Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0008424

Physical Location & Seq

Genomic Coordinates Reverse (-)

12235769 .. 12237637

Gene Structure 1869 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000017027

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGATTTCAGGCTATGTTGGAGTCTCTGATTCCTCTGAAGCATTGGCTCTGTTCTCACACATGTGGGTGCAGCCAGGTCTCTGCATGGACCCTTTTCTTCTCAGCATTGCGCTCAAGGCTTGTGGACTTGGTATGAACTTGTCTTATGGGGAAGTTGTACATGGGTACTCAGTGAAATCGGGTTTTGTGAACTCGGTCTTTGTGGGAAGTGCTCTTCTTGACATGTATATGAAGGTTGGTGAGATTGGCAAGGGTTGTAGAGTTTTCGACGCGATGCCGCTGAGAAATGTGGTGTCGTGGACTACCATTATCACTGGTCTCGTTCGCGCAGGTTATAATGTGGAGGGGTTGCAATATTTTGCTGAAATGTGGAGGTGTAGGGTACAATGTGATGCGTATGCGTTTGCTATCTCGTTGAAGGCATGTGCTGATTTGGGTGCTTTGAAGTGTGGGAGAGAAATTCACACGCAAACGATGAAGAAAGGGCTTGATGAGAACTCTTTCGTAGCCAACTCTCTTGCTACCATGTACAATAAATGTGGAAAATTGGACTATGGGGTGCAGTTGTTCGCGAACATGAGGACGCAGGATGTTGTTTCGTGGACATCAATCATTACATCGTATTTTTGGACGGGTCAAGGGGACCATGCAATCAAAGCATTTATGCGAATGCAGGAATCTGGTGTGCGTCCTAATGAGTACACTTTTGCAGCCATTATCTCCGGATGTGCCAATCTTGCTAGAGCTGAATGGGGTGAACAATTGCATGCCAACGTGTTACGCTTGGGTCTTGCGGATTCTTTGTCAGTGGGAAATTCAATTATAACCATGTATGCCAAATGTGGGCGTTTGGCTTCAGCTTCTGTTGTGTTCCATGAGATGGGCAGAAAAGATATTATTTCATGGACCACTGTAATTGCAGGTATACAAGAGGCTGCAAAAATCTTTGATGTGACAAAAGAAAAAGATGATGATGTTATTTCATGGACGTCCATGATTAATGGATATGCTCAACATGGGTACTACCACGAAGCCATTGATCTGTTTGAGAAGCTTCCTACGGTTGGTCTGAAACCGGACTCAGTGACCTTCACTGGTGTTCTTGCTGCGTGTAGCCATGCTGGACTAGTTGATCTTGGTTTCCACTACTTCAATTCAATGAGCAATGAATTTAAGATTAGTCCTTCAAAAGAACACTACGGCTGCATGATTGATCTCCTTTGTCGAGCTGGACAGTTAAGTGAAGCAGAGCACATGATCAAAAGTATGCCAGTTCAACAGGATGATATTGTCTGGTCTACTCTACTTACAGCATGTAGGCTCCATGGTGATGTTGACTGCGGAAGACGCGCTGCAGAGGAGATTCTCAAATTAAATCCTAATTGTGCAGTGACTCACATAACGCTAGCTGGTATTTATGCTGCCAAAGGAATGTGGAGGGAAGCCGCAGAGGTAAGGAGAATGATGAGATCAAAGGGCGTAATTAAGGAACCCGGATGGTCTGGGATAGAGATCAAGAATGGGATTTCTGTGTTTGTTGCTGGAGATAGGTCTCATCCACAAGGTGATGAGATATATAGTGTGCTGGAATTACTAGATTCAAAGGCAGAGATTTCTACTCGGGAAACAGTTCTTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00051 map00051

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

547

Amino Acids

60.03

Weight (kDa)

6.16

Isoelectric Point (pI)

29.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	95 - 143	5.1e-07	PPR repeat family
PPR_2	PF13041	197 - 245	2.9e-13	PPR repeat family
PPR_3	PF13812	197 - 244	6.5e-08	Pentatricopeptide repeat domain
PPR_2	PF13041	325 - 372	1.5e-11	PPR repeat family
PPR	PF01535	327 - 353	1.4e-07	PPR repeat
E_motif	PF20431	442 - 504	8.3e-10	E motif
Eplus_motif	PF20430	512 - 530	4.5e-06	E+ motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008424)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47840
fragaria_vesca	FvH4_1g12800 FvH4_2g13800
malus_domestica	MD02G1143600.v1.1 MD15G1256800.v1.1
prunus_persica	Prupe.7G158100_v2.0.a1
pyrus_communis	pycom02g11350 pycom11g12090 pycom15g22480
rosa_chinensis	RchiOBHm_Chr2g0100941
rosa_laevigata	RLG00000016992 RLG00000017027
rosa_multiflora	Rmu_sc0001659.1_g000049 Rmu_sc0001862.1_g000015
rosa_roxburghii	Rroxscaffold_2G00141730
rosa_rugosa	Rorug02G0091300 Rorug02G0093800
rosa_samantha	Rh2AG141500 Rh2BG143000 Rh2BG146700 Rh2CG147900 Rh2DG147200
rosa_wichuraiana	Rw2G011100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	336, 824
AatII	GACGTC	1 cut(s)	992
Acc36I	ACCTGC	2 cut(s)	320, 911
AccB7I	CCANNNNNTGG	1 cut(s)	880
AccI	GTMKAC	2 cut(s)	925, 1298
AccII	CGCG	4 cut(s)	272, 327, 572, 1350
AccIII	TCCGGA	1 cut(s)	722
AciI	CCGC	4 cut(s)	278, 794, 1341, 1446
AcsI	RAATTY	3 cut(s)	459, 814, 1169
AcuI	CTGAAG	2 cut(s)	57, 840
AcyI	GRCGYC	1 cut(s)	989
AdeI	CACNNNGTG	1 cut(s)	1565
AfaI	GTAC	6 cut(s)	159, 167, 384, 530, 701, 1022
AfiI	CCNNNNNNNGG	3 cut(s)	843, 880, 1064
AflIII	ACRYGT	3 cut(s)	60, 222, 774
AgsI	TTSAA	8 cut(s)	418, 445, 819, 1153, 1158, 1188, 1277, 1602
AhlI	ACTAGT	1 cut(s)	1126
AjnI	CCWGG	1 cut(s)	73
AleI	CACNNNNGTG	1 cut(s)	61
AluBI	AGCT	5 cut(s)	746, 860, 1054, 1229, 1409
AluI	AGCT	5 cut(s)	746, 860, 1054, 1229, 1409
Alw21I	GWGCWC	2 cut(s)	214, 1254
Alw26I	GTCTC	4 cut(s)	28, 83, 323, 1557
AlwNI	CAGNNNCTG	1 cut(s)	863
Ama87I	CYCGRG	1 cut(s)	1620
Aor13HI	TCCGGA	1 cut(s)	722
ApeKI	GCWGC	7 cut(s)	70, 710, 935, 1106, 1203, 1352, 1421
ApoI	RAATTY	3 cut(s)	459, 814, 1169
AseI	ATTAAT	1 cut(s)	999
Asp700I	GAANNNNTTC	2 cut(s)	500, 1629
AspLEI	GCGC	3 cut(s)	112, 329, 1352
AspS9I	GGNCC	3 cut(s)	88, 643, 906
AsuC2I	CCSGG	1 cut(s)	1494
AsuHPI	GGTGA	4 cut(s)	251, 767, 1340, 1577
AsuNHI	GCTAGC	1 cut(s)	1405
AvaI	CYCGRG	1 cut(s)	1620
AvaII	GGWCC	3 cut(s)	88, 643, 906
BbsI	GAAGAC	1 cut(s)	1351
Bbv12I	GWGCWC	2 cut(s)	214, 1254
BbvI	GCAGC	7 cut(s)	82, 722, 922, 1093, 1190, 1339, 1408
BccI	CCATC	2 cut(s)	874, 1491
BceAI	ACGGC	1 cut(s)	1216
BciT130I	CCWGG	1 cut(s)	75
BclI	TGATCA	1 cut(s)	1257
BcnI	CCSGG	1 cut(s)	1494
BcoDI	GTCTC	4 cut(s)	28, 83, 323, 1557
BcuI	ACTAGT	1 cut(s)	1126
BfaI	CTAG	4 cut(s)	741, 1127, 1406, 1595
BfmI	CTRYAG	1 cut(s)	1353
BfuAI	ACCTGC	2 cut(s)	320, 911
BisI	GCNGC	9 cut(s)	71, 278, 711, 936, 1107, 1204, 1353, 1422, 1446
BlsI	GCNGC	9 cut(s)	72, 279, 712, 937, 1108, 1205, 1354, 1423, 1447
Bme1390I	CCNGG	2 cut(s)	75, 1494
Bme18I	GGWCC	3 cut(s)	88, 643, 906
BmeT110I	CYCGRG	1 cut(s)	1620
BmgT120I	GGNCC	3 cut(s)	88, 643, 906
BmiI	GGNNCC	4 cut(s)	90, 644, 1322, 1491
BmrFI	CCNGG	2 cut(s)	75, 1494
BmsI	GCATC	2 cut(s)	264, 382
BmtI	GCTAGC	1 cut(s)	1409
BpiI	GAAGAC	1 cut(s)	1351
BpmI	CTGGAG	1 cut(s)	1563
BpuEI	CTTGAG	1 cut(s)	98
BpuMI	CCSGG	1 cut(s)	1494
BsaBI	GATNNNNATC	1 cut(s)	1511
BsaHI	GRCGYC	1 cut(s)	989
BsaI	GGTCTC	3 cut(s)	83, 323, 1557
BsaJI	CCNNGG	1 cut(s)	1324
BsaWI	WCCGGW	2 cut(s)	722, 1075
Bsc4I	CCNNNNNNNGG	3 cut(s)	843, 880, 1064
Bse1I	ACTGG	3 cut(s)	319, 1099, 1271
Bse3DI	GCAATG	2 cut(s)	105, 1171
Bse8I	GATNNNNATC	1 cut(s)	1511
BseAI	TCCGGA	1 cut(s)	722
BseBI	CCWGG	1 cut(s)	75
BseDI	CCNNGG	1 cut(s)	1324
BseGI	GGATG	5 cut(s)	595, 731, 1288, 1502, 1555
BseJI	GATNNNNATC	1 cut(s)	1511
BseLI	CCNNNNNNNGG	3 cut(s)	843, 880, 1064
BseMI	GCAATG	2 cut(s)	105, 1171
BseMII	CTCAG	4 cut(s)	115, 183, 272, 1095
BseNI	ACTGG	3 cut(s)	319, 1099, 1271
BseRI	GAGGAG	1 cut(s)	1373
BseXI	GCAGC	7 cut(s)	82, 722, 922, 1093, 1190, 1339, 1408
BsgI	GTGCAG	3 cut(s)	89, 581, 1407
Bsh1236I	CGCG	4 cut(s)	272, 327, 572, 1350
BsiHKAI	GWGCWC	2 cut(s)	214, 1254
BsiHKCI	CYCGRG	1 cut(s)	1620
BsiSI	CCGG	3 cut(s)	723, 1076, 1494
BslFI	GGGAC	1 cut(s)	656
BslI	CCNNNNNNNGG	3 cut(s)	843, 880, 1064
BsmAI	GTCTC	4 cut(s)	28, 83, 323, 1557
BsmFI	GGGAC	1 cut(s)	656
BsmI	GAATGC	1 cut(s)	675
Bso31I	GGTCTC	3 cut(s)	83, 323, 1557
BsoBI	CYCGRG	1 cut(s)	1620
Bsp1286I	GDGCHC	2 cut(s)	214, 1254
Bsp13I	TCCGGA	1 cut(s)	722
Bsp1407I	TGTACA	2 cut(s)	157, 528
Bsp143I	GATC	6 cut(s)	1039, 1132, 1213, 1257, 1469, 1512
Bsp19I	CCATGG	1 cut(s)	1324
Bsp68I	TCGCGA	1 cut(s)	572
BspACI	CCGC	4 cut(s)	278, 794, 1341, 1446
BspCNI	CTCAG	4 cut(s)	114, 182, 273, 1094
BspEI	TCCGGA	1 cut(s)	722
BspFNI	CGCG	4 cut(s)	272, 327, 572, 1350
BspLI	GGNNCC	4 cut(s)	90, 644, 1322, 1491
BspMAI	CTGCAG	1 cut(s)	1357
BspMI	ACCTGC	2 cut(s)	320, 911
BspOI	GCTAGC	1 cut(s)	1409
BspQI	GCTCTTC	1 cut(s)	219
BspTNI	GGTCTC	3 cut(s)	83, 323, 1557
BsrDI	GCAATG	2 cut(s)	105, 1171
BsrGI	TGTACA	2 cut(s)	157, 528
BsrI	ACTGG	3 cut(s)	319, 1099, 1271
BssECI	CCNNGG	1 cut(s)	1324
BssMI	GATC	6 cut(s)	1039, 1132, 1213, 1257, 1469, 1512
BssNAI	GTATAC	1 cut(s)	926
BssNI	GRCGYC	1 cut(s)	989
BssT1I	CCWWGG	1 cut(s)	1324
Bst1107I	GTATAC	1 cut(s)	926
Bst2UI	CCWGG	1 cut(s)	75
Bst4CI	ACNGT	4 cut(s)	913, 1063, 1236, 1630
Bst6I	CTCTTC	1 cut(s)	219
BstACI	GRCGYC	1 cut(s)	989
BstAUI	TGTACA	2 cut(s)	157, 528
BstC8I	GCNNGC	2 cut(s)	768, 1407
BstDEI	CTNAG	4 cut(s)	101, 169, 281, 1081
BstDSI	CCRYGG	1 cut(s)	1324
BstF5I	GGATG	5 cut(s)	595, 731, 1288, 1502, 1555
BstFNI	CGCG	4 cut(s)	272, 327, 572, 1350
BstHHI	GCGC	3 cut(s)	112, 329, 1352
BstKTI	GATC	6 cut(s)	1042, 1135, 1216, 1260, 1472, 1515
BstMAI	GTCTC	4 cut(s)	28, 83, 323, 1557
BstMBI	GATC	6 cut(s)	1039, 1132, 1213, 1257, 1469, 1512
BstMWI	GCNNNNNNNGC	4 cut(s)	116, 656, 737, 1347
BstNI	CCWGG	1 cut(s)	75
BstNSI	RCATGY	5 cut(s)	64, 226, 426, 770, 1317
BstSCI	CCNGG	2 cut(s)	73, 1492
BstSFI	CTRYAG	1 cut(s)	1353
BstUI	CGCG	4 cut(s)	272, 327, 572, 1350
BstV1I	GCAGC	7 cut(s)	82, 722, 922, 1093, 1190, 1339, 1408
BstV2I	GAAGAC	1 cut(s)	1351
BstZ17I	GTATAC	1 cut(s)	926
BtgI	CCRYGG	1 cut(s)	1324
BtgZI	GCGATG	1 cut(s)	287
BtsCI	GGATG	5 cut(s)	595, 731, 1288, 1502, 1555
BtsI	GCAGTG	1 cut(s)	1395
BtsIMutI	CAGTG	7 cut(s)	177, 312, 813, 909, 1089, 1092, 1395
BtuMI	TCGCGA	1 cut(s)	572
BveI	ACCTGC	2 cut(s)	320, 911
Cac8I	GCNNGC	2 cut(s)	768, 1407
CaiI	CAGNNNCTG	1 cut(s)	863
CfoI	GCGC	3 cut(s)	112, 329, 1352
Cfr13I	GGNCC	3 cut(s)	88, 643, 906
CseI	GACGC	4 cut(s)	278, 592, 677, 1356
Csp6I	GTAC	6 cut(s)	158, 166, 383, 529, 700, 1021
CspCI	CAANNNNNGTGG	6 cut(s)	103, 138, 520, 555, 898, 933
CviQI	GTAC	6 cut(s)	158, 166, 383, 529, 700, 1021
DdeI	CTNAG	4 cut(s)	101, 169, 281, 1081
DpnI	GATC	6 cut(s)	1041, 1134, 1215, 1259, 1471, 1514
DpnII	GATC	6 cut(s)	1039, 1132, 1213, 1257, 1469, 1512
DraIII	CACNNNGTG	1 cut(s)	1565
Eam1104I	CTCTTC	1 cut(s)	219
EarI	CTCTTC	1 cut(s)	219
Eco130I	CCWWGG	1 cut(s)	1324
Eco31I	GGTCTC	3 cut(s)	83, 323, 1557
Eco47I	GGWCC	3 cut(s)	88, 643, 906
Eco57I	CTGAAG	2 cut(s)	57, 840
Eco88I	CYCGRG	1 cut(s)	1620
EcoRII	CCWGG	1 cut(s)	73
EcoT14I	CCWWGG	1 cut(s)	1324
ErhI	CCWWGG	1 cut(s)	1324
FaqI	GGGAC	1 cut(s)	656
FbaI	TGATCA	1 cut(s)	1257
FblI	GTMKAC	2 cut(s)	925, 1298
Fnu4HI	GCNGC	9 cut(s)	71, 278, 711, 936, 1107, 1204, 1353, 1422, 1446
FokI	GGATG	5 cut(s)	602, 738, 1295, 1509, 1542
Fsp4HI	GCNGC	9 cut(s)	71, 278, 711, 936, 1107, 1204, 1353, 1422, 1446
FspBI	CTAG	4 cut(s)	741, 1127, 1406, 1595
GlaI	GCGC	3 cut(s)	111, 328, 1351
GluI	GCNGC	9 cut(s)	71, 278, 711, 936, 1107, 1204, 1353, 1422, 1446
GsuI	CTGGAG	1 cut(s)	1563
HapII	CCGG	3 cut(s)	723, 1076, 1494
HgaI	GACGC	4 cut(s)	278, 592, 677, 1356
HhaI	GCGC	3 cut(s)	112, 329, 1352
Hin1I	GRCGYC	1 cut(s)	989
Hin6I	GCGC	3 cut(s)	110, 327, 1350
HinP1I	GCGC	3 cut(s)	110, 327, 1350
HincII	GTYRAC	1 cut(s)	1336
HindII	GTYRAC	1 cut(s)	1336
HindIII	AAGCTT	1 cut(s)	1052
HinfI	GANTC	8 cut(s)	21, 29, 677, 797, 1079, 1363, 1393, 1598
HpaII	CCGG	3 cut(s)	723, 1076, 1494
HphI	GGTGA	4 cut(s)	251, 767, 1340, 1577
Hpy166II	GTNNAC	9 cut(s)	125, 190, 300, 603, 702, 758, 926, 1299, 1336
Hpy188I	TCNGA	3 cut(s)	28, 37, 1071
Hpy188III	TCNNGA	5 cut(s)	218, 571, 723, 1516, 1622
Hpy8I	GTNNAC	9 cut(s)	125, 190, 300, 603, 702, 758, 926, 1299, 1336
Hpy99I	CGWCG	1 cut(s)	272
HpyAV	CCTTC	4 cut(s)	226, 412, 1099, 1194
HpyCH4III	ACNGT	4 cut(s)	913, 1063, 1236, 1630
HpyCH4IV	ACGT	2 cut(s)	774, 989
HpyF10VI	GCNNNNNNNGC	4 cut(s)	116, 656, 737, 1347
HpyF3I	CTNAG	4 cut(s)	101, 169, 281, 1081
HpySE526I	ACGT	2 cut(s)	774, 989
Hsp92I	GRCGYC	1 cut(s)	989
HspAI	GCGC	3 cut(s)	110, 327, 1350
Kpn2I	TCCGGA	1 cut(s)	722
Ksp22I	TGATCA	1 cut(s)	1257
Kzo9I	GATC	6 cut(s)	1039, 1132, 1213, 1257, 1469, 1512
LguI	GCTCTTC	1 cut(s)	219
LmnI	GCTCC	1 cut(s)	1326
Lsp1109I	GCAGC	7 cut(s)	82, 722, 922, 1093, 1190, 1339, 1408
LweI	GCATC	2 cut(s)	264, 382
MaeI	CTAG	4 cut(s)	741, 1127, 1406, 1595
MaeII	ACGT	2 cut(s)	774, 989
MaeIII	GTNAC	4 cut(s)	777, 952, 1084, 1390
MalI	GATC	6 cut(s)	1041, 1134, 1215, 1259, 1471, 1514
MboI	GATC	6 cut(s)	1039, 1132, 1213, 1257, 1469, 1512
MboII	GAAGA	5 cut(s)	89, 206, 490, 1356, 1625
MfeI	CAATTG	1 cut(s)	761
MhlI	GDGCHC	2 cut(s)	214, 1254
MlyI	GAGTC	3 cut(s)	30, 1073, 1387
MnlI	CCTC	8 cut(s)	43, 337, 366, 573, 925, 1351, 1431, 1444
MroI	TCCGGA	1 cut(s)	722
MroXI	GAANNNNTTC	2 cut(s)	500, 1629
MseI	TTAA	5 cut(s)	999, 1173, 1238, 1373, 1485
MslI	CAYNNNNRTG	4 cut(s)	61, 65, 227, 1329
MspA1I	CMGCKG	1 cut(s)	280
MspI	CCGG	3 cut(s)	723, 1076, 1494
MspR9I	CCNGG	2 cut(s)	75, 1494
MunI	CAATTG	1 cut(s)	761
Mva1269I	GAATGC	1 cut(s)	675
MvaI	CCWGG	1 cut(s)	75
MvnI	CGCG	4 cut(s)	272, 327, 572, 1350
MwoI	GCNNNNNNNGC	4 cut(s)	116, 656, 737, 1347
NciI	CCSGG	1 cut(s)	1494
NcoI	CCATGG	1 cut(s)	1324
NdeII	GATC	6 cut(s)	1039, 1132, 1213, 1257, 1469, 1512
NheI	GCTAGC	1 cut(s)	1405
NlaIV	GGNNCC	4 cut(s)	90, 644, 1322, 1491
NmuCI	GTSAC	3 cut(s)	952, 1084, 1390
NruI	TCGCGA	1 cut(s)	572
NspI	RCATGY	5 cut(s)	64, 226, 426, 770, 1317
OliI	CACNNNNGTG	1 cut(s)	61
PaeI	GCATGC	1 cut(s)	770
PciI	ACATGT	2 cut(s)	60, 222
PciSI	GCTCTTC	1 cut(s)	219
PctI	GAATGC	1 cut(s)	675
PdmI	GAANNNNTTC	2 cut(s)	500, 1629
PfeI	GAWTC	5 cut(s)	29, 677, 797, 1363, 1598
PflMI	CCANNNNNTGG	1 cut(s)	880
PkrI	GCNGC	9 cut(s)	72, 279, 712, 937, 1108, 1205, 1354, 1423, 1447
PleI	GAGTC	3 cut(s)	29, 1073, 1387
PpsI	GAGTC	3 cut(s)	29, 1073, 1387
PscI	ACATGT	2 cut(s)	60, 222
PshBI	ATTAAT	1 cut(s)	999
PsiI	TTATAA	2 cut(s)	336, 824
Psp6I	CCWGG	1 cut(s)	73
PspGI	CCWGG	1 cut(s)	73
PspN4I	GGNNCC	4 cut(s)	90, 644, 1322, 1491
PspPI	GGNCC	3 cut(s)	88, 643, 906
PstI	CTGCAG	1 cut(s)	1357
PstNI	CAGNNNCTG	1 cut(s)	863
RruI	TCGCGA	1 cut(s)	572
RsaI	GTAC	6 cut(s)	159, 167, 384, 530, 701, 1022
RsaNI	GTAC	6 cut(s)	158, 166, 383, 529, 700, 1021
RseI	CAYNNNNRTG	4 cut(s)	61, 65, 227, 1329
SapI	GCTCTTC	1 cut(s)	219
SaqAI	TTAA	5 cut(s)	999, 1173, 1238, 1373, 1485
SatI	GCNGC	9 cut(s)	71, 278, 711, 936, 1107, 1204, 1353, 1422, 1446
Sau3AI	GATC	6 cut(s)	1039, 1132, 1213, 1257, 1469, 1512
Sau96I	GGNCC	3 cut(s)	88, 643, 906
SchI	GAGTC	3 cut(s)	30, 1073, 1387
ScrFI	CCNGG	2 cut(s)	75, 1494
SduI	GDGCHC	2 cut(s)	214, 1254
SfaNI	GCATC	2 cut(s)	264, 382
SfcI	CTRYAG	1 cut(s)	1353
SinI	GGWCC	3 cut(s)	88, 643, 906
SmiMI	CAYNNNNRTG	4 cut(s)	61, 65, 227, 1329
SmlI	CTYRAG	1 cut(s)	113
SmoI	CTYRAG	1 cut(s)	113
SpeI	ACTAGT	1 cut(s)	1126
SphI	GCATGC	1 cut(s)	770
SsiI	CCGC	4 cut(s)	278, 794, 1341, 1446
SspI	AATATT	1 cut(s)	356
SspMI	CTAG	4 cut(s)	741, 1127, 1406, 1595
StyD4I	CCNGG	2 cut(s)	73, 1492
StyI	CCWWGG	1 cut(s)	1324
TaaI	ACNGT	4 cut(s)	913, 1063, 1236, 1630
TaiI	ACGT	2 cut(s)	777, 992
TaqI	TCGA	2 cut(s)	267, 1225
TaqII	GACCGA	1 cut(s)	184
TatI	WGTACW	3 cut(s)	157, 528, 699
TauI	GCSGC	2 cut(s)	280, 1448
TfiI	GAWTC	5 cut(s)	29, 677, 797, 1363, 1598
Tru1I	TTAA	5 cut(s)	999, 1173, 1238, 1373, 1485
Tru9I	TTAA	5 cut(s)	999, 1173, 1238, 1373, 1485
TscAI	CASTG	7 cut(s)	177, 319, 813, 916, 1089, 1099, 1395
TseFI	GTSAC	3 cut(s)	952, 1084, 1390
TseI	GCWGC	7 cut(s)	70, 710, 935, 1106, 1203, 1352, 1421
Tsp45I	GTSAC	3 cut(s)	952, 1084, 1390
TspDTI	ATGAA	7 cut(s)	149, 245, 491, 891, 972, 1182, 1625
TspRI	CASTG	7 cut(s)	177, 319, 813, 916, 1089, 1099, 1395
Van91I	CCANNNNNTGG	1 cut(s)	880
VpaK11BI	GGWCC	3 cut(s)	88, 643, 906
VspI	ATTAAT	1 cut(s)	999
XapI	RAATTY	3 cut(s)	459, 814, 1169
XceI	RCATGY	5 cut(s)	64, 226, 426, 770, 1317
XmiI	GTMKAC	2 cut(s)	925, 1298
XmnI	GAANNNNTTC	2 cut(s)	500, 1629
XspI	CTAG	4 cut(s)	741, 1127, 1406, 1595
ZraI	GACGTC	1 cut(s)	990

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.