F-box FBD LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Thioredoxin_8 | PF13905 | 91 - 150 | 1e-05 | Thioredoxin-like |
| F-box | PF00646 | 284 - 321 | 6.6e-07 | F-box domain |
| LRR_At1g61320_AtMIF1 | PF23622 | 369 - 472 | 4.4e-11 | At1g61320/AtMIF1, LRR domain |
| LRR_At5g56370 | PF24758 | 372 - 593 | 6.9e-16 | FBD-associated F-box protein At5g56370, LRR repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 786, 1008, 1385 |
| Acc36I | ACCTGC | 1 cut(s) | 1528 |
| AccB1I | GGYRCC | 1 cut(s) | 1103 |
| AccI | GTMKAC | 1 cut(s) | 299 |
| AciI | CCGC | 3 cut(s) | 281, 1107, 1267 |
| AclWI | GGATC | 5 cut(s) | 98, 1120, 1133, 1683, 2002 |
| AcuI | CTGAAG | 4 cut(s) | 603, 1457, 1700, 1736 |
| AcvI | CACGTG | 1 cut(s) | 218 |
| AfaI | GTAC | 4 cut(s) | 147, 737, 947, 1002 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 592, 598, 1762 |
| AjnI | CCWGG | 4 cut(s) | 201, 591, 994, 1543 |
| AleI | CACNNNNGTG | 1 cut(s) | 216 |
| Alw21I | GWGCWC | 1 cut(s) | 1588 |
| Alw26I | GTCTC | 5 cut(s) | 211, 262, 290, 649, 1743 |
| AlwI | GGATC | 5 cut(s) | 98, 1120, 1133, 1683, 2002 |
| AoxI | GGCC | 1 cut(s) | 2018 |
| ApeKI | GCWGC | 3 cut(s) | 52, 557, 713 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1426, 1458 |
| AspLEI | GCGC | 2 cut(s) | 637, 1754 |
| AspS9I | GGNCC | 2 cut(s) | 1061, 2053 |
| AsuHPI | GGTGA | 6 cut(s) | 550, 1393, 1535, 1652, 1828, 1929 |
| AvaII | GGWCC | 2 cut(s) | 1061, 2053 |
| BamHI | GGATCC | 1 cut(s) | 1125 |
| BanI | GGYRCC | 1 cut(s) | 1103 |
| BbrPI | CACGTG | 1 cut(s) | 218 |
| BbsI | GAAGAC | 1 cut(s) | 1463 |
| Bbv12I | GWGCWC | 1 cut(s) | 1588 |
| BbvCI | CCTCAGC | 1 cut(s) | 2026 |
| BbvI | GCAGC | 3 cut(s) | 39, 569, 725 |
| BccI | CCATC | 6 cut(s) | 131, 271, 446, 494, 945, 1116 |
| BciT130I | CCWGG | 4 cut(s) | 203, 593, 996, 1545 |
| BclI | TGATCA | 1 cut(s) | 1036 |
| BcoDI | GTCTC | 5 cut(s) | 211, 262, 290, 649, 1743 |
| BfaI | CTAG | 3 cut(s) | 56, 1772, 1907 |
| BfmI | CTRYAG | 1 cut(s) | 1978 |
| BfoI | RGCGCY | 1 cut(s) | 1755 |
| BfuAI | ACCTGC | 1 cut(s) | 1528 |
| BglII | AGATCT | 1 cut(s) | 967 |
| BisI | GCNGC | 3 cut(s) | 53, 558, 714 |
| BlsI | GCNGC | 3 cut(s) | 54, 559, 715 |
| BmcAI | AGTACT | 1 cut(s) | 1002 |
| Bme1390I | CCNGG | 4 cut(s) | 203, 593, 996, 1545 |
| Bme18I | GGWCC | 2 cut(s) | 1061, 2053 |
| BmgT120I | GGNCC | 2 cut(s) | 1061, 2053 |
| BmiI | GGNNCC | 4 cut(s) | 1105, 1127, 1542, 2055 |
| BmrFI | CCNGG | 4 cut(s) | 203, 593, 996, 1545 |
| BmsI | GCATC | 9 cut(s) | 128, 184, 394, 1102, 1185, 1408, 1504, 1932, 1979 |
| BpiI | GAAGAC | 1 cut(s) | 1463 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1805, 1837 |
| BpmI | CTGGAG | 1 cut(s) | 1388 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2026 |
| BpuEI | CTTGAG | 3 cut(s) | 1394, 1550, 1967 |
| BsaAI | YACGTR | 1 cut(s) | 218 |
| BsaI | GGTCTC | 2 cut(s) | 211, 290 |
| BsaJI | CCNNGG | 3 cut(s) | 201, 443, 572 |
| BsaWI | WCCGGW | 2 cut(s) | 106, 706 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1413, 1443 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 592, 598, 1762 |
| Bse1I | ACTGG | 1 cut(s) | 2011 |
| BseBI | CCWGG | 4 cut(s) | 203, 593, 996, 1545 |
| BseDI | CCNNGG | 3 cut(s) | 201, 443, 572 |
| BseGI | GGATG | 1 cut(s) | 1519 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 592, 598, 1762 |
| BseMII | CTCAG | 4 cut(s) | 1480, 1592, 1736, 2040 |
| BseNI | ACTGG | 1 cut(s) | 2011 |
| BseRI | GAGGAG | 2 cut(s) | 561, 578 |
| BseXI | GCAGC | 3 cut(s) | 39, 569, 725 |
| BshFI | GGCC | 1 cut(s) | 2020 |
| BshNI | GGYRCC | 1 cut(s) | 1103 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1588 |
| BsiSI | CCGG | 2 cut(s) | 107, 707 |
| BslFI | GGGAC | 1 cut(s) | 1809 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 592, 598, 1762 |
| BsmAI | GTCTC | 5 cut(s) | 211, 262, 290, 649, 1743 |
| BsmFI | GGGAC | 1 cut(s) | 1809 |
| BsmI | GAATGC | 1 cut(s) | 416 |
| BsnI | GGCC | 1 cut(s) | 2020 |
| Bso31I | GGTCTC | 2 cut(s) | 211, 290 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1588 |
| Bsp143I | GATC | 9 cut(s) | 103, 603, 967, 1036, 1125, 1462, 1675, 1711, 2007 |
| BspACI | CCGC | 3 cut(s) | 281, 1107, 1267 |
| BspANI | GGCC | 1 cut(s) | 2020 |
| BspCNI | CTCAG | 4 cut(s) | 1479, 1591, 1737, 2039 |
| BspHI | TCATGA | 3 cut(s) | 1012, 1087, 1609 |
| BspLI | GGNNCC | 4 cut(s) | 1105, 1127, 1542, 2055 |
| BspMI | ACCTGC | 1 cut(s) | 1528 |
| BspPI | GGATC | 5 cut(s) | 98, 1120, 1133, 1683, 2002 |
| BspT107I | GGYRCC | 1 cut(s) | 1103 |
| BspTNI | GGTCTC | 2 cut(s) | 211, 290 |
| BsrI | ACTGG | 1 cut(s) | 2011 |
| BssECI | CCNNGG | 3 cut(s) | 201, 443, 572 |
| BssMI | GATC | 9 cut(s) | 103, 603, 967, 1036, 1125, 1462, 1675, 1711, 2007 |
| BssT1I | CCWWGG | 1 cut(s) | 443 |
| Bst2UI | CCWGG | 4 cut(s) | 203, 593, 996, 1545 |
| Bst4CI | ACNGT | 3 cut(s) | 308, 1381, 1783 |
| Bst6I | CTCTTC | 4 cut(s) | 158, 1052, 1280, 1746 |
| BstBAI | YACGTR | 1 cut(s) | 218 |
| BstC8I | GCNNGC | 1 cut(s) | 1968 |
| BstDEI | CTNAG | 5 cut(s) | 851, 1466, 1578, 1745, 2026 |
| BstEII | GGTNACC | 1 cut(s) | 1523 |
| BstF5I | GGATG | 1 cut(s) | 1519 |
| BstH2I | RGCGCY | 1 cut(s) | 1755 |
| BstHHI | GCGC | 2 cut(s) | 637, 1754 |
| BstKTI | GATC | 9 cut(s) | 106, 606, 970, 1039, 1128, 1465, 1678, 1714, 2010 |
| BstMAI | GTCTC | 5 cut(s) | 211, 262, 290, 649, 1743 |
| BstMBI | GATC | 9 cut(s) | 103, 603, 967, 1036, 1125, 1462, 1675, 1711, 2007 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 413, 1554, 1583 |
| BstNI | CCWGG | 4 cut(s) | 203, 593, 996, 1545 |
| BstNSI | RCATGY | 2 cut(s) | 257, 442 |
| BstPI | GGTNACC | 1 cut(s) | 1523 |
| BstSCI | CCNGG | 4 cut(s) | 201, 591, 994, 1543 |
| BstSFI | CTRYAG | 1 cut(s) | 1978 |
| BstV1I | GCAGC | 3 cut(s) | 39, 569, 725 |
| BstV2I | GAAGAC | 1 cut(s) | 1463 |
| BstX2I | RGATCY | 4 cut(s) | 103, 967, 1125, 1675 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1439 |
| BstYI | RGATCY | 4 cut(s) | 103, 967, 1125, 1675 |
| BsuRI | GGCC | 1 cut(s) | 2020 |
| BtsCI | GGATG | 1 cut(s) | 1519 |
| BtsI | GCAGTG | 1 cut(s) | 918 |
| BtsIMutI | CAGTG | 2 cut(s) | 918, 1586 |
| BveI | ACCTGC | 1 cut(s) | 1528 |
| Cac8I | GCNNGC | 1 cut(s) | 1968 |
| CciI | TCATGA | 3 cut(s) | 1012, 1087, 1609 |
| CfoI | GCGC | 2 cut(s) | 637, 1754 |
| Cfr13I | GGNCC | 2 cut(s) | 1061, 2053 |
| Csp6I | GTAC | 4 cut(s) | 146, 736, 946, 1001 |
| CviQI | GTAC | 4 cut(s) | 146, 736, 946, 1001 |
| DdeI | CTNAG | 5 cut(s) | 851, 1466, 1578, 1745, 2026 |
| DpnI | GATC | 9 cut(s) | 105, 605, 969, 1038, 1127, 1464, 1677, 1713, 2009 |
| DpnII | GATC | 9 cut(s) | 103, 603, 967, 1036, 1125, 1462, 1675, 1711, 2007 |
| DraI | TTTAAA | 3 cut(s) | 1177, 1623, 1932 |
| Eam1104I | CTCTTC | 4 cut(s) | 158, 1052, 1280, 1746 |
| EarI | CTCTTC | 4 cut(s) | 158, 1052, 1280, 1746 |
| Eco130I | CCWWGG | 1 cut(s) | 443 |
| Eco147I | AGGCCT | 1 cut(s) | 2020 |
| Eco31I | GGTCTC | 2 cut(s) | 211, 290 |
| Eco32I | GATATC | 1 cut(s) | 1777 |
| Eco47I | GGWCC | 2 cut(s) | 1061, 2053 |
| Eco57I | CTGAAG | 4 cut(s) | 603, 1457, 1700, 1736 |
| Eco72I | CACGTG | 1 cut(s) | 218 |
| Eco91I | GGTNACC | 1 cut(s) | 1523 |
| EcoO65I | GGTNACC | 1 cut(s) | 1523 |
| EcoRI | GAATTC | 3 cut(s) | 44, 320, 1866 |
| EcoRII | CCWGG | 4 cut(s) | 201, 591, 994, 1543 |
| EcoRV | GATATC | 1 cut(s) | 1777 |
| EcoT14I | CCWWGG | 1 cut(s) | 443 |
| EcoT22I | ATGCAT | 3 cut(s) | 160, 317, 1700 |
| ErhI | CCWWGG | 1 cut(s) | 443 |
| FaqI | GGGAC | 1 cut(s) | 1809 |
| FauI | CCCGC | 2 cut(s) | 274, 1274 |
| FauNDI | CATATG | 2 cut(s) | 795, 1694 |
| FbaI | TGATCA | 1 cut(s) | 1036 |
| FblI | GTMKAC | 1 cut(s) | 299 |
| Fnu4HI | GCNGC | 3 cut(s) | 53, 558, 714 |
| FokI | GGATG | 1 cut(s) | 1526 |
| Fsp4HI | GCNGC | 3 cut(s) | 53, 558, 714 |
| FspBI | CTAG | 3 cut(s) | 56, 1772, 1907 |
| GlaI | GCGC | 2 cut(s) | 636, 1753 |
| GluI | GCNGC | 3 cut(s) | 53, 558, 714 |
| GsuI | CTGGAG | 1 cut(s) | 1388 |
| HaeII | RGCGCY | 1 cut(s) | 1755 |
| HaeIII | GGCC | 1 cut(s) | 2020 |
| HapII | CCGG | 2 cut(s) | 107, 707 |
| HhaI | GCGC | 2 cut(s) | 637, 1754 |
| Hin6I | GCGC | 2 cut(s) | 635, 1752 |
| HinP1I | GCGC | 2 cut(s) | 635, 1752 |
| HincII | GTYRAC | 1 cut(s) | 1377 |
| HindII | GTYRAC | 1 cut(s) | 1377 |
| HindIII | AAGCTT | 2 cut(s) | 1079, 1655 |
| HinfI | GANTC | 2 cut(s) | 166, 1228 |
| HpaII | CCGG | 2 cut(s) | 107, 707 |
| HphI | GGTGA | 6 cut(s) | 550, 1393, 1535, 1652, 1828, 1929 |
| Hpy166II | GTNNAC | 4 cut(s) | 300, 749, 1377, 1819 |
| Hpy188I | TCNGA | 6 cut(s) | 672, 1476, 1680, 1716, 1746, 1856 |
| Hpy8I | GTNNAC | 4 cut(s) | 300, 749, 1377, 1819 |
| HpyCH4III | ACNGT | 3 cut(s) | 308, 1381, 1783 |
| HpyCH4IV | ACGT | 3 cut(s) | 144, 217, 762 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 413, 1554, 1583 |
| HpyF3I | CTNAG | 5 cut(s) | 851, 1466, 1578, 1745, 2026 |
| HpySE526I | ACGT | 3 cut(s) | 144, 217, 762 |
| HspAI | GCGC | 2 cut(s) | 635, 1752 |
| Ksp22I | TGATCA | 1 cut(s) | 1036 |
| Kzo9I | GATC | 9 cut(s) | 103, 603, 967, 1036, 1125, 1462, 1675, 1711, 2007 |
| Lsp1109I | GCAGC | 3 cut(s) | 39, 569, 725 |
| LweI | GCATC | 9 cut(s) | 128, 184, 394, 1102, 1185, 1408, 1504, 1932, 1979 |
| MaeI | CTAG | 3 cut(s) | 56, 1772, 1907 |
| MaeII | ACGT | 3 cut(s) | 144, 217, 762 |
| MaeIII | GTNAC | 8 cut(s) | 218, 789, 854, 871, 1315, 1523, 1640, 1880 |
| MalI | GATC | 9 cut(s) | 105, 605, 969, 1038, 1127, 1464, 1677, 1713, 2009 |
| MboI | GATC | 9 cut(s) | 103, 603, 967, 1036, 1125, 1462, 1675, 1711, 2007 |
| MflI | RGATCY | 4 cut(s) | 103, 967, 1125, 1675 |
| MhlI | GDGCHC | 1 cut(s) | 1588 |
| MlyI | GAGTC | 1 cut(s) | 175 |
| MmeI | TCCRAC | 3 cut(s) | 695, 1789, 1834 |
| Mph1103I | ATGCAT | 3 cut(s) | 160, 317, 1700 |
| MseI | TTAA | 9 cut(s) | 399, 1098, 1176, 1302, 1484, 1622, 1727, 1931, 1962 |
| MslI | CAYNNNNRTG | 2 cut(s) | 132, 216 |
| MspI | CCGG | 2 cut(s) | 107, 707 |
| MspR9I | CCNGG | 4 cut(s) | 203, 593, 996, 1545 |
| Mva1269I | GAATGC | 1 cut(s) | 416 |
| MvaI | CCWGG | 4 cut(s) | 203, 593, 996, 1545 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 413, 1554, 1583 |
| NdeI | CATATG | 2 cut(s) | 795, 1694 |
| NdeII | GATC | 9 cut(s) | 103, 603, 967, 1036, 1125, 1462, 1675, 1711, 2007 |
| NlaIV | GGNNCC | 4 cut(s) | 1105, 1127, 1542, 2055 |
| NmuCI | GTSAC | 4 cut(s) | 218, 1523, 1640, 1880 |
| NsiI | ATGCAT | 3 cut(s) | 160, 317, 1700 |
| NspI | RCATGY | 2 cut(s) | 257, 442 |
| OliI | CACNNNNGTG | 1 cut(s) | 216 |
| PagI | TCATGA | 3 cut(s) | 1012, 1087, 1609 |
| PceI | AGGCCT | 1 cut(s) | 2020 |
| PctI | GAATGC | 1 cut(s) | 416 |
| PfeI | GAWTC | 1 cut(s) | 1228 |
| PflFI | GACNNNGTC | 1 cut(s) | 1073 |
| PkrI | GCNGC | 3 cut(s) | 54, 559, 715 |
| PleI | GAGTC | 1 cut(s) | 174 |
| PmaCI | CACGTG | 1 cut(s) | 218 |
| PmlI | CACGTG | 1 cut(s) | 218 |
| PpsI | GAGTC | 1 cut(s) | 174 |
| Ppu21I | YACGTR | 1 cut(s) | 218 |
| PsiI | TTATAA | 3 cut(s) | 786, 1008, 1385 |
| Psp6I | CCWGG | 4 cut(s) | 201, 591, 994, 1543 |
| PspCI | CACGTG | 1 cut(s) | 218 |
| PspEI | GGTNACC | 1 cut(s) | 1523 |
| PspGI | CCWGG | 4 cut(s) | 201, 591, 994, 1543 |
| PspN4I | GGNNCC | 4 cut(s) | 1105, 1127, 1542, 2055 |
| PspPI | GGNCC | 2 cut(s) | 1061, 2053 |
| PsuI | RGATCY | 4 cut(s) | 103, 967, 1125, 1675 |
| PsyI | GACNNNGTC | 1 cut(s) | 1073 |
| RsaI | GTAC | 4 cut(s) | 147, 737, 947, 1002 |
| RsaNI | GTAC | 4 cut(s) | 146, 736, 946, 1001 |
| RseI | CAYNNNNRTG | 2 cut(s) | 132, 216 |
| SaqAI | TTAA | 9 cut(s) | 399, 1098, 1176, 1302, 1484, 1622, 1727, 1931, 1962 |
| SatI | GCNGC | 3 cut(s) | 53, 558, 714 |
| Sau3AI | GATC | 9 cut(s) | 103, 603, 967, 1036, 1125, 1462, 1675, 1711, 2007 |
| Sau96I | GGNCC | 2 cut(s) | 1061, 2053 |
| ScaI | AGTACT | 1 cut(s) | 1002 |
| SchI | GAGTC | 1 cut(s) | 175 |
| ScrFI | CCNGG | 4 cut(s) | 203, 593, 996, 1545 |
| SduI | GDGCHC | 1 cut(s) | 1588 |
| SfaNI | GCATC | 9 cut(s) | 128, 184, 394, 1102, 1185, 1408, 1504, 1932, 1979 |
| SfcI | CTRYAG | 1 cut(s) | 1978 |
| SinI | GGWCC | 2 cut(s) | 1061, 2053 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 132, 216 |
| SmlI | CTYRAG | 3 cut(s) | 1409, 1565, 1946 |
| SmoI | CTYRAG | 3 cut(s) | 1409, 1565, 1946 |
| SseBI | AGGCCT | 1 cut(s) | 2020 |
| SsiI | CCGC | 3 cut(s) | 281, 1107, 1267 |
| SspMI | CTAG | 3 cut(s) | 56, 1772, 1907 |
| StuI | AGGCCT | 1 cut(s) | 2020 |
| StyD4I | CCNGG | 4 cut(s) | 201, 591, 994, 1543 |
| StyI | CCWWGG | 1 cut(s) | 443 |
| TaaI | ACNGT | 3 cut(s) | 308, 1381, 1783 |
| TaiI | ACGT | 3 cut(s) | 147, 220, 765 |
| TaqI | TCGA | 3 cut(s) | 12, 932, 1219 |
| TatI | WGTACW | 1 cut(s) | 1000 |
| TfiI | GAWTC | 1 cut(s) | 1228 |
| Tru1I | TTAA | 9 cut(s) | 399, 1098, 1176, 1302, 1484, 1622, 1727, 1931, 1962 |
| Tru9I | TTAA | 9 cut(s) | 399, 1098, 1176, 1302, 1484, 1622, 1727, 1931, 1962 |
| TscAI | CASTG | 2 cut(s) | 918, 1586 |
| TseFI | GTSAC | 4 cut(s) | 218, 1523, 1640, 1880 |
| TseI | GCWGC | 3 cut(s) | 52, 557, 713 |
| Tsp45I | GTSAC | 4 cut(s) | 218, 1523, 1640, 1880 |
| TspGWI | ACGGA | 1 cut(s) | 890 |
| TspRI | CASTG | 2 cut(s) | 918, 1586 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1073 |
| VpaK11BI | GGWCC | 2 cut(s) | 1061, 2053 |
| XbaI | TCTAGA | 1 cut(s) | 1771 |
| XceI | RCATGY | 2 cut(s) | 257, 442 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1669 |
| XmiI | GTMKAC | 1 cut(s) | 299 |
| XspI | CTAG | 3 cut(s) | 56, 1772, 1907 |
| ZrmI | AGTACT | 1 cut(s) | 1002 |
| Zsp2I | ATGCAT | 3 cut(s) | 160, 317, 1700 |