Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0006124

Physical Location & Seq

Genomic Coordinates Forward (+)

18459271 .. 18462848

Gene Structure 3578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1227200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 978 bp

ATGATGGAGATGAAGGAGGAAGAATCTCAGAAAATGGCGGTTTTCAAAGGCAGAGAAATATTCGGGTCAAATTTTTTGCACATGGTTCTGGCTCTGGGTATTTGGCTGGGTACAATCCATTTCAACGCGGCTCTGGTTCTCTTCACAATCTTCTTCCTTCCATTTTCCAAGGCCCTTCTTGTACTTGGGTTGCTTGTATTGTTTATGATCATCCCAGTTGATGATAAGAGCAAACTAGGAAGATCACTTTCCAGGTACATATGTAAGCATGCCTGTGCTTATTTTCCCGTGACTCTGTACGCAGAGGACATCAATGCCTTTGATCCTAATCGCTCTTATGTCTTTGGTTATGAACCACATTCGGTTTTGCCAATTGGTGTTGTTGCACTTGCTGACCTTACTGGGTTCTTGCCTCTCCCCAAAATTAAGGTCCTTGCGAGTAGCGCGGTGTTCTACACACCATTCCTGAGACATATATGGACATGGCTGGGTCTTACACCGGCCACAAGGAGTAATTTTATCTCCCACTTATCTGCTGGTTATAGTTGTATCATTGTGCCTGGTGGAGTGCAGGAGACATTTTATATGGAGCATGGCACTGAGATAGCATTCCTCAAGTCGAGAAGAGGATTTGTTCGAATAGCCATGGAGCTGGGTAATCCCCTGGTTCCAGTTTTCTGCTTTGGTCAGTCAAATGTTTACAAGTGGTGGAAACCAAGTGGGGAATTGATTTTGAAGTTTGCTAGAGTTATCAAGTTCACCCCAGTTTTCTTCTGGGGATTATTTGGAAGTCCTGTACCGTACAGTCATCCAATGCACGTGGTGGTCGGAAAACCAATTGATGTCAAGAAGACTCCACAACCCAGCATGGAAGAGGTGAATGAAGTGCACGGTCAGTTTGTCGCAGCACTGCAGGATCTTTTCGAACGGCACAAGGCACGGGTTGGACACGCTGATCTCCAATTGAAAATTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004144 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0005811 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0006996 GO:0008150 GO:0008152 GO:0008374 GO:0008610 GO:0009058 GO:0009987 GO:0012505 GO:0016020 GO:0016043 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0019432 GO:0031984 GO:0034389 GO:0042175 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0071704 GO:0071840 GO:0098827 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 ko04975 map00561 map04975

Pfam Domains

Protein Families

DAGAT

Protein Analysis

326

Amino Acids

36.66

Weight (kDa)

9.16

Isoelectric Point (pI)

45.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DAGAT	PF03982	50 - 322	7.6e-80	Diacylglycerol acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51520
fragaria_vesca	FvH4_1g09760 FvH4_1g09760
malus_domestica	MD02G1107700.v1.1 MD02G1107800.v1.1 MD15G1227200.v1.1
prunus_persica	Prupe.7G188100_v2.0.a1 Prupe.7G188100_v2.0.a1 Prupe.7G188100_v2.0.a1
pyrus_communis	pycom02g08660 pycom15g20210
rosa_chinensis	RchiOBHm_Chr2g0096691
rosa_laevigata	RLG00000016662 RLG00000036260
rosa_multiflora	Rmu_sc0003565.1_g000021
rosa_roxburghii	Rroxscaffold_2G00145410 Rroxscaffold_6G00397690
rosa_rugosa	Rorug02G0059600 Rorug02G0059700 Rorug04G0089100
rosa_samantha	Rh2AG107100 Rh2BG109500 Rh2CG111300 Rh2DG110900 Rh5BG533300 Rh6AG230400
rosa_wichuraiana	Rw2G008300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	128, 446
AciI	CCGC	3 cut(s)	38, 128, 446
AclWI	GGATC	2 cut(s)	317, 924
AcoI	YGGCCR	1 cut(s)	501
AcsI	RAATTY	2 cut(s)	70, 969
AcvI	CACGTG	1 cut(s)	820
AdeI	CACNNNGTG	1 cut(s)	823
AfaI	GTAC	6 cut(s)	112, 183, 257, 299, 798, 803
AgsI	TTSAA	4 cut(s)	46, 124, 736, 967
AjnI	CCWGG	3 cut(s)	251, 559, 663
AjuI	GAANNNNNNNTTGG	1 cut(s)	954
AluBI	AGCT	1 cut(s)	652
AluI	AGCT	1 cut(s)	652
Alw21I	GWGCWC	1 cut(s)	891
Alw26I	GTCTC	2 cut(s)	463, 569
Alw44I	GTGCAC	1 cut(s)	887
AlwI	GGATC	2 cut(s)	317, 924
AoxI	GGCC	2 cut(s)	171, 501
ApaLI	GTGCAC	1 cut(s)	887
ApeKI	GCWGC	1 cut(s)	905
ApoI	RAATTY	2 cut(s)	70, 969
ArsI	GACNNNNNNTTYG	2 cut(s)	414, 446
AspLEI	GCGC	1 cut(s)	446
AspS9I	GGNCC	2 cut(s)	172, 430
AsuHPI	GGTGA	2 cut(s)	751, 889
AsuII	TTCGAA	2 cut(s)	637, 924
AvaII	GGWCC	1 cut(s)	430
BaeGI	GKGCMC	1 cut(s)	891
BaeI	ACNNNNGTAYC	2 cut(s)	247, 280
BbrPI	CACGTG	1 cut(s)	820
BbsI	GAAGAC	1 cut(s)	857
Bbv12I	GWGCWC	1 cut(s)	891
BbvI	GCAGC	1 cut(s)	917
BceAI	ACGGC	1 cut(s)	944
BciT130I	CCWGG	3 cut(s)	253, 561, 665
BclI	TGATCA	1 cut(s)	207
BcoDI	GTCTC	2 cut(s)	463, 569
BfaI	CTAG	2 cut(s)	236, 744
BfmI	CTRYAG	1 cut(s)	911
BisI	GCNGC	2 cut(s)	129, 906
BlsI	GCNGC	2 cut(s)	130, 907
Bme1390I	CCNGG	3 cut(s)	253, 561, 665
Bme18I	GGWCC	1 cut(s)	430
BmgT120I	GGNCC	2 cut(s)	172, 430
BmiI	GGNNCC	1 cut(s)	669
BmrFI	CCNGG	3 cut(s)	253, 561, 665
BmrI	ACTGGG	3 cut(s)	209, 411, 758
BmuI	ACTGGG	3 cut(s)	209, 411, 758
BpiI	GAAGAC	1 cut(s)	857
Bpu14I	TTCGAA	2 cut(s)	637, 924
BpuEI	CTTGAG	1 cut(s)	599
BsaAI	YACGTR	1 cut(s)	820
BsaBI	GATNNNNATC	1 cut(s)	327
BsaJI	CCNNGG	3 cut(s)	168, 645, 663
Bse118I	RCCGGY	1 cut(s)	499
Bse1I	ACTGG	4 cut(s)	215, 406, 671, 764
Bse8I	GATNNNNATC	1 cut(s)	327
BseBI	CCWGG	3 cut(s)	253, 561, 665
BseDI	CCNNGG	3 cut(s)	168, 645, 663
BseGI	GGATG	2 cut(s)	210, 808
BseJI	GATNNNNATC	1 cut(s)	327
BseMII	CTCAG	3 cut(s)	41, 458, 591
BseNI	ACTGG	4 cut(s)	215, 406, 671, 764
BseSI	GKGCMC	1 cut(s)	891
BseXI	GCAGC	1 cut(s)	917
BseYI	CCCAGC	4 cut(s)	106, 487, 652, 863
BsgI	GTGCAG	1 cut(s)	590
Bsh1236I	CGCG	2 cut(s)	128, 446
BshFI	GGCC	2 cut(s)	173, 503
BsiHKAI	GWGCWC	1 cut(s)	891
BsiSI	CCGG	1 cut(s)	500
BsmAI	GTCTC	2 cut(s)	463, 569
BsmI	GAATGC	1 cut(s)	608
BsnI	GGCC	2 cut(s)	173, 503
Bsp119I	TTCGAA	2 cut(s)	637, 924
Bsp1286I	GDGCHC	1 cut(s)	891
Bsp143I	GATC	5 cut(s)	207, 242, 322, 916, 955
Bsp19I	CCATGG	1 cut(s)	645
BspACI	CCGC	3 cut(s)	38, 128, 446
BspANI	GGCC	2 cut(s)	173, 503
BspCNI	CTCAG	3 cut(s)	40, 459, 592
BspFNI	CGCG	2 cut(s)	128, 446
BspLI	GGNNCC	1 cut(s)	669
BspMAI	CTGCAG	1 cut(s)	915
BspPI	GGATC	2 cut(s)	317, 924
BspT104I	TTCGAA	2 cut(s)	637, 924
BsrFI	RCCGGY	1 cut(s)	499
BsrI	ACTGG	4 cut(s)	215, 406, 671, 764
BssAI	RCCGGY	1 cut(s)	499
BssECI	CCNNGG	3 cut(s)	168, 645, 663
BssMI	GATC	5 cut(s)	207, 242, 322, 916, 955
BssT1I	CCWWGG	2 cut(s)	168, 645
Bst2UI	CCWGG	3 cut(s)	253, 561, 665
Bst4CI	ACNGT	3 cut(s)	801, 806, 893
Bst6I	CTCTTC	3 cut(s)	146, 619, 867
BstBAI	YACGTR	1 cut(s)	820
BstBI	TTCGAA	2 cut(s)	637, 924
BstC8I	GCNNGC	1 cut(s)	270
BstDEI	CTNAG	3 cut(s)	27, 467, 600
BstDSI	CCRYGG	1 cut(s)	645
BstF5I	GGATG	2 cut(s)	210, 808
BstFNI	CGCG	2 cut(s)	128, 446
BstHHI	GCGC	1 cut(s)	446
BstKTI	GATC	5 cut(s)	210, 245, 325, 919, 958
BstMAI	GTCTC	2 cut(s)	463, 569
BstMBI	GATC	5 cut(s)	207, 242, 322, 916, 955
BstMWI	GCNNNNNNNGC	1 cut(s)	443
BstNI	CCWGG	3 cut(s)	253, 561, 665
BstNSI	RCATGY	1 cut(s)	272
BstSCI	CCNGG	3 cut(s)	251, 559, 663
BstSFI	CTRYAG	1 cut(s)	911
BstSLI	GKGCMC	1 cut(s)	891
BstUI	CGCG	2 cut(s)	128, 446
BstV1I	GCAGC	1 cut(s)	917
BstV2I	GAAGAC	1 cut(s)	857
BstX2I	RGATCY	1 cut(s)	916
BstXI	CCANNNNNNTGG	1 cut(s)	652
BstYI	RGATCY	1 cut(s)	916
BsuRI	GGCC	2 cut(s)	173, 503
BtgI	CCRYGG	1 cut(s)	645
BtsCI	GGATG	2 cut(s)	210, 808
BtsI	GCAGTG	1 cut(s)	908
BtsIMutI	CAGTG	2 cut(s)	597, 908
Cac8I	GCNNGC	1 cut(s)	270
CfoI	GCGC	1 cut(s)	446
Cfr10I	RCCGGY	1 cut(s)	499
Cfr13I	GGNCC	2 cut(s)	172, 430
Csp6I	GTAC	6 cut(s)	111, 182, 256, 298, 797, 802
CspCI	CAANNNNNGTGG	2 cut(s)	801, 836
CviAII	CATG	6 cut(s)	82, 269, 483, 593, 646, 868
CviJI	RGCY	8 cut(s)	92, 106, 131, 173, 487, 503, 644, 652
CviKI_1	RGCY	8 cut(s)	92, 106, 131, 173, 487, 503, 644, 652
CviQI	GTAC	6 cut(s)	111, 182, 256, 298, 797, 802
DdeI	CTNAG	3 cut(s)	27, 467, 600
DpnI	GATC	5 cut(s)	209, 244, 324, 918, 957
DpnII	GATC	5 cut(s)	207, 242, 322, 916, 955
DraIII	CACNNNGTG	1 cut(s)	823
EaeI	YGGCCR	1 cut(s)	501
Eam1104I	CTCTTC	3 cut(s)	146, 619, 867
EarI	CTCTTC	3 cut(s)	146, 619, 867
Eco130I	CCWWGG	2 cut(s)	168, 645
Eco47I	GGWCC	1 cut(s)	430
Eco72I	CACGTG	1 cut(s)	820
EcoO109I	RGGNCCY	2 cut(s)	172, 430
EcoRII	CCWGG	3 cut(s)	251, 559, 663
EcoT14I	CCWWGG	2 cut(s)	168, 645
ErhI	CCWWGG	2 cut(s)	168, 645
FaeI	CATG	6 cut(s)	85, 272, 486, 596, 649, 871
FatI	CATG	6 cut(s)	81, 268, 482, 592, 645, 867
FauNDI	CATATG	1 cut(s)	260
FbaI	TGATCA	1 cut(s)	207
Fnu4HI	GCNGC	2 cut(s)	129, 906
FokI	GGATG	2 cut(s)	197, 795
Fsp4HI	GCNGC	2 cut(s)	129, 906
FspBI	CTAG	2 cut(s)	236, 744
GlaI	GCGC	1 cut(s)	445
GluI	GCNGC	2 cut(s)	129, 906
GsaI	CCCAGC	4 cut(s)	110, 491, 656, 867
HaeIII	GGCC	2 cut(s)	173, 503
HapII	CCGG	1 cut(s)	500
HhaI	GCGC	1 cut(s)	446
Hin1II	CATG	6 cut(s)	85, 272, 486, 596, 649, 871
Hin6I	GCGC	1 cut(s)	444
HinP1I	GCGC	1 cut(s)	444
HinfI	GANTC	3 cut(s)	23, 292, 853
HpaII	CCGG	1 cut(s)	500
HphI	GGTGA	2 cut(s)	751, 889
Hpy166II	GTNNAC	3 cut(s)	700, 759, 889
Hpy188I	TCNGA	2 cut(s)	30, 830
Hpy188III	TCNNGA	3 cut(s)	466, 621, 847
Hpy8I	GTNNAC	3 cut(s)	700, 759, 889
HpyAV	CCTTC	3 cut(s)	7, 167, 185
HpyCH4III	ACNGT	3 cut(s)	801, 806, 893
HpyCH4IV	ACGT	1 cut(s)	819
HpyCH4V	TGCA	6 cut(s)	79, 386, 571, 817, 889, 913
HpyF10VI	GCNNNNNNNGC	1 cut(s)	443
HpyF3I	CTNAG	3 cut(s)	27, 467, 600
HpySE526I	ACGT	1 cut(s)	819
Hsp92II	CATG	6 cut(s)	85, 272, 486, 596, 649, 871
HspAI	GCGC	1 cut(s)	444
Ksp22I	TGATCA	1 cut(s)	207
Kzo9I	GATC	5 cut(s)	207, 242, 322, 916, 955
LmnI	GCTCC	2 cut(s)	589, 649
Lsp1109I	GCAGC	1 cut(s)	917
MaeI	CTAG	2 cut(s)	236, 744
MaeII	ACGT	1 cut(s)	819
MaeIII	GTNAC	1 cut(s)	289
MalI	GATC	5 cut(s)	209, 244, 324, 918, 957
MboI	GATC	5 cut(s)	207, 242, 322, 916, 955
MboII	GAAGA	9 cut(s)	32, 133, 142, 145, 252, 636, 763, 862, 884
MfeI	CAATTG	3 cut(s)	372, 837, 962
MflI	RGATCY	1 cut(s)	916
MhlI	GDGCHC	1 cut(s)	891
MluCI	AATT	8 cut(s)	70, 372, 423, 514, 725, 837, 962, 969
MlyI	GAGTC	2 cut(s)	286, 847
MmeI	TCCRAC	2 cut(s)	808, 925
MnlI	CCTC	6 cut(s)	10, 298, 423, 620, 623, 868
MseI	TTAA	1 cut(s)	426
MslI	CAYNNNNRTG	1 cut(s)	273
MspI	CCGG	1 cut(s)	500
MspR9I	CCNGG	3 cut(s)	253, 561, 665
MunI	CAATTG	3 cut(s)	372, 837, 962
Mva1269I	GAATGC	1 cut(s)	608
MvaI	CCWGG	3 cut(s)	253, 561, 665
MvnI	CGCG	2 cut(s)	128, 446
MwoI	GCNNNNNNNGC	1 cut(s)	443
NcoI	CCATGG	1 cut(s)	645
NdeI	CATATG	1 cut(s)	260
NdeII	GATC	5 cut(s)	207, 242, 322, 916, 955
NlaIII	CATG	6 cut(s)	85, 272, 486, 596, 649, 871
NlaIV	GGNNCC	1 cut(s)	669
NmuCI	GTSAC	1 cut(s)	289
NspI	RCATGY	1 cut(s)	272
NspV	TTCGAA	2 cut(s)	637, 924
PaeI	GCATGC	1 cut(s)	272
PctI	GAATGC	1 cut(s)	608
PfeI	GAWTC	1 cut(s)	23
PkrI	GCNGC	2 cut(s)	130, 907
PleI	GAGTC	2 cut(s)	286, 847
PmaCI	CACGTG	1 cut(s)	820
PmlI	CACGTG	1 cut(s)	820
PpsI	GAGTC	2 cut(s)	286, 847
Ppu21I	YACGTR	1 cut(s)	820
PpuMI	RGGWCCY	1 cut(s)	430
Psp5II	RGGWCCY	1 cut(s)	430
Psp6I	CCWGG	3 cut(s)	251, 559, 663
PspCI	CACGTG	1 cut(s)	820
PspFI	CCCAGC	4 cut(s)	106, 487, 652, 863
PspGI	CCWGG	3 cut(s)	251, 559, 663
PspN4I	GGNNCC	1 cut(s)	669
PspPI	GGNCC	2 cut(s)	172, 430
PspPPI	RGGWCCY	1 cut(s)	430
PstI	CTGCAG	1 cut(s)	915
PsuI	RGATCY	1 cut(s)	916
RsaI	GTAC	6 cut(s)	112, 183, 257, 299, 798, 803
RsaNI	GTAC	6 cut(s)	111, 182, 256, 298, 797, 802
RseI	CAYNNNNRTG	1 cut(s)	273
SaqAI	TTAA	1 cut(s)	426
SatI	GCNGC	2 cut(s)	129, 906
Sau3AI	GATC	5 cut(s)	207, 242, 322, 916, 955
Sau96I	GGNCC	2 cut(s)	172, 430
SchI	GAGTC	2 cut(s)	286, 847
ScrFI	CCNGG	3 cut(s)	253, 561, 665
SduI	GDGCHC	1 cut(s)	891
SetI	ASST	6 cut(s)	257, 399, 432, 654, 822, 879
SfcI	CTRYAG	1 cut(s)	911
SfuI	TTCGAA	2 cut(s)	637, 924
SinI	GGWCC	1 cut(s)	430
SmiMI	CAYNNNNRTG	1 cut(s)	273
SmlI	CTYRAG	1 cut(s)	614
SmoI	CTYRAG	1 cut(s)	614
SphI	GCATGC	1 cut(s)	272
Sse9I	AATT	8 cut(s)	70, 372, 423, 514, 725, 837, 962, 969
SsiI	CCGC	3 cut(s)	38, 128, 446
SspI	AATATT	1 cut(s)	60
SspMI	CTAG	2 cut(s)	236, 744
StyD4I	CCNGG	3 cut(s)	251, 559, 663
StyI	CCWWGG	2 cut(s)	168, 645
TaaI	ACNGT	3 cut(s)	801, 806, 893
TaiI	ACGT	1 cut(s)	822
TaqI	TCGA	3 cut(s)	620, 637, 924
TasI	AATT	8 cut(s)	70, 372, 423, 514, 725, 837, 962, 969
TatI	WGTACW	1 cut(s)	181
TauI	GCSGC	1 cut(s)	131
TfiI	GAWTC	1 cut(s)	23
Tru1I	TTAA	1 cut(s)	426
Tru9I	TTAA	1 cut(s)	426
TscAI	CASTG	2 cut(s)	604, 915
TseFI	GTSAC	1 cut(s)	289
TseI	GCWGC	1 cut(s)	905
Tsp45I	GTSAC	1 cut(s)	289
TspDTI	ATGAA	3 cut(s)	26, 366, 897
TspRI	CASTG	2 cut(s)	604, 915
VneI	GTGCAC	1 cut(s)	887
VpaK11BI	GGWCC	1 cut(s)	430
XapI	RAATTY	2 cut(s)	70, 969
XceI	RCATGY	1 cut(s)	272
XcmI	CCANNNNNNNNNTGG	2 cut(s)	533, 771
XspI	CTAG	2 cut(s)	236, 744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.