FvH4_2g03490

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000103
Physical Location & Seq
Reverse (-)
2812278 .. 2816978
4701 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g03490.t1

Sequence Viewer

Length: 1608 bp
ATGTCCATATATGCAGGGTTTAAGTGCGGTAAATGTAAGAAGATTATGACTGAACCAGTTACTACACCATGCGGTCATAACTTCTGTAAAGCTTGTCTGCAAGGTGCATTTGCTGGTATGATCAGTTTAATTAAACAAAGGACATGCCAGGGCAGAAGAACATTGCGATCACAAAAGAACGTCATGAAGTGCCCAGATTGTCCACAGGACATAGCTGAATTTATTCAAAATCCACAGAATTACTCCAGCAGAAAGAGGAAGATGGACAAGTGGAAGAAACGTACTGAAGAAACTTACAATGCCAGTGAAGCCGAAACAGAAGGAGCTGTTGAACAAAAGAATCCAAGTCACAAGCGCAAAAGGTCAAGCAATGGTGACAATTTGTTGGATATATGCAACTTACCAACTGATGTTATGATACAAATTTTGTCACGTTTGACACTCAAGGAGGCAGTGAGGACAAGTATTTTATCAAGCAAGTGGAGGTATAAATCTGCTATGCTTCCAGTTCTTGTGTTTGATGGCAGATGTGTCTCGAAGACTACTGGAAGCCATACAACCATTGTCAACATTGTTGATCATGTACTTTTAGCTCACATTGACCCCGTAGAGAAATTCCTGCCTTCTTACAGATTTGATAAACTCTCCAGTAGAGACATCGATCGATGGGTTCTTCATCTGTCAAGAAATTCTGTCAAACAGATCATGCTCGACAATCGGAAAGCGCCTCTCTATAAGCTGCCATCATGTTTTTTCTCTTGTCAAGATATGACTCGTTTAGATTTATGTCATTGTATGCTAATACCACCACCAACATTTCAAGGATTCAAGAGTTTGAAGCAACTTGATATTGACGATGTTACCATGGCCCAAGATGTGTTTGAACAATTGATAGTTTGTTGCCCTCTGCTTAAGGCATTGACTTGTATAAGCTGTGACGGCTTCAGCCATATAAAGATTAATGCACCAAAACTCCATTTCCTTCATGTTGGAGGTCCTTTTGAGGATATTAATCTTGAGAATACTGTCAACCTTGTTGAAGTCATCATAATTACGGGCACCACTAATCACAAACCATCGGTGGGCAGTTCTTGCAATTTGGTCAAGTTTGTTGATCAGCTGCCTCACGTTAAAAGGCTCACAATAGGTTTCGACTTTTTGGAGTACTTGGCTGTTAACATTGGTGACTTGCCCCGAGAGCTTCCTACATCATGTCTGCATCTGAACTTTCTTTCTATAGACATATACTTTGATAAGGAGGAAACTTTAACTGTTCTATGCCTTCTGAGAAGCTGCCCTGCTCTACAAGAACTAAGGATTCGGGCGCTCCAGGCAGTGTATCATGCTGAGGTTGCAGAAGATAATTCTTGGCTGGATCATGACAATCACAATTGCTCATTCACCCAACTGAGAATTGTACATATGACAGAAGTCTCTGGTGTGAAAGCCGAACTAGATTTCATCAGATATCTGCTTTTAAATTCACCTGTGCTTGAGATATTCACTGTAAAGCCTGCTTCTACCGATGTTTCTAGGGATATGGTAAAGAAGCTGCTACGGTTTGGGCGCGCCTCGGTGCATTCAGAGATAATCTACTTGGACCCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

536

Amino Acids

60.76

Weight (kDa)

8.58

Isoelectric Point (pI)

51.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_UBOX PF13445 9 - 47 9.3e-08 RING-type zinc-finger
F-box PF00646 131 - 168 1e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 210 - 508 7.9e-15 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 220 - 440 1.7e-21 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000103)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g03461 FvH4_2g03490 FvH4_2g03500 FvH4_2g03500 FvH4_2g03510 FvH4_2g03510 FvH4_2g03521 FvH4_2g03521 FvH4_2g27100 FvH4_2g27110 FvH4_2g27130 FvH4_2g27150 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_2g40420 FvH4_3g20160 FvH4_3g20160 FvH4_3g33042 FvH4_4g17790 FvH4_5g14272 FvH4_5g14273 FvH4_5g20540
malus_domestica MD00G1039500.v1.1 MD05G1103500.v1.1 MD05G1103900.v1.1 MD05G1104300.v1.1 MD05G1104400.v1.1 MD05G1104600.v1.1 MD05G1157200.v1.1 MD05G1157700.v1.1 MD05G1157800.v1.1 MD08G1037400.v1.1 MD10G1108900.v1.1
prunus_persica Prupe.1G384700_v2.0.a1 Prupe.1G384700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148700_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G148900_v2.0.a1 Prupe.8G149000_v2.0.a1
pyrus_communis pycom05g10100 pycom05g14980 pycom08g02980 pycom10g09400 pycom15g02910
rosa_chinensis RchiOBHm_Chr3g0455511 RchiOBHm_Chr4g0421851 RchiOBHm_Chr4g0421921 RchiOBHm_Chr4g0421931 RchiOBHm_Chr5g0033951 RchiOBHm_Chr5g0033971 RchiOBHm_Chr6g0248641 RchiOBHm_Chr6g0248651 RchiOBHm_Chr6g0248671 RchiOBHm_Chr6g0248681 RchiOBHm_Chr6g0248731 RchiOBHm_Chr6g0248741 RchiOBHm_Chr6g0248771 RchiOBHm_Chr6g0248791 RchiOBHm_Chr6g0248851 RchiOBHm_Chr6g0248871 RchiOBHm_Chr6g0248881 RchiOBHm_Chr6g0248921 RchiOBHm_Chr6g0252081 RchiOBHm_Chr6g0252091 RchiOBHm_Chr6g0252101 RchiOBHm_Chr6g0267131 RchiOBHm_Chr6g0295981 RchiOBHm_Chr6g0295991 RchiOBHm_Chr6g0296021 RchiOBHm_Chr6g0300311 RchiOBHm_Chr7g0182631
rosa_laevigata RLG00000005114 RLG00000007652 RLG00000011348 RLG00000011741 RLG00000011742 RLG00000011743 RLG00000011744 RLG00000011745 RLG00000011747 RLG00000011748 RLG00000011749 RLG00000011750 RLG00000014028 RLG00000014036 RLG00000015111 RLG00000015113 RLG00000015115 RLG00000015117 RLG00000015119 RLG00000015123 RLG00000015124 RLG00000015127 RLG00000015128 RLG00000015129 RLG00000015132 RLG00000033513 RLG00000034608
rosa_multiflora Rmu_co8062356.1_g000001 Rmu_co8494777.1_g000001 Rmu_sc0000229.1_g000003 Rmu_sc0000529.1_g000001 Rmu_sc0000529.1_g000002 Rmu_sc0000529.1_g000003 Rmu_sc0001014.1_g000001 Rmu_sc0001150.1_g000007 Rmu_sc0001562.1_g000002 Rmu_sc0001562.1_g000004 Rmu_sc0001562.1_g000005 Rmu_sc0001562.1_g000017 Rmu_sc0001562.1_g000033 Rmu_sc0001562.1_g000035 Rmu_sc0001670.1_g000022 Rmu_sc0002393.1_g000007 Rmu_sc0002393.1_g000008 Rmu_sc0002393.1_g000009 Rmu_sc0002393.1_g000010 Rmu_sc0002393.1_g000011 Rmu_sc0002393.1_g000021 Rmu_sc0002393.1_g000023 Rmu_sc0002393.1_g000035 Rmu_sc0002393.1_g000037 Rmu_sc0002489.1_g000003 Rmu_sc0002938.1_g000047 Rmu_sc0003139.1_g000013 Rmu_sc0003139.1_g000014 Rmu_sc0003139.1_g000015 Rmu_sc0003139.1_g000017 Rmu_sc0004275.1_g000033 Rmu_sc0004275.1_g000036 Rmu_sc0004703.1_g000001 Rmu_sc0006276.1_g000003 Rmu_sc0010676.1_g000003 Rmu_sc0010676.1_g000004 Rmu_sc0010676.1_g000006 Rmu_sc0010676.1_g000007 Rmu_sc0013953.1_g000004 Rmu_ssc0000388.1_g000016
rosa_roxburghii Rroxscaffold_1G00015220 Rroxscaffold_1G00046270 Rroxscaffold_2G00090150 Rroxscaffold_2G00120650 Rroxscaffold_2G00123380 Rroxscaffold_3G00234080 Rroxscaffold_3G00271110 Rroxscaffold_7G00167900 Rroxscaffold_7G00171950 Rroxscaffold_7G00171970 Rroxscaffold_7G00171980 Rroxscaffold_7G00171990 Rroxscaffold_7G00172000 Rroxscaffold_7G00201050 Rroxscaffold_7G00212860 Rroxscaffold_7G00212880 Rroxscaffold_7G00212920 Rroxscaffold_7G00212940 Rroxscaffold_7G00212990 Rroxscaffold_7G00213060 Rroxscaffold_7G00213070 Rroxscaffold_7G00213080 Rroxscaffold_7G00213100 Rroxscaffold_7G00213110 Rroxscaffold_7G00213120 Rroxscaffold_7G00213130 Rroxscaffold_7G00213140 Rroxscaffold_7G00217950
rosa_rugosa Rorug04G0089100 Rorug04G0176100 Rorug05G0143700 Rorug05G0532600 Rorug05G0532700 Rorug05G0532800 Rorug05G0533100 Rorug05G0533200 Rorug05G0533300 Rorug05G0533400 Rorug05G0533500 Rorug05G0533500 Rorug05G0533700 Rorug05G0533800 Rorug05G0533900 Rorug05G0534000 Rorug05G0534100.1 Rorug05G0534200 Rorug06G0029200 Rorug06G0029300 Rorug06G0029400 Rorug06G0255600 Rorug06G0255800 Rorug06G0255800 Rorug06G0255900 Rorug06G0255900 Rorug06G0255900 Rorug06G0256000 Rorug06G0256100 Rorug06G0256300 Rorug06G0256400 Rorug06G0294900 Rorug06G0448600 Rorug06G0448600 Rorug07G0094000
rosa_samantha Rh3BG070200 Rh3CG325900 Rh5BG235500 Rh6AG049500 Rh6AG049600 Rh6AG049800 Rh6AG049900 Rh6AG050100 Rh6AG050200 Rh6AG050300 Rh6AG050400 Rh6AG050500 Rh6AG050800 Rh6AG051100 Rh6AG051500 Rh6AG151100 Rh6AG369300 Rh6AG369500 Rh6AG369600 Rh6AG369800 Rh6AG369900 Rh6AG407600 Rh6DG038100 Rh7CG053500 Rh7CG053600 Rh7DG051800
rosa_wichuraiana Rw3G005370 Rw3G025850 Rw5G021490 Rw6G004290 Rw6G004300 Rw6G004310 Rw6G004320 Rw6G004330 Rw6G004340 Rw6G004390 Rw6G004410 Rw6G004420 Rw6G004430 Rw6G004450 Rw6G004460 Rw6G004490 Rw6G004510 Rw6G004590 Rw6G013080 Rw6G032210 Rw6G032220 Rw6G032230 Rw6G032250 Rw6G035640 Rw7G004270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1058
AccII CGCG 1 cut(s) 1569
AciI CCGC 2 cut(s) 27, 72
AclWI GGATC 1 cut(s) 1383
AcsI RAATTY 5 cut(s) 218, 423, 614, 688, 1480
AcuI CTGAAG 2 cut(s) 306, 928
AfaI GTAC 4 cut(s) 283, 585, 1166, 1419
AfiI CCNNNNNNNGG 1 cut(s) 1082
AflII CTTAAG 1 cut(s) 911
AgsI TTSAA 7 cut(s) 227, 332, 821, 829, 838, 884, 1040
AjnI CCWGG 2 cut(s) 147, 1329
Alw26I GTCTC 3 cut(s) 538, 648, 1438
AlwI GGATC 1 cut(s) 1383
Ama87I CYCGRG 1 cut(s) 1194
AoxI GGCC 1 cut(s) 867
ApeKI GCWGC 4 cut(s) 739, 1120, 1293, 1552
ApoI RAATTY 5 cut(s) 218, 423, 614, 688, 1480
ArsI GACNNNNNNTTYG 2 cut(s) 1232, 1264
AscI GGCGCGCC 1 cut(s) 1567
AseI ATTAAT 2 cut(s) 960, 1011
Asp700I GAANNNNTTC 1 cut(s) 222
AspLEI GCGC 5 cut(s) 357, 727, 1327, 1569, 1571
AspS9I GGNCC 3 cut(s) 868, 995, 1600
AsuHPI GGTGA 4 cut(s) 386, 1196, 1393, 1476
AvaI CYCGRG 1 cut(s) 1194
AvaII GGWCC 2 cut(s) 995, 1600
BaeGI GKGCMC 2 cut(s) 194, 1061
BanI GGYRCC 1 cut(s) 1058
BbsI GAAGAC 1 cut(s) 545
BbvCI CCTCAGC 1 cut(s) 1347
BbvI GCAGC 4 cut(s) 726, 1107, 1280, 1539
BccI CCATC 5 cut(s) 256, 515, 660, 751, 1084
BceAI ACGGC 1 cut(s) 955
BciT130I CCWGG 2 cut(s) 149, 1331
BclI TGATCA 3 cut(s) 120, 577, 1114
BcoDI GTCTC 3 cut(s) 538, 648, 1438
BfaI CTAG 2 cut(s) 1454, 1533
BfmI CTRYAG 1 cut(s) 1236
BfoI RGCGCY 2 cut(s) 728, 1328
BfrI CTTAAG 1 cut(s) 911
BisI GCNGC 4 cut(s) 740, 1121, 1294, 1553
BlsI GCNGC 4 cut(s) 741, 1122, 1295, 1554
BmcAI AGTACT 1 cut(s) 1166
Bme1390I CCNGG 2 cut(s) 149, 1331
Bme18I GGWCC 2 cut(s) 995, 1600
BmeT110I CYCGRG 1 cut(s) 1194
BmgT120I GGNCC 3 cut(s) 868, 995, 1600
BmiI GGNNCC 2 cut(s) 1060, 1602
BmrFI CCNGG 2 cut(s) 149, 1331
BmsI GCATC 1 cut(s) 1228
BoxI GACNNNNGTC 1 cut(s) 1430
BpiI GAAGAC 1 cut(s) 545
BpmI CTGGAG 3 cut(s) 229, 631, 1313
Bpu10I CCTNAGC 1 cut(s) 1347
BpuEI CTTGAG 3 cut(s) 428, 1037, 1514
Bsa29I ATCGAT 2 cut(s) 660, 664
BsaBI GATNNNNATC 1 cut(s) 1011
BsaJI CCNNGG 3 cut(s) 148, 864, 1572
BsaXI ACNNNNNCTCC 2 cut(s) 957, 987
Bsc4I CCNNNNNNNGG 1 cut(s) 1082
Bse1I ACTGG 5 cut(s) 56, 303, 506, 550, 648
Bse3DI GCAATG 2 cut(s) 161, 376
Bse8I GATNNNNATC 1 cut(s) 1011
BseBI CCWGG 2 cut(s) 149, 1331
BseCI ATCGAT 2 cut(s) 660, 664
BseDI CCNNGG 3 cut(s) 148, 864, 1572
BseJI GATNNNNATC 1 cut(s) 1011
BseLI CCNNNNNNNGG 1 cut(s) 1082
BseMI GCAATG 2 cut(s) 161, 376
BseMII CTCAG 3 cut(s) 1277, 1338, 1400
BseNI ACTGG 5 cut(s) 56, 303, 506, 550, 648
BsePI GCGCGC 1 cut(s) 1567
BseSI GKGCMC 2 cut(s) 194, 1061
BseXI GCAGC 4 cut(s) 726, 1107, 1280, 1539
Bsh1236I CGCG 1 cut(s) 1569
Bsh1285I CGRYCG 1 cut(s) 664
BshFI GGCC 1 cut(s) 869
BshNI GGYRCC 1 cut(s) 1058
BshVI ATCGAT 2 cut(s) 660, 664
BsiEI CGRYCG 1 cut(s) 664
BsiHKCI CYCGRG 1 cut(s) 1194
BslI CCNNNNNNNGG 1 cut(s) 1082
BsmAI GTCTC 3 cut(s) 538, 648, 1438
BsmI GAATGC 1 cut(s) 1579
BsnI GGCC 1 cut(s) 869
BsoBI CYCGRG 1 cut(s) 1194
Bsp1286I GDGCHC 2 cut(s) 194, 1061
Bsp1407I TGTACA 1 cut(s) 1417
Bsp143I GATC 7 cut(s) 120, 167, 577, 661, 702, 1114, 1375
Bsp19I CCATGG 1 cut(s) 864
BspACI CCGC 2 cut(s) 27, 72
BspANI GGCC 1 cut(s) 869
BspCNI CTCAG 3 cut(s) 1278, 1339, 1401
BspDI ATCGAT 2 cut(s) 660, 664
BspFNI CGCG 1 cut(s) 1569
BspHI TCATGA 2 cut(s) 183, 1378
BspLI GGNNCC 2 cut(s) 1060, 1602
BspPI GGATC 1 cut(s) 1383
BspT107I GGYRCC 1 cut(s) 1058
BspTI CTTAAG 1 cut(s) 911
BsrDI GCAATG 2 cut(s) 161, 376
BsrGI TGTACA 1 cut(s) 1417
BsrI ACTGG 5 cut(s) 56, 303, 506, 550, 648
BssECI CCNNGG 3 cut(s) 148, 864, 1572
BssHII GCGCGC 1 cut(s) 1567
BssMI GATC 7 cut(s) 120, 167, 577, 661, 702, 1114, 1375
BssT1I CCWWGG 1 cut(s) 864
Bst2UI CCWGG 2 cut(s) 149, 1331
Bst4CI ACNGT 4 cut(s) 1027, 1273, 1507, 1560
BstAFI CTTAAG 1 cut(s) 911
BstAPI GCANNNNNTGC 1 cut(s) 1092
BstAUI TGTACA 1 cut(s) 1417
BstC8I GCNNGC 2 cut(s) 1515, 1569
BstDEI CTNAG 4 cut(s) 1286, 1313, 1347, 1409
BstDSI CCRYGG 1 cut(s) 864
BstFNI CGCG 1 cut(s) 1569
BstH2I RGCGCY 2 cut(s) 728, 1328
BstHHI GCGC 5 cut(s) 357, 727, 1327, 1569, 1571
BstKTI GATC 7 cut(s) 123, 170, 580, 664, 705, 1117, 1378
BstMAI GTCTC 3 cut(s) 538, 648, 1438
BstMBI GATC 7 cut(s) 120, 167, 577, 661, 702, 1114, 1375
BstMCI CGRYCG 1 cut(s) 664
BstMWI GCNNNNNNNGC 6 cut(s) 308, 939, 1092, 1198, 1331, 1352
BstNI CCWGG 2 cut(s) 149, 1331
BstNSI RCATGY 1 cut(s) 147
BstPAI GACNNNNGTC 1 cut(s) 1430
BstSCI CCNGG 2 cut(s) 147, 1329
BstSFI CTRYAG 1 cut(s) 1236
BstSLI GKGCMC 2 cut(s) 194, 1061
BstUI CGCG 1 cut(s) 1569
BstV1I GCAGC 4 cut(s) 726, 1107, 1280, 1539
BstV2I GAAGAC 1 cut(s) 545
Bsu15I ATCGAT 2 cut(s) 660, 664
BsuRI GGCC 1 cut(s) 869
BsuTUI ATCGAT 2 cut(s) 660, 664
BtgI CCRYGG 1 cut(s) 864
BtsI GCAGTG 2 cut(s) 459, 1341
BtsIMutI CAGTG 4 cut(s) 310, 459, 1341, 1503
Cac8I GCNNGC 2 cut(s) 1515, 1569
CciI TCATGA 2 cut(s) 183, 1378
CfoI GCGC 5 cut(s) 357, 727, 1327, 1569, 1571
Cfr13I GGNCC 3 cut(s) 868, 995, 1600
ClaI ATCGAT 2 cut(s) 660, 664
Csp6I GTAC 4 cut(s) 282, 584, 1165, 1418
CviQI GTAC 4 cut(s) 282, 584, 1165, 1418
DdeI CTNAG 4 cut(s) 1286, 1313, 1347, 1409
DpnI GATC 7 cut(s) 122, 169, 579, 663, 704, 1116, 1377
DpnII GATC 7 cut(s) 120, 167, 577, 661, 702, 1114, 1375
DraI TTTAAA 1 cut(s) 1479
Eco130I CCWWGG 1 cut(s) 864
Eco32I GATATC 1 cut(s) 1469
Eco47I GGWCC 2 cut(s) 995, 1600
Eco57I CTGAAG 2 cut(s) 306, 928
Eco88I CYCGRG 1 cut(s) 1194
EcoO109I RGGNCCY 1 cut(s) 995
EcoRII CCWGG 2 cut(s) 147, 1329
EcoRV GATATC 1 cut(s) 1469
EcoT14I CCWWGG 1 cut(s) 864
ErhI CCWWGG 1 cut(s) 864
FauNDI CATATG 1 cut(s) 1422
FbaI TGATCA 3 cut(s) 120, 577, 1114
Fnu4HI GCNGC 4 cut(s) 740, 1121, 1294, 1553
Fsp4HI GCNGC 4 cut(s) 740, 1121, 1294, 1553
FspBI CTAG 2 cut(s) 1454, 1533
GlaI GCGC 5 cut(s) 356, 726, 1326, 1568, 1570
GluI GCNGC 4 cut(s) 740, 1121, 1294, 1553
GsuI CTGGAG 3 cut(s) 229, 631, 1313
HaeII RGCGCY 2 cut(s) 728, 1328
HaeIII GGCC 1 cut(s) 869
HhaI GCGC 5 cut(s) 357, 727, 1327, 1569, 1571
Hin6I GCGC 5 cut(s) 355, 725, 1325, 1567, 1569
HinP1I GCGC 5 cut(s) 355, 725, 1325, 1567, 1569
HincII GTYRAC 3 cut(s) 568, 1030, 1177
HindII GTYRAC 3 cut(s) 568, 1030, 1177
HindIII AAGCTT 1 cut(s) 90
HinfI GANTC 4 cut(s) 340, 772, 825, 1318
HpaI GTTAAC 1 cut(s) 1177
HphI GGTGA 4 cut(s) 386, 1196, 1393, 1476
Hpy166II GTNNAC 4 cut(s) 203, 568, 1030, 1177
Hpy188I TCNGA 5 cut(s) 720, 1224, 1287, 1466, 1585
Hpy188III TCNNGA 7 cut(s) 184, 535, 684, 764, 829, 1016, 1379
Hpy8I GTNNAC 4 cut(s) 203, 568, 1030, 1177
HpyAV CCTTC 4 cut(s) 314, 633, 992, 1292
HpyCH4III ACNGT 4 cut(s) 1027, 1273, 1507, 1560
HpyCH4IV ACGT 4 cut(s) 180, 280, 433, 1128
HpyCH4V TGCA 9 cut(s) 14, 100, 107, 396, 965, 1095, 1219, 1355, 1579
HpyF10VI GCNNNNNNNGC 6 cut(s) 308, 939, 1092, 1198, 1331, 1352
HpyF3I CTNAG 4 cut(s) 1286, 1313, 1347, 1409
HpySE526I ACGT 4 cut(s) 180, 280, 433, 1128
HspAI GCGC 5 cut(s) 355, 725, 1325, 1567, 1569
Ksp22I TGATCA 3 cut(s) 120, 577, 1114
KspAI GTTAAC 1 cut(s) 1177
Kzo9I GATC 7 cut(s) 120, 167, 577, 661, 702, 1114, 1375
LmnI GCTCC 2 cut(s) 323, 1332
Lsp1109I GCAGC 4 cut(s) 726, 1107, 1280, 1539
LweI GCATC 1 cut(s) 1228
MaeI CTAG 2 cut(s) 1454, 1533
MaeII ACGT 4 cut(s) 180, 280, 433, 1128
MaeIII GTNAC 7 cut(s) 58, 347, 374, 429, 859, 935, 1184
MalI GATC 7 cut(s) 122, 169, 579, 663, 704, 1116, 1377
MboI GATC 7 cut(s) 120, 167, 577, 661, 702, 1114, 1375
MboII GAAGA 8 cut(s) 52, 168, 271, 286, 299, 550, 665, 1370
MfeI CAATTG 2 cut(s) 887, 1390
MhlI GDGCHC 2 cut(s) 194, 1061
MlyI GAGTC 1 cut(s) 766
MmeI TCCRAC 2 cut(s) 366, 970
MroXI GAANNNNTTC 1 cut(s) 222
MspA1I CMGCKG 1 cut(s) 1120
MspCI CTTAAG 1 cut(s) 911
MspR9I CCNGG 2 cut(s) 149, 1331
MunI CAATTG 2 cut(s) 887, 1390
Mva1269I GAATGC 1 cut(s) 1579
MvaI CCWGG 2 cut(s) 149, 1331
MvnI CGCG 1 cut(s) 1569
MwoI GCNNNNNNNGC 6 cut(s) 308, 939, 1092, 1198, 1331, 1352
NcoI CCATGG 1 cut(s) 864
NdeI CATATG 1 cut(s) 1422
NdeII GATC 7 cut(s) 120, 167, 577, 661, 702, 1114, 1375
NlaIV GGNNCC 2 cut(s) 1060, 1602
NmuCI GTSAC 5 cut(s) 347, 374, 429, 935, 1184
NspI RCATGY 1 cut(s) 147
PacI TTAATTAA 1 cut(s) 132
PagI TCATGA 2 cut(s) 183, 1378
PalAI GGCGCGCC 1 cut(s) 1567
PauI GCGCGC 1 cut(s) 1567
PctI GAATGC 1 cut(s) 1579
PdmI GAANNNNTTC 1 cut(s) 222
PfeI GAWTC 3 cut(s) 340, 825, 1318
PkrI GCNGC 4 cut(s) 741, 1122, 1295, 1554
Ple19I CGATCG 1 cut(s) 664
PleI GAGTC 1 cut(s) 766
PpsI GAGTC 1 cut(s) 766
PpuMI RGGWCCY 1 cut(s) 995
PshAI GACNNNNGTC 1 cut(s) 1430
PshBI ATTAAT 2 cut(s) 960, 1011
Psp5II RGGWCCY 1 cut(s) 995
Psp6I CCWGG 2 cut(s) 147, 1329
PspGI CCWGG 2 cut(s) 147, 1329
PspN4I GGNNCC 2 cut(s) 1060, 1602
PspPI GGNCC 3 cut(s) 868, 995, 1600
PspPPI RGGWCCY 1 cut(s) 995
PteI GCGCGC 1 cut(s) 1567
PvuI CGATCG 1 cut(s) 664
PvuII CAGCTG 1 cut(s) 1120
RsaI GTAC 4 cut(s) 283, 585, 1166, 1419
RsaNI GTAC 4 cut(s) 282, 584, 1165, 1418
SatI GCNGC 4 cut(s) 740, 1121, 1294, 1553
Sau3AI GATC 7 cut(s) 120, 167, 577, 661, 702, 1114, 1375
Sau96I GGNCC 3 cut(s) 868, 995, 1600
ScaI AGTACT 1 cut(s) 1166
SchI GAGTC 1 cut(s) 766
ScrFI CCNGG 2 cut(s) 149, 1331
SduI GDGCHC 2 cut(s) 194, 1061
SfaNI GCATC 1 cut(s) 1228
SfcI CTRYAG 1 cut(s) 1236
SgsI GGCGCGCC 1 cut(s) 1567
SinI GGWCC 2 cut(s) 995, 1600
SmlI CTYRAG 4 cut(s) 443, 911, 1016, 1493
SmoI CTYRAG 4 cut(s) 443, 911, 1016, 1493
SsiI CCGC 2 cut(s) 27, 72
SspMI CTAG 2 cut(s) 1454, 1533
StyD4I CCNGG 2 cut(s) 147, 1329
StyI CCWWGG 1 cut(s) 864
TaaI ACNGT 4 cut(s) 1027, 1273, 1507, 1560
TaiI ACGT 4 cut(s) 183, 283, 436, 1131
TaqI TCGA 5 cut(s) 536, 660, 664, 711, 1152
TatI WGTACW 3 cut(s) 583, 1164, 1417
TfiI GAWTC 3 cut(s) 340, 825, 1318
TscAI CASTG 4 cut(s) 310, 459, 1341, 1510
TseFI GTSAC 5 cut(s) 347, 374, 429, 935, 1184
TseI GCWGC 4 cut(s) 739, 1120, 1293, 1552
Tsp45I GTSAC 5 cut(s) 347, 374, 429, 935, 1184
TspDTI ATGAA 4 cut(s) 200, 665, 974, 1450
TspRI CASTG 4 cut(s) 310, 459, 1341, 1510
Vha464I CTTAAG 1 cut(s) 911
VpaK11BI GGWCC 2 cut(s) 995, 1600
VspI ATTAAT 2 cut(s) 960, 1011
XapI RAATTY 5 cut(s) 218, 423, 614, 688, 1480
XceI RCATGY 1 cut(s) 147
XmnI GAANNNNTTC 1 cut(s) 222
XspI CTAG 2 cut(s) 1454, 1533
ZrmI AGTACT 1 cut(s) 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.