Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0001821

Physical Location & Seq

Genomic Coordinates Forward (+)

22872956 .. 22891722

Gene Structure 18767 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1212800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGCCAAACGAGATTATTCATTCCGATCTAATCGTAATTAGCTCGTTCAATTTTAAAAGGCCACGTGGAAAACCAACGTCGGCCGACCGACTCCCTTCAGACCGCCTCTCGAATTTCCCTCGTTTTCAAACCCACCGACGTCGATTGCAACTCCCAGCCCCAACAACACAACAACCTAACCGACGCTTTTTCCCCCAACCAAAATTAAAAGTCCACTTCTCCTTCCTCTTGACTCCGACCCGAAACATATCACCCATGGCCGTGGTCACCGCGAGCCCGGAGAGGATCGAAGCTCCTCCACAGAACCCGATCAAGGAGCCCTCGCCGTCGTCCACGCCGTCCAGACTCTCTACCGCCGACGCCCCCTCCGAAGCTGAAGGCTCGTCTTCGCCGCTTTTCTCTTGCTCGGCTGTCACACCCGATTGCAGCGAGACTTGCAATTCATCTCCCACCGCCGATCAGTCTGCAGCATCACTGAAGAGTGAAGAGTATCGCCAGTTGTTTCGCCTTCCGCCTGATGAAGAAGCCCTCATCGAAGATTTCAACTGTGCATTCCAGGAGAACATACTTATTCAGGGTCATATGTACCTGTTTGTTCATTATATTTGCTTTTACTCGAATATTTTTGGATTTGAGACAAAGAAAATAATCCCATTGCAAGAAGTCACAAGTGTACGAAGAGCAAAGACAGCAGGGATCTTCCCTAATGCCATAGAAATTTTTGCTGGAAGCAAGAAGTACTTCTTTGCATCCTTTCTGTCACGTGACGAAGCATTTAAGATAATAAATGATGGATGGTCGCAATATGTTGATGGTGCCAAAGAGATTACAGAACAGGACATGTTATCTGAGACTGGCAGTCAAGAGAATGGAGCTGGAATTGAAAGGGTGGAAAGCTCCCAGTGCTTAGTTGATGAATTGGATTCCACTGACAGGAACGAGGATATTGTTTCACAAGACTCTAAGCTTGCCTCCAATGTTGTAGACGACTCTGTGTTGACATCAATTCCAGAGCAATACGATACTGTAGAAGAGGATTTAGAACCAGCTCGGAATAATGACCCTTCATGTTCGAAAGATACTTTGATCTGGAAAGAGGAAAGCTCTGATGCTCCAAACGTTCCGGAGTGCTATACAAAGGTTGCAGATTCCGTGCAGATAAAGGTTGAAGATTTCTTTAGTTTATTTTTCTCCGACGATGTGTTCACAGAATCATTTCATAGAAGTTGTGGAGATAAAGAGTTGAAGTGTACTCCATGGAAACCTCATGAGTTTGGCCATTCCCGTGATGTTTCTTTTCAGCACCCTATAAAAATTTATTTTGGTGCAAAATTTGGCAGCTGCCAGGAGCTCCAGAAATTTCGAGTTCACAGAAACAGCCACTTAGTTATTGAGACATCACAAGAAATCAATGATGTGCCTTATGGAGATTATTTCCGTGTTGAGGGATTTTGGGACATTGAGAGAGATCCTGATGGATCAAAGGAATGCTGCAATTTGAAGATTTATATTAACGTGGCATTTTCAAAGAGAACTGTTTGGAAAGGCAAAATAGTGCAGTCTACCATGGAAGAATGTCGAGAAGTTTTTGAAACCTGGATAAACATGGCACATGAATTGTTGAAGAGGAAGAATCTTGAAAAACAAGAAGAGAGGATTCCTGCAGTTAGCATGGTTCAGAAATGTGAAGTTCATACTCAAATTGAAGCAGAGATGTGTGTACCTACAGAAAGGTTTTACGAGCCCAGTGAACACGCTAGGGTACAACACTTGTCTAAATCCATGGATGCGACCCAGCAAGTTGGGAGAGAATCTATGCTGAAATTCCACGCCTCTTTGAGAACTCAAAGCCAGCTTCCGTTGATCATAGTCATCGTGTTTGTTGTGATTTTCATCATGCAGTTGAGCATACTTGCGCTATTAGCCAGACCCCAACACATCCATGTGAACTCACCTGTGGACTACGGGAGTGGCTTGGGTAGTCAAGTAGGTGAAAGATCATCTGAGGTTGTCACTTGGTTGGAGAAGCGAATCCACCACCTCAAAGACGAAATGCACTTGGTTGAGACTCGGCTTGAGAGTATGCGGCATAAACATACTCTGTTAAAAGATCAACTGGAGGACATTACTAAGCGCAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0010033 GO:0010941 GO:0012505 GO:0014070 GO:0042221 GO:0042493 GO:0042742 GO:0043067 GO:0043069 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0060548 GO:0065007 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4782 GRAM

Protein Analysis

714

Amino Acids

81.45

Weight (kDa)

5.58

Isoelectric Point (pI)

59.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAM	PF02893	164 - 268	7e-25	GRAM domain
VASt	PF16016	384 - 525	7.6e-34	VAD1 Analog of StAR-related lipid transfer domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02120 AT1G02120 AT1G02120
fragaria_vesca	FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200
malus_domestica	MD02G1212800.v1.1 MD07G1109200.v1.1
prunus_persica	Prupe.2G131900_v2.0.a1 Prupe.2G131900_v2.0.a1 Prupe.2G131900_v2.0.a1
pyrus_communis	pycom02g17530 pycom07g09350
rosa_chinensis	RchiOBHm_Chr1g0347921
rosa_laevigata	RLG00000003066 RLG00000028703 RLG00000030623
rosa_multiflora	Rmu_co8098638.1_g000001 Rmu_ssc0000342.1_g000013 Rmu_ssc0000342.1_g000014 Rmu_ssc0000342.1_g000015
rosa_roxburghii	Rroxscaffold_4G00307370
rosa_rugosa	Rorug01G0190400
rosa_samantha	Rh1AG208900 Rh1BG173500 Rh1CG193100 Rh1DG203500 Rh2CG347700 Rh4AG404300 Rh4BG415400 Rh5AG377600
rosa_wichuraiana	Rw1G017360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	142
Acc36I	ACCTGC	1 cut(s)	2127
AccB1I	GGYRCC	1 cut(s)	815
AccI	GTMKAC	2 cut(s)	984, 1562
AccII	CGCG	1 cut(s)	272
AccIII	TCCGGA	1 cut(s)	1123
AciI	CCGC	7 cut(s)	103, 270, 354, 392, 453, 512, 2086
AclI	AACGTT	1 cut(s)	1119
AclWI	GGATC	4 cut(s)	293, 704, 1463, 1486
AcoI	YGGCCR	3 cut(s)	81, 258, 1276
AcsI	RAATTY	6 cut(s)	112, 717, 1314, 1331, 1358, 1823
AcuI	CTGAAG	3 cut(s)	81, 396, 497
AcvI	CACGTG	2 cut(s)	65, 764
AcyI	GRCGYC	2 cut(s)	139, 360
AfaI	GTAC	6 cut(s)	587, 675, 740, 1252, 1722, 1764
AfiI	CCNNNNNNNGG	3 cut(s)	313, 933, 1444
AflIII	ACRYGT	1 cut(s)	840
AhdI	GACNNNNNGTC	1 cut(s)	858
AjnI	CCWGG	3 cut(s)	555, 1344, 1595
Alw21I	GWGCWC	1 cut(s)	1353
Alw26I	GTCTC	5 cut(s)	425, 629, 845, 1388, 2060
AlwI	GGATC	4 cut(s)	293, 704, 1463, 1486
Aor13HI	TCCGGA	1 cut(s)	1123
AoxI	GGCC	4 cut(s)	59, 81, 258, 1276
ApeKI	GCWGC	5 cut(s)	426, 467, 1338, 1341, 1491
ApoI	RAATTY	6 cut(s)	112, 717, 1314, 1331, 1358, 1823
Asp700I	GAANNNNTTC	2 cut(s)	740, 1215
AspLEI	GCGC	2 cut(s)	1918, 2136
AsuC2I	CCSGG	1 cut(s)	278
AsuHPI	GGTGA	4 cut(s)	243, 259, 1944, 2003
AsuII	TTCGAA	1 cut(s)	1073
BalI	TGGCCA	1 cut(s)	1278
BanI	GGYRCC	1 cut(s)	815
BanII	GRGCYC	4 cut(s)	278, 321, 1353, 1746
BbrPI	CACGTG	2 cut(s)	65, 764
BbsI	GAAGAC	1 cut(s)	378
Bbv12I	GWGCWC	1 cut(s)	1353
BbvI	GCAGC	5 cut(s)	438, 479, 1328, 1350, 1478
BccI	CCATC	4 cut(s)	785, 789, 806, 1469
BceAI	ACGGC	3 cut(s)	245, 310, 322
BcgI	CGANNNNNNTGC	2 cut(s)	446, 480
BciT130I	CCWGG	3 cut(s)	557, 1346, 1597
BclI	TGATCA	1 cut(s)	1863
BcnI	CCSGG	1 cut(s)	278
BcoDI	GTCTC	5 cut(s)	425, 629, 845, 1388, 2060
BfaI	CTAG	1 cut(s)	1758
BfmI	CTRYAG	4 cut(s)	465, 1026, 1662, 1725
BfuAI	ACCTGC	1 cut(s)	2127
BisI	GCNGC	7 cut(s)	392, 427, 468, 1339, 1342, 1492, 2087
BlsI	GCNGC	7 cut(s)	393, 428, 469, 1340, 1343, 1493, 2088
BmcAI	AGTACT	1 cut(s)	740
Bme1390I	CCNGG	4 cut(s)	278, 557, 1346, 1597
BmeRI	GACNNNNNGTC	1 cut(s)	858
BmiI	GGNNCC	2 cut(s)	318, 817
BmrFI	CCNGG	4 cut(s)	278, 557, 1346, 1597
BmrI	ACTGGG	2 cut(s)	895, 1740
BmsI	GCATC	4 cut(s)	479, 758, 1099, 1777
BmuI	ACTGGG	2 cut(s)	895, 1740
BpiI	GAAGAC	1 cut(s)	378
BplI	GAGNNNNNCTC	2 cut(s)	1088, 1120
BpmI	CTGGAG	2 cut(s)	1337, 2138
Bpu14I	TTCGAA	1 cut(s)	1073
BpuEI	CTTGAG	1 cut(s)	2096
BpuMI	CCSGG	1 cut(s)	278
BsaAI	YACGTR	2 cut(s)	65, 764
BsaBI	GATNNNNATC	1 cut(s)	1892
BsaHI	GRCGYC	2 cut(s)	139, 360
BsaJI	CCNNGG	5 cut(s)	255, 261, 1256, 1566, 1782
BsaWI	WCCGGW	1 cut(s)	1123
BsaXI	ACNNNNNCTCC	2 cut(s)	350, 380
Bsc4I	CCNNNNNNNGG	3 cut(s)	313, 933, 1444
Bse1I	ACTGG	5 cut(s)	496, 859, 901, 1746, 2121
Bse3DI	GCAATG	1 cut(s)	653
Bse8I	GATNNNNATC	1 cut(s)	1892
BseAI	TCCGGA	1 cut(s)	1123
BseBI	CCWGG	3 cut(s)	557, 1346, 1597
BseDI	CCNNGG	5 cut(s)	255, 261, 1256, 1566, 1782
BseGI	GGATG	4 cut(s)	749, 800, 1792, 1938
BseJI	GATNNNNATC	1 cut(s)	1892
BseLI	CCNNNNNNNGG	3 cut(s)	313, 933, 1444
BseMI	GCAATG	1 cut(s)	653
BseMII	CTCAG	2 cut(s)	840, 1995
BseNI	ACTGG	5 cut(s)	496, 859, 901, 1746, 2121
BseRI	GAGGAG	1 cut(s)	285
BseX3I	CGGCCG	1 cut(s)	81
BseXI	GCAGC	5 cut(s)	438, 479, 1328, 1350, 1478
BseYI	CCCAGC	2 cut(s)	154, 1794
BsgI	GTGCAG	2 cut(s)	1175, 1577
Bsh1236I	CGCG	1 cut(s)	272
Bsh1285I	CGRYCG	2 cut(s)	84, 88
BshFI	GGCC	4 cut(s)	61, 83, 260, 1278
BshNI	GGYRCC	1 cut(s)	815
BsiEI	CGRYCG	2 cut(s)	84, 88
BsiHKAI	GWGCWC	1 cut(s)	1353
BsiSI	CCGG	2 cut(s)	278, 1124
BslFI	GGGAC	1 cut(s)	1469
BslI	CCNNNNNNNGG	3 cut(s)	313, 933, 1444
BsmAI	GTCTC	5 cut(s)	425, 629, 845, 1388, 2060
BsmFI	GGGAC	1 cut(s)	1469
BsmI	GAATGC	2 cut(s)	551, 1493
BsnI	GGCC	4 cut(s)	61, 83, 260, 1278
Bsp119I	TTCGAA	1 cut(s)	1073
Bsp1286I	GDGCHC	4 cut(s)	278, 321, 1353, 1746
Bsp13I	TCCGGA	1 cut(s)	1123
Bsp19I	CCATGG	4 cut(s)	255, 1256, 1566, 1782
BspACI	CCGC	7 cut(s)	103, 270, 354, 392, 453, 512, 2086
BspANI	GGCC	4 cut(s)	61, 83, 260, 1278
BspCNI	CTCAG	2 cut(s)	841, 1996
BspEI	TCCGGA	1 cut(s)	1123
BspFNI	CGCG	1 cut(s)	272
BspHI	TCATGA	1 cut(s)	1267
BspLI	GGNNCC	2 cut(s)	318, 817
BspMAI	CTGCAG	2 cut(s)	469, 1666
BspMI	ACCTGC	1 cut(s)	2127
BspPI	GGATC	4 cut(s)	293, 704, 1463, 1486
BspQI	GCTCTTC	1 cut(s)	673
BspT104I	TTCGAA	1 cut(s)	1073
BspT107I	GGYRCC	1 cut(s)	815
BsrDI	GCAATG	1 cut(s)	653
BsrI	ACTGG	5 cut(s)	496, 859, 901, 1746, 2121
BssECI	CCNNGG	5 cut(s)	255, 261, 1256, 1566, 1782
BssNI	GRCGYC	2 cut(s)	139, 360
BssT1I	CCWWGG	4 cut(s)	255, 1256, 1566, 1782
Bst2UI	CCWGG	3 cut(s)	557, 1346, 1597
Bst4CI	ACNGT	3 cut(s)	548, 1027, 1537
Bst6I	CTCTTC	6 cut(s)	473, 480, 673, 1026, 1619, 1644
BstACI	GRCGYC	2 cut(s)	139, 360
BstBAI	YACGTR	2 cut(s)	65, 764
BstBI	TTCGAA	1 cut(s)	1073
BstC8I	GCNNGC	3 cut(s)	274, 969, 1853
BstDEI	CTNAG	6 cut(s)	849, 907, 963, 1384, 2004, 2130
BstDSI	CCRYGG	5 cut(s)	255, 261, 1256, 1566, 1782
BstEII	GGTNACC	1 cut(s)	265
BstF5I	GGATG	4 cut(s)	749, 800, 1792, 1938
BstFNI	CGCG	1 cut(s)	272
BstHHI	GCGC	2 cut(s)	1918, 2136
BstMAI	GTCTC	5 cut(s)	425, 629, 845, 1388, 2060
BstMCI	CGRYCG	2 cut(s)	84, 88
BstMWI	GCNNNNNNNGC	4 cut(s)	435, 689, 903, 1922
BstNI	CCWGG	3 cut(s)	557, 1346, 1597
BstNSI	RCATGY	1 cut(s)	844
BstPI	GGTNACC	1 cut(s)	265
BstSCI	CCNGG	4 cut(s)	276, 555, 1344, 1595
BstSFI	CTRYAG	4 cut(s)	465, 1026, 1662, 1725
BstUI	CGCG	1 cut(s)	272
BstV1I	GCAGC	5 cut(s)	438, 479, 1328, 1350, 1478
BstV2I	GAAGAC	1 cut(s)	378
BstX2I	RGATCY	2 cut(s)	696, 1468
BstXI	CCANNNNNNTGG	2 cut(s)	262, 1802
BstYI	RGATCY	2 cut(s)	696, 1468
BstZI	CGGCCG	1 cut(s)	81
BsuRI	GGCC	4 cut(s)	61, 83, 260, 1278
BtgI	CCRYGG	5 cut(s)	255, 261, 1256, 1566, 1782
BtsCI	GGATG	4 cut(s)	749, 800, 1792, 1938
BtsIMutI	CAGTG	4 cut(s)	473, 908, 927, 1753
BveI	ACCTGC	1 cut(s)	2127
Cac8I	GCNNGC	3 cut(s)	274, 969, 1853
CciI	TCATGA	1 cut(s)	1267
CfoI	GCGC	2 cut(s)	1918, 2136
CseI	GACGC	2 cut(s)	192, 368
Csp6I	GTAC	6 cut(s)	586, 674, 739, 1251, 1721, 1763
CviQI	GTAC	6 cut(s)	586, 674, 739, 1251, 1721, 1763
DdeI	CTNAG	6 cut(s)	849, 907, 963, 1384, 2004, 2130
DraI	TTTAAA	1 cut(s)	55
DriI	GACNNNNNGTC	1 cut(s)	858
EaeI	YGGCCR	3 cut(s)	81, 258, 1276
EagI	CGGCCG	1 cut(s)	81
Eam1104I	CTCTTC	6 cut(s)	473, 480, 673, 1026, 1619, 1644
Eam1105I	GACNNNNNGTC	1 cut(s)	858
EarI	CTCTTC	6 cut(s)	473, 480, 673, 1026, 1619, 1644
EciI	GGCGGA	1 cut(s)	501
Ecl136II	GAGCTC	1 cut(s)	1351
EclXI	CGGCCG	1 cut(s)	81
Eco130I	CCWWGG	4 cut(s)	255, 1256, 1566, 1782
Eco24I	GRGCYC	4 cut(s)	278, 321, 1353, 1746
Eco52I	CGGCCG	1 cut(s)	81
Eco53kI	GAGCTC	1 cut(s)	1351
Eco57I	CTGAAG	3 cut(s)	81, 396, 497
Eco72I	CACGTG	2 cut(s)	65, 764
Eco91I	GGTNACC	1 cut(s)	265
EcoICRI	GAGCTC	1 cut(s)	1351
EcoO65I	GGTNACC	1 cut(s)	265
EcoRII	CCWGG	3 cut(s)	555, 1344, 1595
EcoT14I	CCWWGG	4 cut(s)	255, 1256, 1566, 1782
EcoT38I	GRGCYC	4 cut(s)	278, 321, 1353, 1746
ErhI	CCWWGG	4 cut(s)	255, 1256, 1566, 1782
FalI	AAGNNNNNCTT	4 cut(s)	725, 757, 728, 760
FaqI	GGGAC	1 cut(s)	1469
FauNDI	CATATG	1 cut(s)	582
FbaI	TGATCA	1 cut(s)	1863
FblI	GTMKAC	2 cut(s)	984, 1562
Fnu4HI	GCNGC	7 cut(s)	392, 427, 468, 1339, 1342, 1492, 2087
FokI	GGATG	4 cut(s)	736, 807, 1799, 1925
FriOI	GRGCYC	4 cut(s)	278, 321, 1353, 1746
Fsp4HI	GCNGC	7 cut(s)	392, 427, 468, 1339, 1342, 1492, 2087
FspBI	CTAG	1 cut(s)	1758
GlaI	GCGC	2 cut(s)	1917, 2135
GluI	GCNGC	7 cut(s)	392, 427, 468, 1339, 1342, 1492, 2087
GsaI	CCCAGC	2 cut(s)	158, 1798
GsuI	CTGGAG	2 cut(s)	1337, 2138
HaeIII	GGCC	4 cut(s)	61, 83, 260, 1278
HapII	CCGG	2 cut(s)	278, 1124
HgaI	GACGC	2 cut(s)	192, 368
HhaI	GCGC	2 cut(s)	1918, 2136
Hin1I	GRCGYC	2 cut(s)	139, 360
Hin6I	GCGC	2 cut(s)	1916, 2134
HinP1I	GCGC	2 cut(s)	1916, 2134
HincII	GTYRAC	1 cut(s)	999
HindII	GTYRAC	1 cut(s)	999
HindIII	AAGCTT	1 cut(s)	965
HpaII	CCGG	2 cut(s)	278, 1124
HphI	GGTGA	4 cut(s)	243, 259, 1944, 2003
Hpy99I	CGWCG	7 cut(s)	82, 141, 144, 186, 331, 362, 1199
HpyAV	CCTTC	5 cut(s)	105, 232, 371, 518, 1074
HpyCH4III	ACNGT	3 cut(s)	548, 1027, 1537
HpyCH4IV	ACGT	6 cut(s)	64, 77, 139, 763, 1119, 1515
HpyF10VI	GCNNNNNNNGC	4 cut(s)	435, 689, 903, 1922
HpyF3I	CTNAG	6 cut(s)	849, 907, 963, 1384, 2004, 2130
HpySE526I	ACGT	6 cut(s)	64, 77, 139, 763, 1119, 1515
Hsp92I	GRCGYC	2 cut(s)	139, 360
HspAI	GCGC	2 cut(s)	1916, 2134
Kpn2I	TCCGGA	1 cut(s)	1123
Ksp22I	TGATCA	1 cut(s)	1863
LguI	GCTCTTC	1 cut(s)	673
LmnI	GCTCC	7 cut(s)	298, 316, 872, 902, 1117, 1348, 1356
Lsp1109I	GCAGC	5 cut(s)	438, 479, 1328, 1350, 1478
LweI	GCATC	4 cut(s)	479, 758, 1099, 1777
MaeI	CTAG	1 cut(s)	1758
MaeII	ACGT	6 cut(s)	64, 77, 139, 763, 1119, 1515
MaeIII	GTNAC	6 cut(s)	265, 412, 664, 759, 764, 2011
MflI	RGATCY	2 cut(s)	696, 1468
MhlI	GDGCHC	4 cut(s)	278, 321, 1353, 1746
MlsI	TGGCCA	1 cut(s)	1278
MluNI	TGGCCA	1 cut(s)	1278
MlyI	GAGTC	6 cut(s)	84, 226, 339, 953, 983, 2062
MmeI	TCCRAC	3 cut(s)	260, 1218, 2001
Mox20I	TGGCCA	1 cut(s)	1278
MroI	TCCGGA	1 cut(s)	1123
MroXI	GAANNNNTTC	2 cut(s)	740, 1215
MscI	TGGCCA	1 cut(s)	1278
MseI	TTAA	5 cut(s)	54, 206, 777, 1512, 2105
MslI	CAYNNNNRTG	4 cut(s)	260, 1284, 1941, 1943
Msp20I	TGGCCA	1 cut(s)	1278
MspA1I	CMGCKG	1 cut(s)	1341
MspI	CCGG	2 cut(s)	278, 1124
MspR9I	CCNGG	4 cut(s)	278, 557, 1346, 1597
Mva1269I	GAATGC	2 cut(s)	551, 1493
MvaI	CCWGG	3 cut(s)	557, 1346, 1597
MvnI	CGCG	1 cut(s)	272
MwoI	GCNNNNNNNGC	4 cut(s)	435, 689, 903, 1922
NciI	CCSGG	1 cut(s)	278
NcoI	CCATGG	4 cut(s)	255, 1256, 1566, 1782
NdeI	CATATG	1 cut(s)	582
NlaIV	GGNNCC	2 cut(s)	318, 817
NmeAIII	GCCGAG	2 cut(s)	386, 2050
NmuCI	GTSAC	6 cut(s)	265, 412, 664, 759, 764, 2011
NspI	RCATGY	1 cut(s)	844
NspV	TTCGAA	1 cut(s)	1073
PagI	TCATGA	1 cut(s)	1267
PciI	ACATGT	1 cut(s)	840
PciSI	GCTCTTC	1 cut(s)	673
PcsI	WCGNNNNNNNCGW	2 cut(s)	335, 366
PctI	GAATGC	2 cut(s)	551, 1493
PdmI	GAANNNNTTC	2 cut(s)	740, 1215
PfeI	GAWTC	7 cut(s)	923, 1148, 1211, 1633, 1657, 1811, 2031
PfoI	TCCNGGA	1 cut(s)	555
PkrI	GCNGC	7 cut(s)	393, 428, 469, 1340, 1343, 1493, 2088
PleI	GAGTC	6 cut(s)	84, 226, 339, 953, 983, 2062
PmaCI	CACGTG	2 cut(s)	65, 764
PmlI	CACGTG	2 cut(s)	65, 764
PpsI	GAGTC	6 cut(s)	84, 226, 339, 953, 983, 2062
Ppu21I	YACGTR	2 cut(s)	65, 764
PscI	ACATGT	1 cut(s)	840
Psp124BI	GAGCTC	1 cut(s)	1353
Psp1406I	AACGTT	1 cut(s)	1119
Psp6I	CCWGG	3 cut(s)	555, 1344, 1595
PspCI	CACGTG	2 cut(s)	65, 764
PspEI	GGTNACC	1 cut(s)	265
PspFI	CCCAGC	2 cut(s)	154, 1794
PspGI	CCWGG	3 cut(s)	555, 1344, 1595
PspN4I	GGNNCC	2 cut(s)	318, 817
PstI	CTGCAG	2 cut(s)	469, 1666
PsuI	RGATCY	2 cut(s)	696, 1468
PvuII	CAGCTG	1 cut(s)	1341
RsaI	GTAC	6 cut(s)	587, 675, 740, 1252, 1722, 1764
RsaNI	GTAC	6 cut(s)	586, 674, 739, 1251, 1721, 1763
RseI	CAYNNNNRTG	4 cut(s)	260, 1284, 1941, 1943
SacI	GAGCTC	1 cut(s)	1353
SapI	GCTCTTC	1 cut(s)	673
SaqAI	TTAA	5 cut(s)	54, 206, 777, 1512, 2105
SatI	GCNGC	7 cut(s)	392, 427, 468, 1339, 1342, 1492, 2087
ScaI	AGTACT	1 cut(s)	740
SchI	GAGTC	6 cut(s)	84, 226, 339, 953, 983, 2062
ScrFI	CCNGG	4 cut(s)	278, 557, 1346, 1597
SduI	GDGCHC	4 cut(s)	278, 321, 1353, 1746
SfaNI	GCATC	4 cut(s)	479, 758, 1099, 1777
SfcI	CTRYAG	4 cut(s)	465, 1026, 1662, 1725
SfuI	TTCGAA	1 cut(s)	1073
SmiMI	CAYNNNNRTG	4 cut(s)	260, 1284, 1941, 1943
SmlI	CTYRAG	1 cut(s)	2075
SmoI	CTYRAG	1 cut(s)	2075
SsiI	CCGC	7 cut(s)	103, 270, 354, 392, 453, 512, 2086
SspI	AATATT	1 cut(s)	622
SspMI	CTAG	1 cut(s)	1758
SstI	GAGCTC	1 cut(s)	1353
StyD4I	CCNGG	4 cut(s)	276, 555, 1344, 1595
StyI	CCWWGG	4 cut(s)	255, 1256, 1566, 1782
TaaI	ACNGT	3 cut(s)	548, 1027, 1537
TaiI	ACGT	6 cut(s)	67, 80, 142, 766, 1122, 1518
TaqI	TCGA	8 cut(s)	110, 142, 288, 534, 617, 1073, 1363, 1579
TaqII	GACCGA	1 cut(s)	102
TatI	WGTACW	2 cut(s)	738, 1250
TauI	GCSGC	2 cut(s)	394, 2089
TfiI	GAWTC	7 cut(s)	923, 1148, 1211, 1633, 1657, 1811, 2031
Tru1I	TTAA	5 cut(s)	54, 206, 777, 1512, 2105
Tru9I	TTAA	5 cut(s)	54, 206, 777, 1512, 2105
TscAI	CASTG	4 cut(s)	480, 908, 934, 1753
TseFI	GTSAC	6 cut(s)	265, 412, 664, 759, 764, 2011
TseI	GCWGC	5 cut(s)	426, 467, 1338, 1341, 1491
Tsp45I	GTSAC	6 cut(s)	265, 412, 664, 759, 764, 2011
TspGWI	ACGGA	3 cut(s)	1141, 1427, 1848
TspRI	CASTG	4 cut(s)	480, 908, 934, 1753
XapI	RAATTY	6 cut(s)	112, 717, 1314, 1331, 1358, 1823
XceI	RCATGY	1 cut(s)	844
XmiI	GTMKAC	2 cut(s)	984, 1562
XmnI	GAANNNNTTC	2 cut(s)	740, 1215
XspI	CTAG	1 cut(s)	1758
ZraI	GACGTC	1 cut(s)	140
ZrmI	AGTACT	1 cut(s)	740

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.