Rw2G008300

Diacylglycerol O-acyltransferase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
8191886 .. 8194473
2588 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G008300.1

Sequence Viewer

Length: 873 bp
ATGGTGGAGATGAAGCAGGAAGAAGAGAAGGAGGGAATGACGATAATCAAAGGAAAAGAAGCTATCGGATTGAGAATCGTGAACATGTTTGTGGCGATGGGTTTGTGGCTTGGAGCTATTCATTTCAACGTGGCTTTGATTCTCTTCACTATTTGCTTCCTTCCTATTTCCAAGGCCATATTGGTATTTGGGTTGCTTGTGTTGTTTATGATAATCCCAGTTGATGATAAGAGCAAAATAGGAAGAAAAGTGGCCAGGTACATATGTAAGTATGCCTGTGGTTATTTTCCAGTGACTTTGTATGTAGAGGAAAAACACGTCTTTGATCCTAGTTGCTCTTATGTCTTTGGGTATGAACCACATTCAGTTTTGCCCATTGGTGTAGTTGCACTGGCTGACATGACTGGGTTCTTGGGTCTCCCTAAGATGAAGGTCCTTGCGAGTACCGCTGTAAGTCTTTTCTTTGTTTGCTCAGATTCTTTGTTCAGTTCATTTAGTCTGGTTTTTCATGGTATCAGAGGTTTTATCACCTTCTGCTGCAGTTGTAAGAGTTTTTTCTCTGCCTTTTGCTTTACTGGTCTAAATTCAAATGTTTATAAGTGGTGGAAGCCAAGTGGGGAGTTATTCCTGAAGTTTGCTAGAGCTATCAGATTCACCCCTGTTGTCTTCTGGGGAATGTTCGGGTCCCCTTTACCCTACAGACATCCAATGCACGTGGTAGTAGGTAAACCAATAGCTCTCAAGCAAAATCCAGAACCCACCATGGAAGAGGTCATTGAAGTACATGGTCAGTATGTTGAAGCACTAAAGGATCTTTTTGAAAAGCACAAGGCACGGGCTGGTTTTCCTGATCTTCAATTGGAAATTCTTTGA

Protein Analysis

290

Amino Acids

32.67

Weight (kDa)

8.65

Isoelectric Point (pI)

34.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DAGAT PF03982 52 - 153 3.6e-16 Diacylglycerol acyltransferase
DAGAT PF03982 186 - 288 8.2e-24 Diacylglycerol acyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 597
AciI CCGC 1 cut(s) 447
AclWI GGATC 2 cut(s) 320, 819
AcoI YGGCCR 1 cut(s) 252
AcsI RAATTY 2 cut(s) 583, 864
AcuI CTGAAG 1 cut(s) 650
AcvI CACGTG 1 cut(s) 715
AfaI GTAC 3 cut(s) 260, 445, 783
AflIII ACRYGT 2 cut(s) 84, 316
AgsI TTSAA 6 cut(s) 127, 588, 779, 800, 821, 857
AjiI CACGTC 1 cut(s) 319
AjnI CCWGG 1 cut(s) 254
AluBI AGCT 4 cut(s) 62, 116, 644, 737
AluI AGCT 4 cut(s) 62, 116, 644, 737
Alw26I GTCTC 1 cut(s) 422
AlwI GGATC 2 cut(s) 320, 819
AoxI GGCC 2 cut(s) 174, 252
ApeKI GCWGC 1 cut(s) 537
ApoI RAATTY 2 cut(s) 583, 864
AspS9I GGNCC 2 cut(s) 433, 684
AsuHPI GGTGA 2 cut(s) 520, 646
AvaII GGWCC 2 cut(s) 433, 684
BaeI ACNNNNGTAYC 2 cut(s) 250, 283
BalI TGGCCA 1 cut(s) 254
BbrPI CACGTG 1 cut(s) 715
BbsI GAAGAC 1 cut(s) 658
BbvI GCAGC 1 cut(s) 524
BccI CCATC 1 cut(s) 91
BciT130I CCWGG 1 cut(s) 256
BcoDI GTCTC 1 cut(s) 422
BfaI CTAG 2 cut(s) 330, 639
BfmI CTRYAG 2 cut(s) 538, 697
BisI GCNGC 1 cut(s) 538
BlsI GCNGC 1 cut(s) 539
Bme1390I CCNGG 1 cut(s) 256
Bme18I GGWCC 2 cut(s) 433, 684
BmgBI CACGTC 1 cut(s) 319
BmgT120I GGNCC 2 cut(s) 433, 684
BmiI GGNNCC 2 cut(s) 685, 686
BmrFI CCNGG 1 cut(s) 256
BmrI ACTGGG 2 cut(s) 212, 414
BmuI ACTGGG 2 cut(s) 212, 414
BpiI GAAGAC 1 cut(s) 658
BpuEI CTTGAG 1 cut(s) 725
BsaAI YACGTR 1 cut(s) 715
BsaI GGTCTC 1 cut(s) 422
BsaJI CCNNGG 2 cut(s) 171, 762
Bse1I ACTGG 5 cut(s) 218, 290, 396, 409, 580
BseBI CCWGG 1 cut(s) 256
BseDI CCNNGG 2 cut(s) 171, 762
BseGI GGATG 1 cut(s) 703
BseMII CTCAG 1 cut(s) 486
BseNI ACTGG 5 cut(s) 218, 290, 396, 409, 580
BseXI GCAGC 1 cut(s) 524
BshFI GGCC 2 cut(s) 176, 254
BslFI GGGAC 1 cut(s) 670
BsmAI GTCTC 1 cut(s) 422
BsmFI GGGAC 1 cut(s) 670
BsnI GGCC 2 cut(s) 176, 254
Bso31I GGTCTC 1 cut(s) 422
Bsp143I GATC 3 cut(s) 325, 811, 850
Bsp19I CCATGG 1 cut(s) 762
BspACI CCGC 1 cut(s) 447
BspANI GGCC 2 cut(s) 176, 254
BspCNI CTCAG 1 cut(s) 485
BspLI GGNNCC 2 cut(s) 685, 686
BspMAI CTGCAG 1 cut(s) 542
BspPI GGATC 2 cut(s) 320, 819
BspTNI GGTCTC 1 cut(s) 422
BsrI ACTGG 5 cut(s) 218, 290, 396, 409, 580
BssECI CCNNGG 2 cut(s) 171, 762
BssMI GATC 3 cut(s) 325, 811, 850
BssT1I CCWWGG 2 cut(s) 171, 762
Bst2UI CCWGG 1 cut(s) 256
Bst6I CTCTTC 3 cut(s) 18, 149, 762
BstBAI YACGTR 1 cut(s) 715
BstDEI CTNAG 2 cut(s) 423, 472
BstDSI CCRYGG 1 cut(s) 762
BstF5I GGATG 1 cut(s) 703
BstKTI GATC 3 cut(s) 328, 814, 853
BstMAI GTCTC 1 cut(s) 422
BstMBI GATC 3 cut(s) 325, 811, 850
BstMWI GCNNNNNNNGC 1 cut(s) 446
BstNI CCWGG 1 cut(s) 256
BstNSI RCATGY 1 cut(s) 88
BstSCI CCNGG 1 cut(s) 254
BstSFI CTRYAG 2 cut(s) 538, 697
BstV1I GCAGC 1 cut(s) 524
BstV2I GAAGAC 1 cut(s) 658
BstX2I RGATCY 1 cut(s) 811
BstYI RGATCY 1 cut(s) 811
BsuRI GGCC 2 cut(s) 176, 254
BtgI CCRYGG 1 cut(s) 762
BtgZI GCGATG 1 cut(s) 110
BtrI CACGTC 1 cut(s) 319
BtsCI GGATG 1 cut(s) 703
BtsIMutI CAGTG 2 cut(s) 297, 389
Cfr13I GGNCC 2 cut(s) 433, 684
Csp6I GTAC 3 cut(s) 259, 444, 782
CspCI CAANNNNNGTGG 2 cut(s) 696, 731
CviAII CATG 5 cut(s) 85, 400, 509, 763, 785
CviQI GTAC 3 cut(s) 259, 444, 782
DdeI CTNAG 2 cut(s) 423, 472
DpnI GATC 3 cut(s) 327, 813, 852
DpnII GATC 3 cut(s) 325, 811, 850
EaeI YGGCCR 1 cut(s) 252
Eam1104I CTCTTC 3 cut(s) 18, 149, 762
EarI CTCTTC 3 cut(s) 18, 149, 762
Eco130I CCWWGG 2 cut(s) 171, 762
Eco31I GGTCTC 1 cut(s) 422
Eco47I GGWCC 2 cut(s) 433, 684
Eco57I CTGAAG 1 cut(s) 650
Eco72I CACGTG 1 cut(s) 715
EcoO109I RGGNCCY 2 cut(s) 433, 684
EcoRII CCWGG 1 cut(s) 254
EcoT14I CCWWGG 2 cut(s) 171, 762
ErhI CCWWGG 2 cut(s) 171, 762
FaeI CATG 5 cut(s) 88, 403, 512, 766, 788
FaqI GGGAC 1 cut(s) 670
FatI CATG 5 cut(s) 84, 399, 508, 762, 784
FauNDI CATATG 1 cut(s) 263
Fnu4HI GCNGC 1 cut(s) 538
FokI GGATG 1 cut(s) 690
Fsp4HI GCNGC 1 cut(s) 538
FspBI CTAG 2 cut(s) 330, 639
GluI GCNGC 1 cut(s) 538
HaeIII GGCC 2 cut(s) 176, 254
Hin1II CATG 5 cut(s) 88, 403, 512, 766, 788
HinfI GANTC 4 cut(s) 75, 139, 476, 651
HphI GGTGA 2 cut(s) 520, 646
Hpy166II GTNNAC 2 cut(s) 82, 728
Hpy188I TCNGA 4 cut(s) 68, 475, 518, 650
Hpy188III TCNNGA 4 cut(s) 79, 628, 752, 848
Hpy8I GTNNAC 2 cut(s) 82, 728
HpyAV CCTTC 4 cut(s) 22, 170, 424, 541
HpyCH4IV ACGT 3 cut(s) 129, 318, 714
HpyCH4V TGCA 3 cut(s) 389, 540, 712
HpyF10VI GCNNNNNNNGC 1 cut(s) 446
HpyF3I CTNAG 2 cut(s) 423, 472
HpySE526I ACGT 3 cut(s) 129, 318, 714
Hsp92II CATG 5 cut(s) 88, 403, 512, 766, 788
KflI GGGWCCC 1 cut(s) 684
Kzo9I GATC 3 cut(s) 325, 811, 850
LmnI GCTCC 1 cut(s) 113
Lsp1109I GCAGC 1 cut(s) 524
MaeI CTAG 2 cut(s) 330, 639
MaeII ACGT 3 cut(s) 129, 318, 714
MaeIII GTNAC 1 cut(s) 292
MalI GATC 3 cut(s) 327, 813, 852
MboI GATC 3 cut(s) 325, 811, 850
MboII GAAGA 7 cut(s) 32, 35, 136, 255, 658, 779, 845
MfeI CAATTG 1 cut(s) 857
MflI RGATCY 1 cut(s) 811
MlsI TGGCCA 1 cut(s) 254
MluCI AATT 3 cut(s) 583, 857, 864
MluNI TGGCCA 1 cut(s) 254
MnlI CCTC 4 cut(s) 25, 301, 512, 763
Mox20I TGGCCA 1 cut(s) 254
MscI TGGCCA 1 cut(s) 254
MslI CAYNNNNRTG 1 cut(s) 89
Msp20I TGGCCA 1 cut(s) 254
MspA1I CMGCKG 1 cut(s) 449
MspR9I CCNGG 1 cut(s) 256
MunI CAATTG 1 cut(s) 857
MvaI CCWGG 1 cut(s) 256
MwoI GCNNNNNNNGC 1 cut(s) 446
NcoI CCATGG 1 cut(s) 762
NdeI CATATG 1 cut(s) 263
NdeII GATC 3 cut(s) 325, 811, 850
NlaIII CATG 5 cut(s) 88, 403, 512, 766, 788
NlaIV GGNNCC 2 cut(s) 685, 686
NmuCI GTSAC 1 cut(s) 292
NspI RCATGY 1 cut(s) 88
PciI ACATGT 1 cut(s) 84
PfeI GAWTC 4 cut(s) 75, 139, 476, 651
PkrI GCNGC 1 cut(s) 539
PmaCI CACGTG 1 cut(s) 715
PmlI CACGTG 1 cut(s) 715
Ppu21I YACGTR 1 cut(s) 715
PpuMI RGGWCCY 2 cut(s) 433, 684
PscI ACATGT 1 cut(s) 84
PsiI TTATAA 1 cut(s) 597
Psp5II RGGWCCY 2 cut(s) 433, 684
Psp6I CCWGG 1 cut(s) 254
PspCI CACGTG 1 cut(s) 715
PspGI CCWGG 1 cut(s) 254
PspN4I GGNNCC 2 cut(s) 685, 686
PspPI GGNCC 2 cut(s) 433, 684
PspPPI RGGWCCY 2 cut(s) 433, 684
PstI CTGCAG 1 cut(s) 542
PsuI RGATCY 1 cut(s) 811
RsaI GTAC 3 cut(s) 260, 445, 783
RsaNI GTAC 3 cut(s) 259, 444, 782
RseI CAYNNNNRTG 1 cut(s) 89
SatI GCNGC 1 cut(s) 538
Sau3AI GATC 3 cut(s) 325, 811, 850
Sau96I GGNCC 2 cut(s) 433, 684
ScrFI CCNGG 1 cut(s) 256
SfcI CTRYAG 2 cut(s) 538, 697
SinI GGWCC 2 cut(s) 433, 684
SmiMI CAYNNNNRTG 1 cut(s) 89
SmlI CTYRAG 1 cut(s) 740
SmoI CTYRAG 1 cut(s) 740
Sse9I AATT 3 cut(s) 583, 857, 864
SsiI CCGC 1 cut(s) 447
SspMI CTAG 2 cut(s) 330, 639
StyD4I CCNGG 1 cut(s) 254
StyI CCWWGG 2 cut(s) 171, 762
TaiI ACGT 3 cut(s) 132, 321, 717
TasI AATT 3 cut(s) 583, 857, 864
TatI WGTACW 1 cut(s) 781
TfiI GAWTC 4 cut(s) 75, 139, 476, 651
TscAI CASTG 2 cut(s) 297, 396
TseFI GTSAC 1 cut(s) 292
TseI GCWGC 1 cut(s) 537
Tsp45I GTSAC 1 cut(s) 292
TspDTI ATGAA 6 cut(s) 26, 110, 369, 443, 480, 497
TspRI CASTG 2 cut(s) 297, 396
VpaK11BI GGWCC 2 cut(s) 433, 684
XapI RAATTY 2 cut(s) 583, 864
XceI RCATGY 1 cut(s) 88
XcmI CCANNNNNNNNNTGG 1 cut(s) 178
XspI CTAG 2 cut(s) 330, 639
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.