Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0001821

Physical Location & Seq

Genomic Coordinates Forward (+)

8617258 .. 8630736

Gene Structure 13479 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g09350.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGGTAATTAGTCGACTGCAACTCCCACCCCCACAATACAACAACCCAACCGACGCTTTTTCCCCCCTACCAAAATTAGGTCCGCTTCTTCTTCCCCTTCGCCCCGAACCCGAAAACCCGACCCGAAACGTATCACACATGGCCGTGGCCACCGCGAGCCCGGAGAGGATCGAAGCTCCTCCGCAGAACCCGACAAAGGATCCCTCGCTGTCGCCGTCCAGGCTCTCCACCGCCGACGCCCCCTCCGAGGCTGAACGCTCCTCCTCGCCTCTTCTCTCTTACTCCGCCGACACGCCCAATCGCAGCGAGACTCGCAATTCTTCTCCCACTGCCGATGAGTCTGCAGCATCATTGAAGAGTGAAGAGTATCGCCAGTTGTTTCGCCTTCCGCCCGATGAAGTCCTCATCGAAGATTTCAACTGTGCATTCCAAGAGAACATACTTATTCAGGGTCATATGTACCTGTTTGTTCATTATATTTGCTTTTACTCAAATATATTTGGATTTGAGACAAAGAAAATAATTCCATTCCCAGAAGTCACAAGTGTACGAAGAGCAAAGACAGCAGGGATCTTCCCTAATGCCATAGAAATTTTTGCTGGAAGCAAGAAGTACTTCTTTGCATCCTTTCTGTCTCGCGACGAAGCACTTAAGATAATAAATGATGGATGGTCGGGTGCCAAAGAGTTTAGAGAACAGGATTTGTTATCTGAGACTGGCAGCCAAGAGAATGGAGTTGGAATTGAAAAGGTGGAAAGTTCCCAATTCTTAGTTAATGAAATGGATTCCACTGACAGGAATGGGGATATTCATGTTTCACAAGACTCTAAGCTTGCATCCAGTGTTGTAGACGACTCTGCATTGACGTCAATTCCAGAGCAACACGATATTGTAAAAGAGGATTTAGAACCAGCTCAGAATAGTGACCCTTCGTGTTCGAAAGATACTTTGATCTGGAAAGAGGAAAACTCTGATGCTCCAAATGTTCCAGAGTGTTATACAAAGGTTGCAGAGTCACAGTTTCCGATAAAGGTTGAAGATTTCTTTAGTTTATTTTTCTCTGATGATGTATTCACAGAATCATTTCATAGAAGTTGTGGAGATAAAGAGTTGAAGTGTACTCCATGGAATCCTCATGATAAATTTGGGTTCTCCCGTGATGTTTCCTTTCAGCACCCAATAAAAATTTATTTTGGTGCAAAATTTGGCAGCTGCCAGGAGCTCCAGAAATTTCGGTTTCACAGAAACAGCCACTTAGTTATTGAGACATCACAAGAAATCAACGATGTGCCTTATGGAGATTATTTCCGTGTTGAGGGATTTTGGGACATTGAGAGAGATCCTGATGGATCAAAGGATTGCTGCAATTTGAAGATTTATGTGAATGTGGCATTTTCAAAGAGAACTGTGTGGAAAGGCAAAATAGTGCAGTCTACCATGGAAGAATGTCGAGAAGTTTTTGAAACCTGGATAAACATGGCACATGAATTGTTGAAGAAGAAGAATCTTGAAAAACAAGAAGAGGGGATTCCTGCGGTTACCCGTGTTCAGAAATTTGAAGTTCATCCTCAAATTGAAGCAGAGATGGGTGTACCTGCAGAAAGGTTTTACGAGCCCAGCGAACACACTAGGGTACAACACATGTCTAAATCATTCGATGCAGCCCAGCAAGTTGGGAAGCGGTTGCTGGGAGGTACAGTCGATGTTTCCCCTCTTACATCATGGTTAAGAGAATCTATGCTGAAATTCCAGTCCTCATTGAGAAGTCAAAGCCAGCTTCCGTTAATCATAGTCATCGTTTTTGTTGTGATTTTCATCATGCAGTTGAGCATACTTGCGCTATTAGCTAGACCCCAACACATCCATGTGCAATCGCCTGTGGACTACAGGAGTGGCTTGGGAAGTAAAGTAGGTGAAAGATCATCCGAGGTGGTCGCTTGGCTGGAGAAGCGAATCCACCACCTCAAAGACGAGATGCGCTTGGTTGAGACTCGGCTTGAGAGTATGCAGCATGAACATGCTCTGTTAAAAGCTCAACTCAAGGATATTAATCATCTAAGTAAGCGCAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0010033 GO:0010941 GO:0012505 GO:0014070 GO:0042221 GO:0042493 GO:0042742 GO:0043067 GO:0043069 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0060548 GO:0065007 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4782 GRAM

Protein Analysis

691

Amino Acids

78.46

Weight (kDa)

5.59

Isoelectric Point (pI)

58.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02120 AT1G02120 AT1G02120
fragaria_vesca	FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200
malus_domestica	MD02G1212800.v1.1 MD07G1109200.v1.1
prunus_persica	Prupe.2G131900_v2.0.a1 Prupe.2G131900_v2.0.a1 Prupe.2G131900_v2.0.a1
pyrus_communis	pycom02g17530 pycom07g09350
rosa_chinensis	RchiOBHm_Chr1g0347921
rosa_laevigata	RLG00000003066 RLG00000028703 RLG00000030623
rosa_multiflora	Rmu_co8098638.1_g000001 Rmu_ssc0000342.1_g000013 Rmu_ssc0000342.1_g000014 Rmu_ssc0000342.1_g000015
rosa_roxburghii	Rroxscaffold_4G00307370
rosa_rugosa	Rorug01G0190400
rosa_samantha	Rh1AG208900 Rh1BG173500 Rh1CG193100 Rh1DG203500 Rh2CG347700 Rh4AG404300 Rh4BG415400 Rh5AG377600
rosa_wichuraiana	Rw1G017360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	869
Acc36I	ACCTGC	2 cut(s)	1603, 2058
AccB1I	GGYRCC	1 cut(s)	677
AccI	GTMKAC	3 cut(s)	13, 849, 1433
AccII	CGCG	2 cut(s)	155, 639
AciI	CCGC	8 cut(s)	83, 153, 182, 231, 285, 389, 1535, 1681
AclWI	GGATC	6 cut(s)	176, 194, 207, 578, 1334, 1357
AcoI	YGGCCR	2 cut(s)	141, 147
AcsI	RAATTY	7 cut(s)	591, 1142, 1185, 1202, 1229, 1553, 1745
AcyI	GRCGYC	2 cut(s)	237, 866
AfaI	GTAC	7 cut(s)	461, 549, 614, 1120, 1593, 1635, 1696
AfiI	CCNNNNNNNGG	5 cut(s)	77, 196, 247, 795, 1315
AflII	CTTAAG	1 cut(s)	650
AflIII	ACRYGT	1 cut(s)	1641
AjnI	CCWGG	3 cut(s)	218, 1215, 1466
AluBI	AGCT	8 cut(s)	176, 832, 914, 1212, 1222, 1777, 1847, 2033
AluI	AGCT	8 cut(s)	176, 832, 914, 1212, 1222, 1777, 1847, 2033
Alw21I	GWGCWC	1 cut(s)	1224
Alw26I	GTCTC	6 cut(s)	302, 503, 639, 707, 1259, 1982
AlwI	GGATC	6 cut(s)	176, 194, 207, 578, 1334, 1357
AoxI	GGCC	2 cut(s)	141, 147
ApeKI	GCWGC	8 cut(s)	303, 344, 720, 1209, 1212, 1362, 1661, 2008
ApoI	RAATTY	7 cut(s)	591, 1142, 1185, 1202, 1229, 1553, 1745
AseI	ATTAAT	1 cut(s)	2049
Asp700I	GAANNNNTTC	2 cut(s)	614, 1083
AspLEI	GCGC	3 cut(s)	1840, 1980, 2067
AspS9I	GGNCC	1 cut(s)	80
AsuC2I	CCSGG	1 cut(s)	161
AsuHPI	GGTGA	1 cut(s)	1925
AsuII	TTCGAA	1 cut(s)	938
AvaII	GGWCC	1 cut(s)	80
BalI	TGGCCA	1 cut(s)	149
BamHI	GGATCC	1 cut(s)	199
BanI	GGYRCC	1 cut(s)	677
BanII	GRGCYC	3 cut(s)	161, 1224, 1617
Bbv12I	GWGCWC	1 cut(s)	1224
BbvI	GCAGC	8 cut(s)	315, 356, 732, 1199, 1221, 1349, 1673, 2020
BccI	CCATC	4 cut(s)	659, 663, 1340, 1579
BceAI	ACGGC	2 cut(s)	128, 199
BcgI	CGANNNNNNTGC	2 cut(s)	323, 357
BciT130I	CCWGG	3 cut(s)	220, 1217, 1468
BcnI	CCSGG	1 cut(s)	161
BcoDI	GTCTC	6 cut(s)	302, 503, 639, 707, 1259, 1982
BfaI	CTAG	2 cut(s)	1629, 1848
BfmI	CTRYAG	3 cut(s)	342, 1596, 1885
BfrI	CTTAAG	1 cut(s)	650
BfuAI	ACCTGC	2 cut(s)	1603, 2058
BglI	GCCNNNNNGGC	1 cut(s)	220
BisI	GCNGC	8 cut(s)	304, 345, 721, 1210, 1213, 1363, 1662, 2009
BlsI	GCNGC	8 cut(s)	305, 346, 722, 1211, 1214, 1364, 1663, 2010
BmcAI	AGTACT	1 cut(s)	614
Bme1390I	CCNGG	4 cut(s)	161, 220, 1217, 1468
Bme18I	GGWCC	1 cut(s)	80
BmgT120I	GGNCC	1 cut(s)	80
BmiI	GGNNCC	2 cut(s)	201, 679
BmrFI	CCNGG	4 cut(s)	161, 220, 1217, 1468
BmsI	GCATC	6 cut(s)	356, 632, 845, 964, 1648, 1965
BplI	GAGNNNNNCTC	2 cut(s)	953, 985
BpmI	CTGGAG	2 cut(s)	1208, 1964
Bpu14I	TTCGAA	1 cut(s)	938
BpuEI	CTTGAG	2 cut(s)	2018, 2024
BpuMI	CCSGG	1 cut(s)	161
BsaBI	GATNNNNATC	2 cut(s)	1814, 2049
BsaHI	GRCGYC	2 cut(s)	237, 866
BsaJI	CCNNGG	5 cut(s)	144, 246, 1124, 1437, 1926
BsaXI	ACNNNNNCTCC	6 cut(s)	6, 36, 227, 257, 1683, 1713
Bsc4I	CCNNNNNNNGG	5 cut(s)	77, 196, 247, 795, 1315
Bse1I	ACTGG	4 cut(s)	373, 721, 840, 1750
Bse8I	GATNNNNATC	2 cut(s)	1814, 2049
BseBI	CCWGG	3 cut(s)	220, 1217, 1468
BseDI	CCNNGG	5 cut(s)	144, 246, 1124, 1437, 1926
BseGI	GGATG	6 cut(s)	623, 674, 836, 1564, 1860, 1922
BseJI	GATNNNNATC	2 cut(s)	1814, 2049
BseLI	CCNNNNNNNGG	5 cut(s)	77, 196, 247, 795, 1315
BseMII	CTCAG	2 cut(s)	702, 929
BseNI	ACTGG	4 cut(s)	373, 721, 840, 1750
BseRI	GAGGAG	3 cut(s)	168, 250, 253
BseXI	GCAGC	8 cut(s)	315, 356, 732, 1199, 1221, 1349, 1673, 2020
BseYI	CCCAGC	3 cut(s)	1616, 1665, 1687
BsgI	GTGCAG	1 cut(s)	1448
Bsh1236I	CGCG	2 cut(s)	155, 639
BshFI	GGCC	2 cut(s)	143, 149
BshNI	GGYRCC	1 cut(s)	677
BsiHKAI	GWGCWC	1 cut(s)	1224
BsiSI	CCGG	1 cut(s)	161
BslFI	GGGAC	1 cut(s)	1340
BslI	CCNNNNNNNGG	5 cut(s)	77, 196, 247, 795, 1315
BsmAI	GTCTC	6 cut(s)	302, 503, 639, 707, 1259, 1982
BsmFI	GGGAC	1 cut(s)	1340
BsmI	GAATGC	1 cut(s)	425
BsnI	GGCC	2 cut(s)	143, 149
Bsp119I	TTCGAA	1 cut(s)	938
Bsp1286I	GDGCHC	3 cut(s)	161, 1224, 1617
Bsp143I	GATC	7 cut(s)	168, 199, 570, 951, 1339, 1349, 1919
Bsp19I	CCATGG	2 cut(s)	1124, 1437
Bsp68I	TCGCGA	1 cut(s)	639
BspACI	CCGC	8 cut(s)	83, 153, 182, 231, 285, 389, 1535, 1681
BspANI	GGCC	2 cut(s)	143, 149
BspCNI	CTCAG	2 cut(s)	703, 928
BspFNI	CGCG	2 cut(s)	155, 639
BspHI	TCATGA	1 cut(s)	1135
BspLI	GGNNCC	2 cut(s)	201, 679
BspMAI	CTGCAG	2 cut(s)	346, 1600
BspMI	ACCTGC	2 cut(s)	1603, 2058
BspPI	GGATC	6 cut(s)	176, 194, 207, 578, 1334, 1357
BspQI	GCTCTTC	1 cut(s)	547
BspT104I	TTCGAA	1 cut(s)	938
BspT107I	GGYRCC	1 cut(s)	677
BspTI	CTTAAG	1 cut(s)	650
BsrI	ACTGG	4 cut(s)	373, 721, 840, 1750
BssECI	CCNNGG	5 cut(s)	144, 246, 1124, 1437, 1926
BssMI	GATC	7 cut(s)	168, 199, 570, 951, 1339, 1349, 1919
BssNI	GRCGYC	2 cut(s)	237, 866
BssT1I	CCWWGG	2 cut(s)	1124, 1437
Bst2UI	CCWGG	3 cut(s)	220, 1217, 1468
Bst4CI	ACNGT	4 cut(s)	422, 1020, 1408, 1699
Bst6I	CTCTTC	5 cut(s)	276, 350, 357, 547, 1515
BstACI	GRCGYC	2 cut(s)	237, 866
BstAFI	CTTAAG	1 cut(s)	650
BstBI	TTCGAA	1 cut(s)	938
BstC8I	GCNNGC	3 cut(s)	157, 834, 1775
BstDEI	CTNAG	6 cut(s)	711, 769, 828, 915, 1255, 2057
BstDSI	CCRYGG	3 cut(s)	144, 1124, 1437
BstEII	GGTNACC	1 cut(s)	1537
BstF5I	GGATG	6 cut(s)	623, 674, 836, 1564, 1860, 1922
BstFNI	CGCG	2 cut(s)	155, 639
BstHHI	GCGC	3 cut(s)	1840, 1980, 2067
BstKTI	GATC	7 cut(s)	171, 202, 573, 954, 1342, 1352, 1922
BstMAI	GTCTC	6 cut(s)	302, 503, 639, 707, 1259, 1982
BstMBI	GATC	7 cut(s)	168, 199, 570, 951, 1339, 1349, 1919
BstMWI	GCNNNNNNNGC	5 cut(s)	220, 312, 563, 1844, 1948
BstNI	CCWGG	3 cut(s)	220, 1217, 1468
BstNSI	RCATGY	2 cut(s)	1645, 2021
BstPI	GGTNACC	1 cut(s)	1537
BstSCI	CCNGG	4 cut(s)	159, 218, 1215, 1466
BstSFI	CTRYAG	3 cut(s)	342, 1596, 1885
BstUI	CGCG	2 cut(s)	155, 639
BstV1I	GCAGC	8 cut(s)	315, 356, 732, 1199, 1221, 1349, 1673, 2020
BstX2I	RGATCY	3 cut(s)	199, 570, 1339
BstXI	CCANNNNNNTGG	2 cut(s)	731, 1673
BstYI	RGATCY	3 cut(s)	199, 570, 1339
BsuRI	GGCC	2 cut(s)	143, 149
BtgI	CCRYGG	3 cut(s)	144, 1124, 1437
BtsCI	GGATG	6 cut(s)	623, 674, 836, 1564, 1860, 1922
BtsI	GCAGTG	1 cut(s)	327
BtsIMutI	CAGTG	3 cut(s)	327, 789, 847
BtuMI	TCGCGA	1 cut(s)	639
BveI	ACCTGC	2 cut(s)	1603, 2058
Cac8I	GCNNGC	3 cut(s)	157, 834, 1775
CciI	TCATGA	1 cut(s)	1135
CfoI	GCGC	3 cut(s)	1840, 1980, 2067
Cfr13I	GGNCC	1 cut(s)	80
CseI	GACGC	2 cut(s)	62, 245
Csp6I	GTAC	7 cut(s)	460, 548, 613, 1119, 1592, 1634, 1695
CviQI	GTAC	7 cut(s)	460, 548, 613, 1119, 1592, 1634, 1695
DdeI	CTNAG	6 cut(s)	711, 769, 828, 915, 1255, 2057
DpnI	GATC	7 cut(s)	170, 201, 572, 953, 1341, 1351, 1921
DpnII	GATC	7 cut(s)	168, 199, 570, 951, 1339, 1349, 1919
EaeI	YGGCCR	2 cut(s)	141, 147
Eam1104I	CTCTTC	5 cut(s)	276, 350, 357, 547, 1515
EarI	CTCTTC	5 cut(s)	276, 350, 357, 547, 1515
EciI	GGCGGA	2 cut(s)	274, 378
Ecl136II	GAGCTC	1 cut(s)	1222
Eco130I	CCWWGG	2 cut(s)	1124, 1437
Eco24I	GRGCYC	3 cut(s)	161, 1224, 1617
Eco47I	GGWCC	1 cut(s)	80
Eco53kI	GAGCTC	1 cut(s)	1222
Eco91I	GGTNACC	1 cut(s)	1537
EcoICRI	GAGCTC	1 cut(s)	1222
EcoO65I	GGTNACC	1 cut(s)	1537
EcoRII	CCWGG	3 cut(s)	218, 1215, 1466
EcoT14I	CCWWGG	2 cut(s)	1124, 1437
EcoT38I	GRGCYC	3 cut(s)	161, 1224, 1617
ErhI	CCWWGG	2 cut(s)	1124, 1437
FalI	AAGNNNNNCTT	4 cut(s)	599, 631, 602, 634
FaqI	GGGAC	1 cut(s)	1340
FauNDI	CATATG	1 cut(s)	456
FblI	GTMKAC	3 cut(s)	13, 849, 1433
Fnu4HI	GCNGC	8 cut(s)	304, 345, 721, 1210, 1213, 1363, 1662, 2009
FokI	GGATG	6 cut(s)	610, 681, 823, 1551, 1847, 1909
FriOI	GRGCYC	3 cut(s)	161, 1224, 1617
Fsp4HI	GCNGC	8 cut(s)	304, 345, 721, 1210, 1213, 1363, 1662, 2009
FspBI	CTAG	2 cut(s)	1629, 1848
GlaI	GCGC	3 cut(s)	1839, 1979, 2066
GluI	GCNGC	8 cut(s)	304, 345, 721, 1210, 1213, 1363, 1662, 2009
GsaI	CCCAGC	3 cut(s)	1620, 1669, 1691
GsuI	CTGGAG	2 cut(s)	1208, 1964
HaeIII	GGCC	2 cut(s)	143, 149
HapII	CCGG	1 cut(s)	161
HgaI	GACGC	2 cut(s)	62, 245
HhaI	GCGC	3 cut(s)	1840, 1980, 2067
Hin1I	GRCGYC	2 cut(s)	237, 866
Hin6I	GCGC	3 cut(s)	1838, 1978, 2065
HinP1I	GCGC	3 cut(s)	1838, 1978, 2065
HincII	GTYRAC	1 cut(s)	14
HindII	GTYRAC	1 cut(s)	14
HindIII	AAGCTT	1 cut(s)	830
HpaII	CCGG	1 cut(s)	161
HphI	GGTGA	1 cut(s)	1925
Hpy166II	GTNNAC	7 cut(s)	14, 548, 850, 1119, 1434, 1592, 1882
Hpy188I	TCNGA	8 cut(s)	247, 712, 918, 973, 1026, 1063, 1551, 1927
Hpy188III	TCNNGA	9 cut(s)	638, 875, 955, 989, 1136, 1225, 1343, 1451, 1508
Hpy8I	GTNNAC	7 cut(s)	14, 548, 850, 1119, 1434, 1592, 1882
Hpy99I	CGWCG	3 cut(s)	56, 239, 644
HpyAV	CCTTC	3 cut(s)	107, 395, 939
HpyCH4III	ACNGT	4 cut(s)	422, 1020, 1408, 1699
HpyCH4IV	ACGT	2 cut(s)	129, 866
HpyF10VI	GCNNNNNNNGC	5 cut(s)	220, 312, 563, 1844, 1948
HpyF3I	CTNAG	6 cut(s)	711, 769, 828, 915, 1255, 2057
HpySE526I	ACGT	2 cut(s)	129, 866
Hsp92I	GRCGYC	2 cut(s)	237, 866
HspAI	GCGC	3 cut(s)	1838, 1978, 2065
Kzo9I	GATC	7 cut(s)	168, 199, 570, 951, 1339, 1349, 1919
LguI	GCTCTTC	1 cut(s)	547
LmnI	GCTCC	5 cut(s)	181, 263, 982, 1219, 1227
Lsp1109I	GCAGC	8 cut(s)	315, 356, 732, 1199, 1221, 1349, 1673, 2020
LweI	GCATC	6 cut(s)	356, 632, 845, 964, 1648, 1965
MaeI	CTAG	2 cut(s)	1629, 1848
MaeII	ACGT	2 cut(s)	129, 866
MaeIII	GTNAC	4 cut(s)	538, 923, 1014, 1537
MalI	GATC	7 cut(s)	170, 201, 572, 953, 1341, 1351, 1921
MboI	GATC	7 cut(s)	168, 199, 570, 951, 1339, 1349, 1919
MflI	RGATCY	3 cut(s)	199, 570, 1339
MhlI	GDGCHC	3 cut(s)	161, 1224, 1617
MlsI	TGGCCA	1 cut(s)	149
MluNI	TGGCCA	1 cut(s)	149
MlyI	GAGTC	6 cut(s)	304, 347, 818, 848, 1022, 1984
MmeI	TCCRAC	1 cut(s)	718
Mox20I	TGGCCA	1 cut(s)	149
MroXI	GAANNNNTTC	2 cut(s)	614, 1083
MscI	TGGCCA	1 cut(s)	149
MseI	TTAA	6 cut(s)	651, 774, 1727, 1784, 2027, 2049
MslI	CAYNNNNRTG	4 cut(s)	143, 1863, 1865, 2016
Msp20I	TGGCCA	1 cut(s)	149
MspA1I	CMGCKG	1 cut(s)	1212
MspCI	CTTAAG	1 cut(s)	650
MspI	CCGG	1 cut(s)	161
MspR9I	CCNGG	4 cut(s)	161, 220, 1217, 1468
Mva1269I	GAATGC	1 cut(s)	425
MvaI	CCWGG	3 cut(s)	220, 1217, 1468
MvnI	CGCG	2 cut(s)	155, 639
MwoI	GCNNNNNNNGC	5 cut(s)	220, 312, 563, 1844, 1948
NciI	CCSGG	1 cut(s)	161
NcoI	CCATGG	2 cut(s)	1124, 1437
NdeI	CATATG	1 cut(s)	456
NdeII	GATC	7 cut(s)	168, 199, 570, 951, 1339, 1349, 1919
NlaIV	GGNNCC	2 cut(s)	201, 679
NmeAIII	GCCGAG	1 cut(s)	1972
NmuCI	GTSAC	3 cut(s)	538, 923, 1014
NruI	TCGCGA	1 cut(s)	639
NspI	RCATGY	2 cut(s)	1645, 2021
NspV	TTCGAA	1 cut(s)	938
PagI	TCATGA	1 cut(s)	1135
PciI	ACATGT	1 cut(s)	1641
PciSI	GCTCTTC	1 cut(s)	547
PcsI	WCGNNNNNNNCGW	3 cut(s)	212, 243, 1617
PctI	GAATGC	1 cut(s)	425
PdmI	GAANNNNTTC	2 cut(s)	614, 1083
PfeI	GAWTC	7 cut(s)	785, 1079, 1129, 1504, 1528, 1733, 1953
PkrI	GCNGC	8 cut(s)	305, 346, 722, 1211, 1214, 1364, 1663, 2010
PleI	GAGTC	6 cut(s)	304, 346, 818, 848, 1021, 1984
PpsI	GAGTC	6 cut(s)	304, 346, 818, 848, 1021, 1984
PscI	ACATGT	1 cut(s)	1641
PshBI	ATTAAT	1 cut(s)	2049
Psp124BI	GAGCTC	1 cut(s)	1224
Psp6I	CCWGG	3 cut(s)	218, 1215, 1466
PspEI	GGTNACC	1 cut(s)	1537
PspFI	CCCAGC	3 cut(s)	1616, 1665, 1687
PspGI	CCWGG	3 cut(s)	218, 1215, 1466
PspN4I	GGNNCC	2 cut(s)	201, 679
PspPI	GGNCC	1 cut(s)	80
PstI	CTGCAG	2 cut(s)	346, 1600
PsuI	RGATCY	3 cut(s)	199, 570, 1339
PvuII	CAGCTG	1 cut(s)	1212
RruI	TCGCGA	1 cut(s)	639
RsaI	GTAC	7 cut(s)	461, 549, 614, 1120, 1593, 1635, 1696
RsaNI	GTAC	7 cut(s)	460, 548, 613, 1119, 1592, 1634, 1695
RseI	CAYNNNNRTG	4 cut(s)	143, 1863, 1865, 2016
SacI	GAGCTC	1 cut(s)	1224
SalI	GTCGAC	1 cut(s)	12
SapI	GCTCTTC	1 cut(s)	547
SaqAI	TTAA	6 cut(s)	651, 774, 1727, 1784, 2027, 2049
SatI	GCNGC	8 cut(s)	304, 345, 721, 1210, 1213, 1363, 1662, 2009
Sau3AI	GATC	7 cut(s)	168, 199, 570, 951, 1339, 1349, 1919
Sau96I	GGNCC	1 cut(s)	80
ScaI	AGTACT	1 cut(s)	614
SchI	GAGTC	6 cut(s)	304, 347, 818, 848, 1022, 1984
ScrFI	CCNGG	4 cut(s)	161, 220, 1217, 1468
SduI	GDGCHC	3 cut(s)	161, 1224, 1617
SfaNI	GCATC	6 cut(s)	356, 632, 845, 964, 1648, 1965
SfcI	CTRYAG	3 cut(s)	342, 1596, 1885
SfuI	TTCGAA	1 cut(s)	938
SinI	GGWCC	1 cut(s)	80
SmiMI	CAYNNNNRTG	4 cut(s)	143, 1863, 1865, 2016
SmlI	CTYRAG	3 cut(s)	650, 1997, 2039
SmoI	CTYRAG	3 cut(s)	650, 1997, 2039
SsiI	CCGC	8 cut(s)	83, 153, 182, 231, 285, 389, 1535, 1681
SspMI	CTAG	2 cut(s)	1629, 1848
SstI	GAGCTC	1 cut(s)	1224
StyD4I	CCNGG	4 cut(s)	159, 218, 1215, 1466
StyI	CCWWGG	2 cut(s)	1124, 1437
TaaI	ACNGT	4 cut(s)	422, 1020, 1408, 1699
TaiI	ACGT	2 cut(s)	132, 869
TaqI	TCGA	7 cut(s)	13, 171, 408, 938, 1450, 1656, 1701
TatI	WGTACW	2 cut(s)	612, 1118
TfiI	GAWTC	7 cut(s)	785, 1079, 1129, 1504, 1528, 1733, 1953
Tru1I	TTAA	6 cut(s)	651, 774, 1727, 1784, 2027, 2049
Tru9I	TTAA	6 cut(s)	651, 774, 1727, 1784, 2027, 2049
TscAI	CASTG	3 cut(s)	334, 796, 847
TseFI	GTSAC	3 cut(s)	538, 923, 1014
TseI	GCWGC	8 cut(s)	303, 344, 720, 1209, 1212, 1362, 1661, 2008
Tsp45I	GTSAC	3 cut(s)	538, 923, 1014
TspDTI	ATGAA	9 cut(s)	411, 461, 792, 800, 1076, 1500, 1553, 1804, 2028
TspGWI	ACGGA	2 cut(s)	1298, 1770
TspRI	CASTG	3 cut(s)	334, 796, 847
Vha464I	CTTAAG	1 cut(s)	650
VpaK11BI	GGWCC	1 cut(s)	80
VspI	ATTAAT	1 cut(s)	2049
XapI	RAATTY	7 cut(s)	591, 1142, 1185, 1202, 1229, 1553, 1745
XceI	RCATGY	2 cut(s)	1645, 2021
XmiI	GTMKAC	3 cut(s)	13, 849, 1433
XmnI	GAANNNNTTC	2 cut(s)	614, 1083
XspI	CTAG	2 cut(s)	1629, 1848
ZraI	GACGTC	1 cut(s)	867
ZrmI	AGTACT	1 cut(s)	614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.