Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0008424

Physical Location & Seq

Genomic Coordinates Reverse (-)

11261268 .. 11263386

Gene Structure 2119 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G011100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGGTTTTAACCATTAGACCTCAAATTCGAAGAATATTTACCAGTTCAGCCTTTGCTCGCCCAGAATGTAGAACCCTTATGGTTCCCGAATCAAAAACAGAGCAACTAGAGCAGAAAATCCGTCGCTCTAATCATGTAGATATGCTCGAACTCAACTCTCAACTGAAGCAGCTAGTCAAAATTGGTAATGTCAAAGATGCCCGGAAGACGTTCGATGAAATGCCAAAGAGAGATGAGGTTTCATGGACCAATATGATTTCAGGCTATGTTGGAGTCTCTGATTCCTCTGAAGCATTGGCTCTGTTCTCAAACATGTGGGTGCAGCCAGGTCTCTGCATGGACCCTTTTCTTCTCAGCATTACCCTCAAGGCTTGTGGACTTGGAAGGAACTTGTCTTATGGGGAAGTTGTACATGGGTACTCGGTGAAATCGGGTTTTGTGAACTCAGTCTTTGTGGGTAGTGCTCTTCTTGACATGTATATGAAGGTTGGTGAGATTGAGAAGGGTTGTAGAGTTTTCGACGCAATGCCGCTGAGAAATGTGGTGTCGTGGACTACCATTATCACTGGTCTCGTTCGCGCAGGTCATAATGTGGAGGGGTTGCGATATTTTGCTGAAATGTGGAGGTGTAGGGTGCAATGTGATGCGTATGCGTTTGCTATCTCGTTGAAGGCGTGTGCTGATTTGGGTGCTTTGAAGTGTGGGAGAGAAATTCACACGCAAACGATGAAGAAAGGGTTTGATGAGAACTCTTTCGTAGCCAACTCTCTTGCTACCATGTACAATAAATGTGGAAAATTGGACTATGGGGTGCAGTTGTTCGCGAACATGAGGACGCAGGATGTTGTTTCGTGGACATCAATCATTACATCGTATTTTTGGACGGGTCGAGAGGACCATGCAATCAAAGCATTTATGCGAATGCAGGAATCTGGTGTGCATCCTAATGAATACACTTTTGCAGCCGTTATCTCCGGATGTGCCAATCTTGCTAGAGTTGAATGGGGTGAACAATTGCATGCCAACGTGTTACGCTTGGGTCTTGCGGATTCTTTGTCAGTGGGAAATTCAGTTATAGCCATGTATGCTAAATGTGGGCGTTTGGCTTCAGCTTCTGTTGTGTTTCATGAGATGGGCAGAAAAGATATTGTTTCATGGACCACTGTAATTGCAGGGTATTCTCAAGCAGGTTATGGGGAAGAAGCTTTCAAGTATTTATCGTGGATGAGAAGGGAAGAACCAAAACCAAACGAGTATGCTTTTGCGAGTGTATTAAGTGTTTGTGGAAGCATGGCAATGCTTGAGCAAGGCAAGCAATTGCATGCTCATGTCCTAACGGTAGGTCTAGATTCTGAAGCTATGGTACAAAGTGCCTTAGTCAATCTGTACTCGAAATGCGGAAGTATACAAGAGGCTGCAAAAATCTTTGATGTGACAAAAGCAAAAGATGATGATGTTATTTCATGGACGTCCATGATTAATGGATATGCTCAACATGGGTACTACCAAATGACCTTCATTGGTGTTCTTGCTGCGTGTAGCCATGCTGGACTAGTTGATCTTGGTTTCCACTACTTCAACTCAATGAGCAATGAATTTAAGATTAGTCCTTCAAAAGAACACTACGGCTGCATGATCGATCTCCTTTGTCGAGCTGGACGGTTAAGTGAAGCAGAGCACATGATCAAAAGTATGCCAGTTCAACAGGATGATGTTGTCTGGTCTACTCTACTTACAGCATGTCGGCTCCATGGTGATGTTGACTGCGGAAGACACGCTGCAGAGGAGATTCTTAAATTAAATCCTAATTGTGCAGTGACTCACATAACGCTAGCTGGTATTTATGCTGCCAAAGGAATGTGGAGGGAAGCCGCAGAGGTAAGGAGAATGATGAGATCAAAGGGCGTAATTAAGGAACCCGGATGGTCTGGGATAGAGGTCAAGAATGGGATTTCTGTGTTTGTTGCTGGAGATAGGTCTCATCCACAAGGTGATGAGATATATAGTGTGCTGGAATTACTAGATTCAAAGGCAGAGATTTCTACTCGGGAAACAGTTCTTCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00051 map00051

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

688

Amino Acids

76.49

Weight (kDa)

7.03

Isoelectric Point (pI)

36.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	179 - 227	1.9e-07	PPR repeat family
PPR_2	PF13041	281 - 329	6.5e-12	PPR repeat family
PPR_3	PF13812	281 - 327	3.6e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	381 - 428	2.4e-09	PPR repeat family
E_motif	PF20431	584 - 646	3.5e-10	E motif
Eplus_motif	PF20430	654 - 672	5.9e-06	E+ motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008424)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47840
fragaria_vesca	FvH4_1g12800 FvH4_2g13800
malus_domestica	MD02G1143600.v1.1 MD15G1256800.v1.1
prunus_persica	Prupe.7G158100_v2.0.a1
pyrus_communis	pycom02g11350 pycom11g12090 pycom15g22480
rosa_chinensis	RchiOBHm_Chr2g0100941
rosa_laevigata	RLG00000016992 RLG00000017027
rosa_multiflora	Rmu_sc0001659.1_g000049 Rmu_sc0001862.1_g000015
rosa_roxburghii	Rroxscaffold_2G00141730
rosa_rugosa	Rorug02G0091300 Rorug02G0093800
rosa_samantha	Rh2AG141500 Rh2BG143000 Rh2BG146700 Rh2CG147900 Rh2DG147200
rosa_wichuraiana	Rw2G011100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1472
Acc36I	ACCTGC	2 cut(s)	572, 1178
AccI	GTMKAC	2 cut(s)	1405, 1724
AccII	CGCG	2 cut(s)	579, 824
AccIII	TCCGGA	1 cut(s)	974
AciI	CCGC	5 cut(s)	530, 1046, 1398, 1767, 1872
AcsI	RAATTY	4 cut(s)	24, 711, 1066, 1595
AcuI	CTGAAG	4 cut(s)	185, 309, 1092, 1374
AcyI	GRCGYC	1 cut(s)	1469
AdeI	CACNNNGTG	1 cut(s)	1991
AfaI	GTAC	6 cut(s)	411, 419, 782, 1365, 1388, 1502
AflIII	ACRYGT	3 cut(s)	312, 474, 1026
AgsI	TTSAA	8 cut(s)	670, 697, 1001, 1210, 1579, 1614, 1703, 2028
AhlI	ACTAGT	1 cut(s)	1552
AjnI	CCWGG	1 cut(s)	325
AluBI	AGCT	6 cut(s)	172, 1112, 1205, 1358, 1655, 1835
AluI	AGCT	6 cut(s)	172, 1112, 1205, 1358, 1655, 1835
Alw21I	GWGCWC	2 cut(s)	466, 1680
Alw26I	GTCTC	4 cut(s)	280, 335, 575, 1983
AlwNI	CAGNNNCTG	1 cut(s)	1115
Ama87I	CYCGRG	1 cut(s)	2046
Aor13HI	TCCGGA	1 cut(s)	974
ApeKI	GCWGC	8 cut(s)	169, 322, 962, 1415, 1532, 1629, 1778, 1847
ApoI	RAATTY	4 cut(s)	24, 711, 1066, 1595
ArsI	GACNNNNNNTTYG	2 cut(s)	9, 41
AseI	ATTAAT	1 cut(s)	1479
Asp700I	GAANNNNTTC	3 cut(s)	209, 752, 2055
AspLEI	GCGC	1 cut(s)	581
AspS9I	GGNCC	4 cut(s)	246, 340, 895, 1158
AsuC2I	CCSGG	2 cut(s)	202, 1920
AsuHPI	GGTGA	5 cut(s)	436, 503, 1019, 1766, 2003
AsuII	TTCGAA	1 cut(s)	28
AsuNHI	GCTAGC	1 cut(s)	1831
AvaI	CYCGRG	1 cut(s)	2046
AvaII	GGWCC	4 cut(s)	246, 340, 895, 1158
BarI	GAAGNNNNNNTAC	4 cut(s)	22, 54, 1347, 1379
BbsI	GAAGAC	2 cut(s)	212, 1777
Bbv12I	GWGCWC	2 cut(s)	466, 1680
BbvI	GCAGC	8 cut(s)	181, 334, 974, 1402, 1519, 1616, 1765, 1834
BccI	CCATC	2 cut(s)	1126, 1917
BceAI	ACGGC	2 cut(s)	950, 1642
BciT130I	CCWGG	1 cut(s)	327
BclI	TGATCA	1 cut(s)	1683
BcnI	CCSGG	2 cut(s)	202, 1920
BcoDI	GTCTC	4 cut(s)	280, 335, 575, 1983
BcuI	ACTAGT	1 cut(s)	1552
BfaI	CTAG	7 cut(s)	107, 173, 993, 1346, 1553, 1832, 2021
BfmI	CTRYAG	1 cut(s)	1779
BfuAI	ACCTGC	2 cut(s)	572, 1178
Bme1390I	CCNGG	3 cut(s)	202, 327, 1920
Bme18I	GGWCC	4 cut(s)	246, 340, 895, 1158
BmeT110I	CYCGRG	1 cut(s)	2046
BmgT120I	GGNCC	4 cut(s)	246, 340, 895, 1158
BmiI	GGNNCC	4 cut(s)	84, 342, 1748, 1917
BmrFI	CCNGG	3 cut(s)	202, 327, 1920
BmsI	GCATC	3 cut(s)	187, 634, 949
BmtI	GCTAGC	1 cut(s)	1835
BpiI	GAAGAC	2 cut(s)	212, 1777
BpmI	CTGGAG	1 cut(s)	1989
Bpu14I	TTCGAA	1 cut(s)	28
BpuEI	CTTGAG	3 cut(s)	350, 1167, 1322
BpuMI	CCSGG	2 cut(s)	202, 1920
Bsa29I	ATCGAT	1 cut(s)	1638
BsaHI	GRCGYC	1 cut(s)	1469
BsaI	GGTCTC	3 cut(s)	335, 575, 1983
BsaJI	CCNNGG	1 cut(s)	1750
BsaWI	WCCGGW	1 cut(s)	974
Bse1I	ACTGG	3 cut(s)	42, 571, 1697
Bse3DI	GCAATG	4 cut(s)	531, 644, 1302, 1597
BseAI	TCCGGA	1 cut(s)	974
BseBI	CCWGG	1 cut(s)	327
BseCI	ATCGAT	1 cut(s)	1638
BseDI	CCNNGG	1 cut(s)	1750
BseGI	GGATG	7 cut(s)	847, 940, 983, 1230, 1714, 1928, 1981
BseMI	GCAATG	4 cut(s)	531, 644, 1302, 1597
BseMII	CTCAG	3 cut(s)	367, 459, 524
BseNI	ACTGG	3 cut(s)	42, 571, 1697
BseRI	GAGGAG	1 cut(s)	1799
BseXI	GCAGC	8 cut(s)	181, 334, 974, 1402, 1519, 1616, 1765, 1834
BsgI	GTGCAG	3 cut(s)	341, 833, 1833
Bsh1236I	CGCG	2 cut(s)	579, 824
BshVI	ATCGAT	1 cut(s)	1638
BsiHKAI	GWGCWC	2 cut(s)	466, 1680
BsiHKCI	CYCGRG	1 cut(s)	2046
BsiSI	CCGG	3 cut(s)	202, 975, 1920
BsmAI	GTCTC	4 cut(s)	280, 335, 575, 1983
BsmI	GAATGC	1 cut(s)	927
Bso31I	GGTCTC	3 cut(s)	335, 575, 1983
BsoBI	CYCGRG	1 cut(s)	2046
Bsp119I	TTCGAA	1 cut(s)	28
Bsp1286I	GDGCHC	2 cut(s)	466, 1680
Bsp13I	TCCGGA	1 cut(s)	974
Bsp1407I	TGTACA	2 cut(s)	409, 780
Bsp143I	GATC	5 cut(s)	1558, 1635, 1639, 1683, 1895
Bsp19I	CCATGG	1 cut(s)	1750
Bsp68I	TCGCGA	1 cut(s)	824
BspACI	CCGC	5 cut(s)	530, 1046, 1398, 1767, 1872
BspCNI	CTCAG	3 cut(s)	366, 458, 525
BspDI	ATCGAT	1 cut(s)	1638
BspEI	TCCGGA	1 cut(s)	974
BspFNI	CGCG	2 cut(s)	579, 824
BspHI	TCATGA	1 cut(s)	1126
BspLI	GGNNCC	4 cut(s)	84, 342, 1748, 1917
BspMAI	CTGCAG	1 cut(s)	1783
BspMI	ACCTGC	2 cut(s)	572, 1178
BspOI	GCTAGC	1 cut(s)	1835
BspQI	GCTCTTC	1 cut(s)	471
BspT104I	TTCGAA	1 cut(s)	28
BspTNI	GGTCTC	3 cut(s)	335, 575, 1983
BsrDI	GCAATG	4 cut(s)	531, 644, 1302, 1597
BsrGI	TGTACA	2 cut(s)	409, 780
BsrI	ACTGG	3 cut(s)	42, 571, 1697
BssECI	CCNNGG	1 cut(s)	1750
BssMI	GATC	5 cut(s)	1558, 1635, 1639, 1683, 1895
BssNAI	GTATAC	1 cut(s)	1406
BssNI	GRCGYC	1 cut(s)	1469
BssT1I	CCWWGG	1 cut(s)	1750
Bst1107I	GTATAC	1 cut(s)	1406
Bst2UI	CCWGG	1 cut(s)	327
Bst4CI	ACNGT	4 cut(s)	1165, 1339, 1662, 2056
Bst6I	CTCTTC	1 cut(s)	471
BstACI	GRCGYC	1 cut(s)	1469
BstAUI	TGTACA	2 cut(s)	409, 780
BstBI	TTCGAA	1 cut(s)	28
BstC8I	GCNNGC	5 cut(s)	58, 1020, 1313, 1323, 1833
BstDEI	CTNAG	4 cut(s)	353, 445, 533, 1375
BstDSI	CCRYGG	1 cut(s)	1750
BstF5I	GGATG	7 cut(s)	847, 940, 983, 1230, 1714, 1928, 1981
BstFNI	CGCG	2 cut(s)	579, 824
BstHHI	GCGC	1 cut(s)	581
BstKTI	GATC	5 cut(s)	1561, 1638, 1642, 1686, 1898
BstMAI	GTCTC	4 cut(s)	280, 335, 575, 1983
BstMBI	GATC	5 cut(s)	1558, 1635, 1639, 1683, 1895
BstMWI	GCNNNNNNNGC	5 cut(s)	109, 908, 989, 1085, 1312
BstNI	CCWGG	1 cut(s)	327
BstNSI	RCATGY	5 cut(s)	316, 478, 1022, 1325, 1743
BstSCI	CCNGG	3 cut(s)	200, 325, 1918
BstSFI	CTRYAG	1 cut(s)	1779
BstUI	CGCG	2 cut(s)	579, 824
BstV1I	GCAGC	8 cut(s)	181, 334, 974, 1402, 1519, 1616, 1765, 1834
BstV2I	GAAGAC	2 cut(s)	212, 1777
BstZ17I	GTATAC	1 cut(s)	1406
Bsu15I	ATCGAT	1 cut(s)	1638
BsuTUI	ATCGAT	1 cut(s)	1638
BtgI	CCRYGG	1 cut(s)	1750
BtsCI	GGATG	7 cut(s)	847, 940, 983, 1230, 1714, 1928, 1981
BtsI	GCAGTG	1 cut(s)	1821
BtsIMutI	CAGTG	4 cut(s)	564, 1065, 1161, 1821
BtuMI	TCGCGA	1 cut(s)	824
BveI	ACCTGC	2 cut(s)	572, 1178
Cac8I	GCNNGC	5 cut(s)	58, 1020, 1313, 1323, 1833
CaiI	CAGNNNCTG	1 cut(s)	1115
CciI	TCATGA	1 cut(s)	1126
CfoI	GCGC	1 cut(s)	581
Cfr13I	GGNCC	4 cut(s)	246, 340, 895, 1158
ClaI	ATCGAT	1 cut(s)	1638
CseI	GACGC	2 cut(s)	530, 844
Csp6I	GTAC	6 cut(s)	410, 418, 781, 1364, 1387, 1501
CspCI	CAANNNNNGTGG	6 cut(s)	355, 390, 772, 807, 1150, 1185
CviQI	GTAC	6 cut(s)	410, 418, 781, 1364, 1387, 1501
DdeI	CTNAG	4 cut(s)	353, 445, 533, 1375
DpnI	GATC	5 cut(s)	1560, 1637, 1641, 1685, 1897
DpnII	GATC	5 cut(s)	1558, 1635, 1639, 1683, 1895
DraIII	CACNNNGTG	1 cut(s)	1991
Eam1104I	CTCTTC	1 cut(s)	471
EarI	CTCTTC	1 cut(s)	471
Eco130I	CCWWGG	1 cut(s)	1750
Eco31I	GGTCTC	3 cut(s)	335, 575, 1983
Eco47I	GGWCC	4 cut(s)	246, 340, 895, 1158
Eco57I	CTGAAG	4 cut(s)	185, 309, 1092, 1374
Eco88I	CYCGRG	1 cut(s)	2046
EcoRII	CCWGG	1 cut(s)	325
EcoT14I	CCWWGG	1 cut(s)	1750
ErhI	CCWWGG	1 cut(s)	1750
FbaI	TGATCA	1 cut(s)	1683
FblI	GTMKAC	2 cut(s)	1405, 1724
FokI	GGATG	7 cut(s)	854, 927, 990, 1237, 1721, 1935, 1968
FspBI	CTAG	7 cut(s)	107, 173, 993, 1346, 1553, 1832, 2021
GlaI	GCGC	1 cut(s)	580
GsuI	CTGGAG	1 cut(s)	1989
HapII	CCGG	3 cut(s)	202, 975, 1920
HgaI	GACGC	2 cut(s)	530, 844
HhaI	GCGC	1 cut(s)	581
Hin1I	GRCGYC	1 cut(s)	1469
Hin6I	GCGC	1 cut(s)	579
HinP1I	GCGC	1 cut(s)	579
HincII	GTYRAC	1 cut(s)	1762
HindII	GTYRAC	1 cut(s)	1762
HindIII	AAGCTT	1 cut(s)	1203
HinfI	GANTC	9 cut(s)	89, 273, 281, 929, 1049, 1349, 1789, 1819, 2024
HpaII	CCGG	3 cut(s)	202, 975, 1920
HphI	GGTGA	5 cut(s)	436, 503, 1019, 1766, 2003
Hpy166II	GTNNAC	8 cut(s)	377, 442, 552, 855, 1010, 1406, 1725, 1762
Hpy188I	TCNGA	3 cut(s)	280, 289, 1354
Hpy188III	TCNNGA	9 cut(s)	86, 470, 823, 890, 975, 1127, 1346, 1942, 2048
Hpy8I	GTNNAC	8 cut(s)	377, 442, 552, 855, 1010, 1406, 1725, 1762
Hpy99I	CGWCG	2 cut(s)	126, 524
HpyAV	CCTTC	7 cut(s)	378, 478, 496, 664, 1224, 1525, 1620
HpyCH4III	ACNGT	4 cut(s)	1165, 1339, 1662, 2056
HpyCH4IV	ACGT	3 cut(s)	209, 1026, 1469
HpyF10VI	GCNNNNNNNGC	5 cut(s)	109, 908, 989, 1085, 1312
HpyF3I	CTNAG	4 cut(s)	353, 445, 533, 1375
HpySE526I	ACGT	3 cut(s)	209, 1026, 1469
Hsp92I	GRCGYC	1 cut(s)	1469
HspAI	GCGC	1 cut(s)	579
Kpn2I	TCCGGA	1 cut(s)	974
Ksp22I	TGATCA	1 cut(s)	1683
Kzo9I	GATC	5 cut(s)	1558, 1635, 1639, 1683, 1895
LguI	GCTCTTC	1 cut(s)	471
LmnI	GCTCC	1 cut(s)	1752
Lsp1109I	GCAGC	8 cut(s)	181, 334, 974, 1402, 1519, 1616, 1765, 1834
LweI	GCATC	3 cut(s)	187, 634, 949
MaeI	CTAG	7 cut(s)	107, 173, 993, 1346, 1553, 1832, 2021
MaeII	ACGT	3 cut(s)	209, 1026, 1469
MaeIII	GTNAC	3 cut(s)	1029, 1432, 1816
MalI	GATC	5 cut(s)	1560, 1637, 1641, 1685, 1897
MboI	GATC	5 cut(s)	1558, 1635, 1639, 1683, 1895
MboII	GAAGA	9 cut(s)	42, 217, 341, 458, 742, 1211, 1247, 1782, 2051
MfeI	CAATTG	2 cut(s)	1013, 1316
MhlI	GDGCHC	2 cut(s)	466, 1680
MlyI	GAGTC	2 cut(s)	282, 1813
MmeI	TCCRAC	1 cut(s)	250
MroI	TCCGGA	1 cut(s)	974
MroXI	GAANNNNTTC	3 cut(s)	209, 752, 2055
MseI	TTAA	8 cut(s)	8, 1274, 1479, 1599, 1664, 1794, 1799, 1911
MslI	CAYNNNNRTG	6 cut(s)	317, 479, 945, 1295, 1326, 1755
MspA1I	CMGCKG	1 cut(s)	532
MspI	CCGG	3 cut(s)	202, 975, 1920
MspR9I	CCNGG	3 cut(s)	202, 327, 1920
MunI	CAATTG	2 cut(s)	1013, 1316
Mva1269I	GAATGC	1 cut(s)	927
MvaI	CCWGG	1 cut(s)	327
MvnI	CGCG	2 cut(s)	579, 824
MwoI	GCNNNNNNNGC	5 cut(s)	109, 908, 989, 1085, 1312
NciI	CCSGG	2 cut(s)	202, 1920
NcoI	CCATGG	1 cut(s)	1750
NdeII	GATC	5 cut(s)	1558, 1635, 1639, 1683, 1895
NheI	GCTAGC	1 cut(s)	1831
NlaIV	GGNNCC	4 cut(s)	84, 342, 1748, 1917
NmuCI	GTSAC	2 cut(s)	1432, 1816
NruI	TCGCGA	1 cut(s)	824
NspI	RCATGY	5 cut(s)	316, 478, 1022, 1325, 1743
NspV	TTCGAA	1 cut(s)	28
PaeI	GCATGC	2 cut(s)	1022, 1325
PagI	TCATGA	1 cut(s)	1126
PciI	ACATGT	2 cut(s)	312, 474
PciSI	GCTCTTC	1 cut(s)	471
PcsI	WCGNNNNNNNCGW	1 cut(s)	671
PctI	GAATGC	1 cut(s)	927
PdmI	GAANNNNTTC	3 cut(s)	209, 752, 2055
PfeI	GAWTC	7 cut(s)	89, 281, 929, 1049, 1349, 1789, 2024
PleI	GAGTC	2 cut(s)	281, 1813
PpsI	GAGTC	2 cut(s)	281, 1813
PscI	ACATGT	2 cut(s)	312, 474
PshBI	ATTAAT	1 cut(s)	1479
Psp6I	CCWGG	1 cut(s)	325
PspGI	CCWGG	1 cut(s)	325
PspN4I	GGNNCC	4 cut(s)	84, 342, 1748, 1917
PspPI	GGNCC	4 cut(s)	246, 340, 895, 1158
PstI	CTGCAG	1 cut(s)	1783
PstNI	CAGNNNCTG	1 cut(s)	1115
RruI	TCGCGA	1 cut(s)	824
RsaI	GTAC	6 cut(s)	411, 419, 782, 1365, 1388, 1502
RsaNI	GTAC	6 cut(s)	410, 418, 781, 1364, 1387, 1501
RseI	CAYNNNNRTG	6 cut(s)	317, 479, 945, 1295, 1326, 1755
SapI	GCTCTTC	1 cut(s)	471
SaqAI	TTAA	8 cut(s)	8, 1274, 1479, 1599, 1664, 1794, 1799, 1911
Sau3AI	GATC	5 cut(s)	1558, 1635, 1639, 1683, 1895
Sau96I	GGNCC	4 cut(s)	246, 340, 895, 1158
SchI	GAGTC	2 cut(s)	282, 1813
ScrFI	CCNGG	3 cut(s)	202, 327, 1920
SduI	GDGCHC	2 cut(s)	466, 1680
SfaNI	GCATC	3 cut(s)	187, 634, 949
SfcI	CTRYAG	1 cut(s)	1779
SfuI	TTCGAA	1 cut(s)	28
SinI	GGWCC	4 cut(s)	246, 340, 895, 1158
SmiMI	CAYNNNNRTG	6 cut(s)	317, 479, 945, 1295, 1326, 1755
SmlI	CTYRAG	3 cut(s)	365, 1182, 1301
SmoI	CTYRAG	3 cut(s)	365, 1182, 1301
SpeI	ACTAGT	1 cut(s)	1552
SphI	GCATGC	2 cut(s)	1022, 1325
SsiI	CCGC	5 cut(s)	530, 1046, 1398, 1767, 1872
SspI	AATATT	1 cut(s)	36
SspMI	CTAG	7 cut(s)	107, 173, 993, 1346, 1553, 1832, 2021
StyD4I	CCNGG	3 cut(s)	200, 325, 1918
StyI	CCWWGG	1 cut(s)	1750
TaaI	ACNGT	4 cut(s)	1165, 1339, 1662, 2056
TaiI	ACGT	3 cut(s)	212, 1029, 1472
TaqI	TCGA	8 cut(s)	28, 147, 213, 519, 889, 1391, 1638, 1651
TatI	WGTACW	3 cut(s)	409, 780, 1386
TauI	GCSGC	2 cut(s)	532, 1874
TfiI	GAWTC	7 cut(s)	89, 281, 929, 1049, 1349, 1789, 2024
Tru1I	TTAA	8 cut(s)	8, 1274, 1479, 1599, 1664, 1794, 1799, 1911
Tru9I	TTAA	8 cut(s)	8, 1274, 1479, 1599, 1664, 1794, 1799, 1911
TscAI	CASTG	4 cut(s)	571, 1065, 1168, 1821
TseFI	GTSAC	2 cut(s)	1432, 1816
TseI	GCWGC	8 cut(s)	169, 322, 962, 1415, 1532, 1629, 1778, 1847
Tsp45I	GTSAC	2 cut(s)	1432, 1816
TspGWI	ACGGA	1 cut(s)	110
TspRI	CASTG	4 cut(s)	571, 1065, 1168, 1821
VpaK11BI	GGWCC	4 cut(s)	246, 340, 895, 1158
VspI	ATTAAT	1 cut(s)	1479
XapI	RAATTY	4 cut(s)	24, 711, 1066, 1595
XbaI	TCTAGA	1 cut(s)	1345
XceI	RCATGY	5 cut(s)	316, 478, 1022, 1325, 1743
XmiI	GTMKAC	2 cut(s)	1405, 1724
XmnI	GAANNNNTTC	3 cut(s)	209, 752, 2055
XspI	CTAG	7 cut(s)	107, 173, 993, 1346, 1553, 1832, 2021
ZraI	GACGTC	1 cut(s)	1470

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.