Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0006124

Physical Location & Seq

Genomic Coordinates Reverse (-)

18106815 .. 18113676

Gene Structure 6862 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G188100.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 969 bp

ATGGTGGAGATGAAGGAGGAGAGAATGGCGATATTCAAAGGCAGAGAAAAATTCGGGTCCAATGCTTTGCACACGGTTGTGGCTTTGGGCATATGGCTGGGGACTATCCATTTCAACGTGATTTTGGTCTTCTTCGCCATCTTATTCCTTCCTGTTTCCAAGGCCCTCCTTGTAATTGGGTTGCTGCTATTGTTTATGATAATCCCAGTTGATGATAAAAGCAAAATTGGCCGATCACTATCCAGGTACATATGTAAGCATGCTTGTGCTTATTTTCCAGTGACTCTGTATGCAGAGGATATACATGCCTTTGATCCTAATCGATCTTATGTTTTTGGTTATGAACCACATTCAGTTTTGCCAATTGGTGTTGTTGCACTTGCTGACCTTACTGGGTTCCTACCTCTCACCAAAATTAAGGTCCTTGCAAGTAGCGCTGTGTTCTACACACCATTCCTAAGACATATATGGACATGGTTGGGTCTTACACCAGCCACAAAGAGTAATTTTATCTCCCACTTATCCGCTGGTTATAGTTGCATCATTGTGCCTGGTGGAGTGCAGGAGACATTTTATATGGAGCATGGCACTGAGATAGCATTTCTCAAGTCGAGAAGAGGATTTGTTCGCATAGCCATGGCGATGGGCCATCCCCTGGTTCCAGTTTTCTGCTTTGGTCAGTCAGATGTTTATAAGTGGTGGAAGCCAAGTGGGGAGTTATTTTCGAAGTTTGCCAGAGCTATCAAGTTCACCCCAATTTTCTTCTGGGGAATATTTGGATCTCCTGTGCCCTACAGGCATCCAATGCACGTGGTGGTAGGAAGACCAATCGAACTCAAGAAAACCCCACAACCAACCATGGAAGAGGTCAATGAAGTACACGGTCAGTTTGTTGCAGCACTACAGGATCTTTTCGAACGGCACAAGGTGCGGGTTGGTCATGCTGATCTTCAGTTGAAAATTCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005811 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006996 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0019432 GO:0031984 GO:0034389 GO:0042175 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:0071840 GO:0098827 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 ko04975 map00561 map04975

Pfam Domains

Protein Families

DAGAT

Protein Analysis

323

Amino Acids

36.37

Weight (kDa)

9.42

Isoelectric Point (pI)

43.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51520
fragaria_vesca	FvH4_1g09760 FvH4_1g09760
malus_domestica	MD02G1107700.v1.1 MD02G1107800.v1.1 MD15G1227200.v1.1
prunus_persica	Prupe.7G188100_v2.0.a1 Prupe.7G188100_v2.0.a1 Prupe.7G188100_v2.0.a1
pyrus_communis	pycom02g08660 pycom15g20210
rosa_chinensis	RchiOBHm_Chr2g0096691
rosa_laevigata	RLG00000016662 RLG00000036260
rosa_multiflora	Rmu_sc0003565.1_g000021
rosa_roxburghii	Rroxscaffold_2G00145410 Rroxscaffold_6G00397690
rosa_rugosa	Rorug02G0059600 Rorug02G0059700 Rorug04G0089100
rosa_samantha	Rh2AG107100 Rh2BG109500 Rh2CG111300 Rh2DG110900 Rh5BG533300 Rh6AG230400
rosa_wichuraiana	Rw2G008300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	693
AccB7I	CCANNNNNTGG	1 cut(s)	655
AciI	CCGC	2 cut(s)	525, 931
AclWI	GGATC	3 cut(s)	308, 787, 915
AcoI	YGGCCR	1 cut(s)	229
AcsI	RAATTY	2 cut(s)	50, 960
AcuI	CTGAAG	1 cut(s)	935
AcvI	CACGTG	1 cut(s)	811
AdeI	CACNNNGTG	2 cut(s)	814, 928
AfaI	GTAC	2 cut(s)	248, 879
AfeI	AGCGCT	1 cut(s)	436
AfiI	CCNNNNNNNGG	1 cut(s)	655
AgsI	TTSAA	3 cut(s)	37, 115, 958
AjnI	CCWGG	3 cut(s)	242, 550, 654
AleI	CACNNNNGTG	1 cut(s)	77
AluBI	AGCT	1 cut(s)	740
AluI	AGCT	1 cut(s)	740
Alw26I	GTCTC	1 cut(s)	560
AlwI	GGATC	3 cut(s)	308, 787, 915
Aor51HI	AGCGCT	1 cut(s)	436
AoxI	GGCC	3 cut(s)	162, 229, 646
ApeKI	GCWGC	2 cut(s)	184, 896
ApoI	RAATTY	2 cut(s)	50, 960
ArsI	GACNNNNNNTTYG	2 cut(s)	405, 437
AspLEI	GCGC	1 cut(s)	437
AspS9I	GGNCC	4 cut(s)	57, 163, 421, 646
AsuHPI	GGTGA	2 cut(s)	400, 742
AsuII	TTCGAA	2 cut(s)	725, 915
AvaII	GGWCC	2 cut(s)	57, 421
BaeGI	GKGCMC	1 cut(s)	792
BaeI	ACNNNNGTAYC	2 cut(s)	238, 271
BbrPI	CACGTG	1 cut(s)	811
BbsI	GAAGAC	2 cut(s)	121, 829
BbvI	GCAGC	2 cut(s)	171, 908
BccI	CCATC	3 cut(s)	146, 637, 657
BceAI	ACGGC	1 cut(s)	935
BciT130I	CCWGG	3 cut(s)	244, 552, 656
BcoDI	GTCTC	1 cut(s)	560
BfmI	CTRYAG	2 cut(s)	793, 902
BfoI	RGCGCY	1 cut(s)	438
BglI	GCCNNNNNGGC	1 cut(s)	796
BisI	GCNGC	2 cut(s)	185, 897
BlsI	GCNGC	2 cut(s)	186, 898
Bme1390I	CCNGG	3 cut(s)	244, 552, 656
Bme18I	GGWCC	2 cut(s)	57, 421
BmgT120I	GGNCC	4 cut(s)	57, 163, 421, 646
BmiI	GGNNCC	3 cut(s)	58, 398, 660
BmrFI	CCNGG	3 cut(s)	244, 552, 656
BmrI	ACTGGG	2 cut(s)	200, 402
BmsI	GCATC	2 cut(s)	549, 808
BmuI	ACTGGG	2 cut(s)	200, 402
BpiI	GAAGAC	2 cut(s)	121, 829
Bpu14I	TTCGAA	2 cut(s)	725, 915
BpuEI	CTTGAG	2 cut(s)	590, 821
Bsa29I	ATCGAT	1 cut(s)	322
BsaAI	YACGTR	1 cut(s)	811
BsaBI	GATNNNNATC	2 cut(s)	238, 318
BsaJI	CCNNGG	4 cut(s)	159, 636, 654, 858
Bsc4I	CCNNNNNNNGG	1 cut(s)	655
Bse1I	ACTGG	4 cut(s)	206, 278, 397, 662
Bse8I	GATNNNNATC	2 cut(s)	238, 318
BseBI	CCWGG	3 cut(s)	244, 552, 656
BseCI	ATCGAT	1 cut(s)	322
BseDI	CCNNGG	4 cut(s)	159, 636, 654, 858
BseGI	GGATG	2 cut(s)	649, 799
BseJI	GATNNNNATC	2 cut(s)	238, 318
BseLI	CCNNNNNNNGG	1 cut(s)	655
BseMII	CTCAG	1 cut(s)	582
BseNI	ACTGG	4 cut(s)	206, 278, 397, 662
BseRI	GAGGAG	1 cut(s)	32
BseSI	GKGCMC	1 cut(s)	792
BseXI	GCAGC	2 cut(s)	171, 908
BseYI	CCCAGC	1 cut(s)	97
BsgI	GTGCAG	1 cut(s)	581
BshFI	GGCC	3 cut(s)	164, 231, 648
BshVI	ATCGAT	1 cut(s)	322
BslFI	GGGAC	1 cut(s)	115
BslI	CCNNNNNNNGG	1 cut(s)	655
BsmAI	GTCTC	1 cut(s)	560
BsmFI	GGGAC	1 cut(s)	115
BsnI	GGCC	3 cut(s)	164, 231, 648
Bsp119I	TTCGAA	2 cut(s)	725, 915
Bsp1286I	GDGCHC	1 cut(s)	792
Bsp143I	GATC	6 cut(s)	233, 313, 323, 779, 907, 946
Bsp19I	CCATGG	2 cut(s)	636, 858
BspACI	CCGC	2 cut(s)	525, 931
BspANI	GGCC	3 cut(s)	164, 231, 648
BspCNI	CTCAG	1 cut(s)	583
BspDI	ATCGAT	1 cut(s)	322
BspLI	GGNNCC	3 cut(s)	58, 398, 660
BspPI	GGATC	3 cut(s)	308, 787, 915
BspT104I	TTCGAA	2 cut(s)	725, 915
BsrI	ACTGG	4 cut(s)	206, 278, 397, 662
BssECI	CCNNGG	4 cut(s)	159, 636, 654, 858
BssMI	GATC	6 cut(s)	233, 313, 323, 779, 907, 946
BssT1I	CCWWGG	3 cut(s)	159, 636, 858
Bst2UI	CCWGG	3 cut(s)	244, 552, 656
Bst4CI	ACNGT	2 cut(s)	76, 884
Bst6I	CTCTTC	2 cut(s)	610, 858
BstAPI	GCANNNNNTGC	2 cut(s)	805, 928
BstBAI	YACGTR	1 cut(s)	811
BstBI	TTCGAA	2 cut(s)	725, 915
BstC8I	GCNNGC	1 cut(s)	261
BstDEI	CTNAG	2 cut(s)	458, 591
BstDSI	CCRYGG	2 cut(s)	636, 858
BstF5I	GGATG	2 cut(s)	649, 799
BstH2I	RGCGCY	1 cut(s)	438
BstHHI	GCGC	1 cut(s)	437
BstKTI	GATC	6 cut(s)	236, 316, 326, 782, 910, 949
BstMAI	GTCTC	1 cut(s)	560
BstMBI	GATC	6 cut(s)	233, 313, 323, 779, 907, 946
BstMWI	GCNNNNNNNGC	5 cut(s)	228, 434, 796, 805, 928
BstNI	CCWGG	3 cut(s)	244, 552, 656
BstNSI	RCATGY	2 cut(s)	263, 308
BstSCI	CCNGG	3 cut(s)	242, 550, 654
BstSFI	CTRYAG	2 cut(s)	793, 902
BstSLI	GKGCMC	1 cut(s)	792
BstV1I	GCAGC	2 cut(s)	171, 908
BstV2I	GAAGAC	2 cut(s)	121, 829
BstX2I	RGATCY	2 cut(s)	779, 907
BstXI	CCANNNNNNTGG	1 cut(s)	643
BstYI	RGATCY	2 cut(s)	779, 907
Bsu15I	ATCGAT	1 cut(s)	322
BsuRI	GGCC	3 cut(s)	164, 231, 648
BsuTUI	ATCGAT	1 cut(s)	322
BtgI	CCRYGG	2 cut(s)	636, 858
BtgZI	GCGATG	1 cut(s)	656
BtsCI	GGATG	2 cut(s)	649, 799
BtsIMutI	CAGTG	2 cut(s)	285, 588
Cac8I	GCNNGC	1 cut(s)	261
CfoI	GCGC	1 cut(s)	437
Cfr13I	GGNCC	4 cut(s)	57, 163, 421, 646
ClaI	ATCGAT	1 cut(s)	322
Csp6I	GTAC	2 cut(s)	247, 878
CspCI	CAANNNNNGTGG	2 cut(s)	792, 827
CviAII	CATG	7 cut(s)	260, 305, 474, 584, 637, 859, 941
CviJI	RGCY	9 cut(s)	83, 97, 164, 231, 494, 635, 648, 706, 740
CviKI_1	RGCY	9 cut(s)	83, 97, 164, 231, 494, 635, 648, 706, 740
CviQI	GTAC	2 cut(s)	247, 878
DdeI	CTNAG	2 cut(s)	458, 591
DpnI	GATC	6 cut(s)	235, 315, 325, 781, 909, 948
DpnII	GATC	6 cut(s)	233, 313, 323, 779, 907, 946
DraIII	CACNNNGTG	2 cut(s)	814, 928
EaeI	YGGCCR	1 cut(s)	229
Eam1104I	CTCTTC	2 cut(s)	610, 858
EarI	CTCTTC	2 cut(s)	610, 858
Eco130I	CCWWGG	3 cut(s)	159, 636, 858
Eco47I	GGWCC	2 cut(s)	57, 421
Eco47III	AGCGCT	1 cut(s)	436
Eco57I	CTGAAG	1 cut(s)	935
Eco72I	CACGTG	1 cut(s)	811
EcoO109I	RGGNCCY	2 cut(s)	163, 421
EcoRII	CCWGG	3 cut(s)	242, 550, 654
EcoT14I	CCWWGG	3 cut(s)	159, 636, 858
ErhI	CCWWGG	3 cut(s)	159, 636, 858
FaeI	CATG	7 cut(s)	263, 308, 477, 587, 640, 862, 944
FaqI	GGGAC	1 cut(s)	115
FatI	CATG	7 cut(s)	259, 304, 473, 583, 636, 858, 940
FauI	CCCGC	1 cut(s)	924
FauNDI	CATATG	2 cut(s)	92, 251
Fnu4HI	GCNGC	2 cut(s)	185, 897
FokI	GGATG	2 cut(s)	636, 786
Fsp4HI	GCNGC	2 cut(s)	185, 897
GlaI	GCGC	1 cut(s)	436
GluI	GCNGC	2 cut(s)	185, 897
GsaI	CCCAGC	1 cut(s)	101
HaeII	RGCGCY	1 cut(s)	438
HaeIII	GGCC	3 cut(s)	164, 231, 648
HhaI	GCGC	1 cut(s)	437
Hin1II	CATG	7 cut(s)	263, 308, 477, 587, 640, 862, 944
Hin6I	GCGC	1 cut(s)	435
HinP1I	GCGC	1 cut(s)	435
HinfI	GANTC	1 cut(s)	283
HphI	GGTGA	2 cut(s)	400, 742
Hpy166II	GTNNAC	2 cut(s)	750, 880
Hpy188I	TCNGA	1 cut(s)	685
Hpy188III	TCNNGA	2 cut(s)	612, 838
Hpy8I	GTNNAC	2 cut(s)	750, 880
HpyAV	CCTTC	2 cut(s)	7, 158
HpyCH4III	ACNGT	2 cut(s)	76, 884
HpyCH4IV	ACGT	2 cut(s)	117, 810
HpyCH4V	TGCA	8 cut(s)	70, 293, 377, 428, 540, 562, 808, 896
HpyF10VI	GCNNNNNNNGC	5 cut(s)	228, 434, 796, 805, 928
HpyF3I	CTNAG	2 cut(s)	458, 591
HpySE526I	ACGT	2 cut(s)	117, 810
Hsp92II	CATG	7 cut(s)	263, 308, 477, 587, 640, 862, 944
HspAI	GCGC	1 cut(s)	435
Kzo9I	GATC	6 cut(s)	233, 313, 323, 779, 907, 946
LmnI	GCTCC	1 cut(s)	580
Lsp1109I	GCAGC	2 cut(s)	171, 908
LweI	GCATC	2 cut(s)	549, 808
MaeII	ACGT	2 cut(s)	117, 810
MaeIII	GTNAC	1 cut(s)	280
MalI	GATC	6 cut(s)	235, 315, 325, 781, 909, 948
MboI	GATC	6 cut(s)	233, 313, 323, 779, 907, 946
MboII	GAAGA	7 cut(s)	121, 124, 627, 754, 834, 875, 941
MfeI	CAATTG	1 cut(s)	363
MflI	RGATCY	2 cut(s)	779, 907
MhlI	GDGCHC	1 cut(s)	792
MluCI	AATT	8 cut(s)	50, 174, 225, 363, 414, 505, 756, 960
MlyI	GAGTC	1 cut(s)	277
MnlI	CCTC	6 cut(s)	10, 176, 289, 414, 611, 859
MseI	TTAA	1 cut(s)	417
MslI	CAYNNNNRTG	5 cut(s)	77, 264, 545, 635, 641
MspA1I	CMGCKG	1 cut(s)	527
MspR9I	CCNGG	3 cut(s)	244, 552, 656
MunI	CAATTG	1 cut(s)	363
MvaI	CCWGG	3 cut(s)	244, 552, 656
MwoI	GCNNNNNNNGC	5 cut(s)	228, 434, 796, 805, 928
NcoI	CCATGG	2 cut(s)	636, 858
NdeI	CATATG	2 cut(s)	92, 251
NdeII	GATC	6 cut(s)	233, 313, 323, 779, 907, 946
NlaIII	CATG	7 cut(s)	263, 308, 477, 587, 640, 862, 944
NlaIV	GGNNCC	3 cut(s)	58, 398, 660
NmuCI	GTSAC	1 cut(s)	280
NspI	RCATGY	2 cut(s)	263, 308
NspV	TTCGAA	2 cut(s)	725, 915
OliI	CACNNNNGTG	1 cut(s)	77
PaeI	GCATGC	1 cut(s)	263
PflMI	CCANNNNNTGG	1 cut(s)	655
PkrI	GCNGC	2 cut(s)	186, 898
PleI	GAGTC	1 cut(s)	277
PmaCI	CACGTG	1 cut(s)	811
PmlI	CACGTG	1 cut(s)	811
PpsI	GAGTC	1 cut(s)	277
Ppu21I	YACGTR	1 cut(s)	811
PpuMI	RGGWCCY	1 cut(s)	421
PsiI	TTATAA	1 cut(s)	693
Psp5II	RGGWCCY	1 cut(s)	421
Psp6I	CCWGG	3 cut(s)	242, 550, 654
PspCI	CACGTG	1 cut(s)	811
PspFI	CCCAGC	1 cut(s)	97
PspGI	CCWGG	3 cut(s)	242, 550, 654
PspN4I	GGNNCC	3 cut(s)	58, 398, 660
PspPI	GGNCC	4 cut(s)	57, 163, 421, 646
PspPPI	RGGWCCY	1 cut(s)	421
PsuI	RGATCY	2 cut(s)	779, 907
RsaI	GTAC	2 cut(s)	248, 879
RsaNI	GTAC	2 cut(s)	247, 878
RseI	CAYNNNNRTG	5 cut(s)	77, 264, 545, 635, 641
SaqAI	TTAA	1 cut(s)	417
SatI	GCNGC	2 cut(s)	185, 897
Sau3AI	GATC	6 cut(s)	233, 313, 323, 779, 907, 946
Sau96I	GGNCC	4 cut(s)	57, 163, 421, 646
SchI	GAGTC	1 cut(s)	277
ScrFI	CCNGG	3 cut(s)	244, 552, 656
SduI	GDGCHC	1 cut(s)	792
SetI	ASST	9 cut(s)	120, 248, 390, 406, 423, 742, 813, 870, 930
SfaNI	GCATC	2 cut(s)	549, 808
SfcI	CTRYAG	2 cut(s)	793, 902
SfuI	TTCGAA	2 cut(s)	725, 915
SinI	GGWCC	2 cut(s)	57, 421
SmiMI	CAYNNNNRTG	5 cut(s)	77, 264, 545, 635, 641
SmlI	CTYRAG	2 cut(s)	605, 836
SmoI	CTYRAG	2 cut(s)	605, 836
SphI	GCATGC	1 cut(s)	263
Sse9I	AATT	8 cut(s)	50, 174, 225, 363, 414, 505, 756, 960
SsiI	CCGC	2 cut(s)	525, 931
SspI	AATATT	1 cut(s)	774
StyD4I	CCNGG	3 cut(s)	242, 550, 654
StyI	CCWWGG	3 cut(s)	159, 636, 858
TaaI	ACNGT	2 cut(s)	76, 884
TaiI	ACGT	2 cut(s)	120, 813
TaqI	TCGA	5 cut(s)	322, 611, 725, 831, 915
TasI	AATT	8 cut(s)	50, 174, 225, 363, 414, 505, 756, 960
TatI	WGTACW	1 cut(s)	877
Tru1I	TTAA	1 cut(s)	417
Tru9I	TTAA	1 cut(s)	417
TscAI	CASTG	2 cut(s)	285, 595
TseFI	GTSAC	1 cut(s)	280
TseI	GCWGC	2 cut(s)	184, 896
Tsp45I	GTSAC	1 cut(s)	280
TspDTI	ATGAA	3 cut(s)	26, 357, 888
TspRI	CASTG	2 cut(s)	285, 595
Van91I	CCANNNNNTGG	1 cut(s)	655
VpaK11BI	GGWCC	2 cut(s)	57, 421
XapI	RAATTY	2 cut(s)	50, 960
XceI	RCATGY	2 cut(s)	263, 308
XcmI	CCANNNNNNNNNTGG	2 cut(s)	524, 762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.