Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0008424

Physical Location & Seq

Genomic Coordinates Reverse (-)

12643543 .. 12645351

Gene Structure 1809 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG146700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGTGGGTGCAGCCAGGTCTCTGCATGGACCCCTTTCTTCTCAGCATTGCGCTCAAGGCTTGTGGACTTGGAAGGAACTTGTCTTATGGGGAAGTTGTACATGGGTACTCGGTGAAATCGGGTTTTGTGAACTCAGTCTTTGTGGGAAGTGCTCTTCTTGACATGTATATGAAGGTTGGTGAGATTGGCAAGGGTTGTAGAGTTTTCGACGCAATGCCGCTGAGAAATGTGGTGTCGTGGACTACCATTATCACTGGTCTCGTTCGCGCAGGTTATAATGTGGAGGGGTTGCGATATTTTGCTGAAATGTGGAGGTGTAGGGTGCAATGTGATGCGTATGCGTTTGCTATCTCGTTGAAGGCGTGTGCTGATTTGGGTGCTTTGAAGTGTGGGAGAGAAATTCACACGCAAACGATGAAGAAAGGGTTTGATGAGAACTCTTTCGTAGCCAACTCTCTTGCTACCATGTACAATAAATGTGGAAAATTGGACTATGGGGTGCAGTTGTTCGCGAACATGAGGACGCAGGATGTTGTTTCGTGGACATCAATCATTACATCGTATTTTTGGACGGGTCAAGAGGACCATGCAATCAAAGCATTTATGCGAATGCAGGAATCTGGTGTGCATCCTAATGAATACACTTTTGCAGCCGTTATCTCCGGATGTGCCAATCTTGCTAGAGTTGAATGGGGTGAACAATTGCATGCCAACGTGTTACGCTTGGGTCTTGCGGATTCTTTGTCAGTGGGAAATTCAGTTATAGCCATGTATGCTAAATGTGGGCGTTTGGCTTCAGCTTCTGTTGTGTTTCATGAGATGGGCAGAAAAGATATTGTTTCATGGACCACTGTAATTGCAGGGTATTCTCAAGCAGGTTATGGGGAAGAAGCTTTCAAGTATTTGTCGTGGATGAGAAGGGAAGAACCAAAACCAAACGAGTATGCTTTTGCTAGTGTTTTAAGTGTTTGTGGAAGCATGGCAATGCTTGAGCAAGGCAAGCAATTGCATGCTCATGTCCTAACGGTAGGTCTAGATTCTGAAGCTATGGTACAAAGTGCCTTAGTCAATCTGTACTCGAAATGTGGAAGTATACAAGAGGCTGCAAAAATCTTTAATGTGACAAAAGCAAAAGATGATGATGTTATTTCATGGACGTCCATGATTAATGGATATGCTCAACATGGGTACTACCACGAAGCCATTGATCTGTTTGAGAAGCTTCCTACGGTTGGTCTGAAACCGGACTCAGTGACCTTCATTGGTGTTCTTGCTGCGTGTAGCCATGCTGGACTAGTTGATCTTGGTTTCCACTACTTCAATTCAATGAGCAATGAATTTAAGATTAGTCCTTCAAAAGAACACTACGGCTGCATGATTGATCTCCTTTGTCGAGCTGGACGGTTAAGTGAAGCAGAGCACATGATCAAAAGTATGCCAGTTCAACAGGATGATGTTGTCTGGTCTACTCTACTTACAGCATGTCGGCTCCATGGCGATGTTGACTGCGGAAGACACGCTGCAGAGGAGATTCTTAAATTAAATCCTAATTGTGCAGTAACTCACATAACGCTGGCTGGTATTTATGCTGCCAAAGGAATGTGGAGGGAAGCCGCAGAGGTAAGGAGAATGATGAGATCAAAGGGCGTAATTAAGGAACCCGGATGGTCTGGGATAGAGGTCAAGAATGGGATTTCTGTGTTTGTTGCTGGAGATAGGTCTCATCCACAAGGTGATGAGATATATAGTGTGCTGGAATTACTAGATTCAAAGGCAGAGATTTCTACTCGGGAAACAGTTCTTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00051 map00051

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

602

Amino Acids

66.38

Weight (kDa)

6.45

Isoelectric Point (pI)

30.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	75 - 123	5.6e-07	PPR repeat family
PPR_2	PF13041	177 - 225	4.4e-12	PPR repeat family
PPR_3	PF13812	177 - 223	1.6e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	277 - 324	2e-09	PPR repeat family
PPR_2	PF13041	381 - 428	2.9e-10	PPR repeat family
PPR	PF01535	383 - 409	1.6e-07	PPR repeat
E_motif	PF20431	498 - 560	2.9e-10	E motif
Eplus_motif	PF20430	568 - 586	5.1e-06	E+ motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0008424)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47840
fragaria_vesca	FvH4_1g12800 FvH4_2g13800
malus_domestica	MD02G1143600.v1.1 MD15G1256800.v1.1
prunus_persica	Prupe.7G158100_v2.0.a1
pyrus_communis	pycom02g11350 pycom11g12090 pycom15g22480
rosa_chinensis	RchiOBHm_Chr2g0100941
rosa_laevigata	RLG00000016992 RLG00000017027
rosa_multiflora	Rmu_sc0001659.1_g000049 Rmu_sc0001862.1_g000015
rosa_roxburghii	Rroxscaffold_2G00141730
rosa_rugosa	Rorug02G0091300 Rorug02G0093800
rosa_samantha	Rh2AG141500 Rh2BG143000 Rh2BG146700 Rh2CG147900 Rh2DG147200
rosa_wichuraiana	Rw2G011100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	276
AatII	GACGTC	1 cut(s)	1160
Acc36I	ACCTGC	2 cut(s)	260, 866
AccI	GTMKAC	2 cut(s)	1093, 1466
AccII	CGCG	2 cut(s)	267, 512
AccIII	TCCGGA	1 cut(s)	662
AciI	CCGC	4 cut(s)	218, 734, 1509, 1614
AcsI	RAATTY	3 cut(s)	399, 754, 1337
AcuI	CTGAAG	2 cut(s)	780, 1062
AcyI	GRCGYC	1 cut(s)	1157
AdeI	CACNNNGTG	1 cut(s)	1733
AfaI	GTAC	6 cut(s)	99, 107, 470, 1053, 1076, 1190
AfiI	CCNNNNNNNGG	1 cut(s)	1232
AflIII	ACRYGT	2 cut(s)	162, 714
AgsI	TTSAA	9 cut(s)	358, 385, 689, 898, 1321, 1326, 1356, 1445, 1770
AhlI	ACTAGT	1 cut(s)	1294
AjnI	CCWGG	1 cut(s)	13
AluBI	AGCT	5 cut(s)	800, 893, 1046, 1222, 1397
AluI	AGCT	5 cut(s)	800, 893, 1046, 1222, 1397
Alw21I	GWGCWC	2 cut(s)	154, 1422
Alw26I	GTCTC	3 cut(s)	23, 263, 1725
AlwNI	CAGNNNCTG	1 cut(s)	803
Ama87I	CYCGRG	1 cut(s)	1788
Aor13HI	TCCGGA	1 cut(s)	662
ApeKI	GCWGC	7 cut(s)	10, 650, 1103, 1274, 1371, 1520, 1589
ApoI	RAATTY	3 cut(s)	399, 754, 1337
AseI	ATTAAT	1 cut(s)	1167
Asp700I	GAANNNNTTC	2 cut(s)	440, 1797
AspLEI	GCGC	2 cut(s)	52, 269
AspS9I	GGNCC	3 cut(s)	28, 583, 846
AsuC2I	CCSGG	1 cut(s)	1662
AsuHPI	GGTGA	4 cut(s)	124, 191, 707, 1745
AvaI	CYCGRG	1 cut(s)	1788
AvaII	GGWCC	3 cut(s)	28, 583, 846
BarI	GAAGNNNNNNTAC	2 cut(s)	1035, 1067
BbsI	GAAGAC	1 cut(s)	1519
Bbv12I	GWGCWC	2 cut(s)	154, 1422
BbvI	GCAGC	7 cut(s)	22, 662, 1090, 1261, 1358, 1507, 1576
BccI	CCATC	2 cut(s)	814, 1659
BceAI	ACGGC	2 cut(s)	638, 1384
BciT130I	CCWGG	1 cut(s)	15
BclI	TGATCA	1 cut(s)	1425
BcnI	CCSGG	1 cut(s)	1662
BcoDI	GTCTC	3 cut(s)	23, 263, 1725
BcuI	ACTAGT	1 cut(s)	1294
BfaI	CTAG	5 cut(s)	681, 954, 1034, 1295, 1763
BfmI	CTRYAG	1 cut(s)	1521
BfuAI	ACCTGC	2 cut(s)	260, 866
BisI	GCNGC	9 cut(s)	11, 218, 651, 1104, 1275, 1372, 1521, 1590, 1614
BlsI	GCNGC	9 cut(s)	12, 219, 652, 1105, 1276, 1373, 1522, 1591, 1615
Bme1390I	CCNGG	2 cut(s)	15, 1662
Bme18I	GGWCC	3 cut(s)	28, 583, 846
BmeT110I	CYCGRG	1 cut(s)	1788
BmgT120I	GGNCC	3 cut(s)	28, 583, 846
BmiI	GGNNCC	3 cut(s)	30, 1490, 1659
BmrFI	CCNGG	2 cut(s)	15, 1662
BmsI	GCATC	2 cut(s)	322, 637
BpiI	GAAGAC	1 cut(s)	1519
BpmI	CTGGAG	1 cut(s)	1731
BpuEI	CTTGAG	3 cut(s)	38, 855, 1010
BpuMI	CCSGG	1 cut(s)	1662
BsaHI	GRCGYC	1 cut(s)	1157
BsaI	GGTCTC	3 cut(s)	23, 263, 1725
BsaJI	CCNNGG	1 cut(s)	1492
BsaWI	WCCGGW	2 cut(s)	662, 1243
Bsc4I	CCNNNNNNNGG	1 cut(s)	1232
Bse1I	ACTGG	2 cut(s)	259, 1439
Bse3DI	GCAATG	5 cut(s)	45, 219, 332, 990, 1339
BseAI	TCCGGA	1 cut(s)	662
BseBI	CCWGG	1 cut(s)	15
BseDI	CCNNGG	1 cut(s)	1492
BseGI	GGATG	7 cut(s)	535, 628, 671, 918, 1456, 1670, 1723
BseLI	CCNNNNNNNGG	1 cut(s)	1232
BseMI	GCAATG	5 cut(s)	45, 219, 332, 990, 1339
BseMII	CTCAG	4 cut(s)	55, 147, 212, 1263
BseNI	ACTGG	2 cut(s)	259, 1439
BseRI	GAGGAG	1 cut(s)	1541
BseXI	GCAGC	7 cut(s)	22, 662, 1090, 1261, 1358, 1507, 1576
BsgI	GTGCAG	3 cut(s)	29, 521, 1575
Bsh1236I	CGCG	2 cut(s)	267, 512
BsiHKAI	GWGCWC	2 cut(s)	154, 1422
BsiHKCI	CYCGRG	1 cut(s)	1788
BsiSI	CCGG	3 cut(s)	663, 1244, 1662
BslI	CCNNNNNNNGG	1 cut(s)	1232
BsmAI	GTCTC	3 cut(s)	23, 263, 1725
BsmI	GAATGC	1 cut(s)	615
Bso31I	GGTCTC	3 cut(s)	23, 263, 1725
BsoBI	CYCGRG	1 cut(s)	1788
Bsp1286I	GDGCHC	2 cut(s)	154, 1422
Bsp13I	TCCGGA	1 cut(s)	662
Bsp1407I	TGTACA	2 cut(s)	97, 468
Bsp143I	GATC	5 cut(s)	1207, 1300, 1381, 1425, 1637
Bsp19I	CCATGG	1 cut(s)	1492
Bsp68I	TCGCGA	1 cut(s)	512
BspACI	CCGC	4 cut(s)	218, 734, 1509, 1614
BspCNI	CTCAG	4 cut(s)	54, 146, 213, 1262
BspEI	TCCGGA	1 cut(s)	662
BspFNI	CGCG	2 cut(s)	267, 512
BspHI	TCATGA	1 cut(s)	814
BspLI	GGNNCC	3 cut(s)	30, 1490, 1659
BspMAI	CTGCAG	1 cut(s)	1525
BspMI	ACCTGC	2 cut(s)	260, 866
BspQI	GCTCTTC	1 cut(s)	159
BspTNI	GGTCTC	3 cut(s)	23, 263, 1725
BsrDI	GCAATG	5 cut(s)	45, 219, 332, 990, 1339
BsrGI	TGTACA	2 cut(s)	97, 468
BsrI	ACTGG	2 cut(s)	259, 1439
BssECI	CCNNGG	1 cut(s)	1492
BssMI	GATC	5 cut(s)	1207, 1300, 1381, 1425, 1637
BssNAI	GTATAC	1 cut(s)	1094
BssNI	GRCGYC	1 cut(s)	1157
BssT1I	CCWWGG	1 cut(s)	1492
Bst1107I	GTATAC	1 cut(s)	1094
Bst2UI	CCWGG	1 cut(s)	15
Bst4CI	ACNGT	5 cut(s)	853, 1027, 1231, 1404, 1798
Bst6I	CTCTTC	1 cut(s)	159
BstACI	GRCGYC	1 cut(s)	1157
BstAUI	TGTACA	2 cut(s)	97, 468
BstC8I	GCNNGC	4 cut(s)	708, 1001, 1011, 1575
BstDEI	CTNAG	5 cut(s)	41, 133, 221, 1063, 1249
BstDSI	CCRYGG	1 cut(s)	1492
BstF5I	GGATG	7 cut(s)	535, 628, 671, 918, 1456, 1670, 1723
BstFNI	CGCG	2 cut(s)	267, 512
BstHHI	GCGC	2 cut(s)	52, 269
BstKTI	GATC	5 cut(s)	1210, 1303, 1384, 1428, 1640
BstMAI	GTCTC	3 cut(s)	23, 263, 1725
BstMBI	GATC	5 cut(s)	1207, 1300, 1381, 1425, 1637
BstMWI	GCNNNNNNNGC	5 cut(s)	56, 596, 677, 773, 1000
BstNI	CCWGG	1 cut(s)	15
BstNSI	RCATGY	4 cut(s)	166, 710, 1013, 1485
BstSCI	CCNGG	2 cut(s)	13, 1660
BstSFI	CTRYAG	1 cut(s)	1521
BstUI	CGCG	2 cut(s)	267, 512
BstV1I	GCAGC	7 cut(s)	22, 662, 1090, 1261, 1358, 1507, 1576
BstV2I	GAAGAC	1 cut(s)	1519
BstZ17I	GTATAC	1 cut(s)	1094
BtgI	CCRYGG	1 cut(s)	1492
BtgZI	GCGATG	1 cut(s)	1512
BtsCI	GGATG	7 cut(s)	535, 628, 671, 918, 1456, 1670, 1723
BtsIMutI	CAGTG	4 cut(s)	252, 753, 849, 1257
BtuMI	TCGCGA	1 cut(s)	512
BveI	ACCTGC	2 cut(s)	260, 866
Cac8I	GCNNGC	4 cut(s)	708, 1001, 1011, 1575
CaiI	CAGNNNCTG	1 cut(s)	803
CciI	TCATGA	1 cut(s)	814
CfoI	GCGC	2 cut(s)	52, 269
Cfr13I	GGNCC	3 cut(s)	28, 583, 846
CseI	GACGC	2 cut(s)	218, 532
Csp6I	GTAC	6 cut(s)	98, 106, 469, 1052, 1075, 1189
CspCI	CAANNNNNGTGG	6 cut(s)	43, 78, 460, 495, 838, 873
CviQI	GTAC	6 cut(s)	98, 106, 469, 1052, 1075, 1189
DdeI	CTNAG	5 cut(s)	41, 133, 221, 1063, 1249
DpnI	GATC	5 cut(s)	1209, 1302, 1383, 1427, 1639
DpnII	GATC	5 cut(s)	1207, 1300, 1381, 1425, 1637
DraIII	CACNNNGTG	1 cut(s)	1733
Eam1104I	CTCTTC	1 cut(s)	159
EarI	CTCTTC	1 cut(s)	159
Eco130I	CCWWGG	1 cut(s)	1492
Eco31I	GGTCTC	3 cut(s)	23, 263, 1725
Eco47I	GGWCC	3 cut(s)	28, 583, 846
Eco57I	CTGAAG	2 cut(s)	780, 1062
Eco88I	CYCGRG	1 cut(s)	1788
EcoRII	CCWGG	1 cut(s)	13
EcoT14I	CCWWGG	1 cut(s)	1492
ErhI	CCWWGG	1 cut(s)	1492
FbaI	TGATCA	1 cut(s)	1425
FblI	GTMKAC	2 cut(s)	1093, 1466
Fnu4HI	GCNGC	9 cut(s)	11, 218, 651, 1104, 1275, 1372, 1521, 1590, 1614
FokI	GGATG	7 cut(s)	542, 615, 678, 925, 1463, 1677, 1710
Fsp4HI	GCNGC	9 cut(s)	11, 218, 651, 1104, 1275, 1372, 1521, 1590, 1614
FspBI	CTAG	5 cut(s)	681, 954, 1034, 1295, 1763
GlaI	GCGC	2 cut(s)	51, 268
GluI	GCNGC	9 cut(s)	11, 218, 651, 1104, 1275, 1372, 1521, 1590, 1614
GsuI	CTGGAG	1 cut(s)	1731
HapII	CCGG	3 cut(s)	663, 1244, 1662
HgaI	GACGC	2 cut(s)	218, 532
HhaI	GCGC	2 cut(s)	52, 269
Hin1I	GRCGYC	1 cut(s)	1157
Hin6I	GCGC	2 cut(s)	50, 267
HinP1I	GCGC	2 cut(s)	50, 267
HincII	GTYRAC	1 cut(s)	1504
HindII	GTYRAC	1 cut(s)	1504
HindIII	AAGCTT	2 cut(s)	891, 1220
HinfI	GANTC	6 cut(s)	617, 737, 1037, 1247, 1531, 1766
HpaII	CCGG	3 cut(s)	663, 1244, 1662
HphI	GGTGA	4 cut(s)	124, 191, 707, 1745
Hpy166II	GTNNAC	8 cut(s)	65, 130, 240, 543, 698, 1094, 1467, 1504
Hpy188I	TCNGA	2 cut(s)	1042, 1239
Hpy188III	TCNNGA	8 cut(s)	158, 511, 578, 663, 815, 1034, 1684, 1790
Hpy8I	GTNNAC	8 cut(s)	65, 130, 240, 543, 698, 1094, 1467, 1504
Hpy99I	CGWCG	1 cut(s)	212
HpyAV	CCTTC	6 cut(s)	66, 166, 352, 912, 1267, 1362
HpyCH4III	ACNGT	5 cut(s)	853, 1027, 1231, 1404, 1798
HpyCH4IV	ACGT	2 cut(s)	714, 1157
HpyF10VI	GCNNNNNNNGC	5 cut(s)	56, 596, 677, 773, 1000
HpyF3I	CTNAG	5 cut(s)	41, 133, 221, 1063, 1249
HpySE526I	ACGT	2 cut(s)	714, 1157
Hsp92I	GRCGYC	1 cut(s)	1157
HspAI	GCGC	2 cut(s)	50, 267
Kpn2I	TCCGGA	1 cut(s)	662
Ksp22I	TGATCA	1 cut(s)	1425
Kzo9I	GATC	5 cut(s)	1207, 1300, 1381, 1425, 1637
LguI	GCTCTTC	1 cut(s)	159
LmnI	GCTCC	1 cut(s)	1494
Lsp1109I	GCAGC	7 cut(s)	22, 662, 1090, 1261, 1358, 1507, 1576
LweI	GCATC	2 cut(s)	322, 637
MaeI	CTAG	5 cut(s)	681, 954, 1034, 1295, 1763
MaeII	ACGT	2 cut(s)	714, 1157
MaeIII	GTNAC	4 cut(s)	717, 1120, 1252, 1558
MalI	GATC	5 cut(s)	1209, 1302, 1383, 1427, 1639
MboI	GATC	5 cut(s)	1207, 1300, 1381, 1425, 1637
MboII	GAAGA	7 cut(s)	29, 146, 430, 899, 935, 1524, 1793
MfeI	CAATTG	2 cut(s)	701, 1004
MhlI	GDGCHC	2 cut(s)	154, 1422
MlyI	GAGTC	1 cut(s)	1241
MnlI	CCTC	9 cut(s)	277, 306, 513, 574, 1093, 1519, 1599, 1612, 1672
MroI	TCCGGA	1 cut(s)	662
MroXI	GAANNNNTTC	2 cut(s)	440, 1797
MseI	TTAA	8 cut(s)	962, 1116, 1167, 1341, 1406, 1536, 1541, 1653
MslI	CAYNNNNRTG	5 cut(s)	167, 633, 983, 1014, 1497
MspA1I	CMGCKG	1 cut(s)	220
MspI	CCGG	3 cut(s)	663, 1244, 1662
MspR9I	CCNGG	2 cut(s)	15, 1662
MunI	CAATTG	2 cut(s)	701, 1004
Mva1269I	GAATGC	1 cut(s)	615
MvaI	CCWGG	1 cut(s)	15
MvnI	CGCG	2 cut(s)	267, 512
MwoI	GCNNNNNNNGC	5 cut(s)	56, 596, 677, 773, 1000
NciI	CCSGG	1 cut(s)	1662
NcoI	CCATGG	1 cut(s)	1492
NdeII	GATC	5 cut(s)	1207, 1300, 1381, 1425, 1637
NlaIV	GGNNCC	3 cut(s)	30, 1490, 1659
NmuCI	GTSAC	2 cut(s)	1120, 1252
NruI	TCGCGA	1 cut(s)	512
NspI	RCATGY	4 cut(s)	166, 710, 1013, 1485
PaeI	GCATGC	2 cut(s)	710, 1013
PagI	TCATGA	1 cut(s)	814
PciI	ACATGT	1 cut(s)	162
PciSI	GCTCTTC	1 cut(s)	159
PcsI	WCGNNNNNNNCGW	1 cut(s)	359
PctI	GAATGC	1 cut(s)	615
PdmI	GAANNNNTTC	2 cut(s)	440, 1797
PfeI	GAWTC	5 cut(s)	617, 737, 1037, 1531, 1766
PkrI	GCNGC	9 cut(s)	12, 219, 652, 1105, 1276, 1373, 1522, 1591, 1615
PleI	GAGTC	1 cut(s)	1241
PpsI	GAGTC	1 cut(s)	1241
PscI	ACATGT	1 cut(s)	162
PshBI	ATTAAT	1 cut(s)	1167
PsiI	TTATAA	1 cut(s)	276
Psp6I	CCWGG	1 cut(s)	13
PspGI	CCWGG	1 cut(s)	13
PspN4I	GGNNCC	3 cut(s)	30, 1490, 1659
PspPI	GGNCC	3 cut(s)	28, 583, 846
PstI	CTGCAG	1 cut(s)	1525
PstNI	CAGNNNCTG	1 cut(s)	803
RruI	TCGCGA	1 cut(s)	512
RsaI	GTAC	6 cut(s)	99, 107, 470, 1053, 1076, 1190
RsaNI	GTAC	6 cut(s)	98, 106, 469, 1052, 1075, 1189
RseI	CAYNNNNRTG	5 cut(s)	167, 633, 983, 1014, 1497
SapI	GCTCTTC	1 cut(s)	159
SaqAI	TTAA	8 cut(s)	962, 1116, 1167, 1341, 1406, 1536, 1541, 1653
SatI	GCNGC	9 cut(s)	11, 218, 651, 1104, 1275, 1372, 1521, 1590, 1614
Sau3AI	GATC	5 cut(s)	1207, 1300, 1381, 1425, 1637
Sau96I	GGNCC	3 cut(s)	28, 583, 846
SchI	GAGTC	1 cut(s)	1241
ScrFI	CCNGG	2 cut(s)	15, 1662
SduI	GDGCHC	2 cut(s)	154, 1422
SfaNI	GCATC	2 cut(s)	322, 637
SfcI	CTRYAG	1 cut(s)	1521
SinI	GGWCC	3 cut(s)	28, 583, 846
SmiMI	CAYNNNNRTG	5 cut(s)	167, 633, 983, 1014, 1497
SmlI	CTYRAG	3 cut(s)	53, 870, 989
SmoI	CTYRAG	3 cut(s)	53, 870, 989
SpeI	ACTAGT	1 cut(s)	1294
SphI	GCATGC	2 cut(s)	710, 1013
SsiI	CCGC	4 cut(s)	218, 734, 1509, 1614
SspMI	CTAG	5 cut(s)	681, 954, 1034, 1295, 1763
StyD4I	CCNGG	2 cut(s)	13, 1660
StyI	CCWWGG	1 cut(s)	1492
TaaI	ACNGT	5 cut(s)	853, 1027, 1231, 1404, 1798
TaiI	ACGT	2 cut(s)	717, 1160
TaqI	TCGA	3 cut(s)	207, 1079, 1393
TatI	WGTACW	3 cut(s)	97, 468, 1074
TauI	GCSGC	2 cut(s)	220, 1616
TfiI	GAWTC	5 cut(s)	617, 737, 1037, 1531, 1766
Tru1I	TTAA	8 cut(s)	962, 1116, 1167, 1341, 1406, 1536, 1541, 1653
Tru9I	TTAA	8 cut(s)	962, 1116, 1167, 1341, 1406, 1536, 1541, 1653
TscAI	CASTG	4 cut(s)	259, 753, 856, 1257
TseFI	GTSAC	2 cut(s)	1120, 1252
TseI	GCWGC	7 cut(s)	10, 650, 1103, 1274, 1371, 1520, 1589
Tsp45I	GTSAC	2 cut(s)	1120, 1252
TspDTI	ATGAA	9 cut(s)	185, 431, 651, 803, 831, 1140, 1249, 1350, 1793
TspRI	CASTG	4 cut(s)	259, 753, 856, 1257
VpaK11BI	GGWCC	3 cut(s)	28, 583, 846
VspI	ATTAAT	1 cut(s)	1167
XapI	RAATTY	3 cut(s)	399, 754, 1337
XbaI	TCTAGA	1 cut(s)	1033
XceI	RCATGY	4 cut(s)	166, 710, 1013, 1485
XmiI	GTMKAC	2 cut(s)	1093, 1466
XmnI	GAANNNNTTC	2 cut(s)	440, 1797
XspI	CTAG	5 cut(s)	681, 954, 1034, 1295, 1763
ZraI	GACGTC	1 cut(s)	1158

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.