtctgctgggttttgggtccactgtttctttgggctgcttctgagacttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

620

Amino Acids

69.67

Weight (kDa)

8.68

Isoelectric Point (pI)

43.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 809
AccI GTMKAC 1 cut(s) 452
AccII CGCG 1 cut(s) 1385
AciI CCGC 9 cut(s) 173, 1207, 1266, 1276, 1482, 1492, 1657, 1751, 1796
AclWI GGATC 2 cut(s) 1658, 1671
AcoI YGGCCR 1 cut(s) 1609
AcsI RAATTY 3 cut(s) 617, 851, 945
AdeI CACNNNGTG 1 cut(s) 1607
AfaI GTAC 5 cut(s) 13, 155, 797, 988, 1782
AflIII ACRYGT 3 cut(s) 128, 1042, 1768
AgsI TTSAA 6 cut(s) 460, 478, 793, 860, 1073, 1620
AjnI CCWGG 1 cut(s) 70
AjuI GAANNNNNNNTTGG 4 cut(s) 32, 64, 986, 1018
AluBI AGCT 9 cut(s) 201, 259, 592, 826, 921, 977, 1180, 1332, 1548
AluI AGCT 9 cut(s) 201, 259, 592, 826, 921, 977, 1180, 1332, 1548
Alw21I GWGCWC 2 cut(s) 1428, 1768
Alw26I GTCTC 2 cut(s) 1118, 1850
Alw44I GTGCAC 1 cut(s) 1764
AlwI GGATC 2 cut(s) 1658, 1671
Ama87I CYCGRG 1 cut(s) 202
AoxI GGCC 6 cut(s) 238, 1246, 1462, 1609, 1728, 1808
ApaLI GTGCAC 1 cut(s) 1764
ApoI RAATTY 3 cut(s) 617, 851, 945
ArsI GACNNNNNNTTYG 2 cut(s) 118, 150
AspLEI GCGC 4 cut(s) 1378, 1387, 1440, 1756
AspS9I GGNCC 3 cut(s) 239, 1728, 1829
AsuHPI GGTGA 9 cut(s) 86, 238, 299, 696, 1021, 1088, 1291, 1507, 1639
AsuII TTCGAA 1 cut(s) 32
AvaI CYCGRG 1 cut(s) 202
AvaII GGWCC 1 cut(s) 1829
BaeGI GKGCMC 1 cut(s) 1768
BamHI GGATCC 1 cut(s) 1663
BanI GGYRCC 1 cut(s) 809
Bbv12I GWGCWC 2 cut(s) 1428, 1768
BbvCI CCTCAGC 1 cut(s) 1149
BccI CCATC 5 cut(s) 37, 1335, 1551, 1633, 1643
BceAI ACGGC 3 cut(s) 1241, 1457, 1715
BciT130I CCWGG 1 cut(s) 72
BclI TGATCA 2 cut(s) 214, 732
BcoDI GTCTC 2 cut(s) 1118, 1850
BfaI CTAG 7 cut(s) 818, 932, 941, 1082, 1181, 1310, 1526
BfoI RGCGCY 1 cut(s) 1757
BmcAI AGTACT 1 cut(s) 797
Bme1390I CCNGG 1 cut(s) 72
Bme18I GGWCC 1 cut(s) 1829
BmeT110I CYCGRG 1 cut(s) 202
BmgT120I GGNCC 3 cut(s) 239, 1728, 1829
BmiI GGNNCC 5 cut(s) 241, 770, 811, 1665, 1830
BmrFI CCNGG 1 cut(s) 72
BmsI GCATC 5 cut(s) 184, 592, 1220, 1314, 1530
BoxI GACNNNNGTC 1 cut(s) 22
BplI GAGNNNNNCTC 2 cut(s) 185, 217
Bpu10I CCTNAGC 1 cut(s) 1149
Bpu14I TTCGAA 1 cut(s) 32
BpuEI CTTGAG 4 cut(s) 506, 572, 578, 1142
BsaBI GATNNNNATC 2 cut(s) 291, 1668
Bse118I RCCGGY 2 cut(s) 1611, 1810
Bse1I ACTGG 3 cut(s) 707, 1242, 1458
Bse8I GATNNNNATC 2 cut(s) 291, 1668
BseBI CCWGG 1 cut(s) 72
BseGI GGATG 5 cut(s) 275, 1012, 1305, 1521, 1654
BseJI GATNNNNATC 2 cut(s) 291, 1668
BseMII CTCAG 5 cut(s) 124, 295, 905, 1140, 1845
BseNI ACTGG 3 cut(s) 707, 1242, 1458
BseSI GKGCMC 1 cut(s) 1768
BseYI CCCAGC 2 cut(s) 1756, 1818
BsgI GTGCAG 2 cut(s) 217, 827
Bsh1236I CGCG 1 cut(s) 1385
Bsh1285I CGRYCG 1 cut(s) 1422
BshFI GGCC 6 cut(s) 240, 1248, 1464, 1611, 1730, 1810
BshNI GGYRCC 1 cut(s) 809
BsiEI CGRYCG 1 cut(s) 1422
BsiHKAI GWGCWC 2 cut(s) 1428, 1768
BsiHKCI CYCGRG 1 cut(s) 202
BsiSI CCGG 3 cut(s) 1432, 1612, 1811
BslFI GGGAC 2 cut(s) 128, 695
BsmAI GTCTC 2 cut(s) 1118, 1850
BsmBI CGTCTC 1 cut(s) 1118
BsmFI GGGAC 2 cut(s) 128, 695
BsnI GGCC 6 cut(s) 240, 1248, 1464, 1611, 1730, 1810
BsoBI CYCGRG 1 cut(s) 202
Bsp119I TTCGAA 1 cut(s) 32
Bsp1286I GDGCHC 2 cut(s) 1428, 1768
Bsp143I GATC 8 cut(s) 187, 214, 292, 343, 732, 880, 1419, 1663
BspACI CCGC 9 cut(s) 173, 1207, 1266, 1276, 1482, 1492, 1657, 1751, 1796
BspANI GGCC 6 cut(s) 240, 1248, 1464, 1611, 1730, 1810
BspCNI CTCAG 5 cut(s) 123, 294, 906, 1141, 1846
BspFNI CGCG 1 cut(s) 1385
BspLI GGNNCC 5 cut(s) 241, 770, 811, 1665, 1830
BspPI GGATC 2 cut(s) 1658, 1671
BspT104I TTCGAA 1 cut(s) 32
BspT107I GGYRCC 1 cut(s) 809
BsrFI RCCGGY 2 cut(s) 1611, 1810
BsrI ACTGG 3 cut(s) 707, 1242, 1458
BssAI RCCGGY 2 cut(s) 1611, 1810
BssMI GATC 8 cut(s) 187, 214, 292, 343, 732, 880, 1419, 1663
Bst2UI CCWGG 1 cut(s) 72
Bst4CI ACNGT 7 cut(s) 333, 575, 581, 991, 1135, 1607, 1836
Bst6I CTCTTC 1 cut(s) 473
BstAPI GCANNNNNTGC 1 cut(s) 364
BstBI TTCGAA 1 cut(s) 32
BstC8I GCNNGC 2 cut(s) 590, 1209
BstDEI CTNAG 9 cut(s) 110, 260, 281, 777, 874, 914, 1149, 1854, 1860
BstF5I GGATG 5 cut(s) 275, 1012, 1305, 1521, 1654
BstFNI CGCG 1 cut(s) 1385
BstH2I RGCGCY 1 cut(s) 1757
BstHHI GCGC 4 cut(s) 1378, 1387, 1440, 1756
BstKTI GATC 8 cut(s) 190, 217, 295, 346, 735, 883, 1422, 1666
BstMAI GTCTC 2 cut(s) 1118, 1850
BstMBI GATC 8 cut(s) 187, 214, 292, 343, 732, 880, 1419, 1663
BstMCI CGRYCG 1 cut(s) 1422
BstNI CCWGG 1 cut(s) 72
BstNSI RCATGY 5 cut(s) 132, 394, 500, 1046, 1772
BstPAI GACNNNNGTC 1 cut(s) 22
BstSCI CCNGG 1 cut(s) 70
BstSLI GKGCMC 1 cut(s) 1768
BstUI CGCG 1 cut(s) 1385
BstX2I RGATCY 1 cut(s) 1663
BstYI RGATCY 1 cut(s) 1663
BsuRI GGCC 6 cut(s) 240, 1248, 1464, 1611, 1730, 1810
BtgZI GCGATG 1 cut(s) 1652
BtsCI GGATG 5 cut(s) 275, 1012, 1305, 1521, 1654
BtsI GCAGTG 1 cut(s) 1752
BtsIMutI CAGTG 3 cut(s) 996, 1752, 1832
Cac8I GCNNGC 2 cut(s) 590, 1209
CfoI GCGC 4 cut(s) 1378, 1387, 1440, 1756
Cfr10I RCCGGY 2 cut(s) 1611, 1810
Cfr13I GGNCC 3 cut(s) 239, 1728, 1829
CsiI ACCWGGT 1 cut(s) 70
Csp6I GTAC 5 cut(s) 12, 154, 796, 987, 1781
CspCI CAANNNNNGTGG 2 cut(s) 761, 796
CviQI GTAC 5 cut(s) 12, 154, 796, 987, 1781
DdeI CTNAG 9 cut(s) 110, 260, 281, 777, 874, 914, 1149, 1854, 1860
DpnI GATC 8 cut(s) 189, 216, 294, 345, 734, 882, 1421, 1665
DpnII GATC 8 cut(s) 187, 214, 292, 343, 732, 880, 1419, 1663
DraI TTTAAA 1 cut(s) 420
DraIII CACNNNGTG 1 cut(s) 1607
EaeI YGGCCR 1 cut(s) 1609
Eam1104I CTCTTC 1 cut(s) 473
EarI CTCTTC 1 cut(s) 473
Eco32I GATATC 1 cut(s) 409
Eco47I GGWCC 1 cut(s) 1829
Eco88I CYCGRG 1 cut(s) 202
EcoRI GAATTC 1 cut(s) 617
EcoRII CCWGG 1 cut(s) 70
EcoRV GATATC 1 cut(s) 409
EcoT22I ATGCAT 1 cut(s) 392
Esp3I CGTCTC 1 cut(s) 1118
FalI AAGNNNNNCTT 2 cut(s) 770, 802
FaqI GGGAC 2 cut(s) 128, 695
FauI CCCGC 4 cut(s) 1200, 1269, 1485, 1789
FbaI TGATCA 2 cut(s) 214, 732
FblI GTMKAC 1 cut(s) 452
FokI GGATG 5 cut(s) 282, 1019, 1292, 1508, 1661
FspBI CTAG 7 cut(s) 818, 932, 941, 1082, 1181, 1310, 1526
GlaI GCGC 4 cut(s) 1377, 1386, 1439, 1755
GsaI CCCAGC 2 cut(s) 1760, 1822
HaeII RGCGCY 1 cut(s) 1757
HaeIII GGCC 6 cut(s) 240, 1248, 1464, 1611, 1730, 1810
HapII CCGG 3 cut(s) 1432, 1612, 1811
HhaI GCGC 4 cut(s) 1378, 1387, 1440, 1756
Hin6I GCGC 4 cut(s) 1376, 1385, 1438, 1754
HinP1I GCGC 4 cut(s) 1376, 1385, 1438, 1754
HincII GTYRAC 1 cut(s) 700
HindII GTYRAC 1 cut(s) 700
HindIII AAGCTT 3 cut(s) 257, 1330, 1546
HinfI GANTC 7 cut(s) 301, 481, 532, 558, 1169, 1219, 1723
HpaII CCGG 3 cut(s) 1432, 1612, 1811
HphI GGTGA 9 cut(s) 86, 238, 299, 696, 1021, 1088, 1291, 1507, 1639
Hpy166II GTNNAC 7 cut(s) 275, 453, 700, 994, 1079, 1766, 1832
Hpy188I TCNGA 5 cut(s) 284, 765, 915, 1216, 1855
Hpy8I GTNNAC 7 cut(s) 275, 453, 700, 994, 1079, 1766, 1832
Hpy99I CGWCG 1 cut(s) 1721
HpyAV CCTTC 7 cut(s) 347, 920, 1067, 1259, 1475, 1690, 1779
HpyCH4III ACNGT 7 cut(s) 333, 575, 581, 991, 1135, 1607, 1836
HpyCH4IV ACGT 4 cut(s) 117, 627, 665, 867
HpyCH4V TGCA 6 cut(s) 198, 390, 605, 717, 844, 1766
HpyF3I CTNAG 9 cut(s) 110, 260, 281, 777, 874, 914, 1149, 1854, 1860
HpySE526I ACGT 4 cut(s) 117, 627, 665, 867
HspAI GCGC 4 cut(s) 1376, 1385, 1438, 1754
Ksp22I TGATCA 2 cut(s) 214, 732
Kzo9I GATC 8 cut(s) 187, 214, 292, 343, 732, 880, 1419, 1663
LmnI GCTCC 3 cut(s) 774, 926, 1177
LweI GCATC 5 cut(s) 184, 592, 1220, 1314, 1530
MabI ACCWGGT 1 cut(s) 70
MaeI CTAG 7 cut(s) 818, 932, 941, 1082, 1181, 1310, 1526
MaeII ACGT 4 cut(s) 117, 627, 665, 867
MaeIII GTNAC 2 cut(s) 499, 575
MalI GATC 8 cut(s) 189, 216, 294, 345, 734, 882, 1421, 1665
MboI GATC 8 cut(s) 187, 214, 292, 343, 732, 880, 1419, 1663
MboII GAAGA 6 cut(s) 16, 52, 296, 490, 947, 1091
MflI RGATCY 1 cut(s) 1663
MhlI GDGCHC 2 cut(s) 1428, 1768
MluCI AATT 8 cut(s) 158, 430, 617, 728, 851, 945, 1094, 1620
MlyI GAGTC 2 cut(s) 490, 541
MmeI TCCRAC 3 cut(s) 30, 501, 1641
Mph1103I ATGCAT 1 cut(s) 392
MseI TTAA 7 cut(s) 227, 255, 419, 668, 896, 1290, 1506
MspA1I CMGCKG 2 cut(s) 1268, 1484
MspI CCGG 3 cut(s) 1432, 1612, 1811
MspR9I CCNGG 1 cut(s) 72
MvaI CCWGG 1 cut(s) 72
MvnI CGCG 1 cut(s) 1385
NdeII GATC 8 cut(s) 187, 214, 292, 343, 732, 880, 1419, 1663
NlaIV GGNNCC 5 cut(s) 241, 770, 811, 1665, 1830
NsiI ATGCAT 1 cut(s) 392
NspI RCATGY 5 cut(s) 132, 394, 500, 1046, 1772
NspV TTCGAA 1 cut(s) 32
PaeR7I CTCGAG 1 cut(s) 202
PciI ACATGT 3 cut(s) 128, 1042, 1768
PfeI GAWTC 5 cut(s) 301, 558, 1169, 1219, 1723
Ple19I CGATCG 1 cut(s) 1422
PleI GAGTC 2 cut(s) 489, 540
PpsI GAGTC 2 cut(s) 489, 540
PscI ACATGT 3 cut(s) 128, 1042, 1768
PshAI GACNNNNGTC 1 cut(s) 22
Psp6I CCWGG 1 cut(s) 70
PspFI CCCAGC 2 cut(s) 1756, 1818
PspGI CCWGG 1 cut(s) 70
PspN4I GGNNCC 5 cut(s) 241, 770, 811, 1665, 1830
PspPI GGNCC 3 cut(s) 239, 1728, 1829
PspXI VCTCGAGB 1 cut(s) 202
PsuI RGATCY 1 cut(s) 1663
PvuI CGATCG 1 cut(s) 1422
RsaI GTAC 5 cut(s) 13, 155, 797, 988, 1782
RsaNI GTAC 5 cut(s) 12, 154, 796, 987, 1781
SaqAI TTAA 7 cut(s) 227, 255, 419, 668, 896, 1290, 1506
Sau3AI GATC 8 cut(s) 187, 214, 292, 343, 732, 880, 1419, 1663
Sau96I GGNCC 3 cut(s) 239, 1728, 1829
ScaI AGTACT 1 cut(s) 797
SchI GAGTC 2 cut(s) 490, 541
ScrFI CCNGG 1 cut(s) 72
SduI GDGCHC 2 cut(s) 1428, 1768
SexAI ACCWGGT 1 cut(s) 70
SfaNI GCATC 5 cut(s) 184, 592, 1220, 1314, 1530
Sfr274I CTCGAG 1 cut(s) 202
SfuI TTCGAA 1 cut(s) 32
SinI GGWCC 1 cut(s) 1829
SlaI CTCGAG 1 cut(s) 202
SmlI CTYRAG 5 cut(s) 202, 485, 551, 593, 1121
SmoI CTYRAG 5 cut(s) 202, 485, 551, 593, 1121
Sse9I AATT 8 cut(s) 158, 430, 617, 728, 851, 945, 1094, 1620
SsiI CCGC 9 cut(s) 173, 1207, 1266, 1276, 1482, 1492, 1657, 1751, 1796
SspI AATATT 1 cut(s) 1364
SspMI CTAG 7 cut(s) 818, 932, 941, 1082, 1181, 1310, 1526
StyD4I CCNGG 1 cut(s) 70
TaaI ACNGT 7 cut(s) 333, 575, 581, 991, 1135, 1607, 1836
TaiI ACGT 4 cut(s) 120, 630, 668, 870
TaqI TCGA 5 cut(s) 32, 203, 314, 615, 1418
TasI AATT 8 cut(s) 158, 430, 617, 728, 851, 945, 1094, 1620
TatI WGTACW 2 cut(s) 11, 795
TauI GCSGC 1 cut(s) 1754
TfiI GAWTC 5 cut(s) 301, 558, 1169, 1219, 1723
Tru1I TTAA 7 cut(s) 227, 255, 419, 668, 896, 1290, 1506
Tru9I TTAA 7 cut(s) 227, 255, 419, 668, 896, 1290, 1506
TscAI CASTG 3 cut(s) 996, 1752, 1839
TspDTI ATGAA 9 cut(s) 17, 375, 387, 404, 987, 1014, 1182, 1298, 1514
TspGWI ACGGA 1 cut(s) 1612
TspRI CASTG 3 cut(s) 996, 1752, 1839
VneI GTGCAC 1 cut(s) 1764
VpaK11BI GGWCC 1 cut(s) 1829
XapI RAATTY 3 cut(s) 617, 851, 945
XbaI TCTAGA 1 cut(s) 931
XceI RCATGY 5 cut(s) 132, 394, 500, 1046, 1772
XcmI CCANNNNNNNNNTGG 1 cut(s) 1839
XhoI CTCGAG 1 cut(s) 202
XmiI GTMKAC 1 cut(s) 452
XspI CTAG 7 cut(s) 818, 932, 941, 1082, 1181, 1310, 1526
ZrmI AGTACT 1 cut(s) 797
Zsp2I ATGCAT 1 cut(s) 392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.