Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0008424

Physical Location & Seq

Genomic Coordinates Forward (+)

79934069 .. 79936288

Gene Structure 2220 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00141730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGGTTTTAACTATTAGACCTCAAATTCGAAGAATATTTACCAGTTCAGCCTTTGCTCGCCCAGAATGTAGAACCCTTCTGGTTCCCGAATCAAAAACAGAGCAACTAGAGCAGAAAACCCATCGCGCTAATCATGTAGATATGCTCGAACTCAACTCTCAACTAAAGCAGCTAGTCAAAATCGGTAATGTCAAAGACGCCCGGAAGATGTTCGATGAAATGCCAAAGAGAGATGAGGTTTCATGGACCAATATGATTTCAGGCTATGTTGGAGTCTCTGATTCCTCTGCAGCAGTGGCTCTGTTCTCAAACATGTGGGTGCAGCAAGGTCTCTGCATGGACCCTTTTCTTCTCAGCATTGCGCTCAAGGCTTGTGGACTTGAAAGGAACTTGTCTTATGGGGAAGTTGTACATGGGTACTCGGTGAAATCGGGTTTTGTGAACTCAGTCTTTGTGGGTAGTGCTCTTCTTGACATGTATATGAAGGTTGGTGAGATTGAGAAGGGTTGTAGAGTTTTCGACGCAATGCCGCTGAGAAATGTGGTGTCGTGGACTACCATTATCACTGGTCTCGTTCGCGCAGGTTATAATGTGGAGGGGTTGCGATATTTTGCTGAAATGTGGAGGTGTAGGGTGCAATGTGATGCGTATGCGTTTGCTATCTCGTTGAAGGCGTGTGCTGATTTGGGTGCTTTGAAGCGTGGGAGAGAAATTCACACGCAAACGATGAAGAAAGGGTTTGATGAGAACTCTTTCGTAGCCAACTCTCTTGCTACCATGTACAATAAATGTGGAAAATTGGACTATGGGGTGCAGTTGTTCGCGAACATGAGGATGCAGGATGTTGTTTCGTGGACATCAATCATTACATCGTATTTTTGGACGGGTCAAGAGGACCATGCAATCAAAGCATTTATGCGAATGCAGGAATCTGGTGTGCATCCTAATGAATACACTTTTGCAGCCGTTATCTCCGGATGTGCCAATCTTGCTAGAGTTGAATGGGGTGAACAATTGCATGCCAACGTGTTACGCTTGGGTCTTGCGGATTCTTTGTCAGTGGGAAATTCAATTATAACCATGTATGCCAAATGTGGGCGTTTGGCTTCAGCTTCTGTTGTGTTTCATGAGATGGGCAGAAAAGATATTGTTTCATGGACCACTGTAATTGCAGGGTATTCTCAAGCAGGTTATGGGGAAGAAGCTTTCAAGTATTTGTCATGGATGAGAAGGGAAGAACCAAAACCAAACGAGTATGGTTTTGCGAGTGTATTAAGTGTTTGTGGAAGCATGGCAATGCTTGAGCAAGGCAAGCAATTGCATGCTCATGTCCTAACGGTTGGTCTAGATTCTTACGTTATGGTACAAAGTGCCTTGGTCAATCTGTACTCGAAATGTGGAAGTATACAAGAGGCTGCAAAAATCTTTGATGTGACAAAAGCAAAAGATGATGATGTTATTTCATGGACGTCCATGATTAATGGATATGCTCAACATGGGTACTACCAAGAAGCCATCGATCTGTTTGAGAAGCTTCCTACGGTTGGTCTGAAACCGGACTCAGTGACCTTCATTGGTGTTCTTGCTGCATGTAGCCATGCTGGACTAGTTGATCTTGGTTTCCACTACTTCAATTCAATGAGCAATGACTTTAAGATTAGTCCTTCAAAAGAACACTACGGCTGCATGATTGATCTCCTTTGTCGAGCTGGACGGTTAAGTGAGGCAGACCACATGATCAAAAGTATGCCAGTTCAACAGGATGATGTTGTCTGGTCTACTCTACTTACAGCATGTAGGCTCCATGGTGATGTTGACTGCGGAAGACGCTGCAGAGGAGATTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00051 map00051

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

615

Amino Acids

68.53

Weight (kDa)

6.95

Isoelectric Point (pI)

33.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	179 - 227	5.8e-07	PPR repeat family
PPR_2	PF13041	281 - 329	4.5e-12	PPR repeat family
PPR_3	PF13812	281 - 327	1.7e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	381 - 428	9.4e-09	PPR repeat family
PPR_2	PF13041	485 - 532	2.4e-10	PPR repeat family
PPR	PF01535	487 - 513	1.6e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008424)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47840
fragaria_vesca	FvH4_1g12800 FvH4_2g13800
malus_domestica	MD02G1143600.v1.1 MD15G1256800.v1.1
prunus_persica	Prupe.7G158100_v2.0.a1
pyrus_communis	pycom02g11350 pycom11g12090 pycom15g22480
rosa_chinensis	RchiOBHm_Chr2g0100941
rosa_laevigata	RLG00000016992 RLG00000017027
rosa_multiflora	Rmu_sc0001659.1_g000049 Rmu_sc0001862.1_g000015
rosa_roxburghii	Rroxscaffold_2G00141730
rosa_rugosa	Rorug02G0091300 Rorug02G0093800
rosa_samantha	Rh2AG141500 Rh2BG143000 Rh2BG146700 Rh2CG147900 Rh2DG147200
rosa_wichuraiana	Rw2G011100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	588, 1076
AatII	GACGTC	1 cut(s)	1472
Acc36I	ACCTGC	2 cut(s)	572, 1178
AccI	GTMKAC	2 cut(s)	1405, 1778
AccII	CGCG	3 cut(s)	126, 579, 824
AccIII	TCCGGA	1 cut(s)	974
AciI	CCGC	3 cut(s)	530, 1046, 1821
AcsI	RAATTY	3 cut(s)	24, 711, 1066
AcuI	CTGAAG	1 cut(s)	1092
AcyI	GRCGYC	2 cut(s)	198, 1469
AfaI	GTAC	6 cut(s)	411, 419, 782, 1365, 1388, 1502
AfiI	CCNNNNNNNGG	2 cut(s)	1095, 1544
AflIII	ACRYGT	3 cut(s)	312, 474, 1026
AhlI	ACTAGT	1 cut(s)	1606
AluBI	AGCT	5 cut(s)	172, 1112, 1205, 1534, 1709
AluI	AGCT	5 cut(s)	172, 1112, 1205, 1534, 1709
Alw21I	GWGCWC	1 cut(s)	466
Alw26I	GTCTC	3 cut(s)	280, 335, 575
AlwNI	CAGNNNCTG	1 cut(s)	1115
Aor13HI	TCCGGA	1 cut(s)	974
ApeKI	GCWGC	8 cut(s)	169, 290, 322, 962, 1415, 1586, 1683, 1830
ApoI	RAATTY	3 cut(s)	24, 711, 1066
ArsI	GACNNNNNNTTYG	2 cut(s)	9, 41
AseI	ATTAAT	1 cut(s)	1479
Asp700I	GAANNNNTTC	2 cut(s)	209, 752
AspLEI	GCGC	3 cut(s)	128, 364, 581
AspS9I	GGNCC	4 cut(s)	246, 340, 895, 1158
AsuC2I	CCSGG	1 cut(s)	202
AsuHPI	GGTGA	4 cut(s)	436, 503, 1019, 1820
AsuII	TTCGAA	1 cut(s)	28
AvaII	GGWCC	4 cut(s)	246, 340, 895, 1158
BarI	GAAGNNNNNNTAC	2 cut(s)	22, 54
BbsI	GAAGAC	1 cut(s)	1831
Bbv12I	GWGCWC	1 cut(s)	466
BbvI	GCAGC	8 cut(s)	181, 302, 334, 974, 1402, 1573, 1670, 1817
BccI	CCATC	3 cut(s)	129, 1126, 1523
BceAI	ACGGC	2 cut(s)	950, 1696
BclI	TGATCA	1 cut(s)	1737
BcnI	CCSGG	1 cut(s)	202
BcoDI	GTCTC	3 cut(s)	280, 335, 575
BcuI	ACTAGT	1 cut(s)	1606
BfaI	CTAG	5 cut(s)	107, 173, 993, 1346, 1607
BfmI	CTRYAG	2 cut(s)	288, 1831
BfuAI	ACCTGC	2 cut(s)	572, 1178
BisI	GCNGC	9 cut(s)	170, 291, 323, 530, 963, 1416, 1587, 1684, 1831
BlsI	GCNGC	9 cut(s)	171, 292, 324, 531, 964, 1417, 1588, 1685, 1832
Bme1390I	CCNGG	1 cut(s)	202
Bme18I	GGWCC	4 cut(s)	246, 340, 895, 1158
BmgT120I	GGNCC	4 cut(s)	246, 340, 895, 1158
BmiI	GGNNCC	3 cut(s)	84, 342, 1802
BmrFI	CCNGG	1 cut(s)	202
BmsI	GCATC	3 cut(s)	634, 825, 949
BpiI	GAAGAC	1 cut(s)	1831
Bpu14I	TTCGAA	1 cut(s)	28
BpuEI	CTTGAG	3 cut(s)	350, 1167, 1322
BpuMI	CCSGG	1 cut(s)	202
Bsa29I	ATCGAT	1 cut(s)	1518
BsaHI	GRCGYC	2 cut(s)	198, 1469
BsaI	GGTCTC	2 cut(s)	335, 575
BsaJI	CCNNGG	2 cut(s)	1374, 1804
BsaWI	WCCGGW	2 cut(s)	974, 1555
Bsc4I	CCNNNNNNNGG	2 cut(s)	1095, 1544
Bse1I	ACTGG	3 cut(s)	42, 571, 1751
Bse3DI	GCAATG	5 cut(s)	357, 531, 644, 1302, 1651
BseAI	TCCGGA	1 cut(s)	974
BseCI	ATCGAT	1 cut(s)	1518
BseDI	CCNNGG	2 cut(s)	1374, 1804
BseGI	GGATG	6 cut(s)	840, 847, 940, 983, 1230, 1768
BseLI	CCNNNNNNNGG	2 cut(s)	1095, 1544
BseMI	GCAATG	5 cut(s)	357, 531, 644, 1302, 1651
BseMII	CTCAG	4 cut(s)	367, 459, 524, 1575
BseNI	ACTGG	3 cut(s)	42, 571, 1751
BseXI	GCAGC	8 cut(s)	181, 302, 334, 974, 1402, 1573, 1670, 1817
BsgI	GTGCAG	2 cut(s)	341, 833
Bsh1236I	CGCG	3 cut(s)	126, 579, 824
BshVI	ATCGAT	1 cut(s)	1518
BsiHKAI	GWGCWC	1 cut(s)	466
BsiSI	CCGG	3 cut(s)	202, 975, 1556
BslI	CCNNNNNNNGG	2 cut(s)	1095, 1544
BsmAI	GTCTC	3 cut(s)	280, 335, 575
BsmI	GAATGC	1 cut(s)	927
Bso31I	GGTCTC	2 cut(s)	335, 575
Bsp119I	TTCGAA	1 cut(s)	28
Bsp1286I	GDGCHC	1 cut(s)	466
Bsp13I	TCCGGA	1 cut(s)	974
Bsp1407I	TGTACA	2 cut(s)	409, 780
Bsp143I	GATC	4 cut(s)	1519, 1612, 1693, 1737
Bsp19I	CCATGG	1 cut(s)	1804
Bsp68I	TCGCGA	1 cut(s)	824
BspACI	CCGC	3 cut(s)	530, 1046, 1821
BspCNI	CTCAG	4 cut(s)	366, 458, 525, 1574
BspDI	ATCGAT	1 cut(s)	1518
BspEI	TCCGGA	1 cut(s)	974
BspFNI	CGCG	3 cut(s)	126, 579, 824
BspHI	TCATGA	1 cut(s)	1126
BspLI	GGNNCC	3 cut(s)	84, 342, 1802
BspMAI	CTGCAG	2 cut(s)	292, 1835
BspMI	ACCTGC	2 cut(s)	572, 1178
BspQI	GCTCTTC	1 cut(s)	471
BspT104I	TTCGAA	1 cut(s)	28
BspTNI	GGTCTC	2 cut(s)	335, 575
BsrDI	GCAATG	5 cut(s)	357, 531, 644, 1302, 1651
BsrGI	TGTACA	2 cut(s)	409, 780
BsrI	ACTGG	3 cut(s)	42, 571, 1751
BssECI	CCNNGG	2 cut(s)	1374, 1804
BssMI	GATC	4 cut(s)	1519, 1612, 1693, 1737
BssNAI	GTATAC	1 cut(s)	1406
BssNI	GRCGYC	2 cut(s)	198, 1469
BssT1I	CCWWGG	2 cut(s)	1374, 1804
Bst1107I	GTATAC	1 cut(s)	1406
Bst4CI	ACNGT	4 cut(s)	1165, 1339, 1543, 1716
Bst6I	CTCTTC	1 cut(s)	471
BstACI	GRCGYC	2 cut(s)	198, 1469
BstAUI	TGTACA	2 cut(s)	409, 780
BstBI	TTCGAA	1 cut(s)	28
BstC8I	GCNNGC	4 cut(s)	58, 1020, 1313, 1323
BstDEI	CTNAG	4 cut(s)	353, 445, 533, 1561
BstDSI	CCRYGG	1 cut(s)	1804
BstF5I	GGATG	6 cut(s)	840, 847, 940, 983, 1230, 1768
BstFNI	CGCG	3 cut(s)	126, 579, 824
BstHHI	GCGC	3 cut(s)	128, 364, 581
BstKTI	GATC	4 cut(s)	1522, 1615, 1696, 1740
BstMAI	GTCTC	3 cut(s)	280, 335, 575
BstMBI	GATC	4 cut(s)	1519, 1612, 1693, 1737
BstMWI	GCNNNNNNNGC	7 cut(s)	109, 296, 368, 908, 989, 1312, 1827
BstNSI	RCATGY	6 cut(s)	316, 478, 1022, 1325, 1593, 1797
BstSCI	CCNGG	1 cut(s)	200
BstSFI	CTRYAG	2 cut(s)	288, 1831
BstUI	CGCG	3 cut(s)	126, 579, 824
BstV1I	GCAGC	8 cut(s)	181, 302, 334, 974, 1402, 1573, 1670, 1817
BstV2I	GAAGAC	1 cut(s)	1831
BstZ17I	GTATAC	1 cut(s)	1406
Bsu15I	ATCGAT	1 cut(s)	1518
BsuTUI	ATCGAT	1 cut(s)	1518
BtgI	CCRYGG	1 cut(s)	1804
BtgZI	GCGATG	1 cut(s)	107
BtsCI	GGATG	6 cut(s)	840, 847, 940, 983, 1230, 1768
BtsI	GCAGTG	1 cut(s)	300
BtsIMutI	CAGTG	5 cut(s)	300, 564, 1065, 1161, 1569
BtuMI	TCGCGA	1 cut(s)	824
BveI	ACCTGC	2 cut(s)	572, 1178
Cac8I	GCNNGC	4 cut(s)	58, 1020, 1313, 1323
CaiI	CAGNNNCTG	1 cut(s)	1115
CciI	TCATGA	1 cut(s)	1126
CfoI	GCGC	3 cut(s)	128, 364, 581
Cfr13I	GGNCC	4 cut(s)	246, 340, 895, 1158
ClaI	ATCGAT	1 cut(s)	1518
CseI	GACGC	3 cut(s)	206, 530, 1836
Csp6I	GTAC	6 cut(s)	410, 418, 781, 1364, 1387, 1501
CspCI	CAANNNNNGTGG	6 cut(s)	355, 390, 772, 807, 1150, 1185
CviQI	GTAC	6 cut(s)	410, 418, 781, 1364, 1387, 1501
DdeI	CTNAG	4 cut(s)	353, 445, 533, 1561
DpnI	GATC	4 cut(s)	1521, 1614, 1695, 1739
DpnII	GATC	4 cut(s)	1519, 1612, 1693, 1737
Eam1104I	CTCTTC	1 cut(s)	471
EarI	CTCTTC	1 cut(s)	471
Eco130I	CCWWGG	2 cut(s)	1374, 1804
Eco31I	GGTCTC	2 cut(s)	335, 575
Eco47I	GGWCC	4 cut(s)	246, 340, 895, 1158
Eco57I	CTGAAG	1 cut(s)	1092
EcoT14I	CCWWGG	2 cut(s)	1374, 1804
ErhI	CCWWGG	2 cut(s)	1374, 1804
FbaI	TGATCA	1 cut(s)	1737
FblI	GTMKAC	2 cut(s)	1405, 1778
Fnu4HI	GCNGC	9 cut(s)	170, 291, 323, 530, 963, 1416, 1587, 1684, 1831
FokI	GGATG	6 cut(s)	847, 854, 927, 990, 1237, 1775
Fsp4HI	GCNGC	9 cut(s)	170, 291, 323, 530, 963, 1416, 1587, 1684, 1831
FspBI	CTAG	5 cut(s)	107, 173, 993, 1346, 1607
GlaI	GCGC	3 cut(s)	127, 363, 580
GluI	GCNGC	9 cut(s)	170, 291, 323, 530, 963, 1416, 1587, 1684, 1831
HapII	CCGG	3 cut(s)	202, 975, 1556
HgaI	GACGC	3 cut(s)	206, 530, 1836
HhaI	GCGC	3 cut(s)	128, 364, 581
Hin1I	GRCGYC	2 cut(s)	198, 1469
Hin6I	GCGC	3 cut(s)	126, 362, 579
HinP1I	GCGC	3 cut(s)	126, 362, 579
HincII	GTYRAC	1 cut(s)	1816
HindII	GTYRAC	1 cut(s)	1816
HindIII	AAGCTT	2 cut(s)	1203, 1532
HinfI	GANTC	8 cut(s)	89, 273, 281, 929, 1049, 1349, 1559, 1841
HpaII	CCGG	3 cut(s)	202, 975, 1556
HphI	GGTGA	4 cut(s)	436, 503, 1019, 1820
Hpy166II	GTNNAC	8 cut(s)	377, 442, 552, 855, 1010, 1406, 1779, 1816
Hpy188I	TCNGA	2 cut(s)	280, 1551
Hpy188III	TCNNGA	7 cut(s)	86, 470, 823, 890, 975, 1127, 1346
Hpy8I	GTNNAC	8 cut(s)	377, 442, 552, 855, 1010, 1406, 1779, 1816
Hpy99I	CGWCG	1 cut(s)	524
HpyAV	CCTTC	7 cut(s)	86, 478, 496, 664, 1224, 1579, 1674
HpyCH4III	ACNGT	4 cut(s)	1165, 1339, 1543, 1716
HpyCH4IV	ACGT	3 cut(s)	1026, 1356, 1469
HpyF10VI	GCNNNNNNNGC	7 cut(s)	109, 296, 368, 908, 989, 1312, 1827
HpyF3I	CTNAG	4 cut(s)	353, 445, 533, 1561
HpySE526I	ACGT	3 cut(s)	1026, 1356, 1469
Hsp92I	GRCGYC	2 cut(s)	198, 1469
HspAI	GCGC	3 cut(s)	126, 362, 579
Kpn2I	TCCGGA	1 cut(s)	974
Ksp22I	TGATCA	1 cut(s)	1737
Kzo9I	GATC	4 cut(s)	1519, 1612, 1693, 1737
LguI	GCTCTTC	1 cut(s)	471
LmnI	GCTCC	1 cut(s)	1806
Lsp1109I	GCAGC	8 cut(s)	181, 302, 334, 974, 1402, 1573, 1670, 1817
LweI	GCATC	3 cut(s)	634, 825, 949
MaeI	CTAG	5 cut(s)	107, 173, 993, 1346, 1607
MaeII	ACGT	3 cut(s)	1026, 1356, 1469
MaeIII	GTNAC	3 cut(s)	1029, 1432, 1564
MalI	GATC	4 cut(s)	1521, 1614, 1695, 1739
MboI	GATC	4 cut(s)	1519, 1612, 1693, 1737
MboII	GAAGA	8 cut(s)	42, 217, 341, 458, 742, 1211, 1247, 1836
MfeI	CAATTG	2 cut(s)	1013, 1316
MhlI	GDGCHC	1 cut(s)	466
MluCI	AATT	9 cut(s)	24, 711, 797, 1013, 1066, 1071, 1167, 1316, 1633
MlyI	GAGTC	2 cut(s)	282, 1553
MmeI	TCCRAC	1 cut(s)	250
MroI	TCCGGA	1 cut(s)	974
MroXI	GAANNNNTTC	2 cut(s)	209, 752
MseI	TTAA	6 cut(s)	8, 1274, 1479, 1653, 1718, 1846
MslI	CAYNNNNRTG	7 cut(s)	317, 479, 833, 945, 1295, 1326, 1809
MspA1I	CMGCKG	1 cut(s)	532
MspI	CCGG	3 cut(s)	202, 975, 1556
MspR9I	CCNGG	1 cut(s)	202
MunI	CAATTG	2 cut(s)	1013, 1316
Mva1269I	GAATGC	1 cut(s)	927
MvnI	CGCG	3 cut(s)	126, 579, 824
MwoI	GCNNNNNNNGC	7 cut(s)	109, 296, 368, 908, 989, 1312, 1827
NciI	CCSGG	1 cut(s)	202
NcoI	CCATGG	1 cut(s)	1804
NdeII	GATC	4 cut(s)	1519, 1612, 1693, 1737
NlaIV	GGNNCC	3 cut(s)	84, 342, 1802
NmuCI	GTSAC	2 cut(s)	1432, 1564
NruI	TCGCGA	1 cut(s)	824
NspI	RCATGY	6 cut(s)	316, 478, 1022, 1325, 1593, 1797
NspV	TTCGAA	1 cut(s)	28
PaeI	GCATGC	2 cut(s)	1022, 1325
PagI	TCATGA	1 cut(s)	1126
PciI	ACATGT	2 cut(s)	312, 474
PciSI	GCTCTTC	1 cut(s)	471
PcsI	WCGNNNNNNNCGW	1 cut(s)	671
PctI	GAATGC	1 cut(s)	927
PdmI	GAANNNNTTC	2 cut(s)	209, 752
PfeI	GAWTC	6 cut(s)	89, 281, 929, 1049, 1349, 1841
PkrI	GCNGC	9 cut(s)	171, 292, 324, 531, 964, 1417, 1588, 1685, 1832
PleI	GAGTC	2 cut(s)	281, 1553
PpsI	GAGTC	2 cut(s)	281, 1553
PscI	ACATGT	2 cut(s)	312, 474
PshBI	ATTAAT	1 cut(s)	1479
PsiI	TTATAA	2 cut(s)	588, 1076
PspN4I	GGNNCC	3 cut(s)	84, 342, 1802
PspPI	GGNCC	4 cut(s)	246, 340, 895, 1158
PstI	CTGCAG	2 cut(s)	292, 1835
PstNI	CAGNNNCTG	1 cut(s)	1115
RruI	TCGCGA	1 cut(s)	824
RsaI	GTAC	6 cut(s)	411, 419, 782, 1365, 1388, 1502
RsaNI	GTAC	6 cut(s)	410, 418, 781, 1364, 1387, 1501
RseI	CAYNNNNRTG	7 cut(s)	317, 479, 833, 945, 1295, 1326, 1809
SapI	GCTCTTC	1 cut(s)	471
SaqAI	TTAA	6 cut(s)	8, 1274, 1479, 1653, 1718, 1846
SatI	GCNGC	9 cut(s)	170, 291, 323, 530, 963, 1416, 1587, 1684, 1831
Sau3AI	GATC	4 cut(s)	1519, 1612, 1693, 1737
Sau96I	GGNCC	4 cut(s)	246, 340, 895, 1158
SchI	GAGTC	2 cut(s)	282, 1553
ScrFI	CCNGG	1 cut(s)	202
SduI	GDGCHC	1 cut(s)	466
SfaNI	GCATC	3 cut(s)	634, 825, 949
SfcI	CTRYAG	2 cut(s)	288, 1831
SfuI	TTCGAA	1 cut(s)	28
SinI	GGWCC	4 cut(s)	246, 340, 895, 1158
SmiMI	CAYNNNNRTG	7 cut(s)	317, 479, 833, 945, 1295, 1326, 1809
SmlI	CTYRAG	3 cut(s)	365, 1182, 1301
SmoI	CTYRAG	3 cut(s)	365, 1182, 1301
SpeI	ACTAGT	1 cut(s)	1606
SphI	GCATGC	2 cut(s)	1022, 1325
Sse9I	AATT	9 cut(s)	24, 711, 797, 1013, 1066, 1071, 1167, 1316, 1633
SsiI	CCGC	3 cut(s)	530, 1046, 1821
SspI	AATATT	1 cut(s)	36
SspMI	CTAG	5 cut(s)	107, 173, 993, 1346, 1607
StyD4I	CCNGG	1 cut(s)	200
StyI	CCWWGG	2 cut(s)	1374, 1804
TaaI	ACNGT	4 cut(s)	1165, 1339, 1543, 1716
TaiI	ACGT	3 cut(s)	1029, 1359, 1472
TaqI	TCGA	7 cut(s)	28, 147, 213, 519, 1391, 1518, 1705
TasI	AATT	9 cut(s)	24, 711, 797, 1013, 1066, 1071, 1167, 1316, 1633
TatI	WGTACW	3 cut(s)	409, 780, 1386
TauI	GCSGC	1 cut(s)	532
TfiI	GAWTC	6 cut(s)	89, 281, 929, 1049, 1349, 1841
Tru1I	TTAA	6 cut(s)	8, 1274, 1479, 1653, 1718, 1846
Tru9I	TTAA	6 cut(s)	8, 1274, 1479, 1653, 1718, 1846
TscAI	CASTG	5 cut(s)	300, 571, 1065, 1168, 1569
TseFI	GTSAC	2 cut(s)	1432, 1564
TseI	GCWGC	8 cut(s)	169, 290, 322, 962, 1415, 1586, 1683, 1830
Tsp45I	GTSAC	2 cut(s)	1432, 1564
TspDTI	ATGAA	9 cut(s)	231, 231, 497, 743, 963, 1115, 1143, 1452, 1561
TspRI	CASTG	5 cut(s)	300, 571, 1065, 1168, 1569
VpaK11BI	GGWCC	4 cut(s)	246, 340, 895, 1158
VspI	ATTAAT	1 cut(s)	1479
XapI	RAATTY	3 cut(s)	24, 711, 1066
XbaI	TCTAGA	1 cut(s)	1345
XceI	RCATGY	6 cut(s)	316, 478, 1022, 1325, 1593, 1797
XmiI	GTMKAC	2 cut(s)	1405, 1778
XmnI	GAANNNNTTC	2 cut(s)	209, 752
XspI	CTAG	5 cut(s)	107, 173, 993, 1346, 1607
ZraI	GACGTC	1 cut(s)	1470

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.