Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0008424

Physical Location & Seq

Genomic Coordinates Reverse (-)

11930044 .. 11932176

Gene Structure 2133 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1143600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGATTTTATCAATTAGACCTCATATTCGACGAATATTTACAGCTTCAGCCTTTGCCCATACGGAATGCAGAAACCCTCTTCTTCCAGAGAAAAAACCAGACCATCTAGAGCAGAAAGCCCAATTGGGTAATGACGTAGATATGATTGAACTCAACGCTCAGTTGAAGCAGCTGGTTAAAGCAGGTAAAGTTGGAGACGCCCGGAACATGTTCGATAAAATGCCTCAGAGAGATGAGATTTCGTGGACCAGTATGATTTCAGGCTACGTTGGTGTCTCTGATGCCTCTGAGGCATTGGTTTTGTTTTCGCACATGTGGGTTCAGCCTGGAATTTGCATGGACCCCTTTGTTCTTAGTGTTGTACTAAAGGCTTGTGGACTTGGTTTGAACTTGTCTTATGGGGAAGTAATACATGGGTACTCGATAAAATCGTGTTTTGTCAATTCGGTCTTCGTGGGCAGTGCGCTTCTCGACATGTATATGAAGATTGGTAAGATTGAGCAGGGATGTAGGGTTTTTGATGAAATGCCGATAAGAAATGTGGTGTCTTGGACTACTGTTATAACCGGGCTTGTTCGTGCCGGTTACAATGCAGAGGGGTTGGAGTATTTTTCTGAAATGTGGAGGTCGAAGGTGCAGTATGACGCGTATGTGTTTGCTATCTCGTTGAAGGCGTGTGCTGATTTGAGGGCTTTGAAATATGGGAGAGCGATTCACACGCAAACAATGAAGAAGGGGTTCGATGAGAGCTCATTTGTGACGAACTCTCTTGCCACCATGTACAACAAATGTGGCAAATTAGACTACGGGTTGCAGTTGTTTGAAAAAATGAGGATACAGGATGTTGTTTCATGGACATCAATCATTACAACATACCTCTGGACGGGTCAAGAGGACCGTGCAATCAAAGTGTTTATAAGAATGCAAGAAGCCGGTGTGAGTCCTAATGAATACACTTTTGCAGGCGTTATCTCTGGAGTTGCCAGTCTTGCTAGAGTTGAATGGGGTGAACAATTGCATGCCCACGTTTTACACAGGGGTTTTATCTCTTCGTTGTCGGTGGGAAATTCCGTTGTGACCATGTATGCCAAATGTGGGCGTTTGGCTTCAGGTTCTAAGGTGTTTCATGAGATGAGCAGAAAAGATATTGTTTCATGGAGCGCTGTAATTGTTGGGTATTCTCAAGGAGGTTATGGGGAAGAAGCTTTTCAGTATTTGTCATGGATGAGAAGGGATGGACCAAAACCAAATGAGTTTGCTCTTGCTAGTGTATTGAGTGTTTGTGGAAGTATGGCAATGCTTGAGCAAGGGAAGCAACTGCACGCTCATGTTGTGTCTGTCGGTTTAGAGTTTTCATCTATGGTACAAAGTGCTCTAGTGAATATGTATTCGAAATGTGGAAGTATAAAAGAAGCTGCAAGGATCTTTGATGTGACAGAACTTGATGATATTATTTCCTGGACGGCGATGATTAATGGATATGCTGAACATGGGTACTACCGAGAAGCCATTGATCTGTTTGAGAAGATTCCTAGGGTTGGTCTGAAACCAGACTCGGTGACCTTCATTGGTGTTCTTGTTGCTTGTTGCCATGCTGGATTGGTTGATCTTGGTTTCCGCTACTTCAATTCAATGAAAAATGACTTTGGGAGTAATCCTGCAAAAGAACACTACGGCTGCATGATTGATCTCCTCTGTCGAGCTGGACGGTTAAGTGAGGCAGAGCATATGATCAAATGTATGCCATTTCAACAGGATGATGTTGTTTGGTCTATTCTCCTTAGAGCTTGTAGGCTCCATGGTGATGTCGACTGTGGAAGACGTGCTGCAGATGAGATCCTTAAATTGGATCCGAATTGTGCAGTGACTCACATAACCCTGGCTAACATGTATGCTGCTAGAGGAAAATGGAGGGAAGCAGCAGAAGTAAGGAAAATGATGAGATCAAAGGGGGTAATTAAGGAGCCGGGATGGTCTTGGATAAAGGTCAGGGATCGACTTTCTGCATTTGTTGCCGGAGATCGGTCTCATCCACAAGTTGATGATATATACAGTGTACTGGAATTACTAGCTTCAAAGGCAGAAGATACTTTTCAGGAAATTGGTTCTTCATTAATGGACACTGAAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00051 map00051

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

711

Amino Acids

79.32

Weight (kDa)

6.69

Isoelectric Point (pI)

33.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	179 - 227	1.2e-06	PPR repeat family
PPR_2	PF13041	281 - 328	9.9e-11	PPR repeat family
PPR_3	PF13812	281 - 324	2.8e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	381 - 426	5.8e-06	PPR repeat family
PPR_2	PF13041	483 - 531	2.9e-11	PPR repeat family
PPR	PF01535	485 - 514	5.2e-07	PPR repeat
E_motif	PF20431	600 - 662	1.6e-12	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008424)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47840
fragaria_vesca	FvH4_1g12800 FvH4_2g13800
malus_domestica	MD02G1143600.v1.1 MD15G1256800.v1.1
prunus_persica	Prupe.7G158100_v2.0.a1
pyrus_communis	pycom02g11350 pycom11g12090 pycom15g22480
rosa_chinensis	RchiOBHm_Chr2g0100941
rosa_laevigata	RLG00000016992 RLG00000017027
rosa_multiflora	Rmu_sc0001659.1_g000049 Rmu_sc0001862.1_g000015
rosa_roxburghii	Rroxscaffold_2G00141730
rosa_rugosa	Rorug02G0091300 Rorug02G0093800
rosa_samantha	Rh2AG141500 Rh2BG143000 Rh2BG146700 Rh2CG147900 Rh2DG147200
rosa_wichuraiana	Rw2G011100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	563, 917
Acc36I	ACCTGC	1 cut(s)	173
AccI	GTMKAC	1 cut(s)	1809
AccII	CGCG	1 cut(s)	647
AciI	CCGC	1 cut(s)	1618
AclWI	GGATC	5 cut(s)	1430, 1831, 1844, 1857, 2001
AcsI	RAATTY	2 cut(s)	330, 1066
AcuI	CTGAAG	2 cut(s)	30, 1092
AcyI	GRCGYC	1 cut(s)	198
AfaI	GTAC	6 cut(s)	363, 419, 782, 1365, 1496, 2058
AfeI	AGCGCT	1 cut(s)	1162
AfiI	CCNNNNNNNGG	5 cut(s)	883, 1095, 1538, 1846, 2022
AflIII	ACRYGT	5 cut(s)	207, 312, 474, 645, 1887
AjiI	CACGTC	1 cut(s)	1823
AjnI	CCWGG	3 cut(s)	325, 1457, 1878
AjuI	GAANNNNNNNTTGG	2 cut(s)	107, 139
AluBI	AGCT	8 cut(s)	44, 172, 750, 1205, 1415, 1703, 1787, 2072
AluI	AGCT	8 cut(s)	44, 172, 750, 1205, 1415, 1703, 1787, 2072
Alw21I	GWGCWC	2 cut(s)	752, 1375
Alw26I	GTCTC	3 cut(s)	189, 280, 2031
AlwI	GGATC	5 cut(s)	1430, 1831, 1844, 1857, 2001
Aor51HI	AGCGCT	1 cut(s)	1162
ApeKI	GCWGC	6 cut(s)	169, 1415, 1677, 1826, 1895, 1919
ApoI	RAATTY	2 cut(s)	330, 1066
ArsI	GACNNNNNNTTYG	2 cut(s)	9, 41
AseI	ATTAAT	2 cut(s)	1473, 2114
Asp700I	GAANNNNTTC	3 cut(s)	209, 737, 1206
AspA2I	CCTAGG	1 cut(s)	1532
AspLEI	GCGC	2 cut(s)	466, 1163
AspS9I	GGNCC	4 cut(s)	246, 340, 895, 1238
AsuC2I	CCSGG	3 cut(s)	202, 568, 1968
AsuHPI	GGTGA	3 cut(s)	1019, 1570, 1814
AsuII	TTCGAA	1 cut(s)	1391
AvaII	GGWCC	4 cut(s)	246, 340, 895, 1238
AvrII	CCTAGG	1 cut(s)	1532
BamHI	GGATCC	1 cut(s)	1849
BanII	GRGCYC	1 cut(s)	752
BbsI	GAAGAC	2 cut(s)	442, 1825
Bbv12I	GWGCWC	2 cut(s)	752, 1375
BbvI	GCAGC	6 cut(s)	181, 1402, 1664, 1813, 1882, 1931
BccI	CCATC	3 cut(s)	111, 1229, 1965
BceAI	ACGGC	2 cut(s)	1479, 1690
BciT130I	CCWGG	3 cut(s)	327, 1459, 1880
BciVI	GTATCC	1 cut(s)	828
BclI	TGATCA	1 cut(s)	1731
BcnI	CCSGG	3 cut(s)	202, 568, 1968
BcoDI	GTCTC	3 cut(s)	189, 280, 2031
BfaI	CTAG	7 cut(s)	107, 993, 1266, 1376, 1533, 1899, 2069
BfmI	CTRYAG	1 cut(s)	1827
BfoI	RGCGCY	1 cut(s)	1164
BfuAI	ACCTGC	1 cut(s)	173
BfuI	GTATCC	1 cut(s)	828
BglI	GCCNNNNNGGC	1 cut(s)	290
BisI	GCNGC	6 cut(s)	170, 1416, 1678, 1827, 1896, 1920
BlnI	CCTAGG	1 cut(s)	1532
BlsI	GCNGC	6 cut(s)	171, 1417, 1679, 1828, 1897, 1921
Bme1390I	CCNGG	6 cut(s)	202, 327, 568, 1459, 1880, 1968
Bme18I	GGWCC	4 cut(s)	246, 340, 895, 1238
BmgBI	CACGTC	1 cut(s)	1823
BmgT120I	GGNCC	4 cut(s)	246, 340, 895, 1238
BmiI	GGNNCC	4 cut(s)	342, 1796, 1851, 1965
BmrFI	CCNGG	6 cut(s)	202, 327, 568, 1459, 1880, 1968
BmsI	GCATC	1 cut(s)	271
BpiI	GAAGAC	2 cut(s)	442, 1825
BpmI	CTGGAG	1 cut(s)	996
Bpu14I	TTCGAA	1 cut(s)	1391
BpuEI	CTTGAG	2 cut(s)	1167, 1322
BpuMI	CCSGG	3 cut(s)	202, 568, 1968
BsaHI	GRCGYC	1 cut(s)	198
BsaI	GGTCTC	1 cut(s)	2031
BsaJI	CCNNGG	3 cut(s)	1532, 1798, 1878
Bsc4I	CCNNNNNNNGG	5 cut(s)	883, 1095, 1538, 1846, 2022
Bse118I	RCCGGY	2 cut(s)	581, 932
Bse1I	ACTGG	3 cut(s)	249, 984, 2064
Bse3DI	GCAATG	1 cut(s)	1302
BseBI	CCWGG	3 cut(s)	327, 1459, 1880
BseDI	CCNNGG	3 cut(s)	1532, 1798, 1878
BseGI	GGATG	7 cut(s)	512, 847, 1230, 1240, 1762, 1976, 2029
BseLI	CCNNNNNNNGG	5 cut(s)	883, 1095, 1538, 1846, 2022
BseMI	GCAATG	1 cut(s)	1302
BseMII	CTCAG	3 cut(s)	173, 239, 279
BseNI	ACTGG	3 cut(s)	249, 984, 2064
BseRI	GAGGAG	1 cut(s)	1682
BseXI	GCAGC	6 cut(s)	181, 1402, 1664, 1813, 1882, 1931
BsgI	GTGCAG	3 cut(s)	656, 1304, 1881
Bsh1236I	CGCG	1 cut(s)	647
BsiHKAI	GWGCWC	2 cut(s)	752, 1375
BsiSI	CCGG	6 cut(s)	202, 567, 582, 933, 1967, 2016
BslI	CCNNNNNNNGG	5 cut(s)	883, 1095, 1538, 1846, 2022
BsmAI	GTCTC	3 cut(s)	189, 280, 2031
BsmBI	CGTCTC	1 cut(s)	189
BsmI	GAATGC	2 cut(s)	71, 927
Bso31I	GGTCTC	1 cut(s)	2031
Bsp119I	TTCGAA	1 cut(s)	1391
Bsp1286I	GDGCHC	2 cut(s)	752, 1375
Bsp1407I	TGTACA	1 cut(s)	780
Bsp19I	CCATGG	1 cut(s)	1798
BspACI	CCGC	1 cut(s)	1618
BspCNI	CTCAG	3 cut(s)	172, 238, 280
BspFNI	CGCG	1 cut(s)	647
BspHI	TCATGA	1 cut(s)	1126
BspLI	GGNNCC	4 cut(s)	342, 1796, 1851, 1965
BspMAI	CTGCAG	1 cut(s)	1831
BspMI	ACCTGC	1 cut(s)	173
BspPI	GGATC	5 cut(s)	1430, 1831, 1844, 1857, 2001
BspT104I	TTCGAA	1 cut(s)	1391
BspTNI	GGTCTC	1 cut(s)	2031
BsrDI	GCAATG	1 cut(s)	1302
BsrFI	RCCGGY	2 cut(s)	581, 932
BsrGI	TGTACA	1 cut(s)	780
BsrI	ACTGG	3 cut(s)	249, 984, 2064
BssAI	RCCGGY	2 cut(s)	581, 932
BssECI	CCNNGG	3 cut(s)	1532, 1798, 1878
BssNI	GRCGYC	1 cut(s)	198
BssT1I	CCWWGG	2 cut(s)	1532, 1798
Bst2UI	CCWGG	3 cut(s)	327, 1459, 1880
Bst4CI	ACNGT	5 cut(s)	559, 899, 1710, 1814, 2054
Bst6I	CTCTTC	2 cut(s)	84, 1054
BstACI	GRCGYC	1 cut(s)	198
BstAPI	GCANNNNNTGC	1 cut(s)	2012
BstAUI	TGTACA	1 cut(s)	780
BstBI	TTCGAA	1 cut(s)	1391
BstC8I	GCNNGC	3 cut(s)	964, 1020, 1323
BstDEI	CTNAG	6 cut(s)	159, 225, 288, 353, 1116, 1781
BstDSI	CCRYGG	1 cut(s)	1798
BstEII	GGTNACC	1 cut(s)	1558
BstF5I	GGATG	7 cut(s)	512, 847, 1230, 1240, 1762, 1976, 2029
BstFNI	CGCG	1 cut(s)	647
BstH2I	RGCGCY	1 cut(s)	1164
BstHHI	GCGC	2 cut(s)	466, 1163
BstMAI	GTCTC	3 cut(s)	189, 280, 2031
BstMWI	GCNNNNNNNGC	5 cut(s)	290, 989, 1312, 2012, 2078
BstNI	CCWGG	3 cut(s)	327, 1459, 1880
BstNSI	RCATGY	5 cut(s)	211, 316, 478, 1022, 1891
BstPI	GGTNACC	1 cut(s)	1558
BstSCI	CCNGG	6 cut(s)	200, 325, 566, 1457, 1878, 1966
BstSFI	CTRYAG	1 cut(s)	1827
BstUI	CGCG	1 cut(s)	647
BstV1I	GCAGC	6 cut(s)	181, 1402, 1664, 1813, 1882, 1931
BstV2I	GAAGAC	2 cut(s)	442, 1825
BstX2I	RGATCY	3 cut(s)	1422, 1836, 1849
BstYI	RGATCY	3 cut(s)	1422, 1836, 1849
BsuI	GTATCC	1 cut(s)	828
BtgI	CCRYGG	1 cut(s)	1798
BtgZI	GCGATG	1 cut(s)	1481
BtrI	CACGTC	1 cut(s)	1823
BtsCI	GGATG	7 cut(s)	512, 847, 1230, 1240, 1762, 1976, 2029
BtsI	GCAGTG	2 cut(s)	466, 1869
BtsIMutI	CAGTG	4 cut(s)	466, 1869, 2059, 2121
BveI	ACCTGC	1 cut(s)	173
Cac8I	GCNNGC	3 cut(s)	964, 1020, 1323
CciI	TCATGA	1 cut(s)	1126
CfoI	GCGC	2 cut(s)	466, 1163
Cfr10I	RCCGGY	2 cut(s)	581, 932
Cfr13I	GGNCC	4 cut(s)	246, 340, 895, 1238
CseI	GACGC	2 cut(s)	206, 653
Csp6I	GTAC	6 cut(s)	362, 418, 781, 1364, 1495, 2057
CspCI	CAANNNNNGTGG	2 cut(s)	772, 807
CviQI	GTAC	6 cut(s)	362, 418, 781, 1364, 1495, 2057
DdeI	CTNAG	6 cut(s)	159, 225, 288, 353, 1116, 1781
Eam1104I	CTCTTC	2 cut(s)	84, 1054
EarI	CTCTTC	2 cut(s)	84, 1054
Ecl136II	GAGCTC	1 cut(s)	750
Eco130I	CCWWGG	2 cut(s)	1532, 1798
Eco24I	GRGCYC	1 cut(s)	752
Eco31I	GGTCTC	1 cut(s)	2031
Eco47I	GGWCC	4 cut(s)	246, 340, 895, 1238
Eco47III	AGCGCT	1 cut(s)	1162
Eco53kI	GAGCTC	1 cut(s)	750
Eco57I	CTGAAG	2 cut(s)	30, 1092
Eco91I	GGTNACC	1 cut(s)	1558
EcoICRI	GAGCTC	1 cut(s)	750
EcoO65I	GGTNACC	1 cut(s)	1558
EcoRII	CCWGG	3 cut(s)	325, 1457, 1878
EcoT14I	CCWWGG	2 cut(s)	1532, 1798
EcoT38I	GRGCYC	1 cut(s)	752
ErhI	CCWWGG	2 cut(s)	1532, 1798
Esp3I	CGTCTC	1 cut(s)	189
FauNDI	CATATG	1 cut(s)	1728
FbaI	TGATCA	1 cut(s)	1731
FblI	GTMKAC	1 cut(s)	1809
Fnu4HI	GCNGC	6 cut(s)	170, 1416, 1678, 1827, 1896, 1920
FokI	GGATG	7 cut(s)	519, 854, 1237, 1247, 1769, 1983, 2016
FriOI	GRGCYC	1 cut(s)	752
Fsp4HI	GCNGC	6 cut(s)	170, 1416, 1678, 1827, 1896, 1920
FspBI	CTAG	7 cut(s)	107, 993, 1266, 1376, 1533, 1899, 2069
GlaI	GCGC	2 cut(s)	465, 1162
GluI	GCNGC	6 cut(s)	170, 1416, 1678, 1827, 1896, 1920
GsuI	CTGGAG	1 cut(s)	996
HaeII	RGCGCY	1 cut(s)	1164
HapII	CCGG	6 cut(s)	202, 567, 582, 933, 1967, 2016
HgaI	GACGC	2 cut(s)	206, 653
HhaI	GCGC	2 cut(s)	466, 1163
Hin1I	GRCGYC	1 cut(s)	198
Hin6I	GCGC	2 cut(s)	464, 1161
HinP1I	GCGC	2 cut(s)	464, 1161
HincII	GTYRAC	1 cut(s)	1810
HindII	GTYRAC	1 cut(s)	1810
HindIII	AAGCTT	1 cut(s)	1203
HinfI	GANTC	5 cut(s)	712, 940, 1528, 1553, 1867
HpaII	CCGG	6 cut(s)	202, 567, 582, 933, 1967, 2016
HphI	GGTGA	3 cut(s)	1019, 1570, 1814
Hpy166II	GTNNAC	5 cut(s)	246, 377, 1010, 1810, 2057
Hpy188I	TCNGA	6 cut(s)	228, 280, 289, 616, 1545, 1854
Hpy188III	TCNNGA	8 cut(s)	86, 107, 470, 880, 890, 975, 1127, 2096
Hpy8I	GTNNAC	5 cut(s)	246, 377, 1010, 1810, 2057
Hpy99I	CGWCG	1 cut(s)	33
HpyAV	CCTTC	5 cut(s)	625, 664, 727, 1224, 1573
HpyCH4III	ACNGT	5 cut(s)	559, 899, 1710, 1814, 2054
HpyCH4IV	ACGT	4 cut(s)	135, 267, 1026, 1822
HpyF10VI	GCNNNNNNNGC	5 cut(s)	290, 989, 1312, 2012, 2078
HpyF3I	CTNAG	6 cut(s)	159, 225, 288, 353, 1116, 1781
HpySE526I	ACGT	4 cut(s)	135, 267, 1026, 1822
Hsp92I	GRCGYC	1 cut(s)	198
HspAI	GCGC	2 cut(s)	464, 1161
Ksp22I	TGATCA	1 cut(s)	1731
LmnI	GCTCC	3 cut(s)	1158, 1800, 1963
Lsp1109I	GCAGC	6 cut(s)	181, 1402, 1664, 1813, 1882, 1931
LweI	GCATC	1 cut(s)	271
MaeI	CTAG	7 cut(s)	107, 993, 1266, 1376, 1533, 1899, 2069
MaeII	ACGT	4 cut(s)	135, 267, 1026, 1822
MaeIII	GTNAC	6 cut(s)	584, 757, 1075, 1432, 1558, 1864
MfeI	CAATTG	2 cut(s)	122, 1013
MflI	RGATCY	3 cut(s)	1422, 1836, 1849
MhlI	GDGCHC	2 cut(s)	752, 1375
MluI	ACGCGT	1 cut(s)	645
MlyI	GAGTC	3 cut(s)	949, 1547, 1861
MmeI	TCCRAC	2 cut(s)	172, 582
MroXI	GAANNNNTTC	3 cut(s)	209, 737, 1206
MseI	TTAA	6 cut(s)	177, 1473, 1712, 1842, 1959, 2114
MslI	CAYNNNNRTG	3 cut(s)	479, 1326, 1803
MspA1I	CMGCKG	1 cut(s)	172
MspI	CCGG	6 cut(s)	202, 567, 582, 933, 1967, 2016
MspR9I	CCNGG	6 cut(s)	202, 327, 568, 1459, 1880, 1968
MunI	CAATTG	2 cut(s)	122, 1013
Mva1269I	GAATGC	2 cut(s)	71, 927
MvaI	CCWGG	3 cut(s)	327, 1459, 1880
MvnI	CGCG	1 cut(s)	647
MwoI	GCNNNNNNNGC	5 cut(s)	290, 989, 1312, 2012, 2078
NciI	CCSGG	3 cut(s)	202, 568, 1968
NcoI	CCATGG	1 cut(s)	1798
NdeI	CATATG	1 cut(s)	1728
NlaIV	GGNNCC	4 cut(s)	342, 1796, 1851, 1965
NmuCI	GTSAC	5 cut(s)	757, 1075, 1432, 1558, 1864
NspI	RCATGY	5 cut(s)	211, 316, 478, 1022, 1891
NspV	TTCGAA	1 cut(s)	1391
PaeI	GCATGC	1 cut(s)	1022
PagI	TCATGA	1 cut(s)	1126
PciI	ACATGT	4 cut(s)	207, 312, 474, 1887
PcsI	WCGNNNNNNNCGW	2 cut(s)	428, 671
PctI	GAATGC	2 cut(s)	71, 927
PdmI	GAANNNNTTC	3 cut(s)	209, 737, 1206
PfeI	GAWTC	2 cut(s)	712, 1528
PfoI	TCCNGGA	1 cut(s)	1457
PkrI	GCNGC	6 cut(s)	171, 1417, 1679, 1828, 1897, 1921
PleI	GAGTC	3 cut(s)	948, 1547, 1861
PpsI	GAGTC	3 cut(s)	948, 1547, 1861
PscI	ACATGT	4 cut(s)	207, 312, 474, 1887
PshBI	ATTAAT	2 cut(s)	1473, 2114
PsiI	TTATAA	2 cut(s)	563, 917
Psp124BI	GAGCTC	1 cut(s)	752
Psp6I	CCWGG	3 cut(s)	325, 1457, 1878
PspEI	GGTNACC	1 cut(s)	1558
PspGI	CCWGG	3 cut(s)	325, 1457, 1878
PspN4I	GGNNCC	4 cut(s)	342, 1796, 1851, 1965
PspPI	GGNCC	4 cut(s)	246, 340, 895, 1238
PstI	CTGCAG	1 cut(s)	1831
PsuI	RGATCY	3 cut(s)	1422, 1836, 1849
PvuII	CAGCTG	1 cut(s)	172
RsaI	GTAC	6 cut(s)	363, 419, 782, 1365, 1496, 2058
RsaNI	GTAC	6 cut(s)	362, 418, 781, 1364, 1495, 2057
RseI	CAYNNNNRTG	3 cut(s)	479, 1326, 1803
SacI	GAGCTC	1 cut(s)	752
SalI	GTCGAC	1 cut(s)	1808
SaqAI	TTAA	6 cut(s)	177, 1473, 1712, 1842, 1959, 2114
SatI	GCNGC	6 cut(s)	170, 1416, 1678, 1827, 1896, 1920
Sau96I	GGNCC	4 cut(s)	246, 340, 895, 1238
SchI	GAGTC	3 cut(s)	949, 1547, 1861
ScrFI	CCNGG	6 cut(s)	202, 327, 568, 1459, 1880, 1968
SduI	GDGCHC	2 cut(s)	752, 1375
SfaNI	GCATC	1 cut(s)	271
SfcI	CTRYAG	1 cut(s)	1827
SfuI	TTCGAA	1 cut(s)	1391
SinI	GGWCC	4 cut(s)	246, 340, 895, 1238
SmiMI	CAYNNNNRTG	3 cut(s)	479, 1326, 1803
SmlI	CTYRAG	2 cut(s)	1182, 1301
SmoI	CTYRAG	2 cut(s)	1182, 1301
SphI	GCATGC	1 cut(s)	1022
SsiI	CCGC	1 cut(s)	1618
SspI	AATATT	1 cut(s)	36
SspMI	CTAG	7 cut(s)	107, 993, 1266, 1376, 1533, 1899, 2069
SstI	GAGCTC	1 cut(s)	752
StyD4I	CCNGG	6 cut(s)	200, 325, 566, 1457, 1878, 1966
StyI	CCWWGG	2 cut(s)	1532, 1798
TaaI	ACNGT	5 cut(s)	559, 899, 1710, 1814, 2054
TaiI	ACGT	4 cut(s)	138, 270, 1029, 1825
TaqII	GACCGA	2 cut(s)	436, 2013
TatI	WGTACW	3 cut(s)	361, 780, 2056
TfiI	GAWTC	2 cut(s)	712, 1528
Tru1I	TTAA	6 cut(s)	177, 1473, 1712, 1842, 1959, 2114
Tru9I	TTAA	6 cut(s)	177, 1473, 1712, 1842, 1959, 2114
TscAI	CASTG	4 cut(s)	466, 1869, 2059, 2128
TseFI	GTSAC	5 cut(s)	757, 1075, 1432, 1558, 1864
TseI	GCWGC	6 cut(s)	169, 1415, 1677, 1826, 1895, 1919
Tsp45I	GTSAC	5 cut(s)	757, 1075, 1432, 1558, 1864
TspGWI	ACGGA	2 cut(s)	77, 1060
TspRI	CASTG	4 cut(s)	466, 1869, 2059, 2128
VpaK11BI	GGWCC	4 cut(s)	246, 340, 895, 1238
VspI	ATTAAT	2 cut(s)	1473, 2114
XapI	RAATTY	2 cut(s)	330, 1066
XbaI	TCTAGA	1 cut(s)	106
XceI	RCATGY	5 cut(s)	211, 316, 478, 1022, 1891
XmaJI	CCTAGG	1 cut(s)	1532
XmiI	GTMKAC	1 cut(s)	1809
XmnI	GAANNNNTTC	3 cut(s)	209, 737, 1206
XspI	CTAG	7 cut(s)	107, 993, 1266, 1376, 1533, 1899, 2069

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.