Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0008424

Physical Location & Seq

Genomic Coordinates Reverse (-)

8041111 .. 8043243

Gene Structure 2133 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g11350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGATTTTATCAATTAGACCTCATATTCGAAGAATATTTACAGCTTCAGCCTTCGCCCATACAGAATGCAGAAACCCTCTTCTTCCGGAGACAAAACCAGACCATCTAGAGCAGAAAACCCAATTGGGTAATGACGTAGATATGCTTGAACTCAACGCTCAATTGAAGCACCTGGTTAAAACAGGTGAAGTTGGAGACGCCCGGAACATGTTCGATAAAATGCCTCAGAGAGATGAGATTTCATGGACCAATATGATTTCAGGTTACGTTGGTGTCTCTGATCCCTCTGAGGCATTGGTTTTGTTTTCGCACATGTGGGTGCAGCCTGGAATCTGCATGGACCCCTTTGTTCTTAGTGTTGTATTAAAGGCTTGTGGACTTGGTTTGAACTTGTCTTATGGGGAAGTAATACATGGGTACTCGATAAAATCGTGTTTTGTGAATTCGGTCTTCGTGGGCAGTGCGCTTCTCGACATGTATATGAAGATTGGTAAGATTGAGCAGGGATGTAGGGTTTTTGATGAAATGCCGATAAGAAATGTGGTGTCTTGGACTACTGTTATAACCGGGCTTGTTCGTGCCGGTTACAATGTGGAGGGGTTGGAGTATTTTTCTGAAATGTGGAGGTCGAAGGTGCAGTATGACGCGTATGTGTTTGCTATCTCGTTGAAGGCGTGTGCTGATTTGAGGGCTTTGAAATATGGGAGAGCGATTCACACGCAAACAATGAAGAAGGGGTTTGATGAGAGCTCATTTGTGACGAACTCTCTTGCCACCATGTACAACAAATGTGGCAAATTAGACTATGGATTGCAATTGTTTGAAAAAATGAGGATACAGGATGTTGTTTCATGGACATCAATCATTACAACATACCTCTGGACGGGTCAAGAGGACCGTGCAATCAAAGCGTTTAAAAGAATGCAAGAAGCCGGTGTAAGTCCTAATGAATACACTTTTGCAGGCATTATCTCTGGAGTTGCCAGTCTTGCTAGAGTTGAATGGGGTGAACAATTGCATGCCCACGTTTTACACAGGGGTTTTATCTCTTCGTTGTCGGTGGGAAATTCCGTTGTGACCATGTATGCCAAATGTGGGCGTTTGGCTTCAGGTTCTAAGGTGTTTCATGAGATGAGCAGAAAAGATATTGTTTCATGGAGCGCTGTAATTGTCGGGTATTCTCAAGGAGGTTATGGGGAAGAAGCTTTTCAGTATTTGTCGTGGATGAGAAGGGATGGACCAAAACCAAATGAGTTTGCTCTTGCTAGTGTATTGAGTGTTTGTGGAAGTATGGCAATGCTTGAACAAGGGAAGCAGCTGCACGCTCATGTTGTGTCTGTCGGTTTAGAGTTTACATCTATGGTACAAAGTGCTCTAGTGAATATGTATTCGAAATGTGGAAGTATAAAAGAAGCTGCAAGGATCTTCGATGTGGCAGAACTTGACGATATTATTTCATGGACGGCAATGATTAATGGATATGCTGAACATGGGTACTACCGAGAAGCCATTGATTTGTTTGAGAAGATTCCTAGGGTTGGTCTGAAACCAGACTCGGTGACCTTCATTGGTGTTCTTGTTGCTTGTTGCCATGCTGGATTGGTTGATCTTGGTTTCCGCTACTTCAGTTCAATGAAAAATGACTTTGGGATTAATCCTGCAAAAGAACACTACGGCTGCATGATTGATCTCCTCTGTCGAGCTGGACGGTTAAGTGAGGCAGAGCATATGATCAAATGTATGCCAGTTCAACAGGATGATGTTGTTTGGTCTATTCTCCTTAGAGCTTGTAGGCTACATGGTGATGTCGACTGTGGAAGACGTGCTGCAGATGAGATCCTTAAATTGGACCCGAATTGTGCTGTGACTCACATAACCCTAGCTAACATTTATGCTGCTAAAGGAAAATGGAGGGAAGCAGCAGAAGTAAGGAAAATGATGAGATCAAAGGGGGTAATTAAGGAGCCGGGATGGTCTTGGATAAAGGTCAGGGATCGACTTTCTGCATTTGTTGCCGGAGATCAATCTCATCCACAAGCTGATGATATATACAGTGTACTGGAATTACTAGCTTCGAAGGCAGAAGATACTATGCAGGAAATTGGTTCTTCATTAATCGACGCTGAAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00051 map00051

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

711

Amino Acids

79.22

Weight (kDa)

6.39

Isoelectric Point (pI)

32.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	179 - 227	2.2e-06	PPR repeat family
PPR_2	PF13041	281 - 328	9.2e-11	PPR repeat family
PPR_3	PF13812	281 - 325	1.4e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	381 - 426	5.8e-06	PPR repeat family
PPR_2	PF13041	483 - 531	2.9e-11	PPR repeat family
PPR	PF01535	485 - 514	5.2e-07	PPR repeat
E_motif	PF20431	600 - 662	1.9e-13	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008424)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47840
fragaria_vesca	FvH4_1g12800 FvH4_2g13800
malus_domestica	MD02G1143600.v1.1 MD15G1256800.v1.1
prunus_persica	Prupe.7G158100_v2.0.a1
pyrus_communis	pycom02g11350 pycom11g12090 pycom15g22480
rosa_chinensis	RchiOBHm_Chr2g0100941
rosa_laevigata	RLG00000016992 RLG00000017027
rosa_multiflora	Rmu_sc0001659.1_g000049 Rmu_sc0001862.1_g000015
rosa_roxburghii	Rroxscaffold_2G00141730
rosa_rugosa	Rorug02G0091300 Rorug02G0093800
rosa_samantha	Rh2AG141500 Rh2BG143000 Rh2BG146700 Rh2CG147900 Rh2DG147200
rosa_wichuraiana	Rw2G011100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	563
AccI	GTMKAC	1 cut(s)	1809
AccII	CGCG	1 cut(s)	647
AccIII	TCCGGA	1 cut(s)	85
AciI	CCGC	1 cut(s)	1618
AclWI	GGATC	4 cut(s)	275, 1430, 1831, 2001
AcsI	RAATTY	2 cut(s)	442, 1066
AcuI	CTGAAG	3 cut(s)	30, 1092, 1609
AcyI	GRCGYC	1 cut(s)	198
AfaI	GTAC	5 cut(s)	419, 782, 1365, 1496, 2058
AfeI	AGCGCT	1 cut(s)	1162
AfiI	CCNNNNNNNGG	4 cut(s)	883, 1095, 1538, 1846
AflIII	ACRYGT	4 cut(s)	207, 312, 474, 645
AjiI	CACGTC	1 cut(s)	1823
AjnI	CCWGG	2 cut(s)	171, 325
AjuI	GAANNNNNNNTTGG	2 cut(s)	107, 139
Alw21I	GWGCWC	2 cut(s)	752, 1375
Alw26I	GTCTC	3 cut(s)	83, 189, 280
AlwI	GGATC	4 cut(s)	275, 1430, 1831, 2001
Aor13HI	TCCGGA	1 cut(s)	85
Aor51HI	AGCGCT	1 cut(s)	1162
ApeKI	GCWGC	8 cut(s)	322, 1315, 1318, 1415, 1677, 1826, 1895, 1919
ApoI	RAATTY	2 cut(s)	442, 1066
ArsI	GACNNNNNNTTYG	2 cut(s)	9, 41
AseI	ATTAAT	3 cut(s)	1473, 1653, 2114
Asp700I	GAANNNNTTC	2 cut(s)	209, 1206
AspA2I	CCTAGG	1 cut(s)	1532
AspLEI	GCGC	2 cut(s)	466, 1163
AspS9I	GGNCC	5 cut(s)	246, 340, 895, 1238, 1849
AsuC2I	CCSGG	3 cut(s)	202, 568, 1968
AsuHPI	GGTGA	4 cut(s)	197, 1019, 1570, 1814
AsuII	TTCGAA	3 cut(s)	28, 1391, 2075
AvaII	GGWCC	5 cut(s)	246, 340, 895, 1238, 1849
AvrII	CCTAGG	1 cut(s)	1532
BanII	GRGCYC	1 cut(s)	752
BarI	GAAGNNNNNNTAC	2 cut(s)	22, 54
BbsI	GAAGAC	2 cut(s)	442, 1825
Bbv12I	GWGCWC	2 cut(s)	752, 1375
BbvI	GCAGC	8 cut(s)	334, 1305, 1327, 1402, 1664, 1813, 1882, 1931
BccI	CCATC	3 cut(s)	111, 1229, 1965
BceAI	ACGGC	2 cut(s)	1479, 1690
BciT130I	CCWGG	2 cut(s)	173, 327
BciVI	GTATCC	1 cut(s)	828
BclI	TGATCA	1 cut(s)	1731
BcnI	CCSGG	3 cut(s)	202, 568, 1968
BcoDI	GTCTC	3 cut(s)	83, 189, 280
BfaI	CTAG	7 cut(s)	107, 993, 1266, 1376, 1533, 1880, 2069
BfmI	CTRYAG	1 cut(s)	1827
BfoI	RGCGCY	1 cut(s)	1164
BfuI	GTATCC	1 cut(s)	828
BisI	GCNGC	8 cut(s)	323, 1316, 1319, 1416, 1678, 1827, 1896, 1920
BlnI	CCTAGG	1 cut(s)	1532
BlsI	GCNGC	8 cut(s)	324, 1317, 1320, 1417, 1679, 1828, 1897, 1921
Bme1390I	CCNGG	5 cut(s)	173, 202, 327, 568, 1968
Bme18I	GGWCC	5 cut(s)	246, 340, 895, 1238, 1849
BmgBI	CACGTC	1 cut(s)	1823
BmgT120I	GGNCC	5 cut(s)	246, 340, 895, 1238, 1849
BmiI	GGNNCC	3 cut(s)	342, 1851, 1965
BmrFI	CCNGG	5 cut(s)	173, 202, 327, 568, 1968
BpiI	GAAGAC	2 cut(s)	442, 1825
BpmI	CTGGAG	1 cut(s)	996
Bpu14I	TTCGAA	3 cut(s)	28, 1391, 2075
BpuEI	CTTGAG	1 cut(s)	1167
BpuMI	CCSGG	3 cut(s)	202, 568, 1968
BsaHI	GRCGYC	1 cut(s)	198
BsaJI	CCNNGG	1 cut(s)	1532
BsaWI	WCCGGW	1 cut(s)	85
Bsc4I	CCNNNNNNNGG	4 cut(s)	883, 1095, 1538, 1846
Bse118I	RCCGGY	2 cut(s)	581, 932
Bse1I	ACTGG	3 cut(s)	984, 1745, 2064
Bse3DI	GCAATG	2 cut(s)	1302, 1473
BseAI	TCCGGA	1 cut(s)	85
BseBI	CCWGG	2 cut(s)	173, 327
BseDI	CCNNGG	1 cut(s)	1532
BseGI	GGATG	7 cut(s)	512, 847, 1230, 1240, 1762, 1976, 2029
BseLI	CCNNNNNNNGG	4 cut(s)	883, 1095, 1538, 1846
BseMI	GCAATG	2 cut(s)	1302, 1473
BseMII	CTCAG	2 cut(s)	239, 279
BseNI	ACTGG	3 cut(s)	984, 1745, 2064
BseRI	GAGGAG	1 cut(s)	1682
BseXI	GCAGC	8 cut(s)	334, 1305, 1327, 1402, 1664, 1813, 1882, 1931
BsgI	GTGCAG	3 cut(s)	341, 656, 1304
Bsh1236I	CGCG	1 cut(s)	647
BsiHKAI	GWGCWC	2 cut(s)	752, 1375
BsiSI	CCGG	7 cut(s)	86, 202, 567, 582, 933, 1967, 2016
BslI	CCNNNNNNNGG	4 cut(s)	883, 1095, 1538, 1846
BsmAI	GTCTC	3 cut(s)	83, 189, 280
BsmBI	CGTCTC	1 cut(s)	189
BsmI	GAATGC	2 cut(s)	71, 927
Bsp119I	TTCGAA	3 cut(s)	28, 1391, 2075
Bsp1286I	GDGCHC	2 cut(s)	752, 1375
Bsp13I	TCCGGA	1 cut(s)	85
Bsp1407I	TGTACA	1 cut(s)	780
Bsp143I	GATC	9 cut(s)	280, 1422, 1606, 1687, 1731, 1836, 1943, 1993, 2020
BspACI	CCGC	1 cut(s)	1618
BspCNI	CTCAG	2 cut(s)	238, 280
BspEI	TCCGGA	1 cut(s)	85
BspFNI	CGCG	1 cut(s)	647
BspHI	TCATGA	1 cut(s)	1126
BspLI	GGNNCC	3 cut(s)	342, 1851, 1965
BspMAI	CTGCAG	1 cut(s)	1831
BspPI	GGATC	4 cut(s)	275, 1430, 1831, 2001
BspT104I	TTCGAA	3 cut(s)	28, 1391, 2075
BsrDI	GCAATG	2 cut(s)	1302, 1473
BsrFI	RCCGGY	2 cut(s)	581, 932
BsrGI	TGTACA	1 cut(s)	780
BsrI	ACTGG	3 cut(s)	984, 1745, 2064
BssAI	RCCGGY	2 cut(s)	581, 932
BssECI	CCNNGG	1 cut(s)	1532
BssMI	GATC	9 cut(s)	280, 1422, 1606, 1687, 1731, 1836, 1943, 1993, 2020
BssNI	GRCGYC	1 cut(s)	198
BssT1I	CCWWGG	1 cut(s)	1532
Bst2UI	CCWGG	2 cut(s)	173, 327
Bst4CI	ACNGT	5 cut(s)	559, 899, 1710, 1814, 2054
Bst6I	CTCTTC	2 cut(s)	84, 1054
BstACI	GRCGYC	1 cut(s)	198
BstAPI	GCANNNNNTGC	1 cut(s)	2012
BstAUI	TGTACA	1 cut(s)	780
BstBI	TTCGAA	3 cut(s)	28, 1391, 2075
BstC8I	GCNNGC	3 cut(s)	964, 1020, 1323
BstDEI	CTNAG	5 cut(s)	225, 288, 353, 1116, 1781
BstEII	GGTNACC	1 cut(s)	1558
BstF5I	GGATG	7 cut(s)	512, 847, 1230, 1240, 1762, 1976, 2029
BstFNI	CGCG	1 cut(s)	647
BstH2I	RGCGCY	1 cut(s)	1164
BstHHI	GCGC	2 cut(s)	466, 1163
BstKTI	GATC	9 cut(s)	283, 1425, 1609, 1690, 1734, 1839, 1946, 1996, 2023
BstMAI	GTCTC	3 cut(s)	83, 189, 280
BstMBI	GATC	9 cut(s)	280, 1422, 1606, 1687, 1731, 1836, 1943, 1993, 2020
BstMWI	GCNNNNNNNGC	4 cut(s)	908, 989, 2012, 2078
BstNI	CCWGG	2 cut(s)	173, 327
BstNSI	RCATGY	4 cut(s)	211, 316, 478, 1022
BstPI	GGTNACC	1 cut(s)	1558
BstSCI	CCNGG	5 cut(s)	171, 200, 325, 566, 1966
BstSFI	CTRYAG	1 cut(s)	1827
BstUI	CGCG	1 cut(s)	647
BstV1I	GCAGC	8 cut(s)	334, 1305, 1327, 1402, 1664, 1813, 1882, 1931
BstV2I	GAAGAC	2 cut(s)	442, 1825
BstX2I	RGATCY	2 cut(s)	1422, 1836
BstYI	RGATCY	2 cut(s)	1422, 1836
BsuI	GTATCC	1 cut(s)	828
BtrI	CACGTC	1 cut(s)	1823
BtsCI	GGATG	7 cut(s)	512, 847, 1230, 1240, 1762, 1976, 2029
BtsI	GCAGTG	1 cut(s)	466
BtsIMutI	CAGTG	2 cut(s)	466, 2059
Cac8I	GCNNGC	3 cut(s)	964, 1020, 1323
CciI	TCATGA	1 cut(s)	1126
CfoI	GCGC	2 cut(s)	466, 1163
Cfr10I	RCCGGY	2 cut(s)	581, 932
Cfr13I	GGNCC	5 cut(s)	246, 340, 895, 1238, 1849
CseI	GACGC	2 cut(s)	206, 653
CsiI	ACCWGGT	1 cut(s)	171
Csp6I	GTAC	5 cut(s)	418, 781, 1364, 1495, 2057
CspCI	CAANNNNNGTGG	2 cut(s)	772, 807
CviQI	GTAC	5 cut(s)	418, 781, 1364, 1495, 2057
DdeI	CTNAG	5 cut(s)	225, 288, 353, 1116, 1781
DpnI	GATC	9 cut(s)	282, 1424, 1608, 1689, 1733, 1838, 1945, 1995, 2022
DpnII	GATC	9 cut(s)	280, 1422, 1606, 1687, 1731, 1836, 1943, 1993, 2020
DraI	TTTAAA	1 cut(s)	916
Eam1104I	CTCTTC	2 cut(s)	84, 1054
EarI	CTCTTC	2 cut(s)	84, 1054
Ecl136II	GAGCTC	1 cut(s)	750
Eco130I	CCWWGG	1 cut(s)	1532
Eco24I	GRGCYC	1 cut(s)	752
Eco47I	GGWCC	5 cut(s)	246, 340, 895, 1238, 1849
Eco47III	AGCGCT	1 cut(s)	1162
Eco53kI	GAGCTC	1 cut(s)	750
Eco57I	CTGAAG	3 cut(s)	30, 1092, 1609
Eco91I	GGTNACC	1 cut(s)	1558
EcoICRI	GAGCTC	1 cut(s)	750
EcoO65I	GGTNACC	1 cut(s)	1558
EcoRI	GAATTC	1 cut(s)	442
EcoRII	CCWGG	2 cut(s)	171, 325
EcoT14I	CCWWGG	1 cut(s)	1532
EcoT38I	GRGCYC	1 cut(s)	752
ErhI	CCWWGG	1 cut(s)	1532
Esp3I	CGTCTC	1 cut(s)	189
FauNDI	CATATG	1 cut(s)	1728
FbaI	TGATCA	1 cut(s)	1731
FblI	GTMKAC	1 cut(s)	1809
Fnu4HI	GCNGC	8 cut(s)	323, 1316, 1319, 1416, 1678, 1827, 1896, 1920
FokI	GGATG	7 cut(s)	519, 854, 1237, 1247, 1769, 1983, 2016
FriOI	GRGCYC	1 cut(s)	752
Fsp4HI	GCNGC	8 cut(s)	323, 1316, 1319, 1416, 1678, 1827, 1896, 1920
FspBI	CTAG	7 cut(s)	107, 993, 1266, 1376, 1533, 1880, 2069
GlaI	GCGC	2 cut(s)	465, 1162
GluI	GCNGC	8 cut(s)	323, 1316, 1319, 1416, 1678, 1827, 1896, 1920
GsuI	CTGGAG	1 cut(s)	996
HaeII	RGCGCY	1 cut(s)	1164
HapII	CCGG	7 cut(s)	86, 202, 567, 582, 933, 1967, 2016
HgaI	GACGC	2 cut(s)	206, 653
HhaI	GCGC	2 cut(s)	466, 1163
Hin1I	GRCGYC	1 cut(s)	198
Hin6I	GCGC	2 cut(s)	464, 1161
HinP1I	GCGC	2 cut(s)	464, 1161
HincII	GTYRAC	1 cut(s)	1810
HindII	GTYRAC	1 cut(s)	1810
HindIII	AAGCTT	1 cut(s)	1203
HinfI	GANTC	5 cut(s)	330, 712, 1528, 1553, 1867
HpaII	CCGG	7 cut(s)	86, 202, 567, 582, 933, 1967, 2016
HphI	GGTGA	4 cut(s)	197, 1019, 1570, 1814
Hpy166II	GTNNAC	5 cut(s)	377, 1010, 1353, 1810, 2057
Hpy188I	TCNGA	5 cut(s)	228, 280, 289, 616, 1545
Hpy188III	TCNNGA	7 cut(s)	86, 107, 470, 880, 890, 975, 1127
Hpy8I	GTNNAC	5 cut(s)	377, 1010, 1353, 1810, 2057
Hpy99I	CGWCG	1 cut(s)	2123
HpyAV	CCTTC	7 cut(s)	61, 625, 664, 727, 1224, 1573, 2071
HpyCH4III	ACNGT	5 cut(s)	559, 899, 1710, 1814, 2054
HpyCH4IV	ACGT	4 cut(s)	135, 267, 1026, 1822
HpyF10VI	GCNNNNNNNGC	4 cut(s)	908, 989, 2012, 2078
HpyF3I	CTNAG	5 cut(s)	225, 288, 353, 1116, 1781
HpySE526I	ACGT	4 cut(s)	135, 267, 1026, 1822
Hsp92I	GRCGYC	1 cut(s)	198
HspAI	GCGC	2 cut(s)	464, 1161
Kpn2I	TCCGGA	1 cut(s)	85
Ksp22I	TGATCA	1 cut(s)	1731
Kzo9I	GATC	9 cut(s)	280, 1422, 1606, 1687, 1731, 1836, 1943, 1993, 2020
LmnI	GCTCC	2 cut(s)	1158, 1963
Lsp1109I	GCAGC	8 cut(s)	334, 1305, 1327, 1402, 1664, 1813, 1882, 1931
MabI	ACCWGGT	1 cut(s)	171
MaeI	CTAG	7 cut(s)	107, 993, 1266, 1376, 1533, 1880, 2069
MaeII	ACGT	4 cut(s)	135, 267, 1026, 1822
MaeIII	GTNAC	6 cut(s)	263, 584, 757, 1075, 1558, 1864
MalI	GATC	9 cut(s)	282, 1424, 1608, 1689, 1733, 1838, 1945, 1995, 2022
MboI	GATC	9 cut(s)	280, 1422, 1606, 1687, 1731, 1836, 1943, 1993, 2020
MfeI	CAATTG	4 cut(s)	122, 161, 815, 1013
MflI	RGATCY	2 cut(s)	1422, 1836
MhlI	GDGCHC	2 cut(s)	752, 1375
MluI	ACGCGT	1 cut(s)	645
MlyI	GAGTC	2 cut(s)	1547, 1861
MmeI	TCCRAC	2 cut(s)	172, 582
MroI	TCCGGA	1 cut(s)	85
MroXI	GAANNNNTTC	2 cut(s)	209, 1206
MseI	TTAA	9 cut(s)	177, 365, 915, 1473, 1653, 1712, 1842, 1959, 2114
MslI	CAYNNNNRTG	4 cut(s)	317, 479, 1326, 1803
MspA1I	CMGCKG	1 cut(s)	1318
MspI	CCGG	7 cut(s)	86, 202, 567, 582, 933, 1967, 2016
MspR9I	CCNGG	5 cut(s)	173, 202, 327, 568, 1968
MunI	CAATTG	4 cut(s)	122, 161, 815, 1013
Mva1269I	GAATGC	2 cut(s)	71, 927
MvaI	CCWGG	2 cut(s)	173, 327
MvnI	CGCG	1 cut(s)	647
MwoI	GCNNNNNNNGC	4 cut(s)	908, 989, 2012, 2078
NciI	CCSGG	3 cut(s)	202, 568, 1968
NdeI	CATATG	1 cut(s)	1728
NdeII	GATC	9 cut(s)	280, 1422, 1606, 1687, 1731, 1836, 1943, 1993, 2020
NlaIV	GGNNCC	3 cut(s)	342, 1851, 1965
NmuCI	GTSAC	4 cut(s)	757, 1075, 1558, 1864
NspI	RCATGY	4 cut(s)	211, 316, 478, 1022
NspV	TTCGAA	3 cut(s)	28, 1391, 2075
PaeI	GCATGC	1 cut(s)	1022
PagI	TCATGA	1 cut(s)	1126
PciI	ACATGT	3 cut(s)	207, 312, 474
PcsI	WCGNNNNNNNCGW	2 cut(s)	428, 671
PctI	GAATGC	2 cut(s)	71, 927
PdmI	GAANNNNTTC	2 cut(s)	209, 1206
PfeI	GAWTC	3 cut(s)	330, 712, 1528
PkrI	GCNGC	8 cut(s)	324, 1317, 1320, 1417, 1679, 1828, 1897, 1921
PleI	GAGTC	2 cut(s)	1547, 1861
PpsI	GAGTC	2 cut(s)	1547, 1861
PscI	ACATGT	3 cut(s)	207, 312, 474
PshBI	ATTAAT	3 cut(s)	1473, 1653, 2114
PsiI	TTATAA	1 cut(s)	563
Psp124BI	GAGCTC	1 cut(s)	752
Psp6I	CCWGG	2 cut(s)	171, 325
PspEI	GGTNACC	1 cut(s)	1558
PspGI	CCWGG	2 cut(s)	171, 325
PspN4I	GGNNCC	3 cut(s)	342, 1851, 1965
PspPI	GGNCC	5 cut(s)	246, 340, 895, 1238, 1849
PstI	CTGCAG	1 cut(s)	1831
PsuI	RGATCY	2 cut(s)	1422, 1836
PvuII	CAGCTG	1 cut(s)	1318
RsaI	GTAC	5 cut(s)	419, 782, 1365, 1496, 2058
RsaNI	GTAC	5 cut(s)	418, 781, 1364, 1495, 2057
RseI	CAYNNNNRTG	4 cut(s)	317, 479, 1326, 1803
SacI	GAGCTC	1 cut(s)	752
SalI	GTCGAC	1 cut(s)	1808
SaqAI	TTAA	9 cut(s)	177, 365, 915, 1473, 1653, 1712, 1842, 1959, 2114
SatI	GCNGC	8 cut(s)	323, 1316, 1319, 1416, 1678, 1827, 1896, 1920
Sau3AI	GATC	9 cut(s)	280, 1422, 1606, 1687, 1731, 1836, 1943, 1993, 2020
Sau96I	GGNCC	5 cut(s)	246, 340, 895, 1238, 1849
SchI	GAGTC	2 cut(s)	1547, 1861
ScrFI	CCNGG	5 cut(s)	173, 202, 327, 568, 1968
SduI	GDGCHC	2 cut(s)	752, 1375
SexAI	ACCWGGT	1 cut(s)	171
SfcI	CTRYAG	1 cut(s)	1827
SfuI	TTCGAA	3 cut(s)	28, 1391, 2075
SinI	GGWCC	5 cut(s)	246, 340, 895, 1238, 1849
SmiMI	CAYNNNNRTG	4 cut(s)	317, 479, 1326, 1803
SmlI	CTYRAG	1 cut(s)	1182
SmoI	CTYRAG	1 cut(s)	1182
SphI	GCATGC	1 cut(s)	1022
SsiI	CCGC	1 cut(s)	1618
SspI	AATATT	1 cut(s)	36
SspMI	CTAG	7 cut(s)	107, 993, 1266, 1376, 1533, 1880, 2069
SstI	GAGCTC	1 cut(s)	752
StyD4I	CCNGG	5 cut(s)	171, 200, 325, 566, 1966
StyI	CCWWGG	1 cut(s)	1532
TaaI	ACNGT	5 cut(s)	559, 899, 1710, 1814, 2054
TaiI	ACGT	4 cut(s)	138, 270, 1029, 1825
TaqII	GACCGA	1 cut(s)	436
TatI	WGTACW	2 cut(s)	780, 2056
TfiI	GAWTC	3 cut(s)	330, 712, 1528
Tru1I	TTAA	9 cut(s)	177, 365, 915, 1473, 1653, 1712, 1842, 1959, 2114
Tru9I	TTAA	9 cut(s)	177, 365, 915, 1473, 1653, 1712, 1842, 1959, 2114
TscAI	CASTG	2 cut(s)	466, 2059
TseFI	GTSAC	4 cut(s)	757, 1075, 1558, 1864
TseI	GCWGC	8 cut(s)	322, 1315, 1318, 1415, 1677, 1826, 1895, 1919
Tsp45I	GTSAC	4 cut(s)	757, 1075, 1558, 1864
TspGWI	ACGGA	1 cut(s)	1060
TspRI	CASTG	2 cut(s)	466, 2059
VpaK11BI	GGWCC	5 cut(s)	246, 340, 895, 1238, 1849
VspI	ATTAAT	3 cut(s)	1473, 1653, 2114
XapI	RAATTY	2 cut(s)	442, 1066
XbaI	TCTAGA	1 cut(s)	106
XceI	RCATGY	4 cut(s)	211, 316, 478, 1022
XmaJI	CCTAGG	1 cut(s)	1532
XmiI	GTMKAC	1 cut(s)	1809
XmnI	GAANNNNTTC	2 cut(s)	209, 1206
XspI	CTAG	7 cut(s)	107, 993, 1266, 1376, 1533, 1880, 2069

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.