Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0001821

Physical Location & Seq

Genomic Coordinates Reverse (-)

28644115 .. 28652870

Gene Structure 8756 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00307370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

ATGGCCGTGGCCTCCGCCTCCCCCTCCCCCGACAGGATCCCAGTCACGCCCCAGCAGCAGCAGCACCCCGTCATCGAGCCCTCGCCGTCCAGATTCTCCACCGACTCCGACGCGGCCTCGTCCTCACCGCTCGTCTCCTGCTCGGCCGACACACCTGATCGCTCCGATTCTTCCTTTGCTTCTCCCAACACCGATCAGTCTGCTGCAAGATTGAGGAGTGAAGAGTATCGGCAGTTGTTTCGGCTTCCAGCTGAAGAAGCCCTCATCGAAGATTTCAATTGTGCATTCCAGGAGAATATACTTATTCAGGGTCATATGTACCTGTTTGTTCATTATATTTGCTTTTACTCAAATATATTTGGATATGAGACAAAGAAAATAATCCCCTTCCAGGAAGTCACATGCGTAAGAAGGGCGAAGACAGCAGGGATCTTTCCTAATGCAATAGAAATTTTTGTTGGAGACAAGAAGTACTTCTTTGCGTCCTTTCTGTCCCGTGATGAAGCTTACAGAATCATAAATGATGGTTGGGCGCTATATGTTGATGGTGCCAAAGTGACTACAGAACAACAGGAATCAATCACTGAGACTAAAAACCAAGAGAATGGAGTCGTAATTGAAAAAGTTGAGAGCTCCAATTGCTTAGTTAATGAATTGGATTCTACTGAAAGGAACACTGATACTCAAATTTCAAAGGATTCTGAGCTCCCACCCAAAGTTGAAGACGATTCTGTGTTTACATCGCTTCCAGAGCCCAAAGGTGTTGTCGAAGAGGATATAGAACCAGTTCTGAATGGTGAACCTTCATCTTCAAGAGATACCTTGATATGGAAGGAAGAAGATTCTGATGCCCCAAACGTTCCAGAATTTTATACAAAGGTTGCAGAGTCGCAGTTTCCGATAAAGGTTGAAGATTTCTTTAGTTTCTTTTACTCAGATGATGTGTTCATTGAATCATTCCATAACAGTTGTGGAGATAAAGAGTTCAGCTGCACTTCATGGCAGCCTCATGAAAAGTTTGGACATACCCGCGATGTTTCATTTCAGCATCCAATTAAAATCTACTTTGGTGCAAAATTTGGTAGCTGTAAGGAGCTCCAGAAATTTCGAGTACACAGAAACAGTCATTTAGTTATTGAGACATCACAAGAGATCAACGATGTGCCTTATGGAGATTATTTCCGGGTTGAGGGGCTTTGGAAGGTGGAGAGAGATACTGATGGATCAAAGGAATGCTGCAATTTGAAGATTTACTTGAATGTGGCATTTTCAAAAAGAACTGTTTGGAAAGGAAAGATAGTGCAGTCTACCTTGGAAGAATGTCGAGAGGTTTATGCTACCTGGATAAACATGGCACATGAATTGTTGAAGACAAAGAACCTTGAGAAACAAGCAGAGAGTATTCCTACAGTTAGCATGGTTCAGAAATGTGAAGTTCATCCTACAGAGGAAGCAGAGACGGTTCAGTCTTCTGAAAAGTTTTACGAGCCTAGTGATCACACTAGGATACAACAGATATCTGCATCCATAAACCCTAAGCACAAAGTTAGCAGTCTATTTCAAGAAAGTCGGAGTGATACTTACTCTCTTACCTCATGGTTGAGAGATTATATGATGAAATTCGGTTCATCCTTGAGGAATCAAAGCCATCTTCCATTGATCATAGTTATCATTGTTGCCGTGGTTTTCATAATGCAGTTGAGCATACTTGCACTACTAGCTAGACCCCAACACATCCATGTGCACTCTCCTGTGGACTATACAAGTGTCATGGGCAGTGGTGTTGGTGGGAGATCTTCTGAAGTTATTACTTGGCTGGAGAAGCGAGTTCACAACCTTAAAGACGAGATGAACTTGGTTGAAGCTCGGCTTGAGAGCATGCGACATGAACATGCTCTCCTAAAAGCTCAACTTGAAGATTTCAAGCATCTTATTAAGCGTAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0010033 GO:0010941 GO:0012505 GO:0014070 GO:0042221 GO:0042493 GO:0042742 GO:0043067 GO:0043069 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0060548 GO:0065007 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4782 GRAM

Protein Analysis

648

Amino Acids

73.95

Weight (kDa)

5.33

Isoelectric Point (pI)

60.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAM	PF02893	76 - 177	2.2e-24	GRAM domain
VASt	PF16016	294 - 439	6.6e-35	VAD1 Analog of StAR-related lipid transfer domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02120 AT1G02120 AT1G02120
fragaria_vesca	FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200
malus_domestica	MD02G1212800.v1.1 MD07G1109200.v1.1
prunus_persica	Prupe.2G131900_v2.0.a1 Prupe.2G131900_v2.0.a1 Prupe.2G131900_v2.0.a1
pyrus_communis	pycom02g17530 pycom07g09350
rosa_chinensis	RchiOBHm_Chr1g0347921
rosa_laevigata	RLG00000003066 RLG00000028703 RLG00000030623
rosa_multiflora	Rmu_co8098638.1_g000001 Rmu_ssc0000342.1_g000013 Rmu_ssc0000342.1_g000014 Rmu_ssc0000342.1_g000015
rosa_roxburghii	Rroxscaffold_4G00307370
rosa_rugosa	Rorug01G0190400
rosa_samantha	Rh1AG208900 Rh1BG173500 Rh1CG193100 Rh1DG203500 Rh2CG347700 Rh4AG404300 Rh4BG415400 Rh5AG377600
rosa_wichuraiana	Rw1G017360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1465
AccB1I	GGYRCC	1 cut(s)	548
AccBSI	CCGCTC	1 cut(s)	130
AccI	GTMKAC	1 cut(s)	1307
AccII	CGCG	2 cut(s)	113, 1032
AciI	CCGC	4 cut(s)	15, 113, 128, 1030
AclI	AACGTT	1 cut(s)	858
AclWI	GGATC	4 cut(s)	31, 44, 437, 1231
AcoI	YGGCCR	2 cut(s)	3, 144
AcsI	RAATTY	6 cut(s)	450, 687, 866, 1076, 1103, 1619
AcuI	CTGAAG	2 cut(s)	273, 1821
AfaI	GTAC	3 cut(s)	320, 473, 1113
AfiI	CCNNNNNNNGG	4 cut(s)	33, 391, 828, 1189
AjnI	CCWGG	3 cut(s)	288, 390, 1340
AjuI	GAANNNNNNNTTGG	2 cut(s)	441, 473
AloI	GAACNNNNNNTCC	2 cut(s)	1881, 1913
Alw21I	GWGCWC	4 cut(s)	635, 708, 1098, 1746
Alw26I	GTCTC	6 cut(s)	139, 362, 456, 581, 1133, 1451
Alw44I	GTGCAC	1 cut(s)	1742
AlwI	GGATC	4 cut(s)	31, 44, 437, 1231
AoxI	GGCC	4 cut(s)	3, 9, 114, 144
ApaLI	GTGCAC	1 cut(s)	1742
ApeKI	GCWGC	7 cut(s)	55, 58, 61, 203, 990, 1003, 1236
ApoI	RAATTY	6 cut(s)	450, 687, 866, 1076, 1103, 1619
ArsI	GACNNNNNNTTYG	2 cut(s)	750, 782
Asp700I	GAANNNNTTC	2 cut(s)	473, 786
AspLEI	GCGC	1 cut(s)	535
AsuC2I	CCSGG	1 cut(s)	1184
AsuHPI	GGTGA	2 cut(s)	117, 809
BaeGI	GKGCMC	1 cut(s)	1746
BamHI	GGATCC	1 cut(s)	36
BanI	GGYRCC	1 cut(s)	548
BanII	GRGCYC	5 cut(s)	81, 635, 708, 756, 1098
BbsI	GAAGAC	4 cut(s)	425, 729, 1376, 1461
Bbv12I	GWGCWC	4 cut(s)	635, 708, 1098, 1746
BbvI	GCAGC	7 cut(s)	67, 70, 73, 190, 977, 1015, 1223
BccI	CCATC	4 cut(s)	518, 539, 1214, 1656
BceAI	ACGGC	2 cut(s)	70, 1664
BcgI	CGANNNNNNTGC	4 cut(s)	182, 216, 221, 255
BciT130I	CCWGG	3 cut(s)	290, 392, 1342
BciVI	GTATCC	1 cut(s)	1500
BclI	TGATCA	2 cut(s)	1495, 1659
BcnI	CCSGG	1 cut(s)	1184
BcoDI	GTCTC	6 cut(s)	139, 362, 456, 581, 1133, 1451
BfaI	CTAG	4 cut(s)	1491, 1503, 1718, 1722
BfmI	CTRYAG	3 cut(s)	561, 1407, 1443
BfoI	RGCGCY	1 cut(s)	536
BfuI	GTATCC	1 cut(s)	1500
BglII	AGATCT	1 cut(s)	1793
BisI	GCNGC	8 cut(s)	56, 59, 62, 114, 204, 991, 1004, 1237
BlsI	GCNGC	8 cut(s)	57, 60, 63, 115, 205, 992, 1005, 1238
BmcAI	AGTACT	1 cut(s)	473
Bme1390I	CCNGG	4 cut(s)	290, 392, 1184, 1342
BmiI	GGNNCC	2 cut(s)	38, 550
BmrFI	CCNGG	4 cut(s)	290, 392, 1184, 1342
BmrI	ACTGGG	1 cut(s)	35
BmsI	GCATC	4 cut(s)	838, 1057, 1532, 1936
BmuI	ACTGGG	1 cut(s)	35
BpiI	GAAGAC	4 cut(s)	425, 729, 1376, 1461
BpmI	CTGGAG	2 cut(s)	1082, 1838
Bpu10I	CCTNAGC	1 cut(s)	1536
BpuEI	CTTGAG	3 cut(s)	1403, 1654, 1892
BpuMI	CCSGG	1 cut(s)	1184
BsaJI	CCNNGG	3 cut(s)	6, 1311, 1680
BsaXI	ACNNNNNCTCC	2 cut(s)	1881, 1911
Bsc4I	CCNNNNNNNGG	4 cut(s)	33, 391, 828, 1189
Bse1I	ACTGG	2 cut(s)	41, 785
BseBI	CCWGG	3 cut(s)	290, 392, 1342
BseDI	CCNNGG	3 cut(s)	6, 1311, 1680
BseGI	GGATG	5 cut(s)	1048, 1438, 1523, 1628, 1734
BseLI	CCNNNNNNNGG	4 cut(s)	33, 391, 828, 1189
BseMII	CTCAG	3 cut(s)	576, 693, 948
BseNI	ACTGG	2 cut(s)	41, 785
BseRI	GAGGAG	1 cut(s)	229
BseSI	GKGCMC	1 cut(s)	1746
BseX3I	CGGCCG	1 cut(s)	144
BseXI	GCAGC	7 cut(s)	67, 70, 73, 190, 977, 1015, 1223
BseYI	CCCAGC	1 cut(s)	51
BsgI	GTGCAG	2 cut(s)	976, 1322
Bsh1236I	CGCG	2 cut(s)	113, 1032
Bsh1285I	CGRYCG	1 cut(s)	147
BshFI	GGCC	4 cut(s)	5, 11, 116, 146
BshNI	GGYRCC	1 cut(s)	548
BsiEI	CGRYCG	1 cut(s)	147
BsiHKAI	GWGCWC	4 cut(s)	635, 708, 1098, 1746
BsiSI	CCGG	1 cut(s)	1183
BslFI	GGGAC	1 cut(s)	478
BslI	CCNNNNNNNGG	4 cut(s)	33, 391, 828, 1189
BsmAI	GTCTC	6 cut(s)	139, 362, 456, 581, 1133, 1451
BsmBI	CGTCTC	2 cut(s)	139, 1451
BsmFI	GGGAC	1 cut(s)	478
BsmI	GAATGC	2 cut(s)	284, 1238
BsnI	GGCC	4 cut(s)	5, 11, 116, 146
Bsp1286I	GDGCHC	6 cut(s)	81, 635, 708, 756, 1098, 1746
Bsp143I	GATC	9 cut(s)	36, 157, 193, 429, 1152, 1223, 1495, 1659, 1793
BspACI	CCGC	4 cut(s)	15, 113, 128, 1030
BspANI	GGCC	4 cut(s)	5, 11, 116, 146
BspCNI	CTCAG	3 cut(s)	577, 694, 947
BspFNI	CGCG	2 cut(s)	113, 1032
BspHI	TCATGA	1 cut(s)	1009
BspLI	GGNNCC	2 cut(s)	38, 550
BspPI	GGATC	4 cut(s)	31, 44, 437, 1231
BspT107I	GGYRCC	1 cut(s)	548
BsrBI	CCGCTC	1 cut(s)	130
BsrI	ACTGG	2 cut(s)	41, 785
BssECI	CCNNGG	3 cut(s)	6, 1311, 1680
BssMI	GATC	9 cut(s)	36, 157, 193, 429, 1152, 1223, 1495, 1659, 1793
BssT1I	CCWWGG	1 cut(s)	1311
Bst2UI	CCWGG	3 cut(s)	290, 392, 1342
Bst4CI	ACNGT	5 cut(s)	968, 1124, 1282, 1411, 1462
Bst6I	CTCTTC	2 cut(s)	216, 765
BstC8I	GCNNGC	1 cut(s)	1880
BstDEI	CTNAG	5 cut(s)	585, 643, 702, 934, 1536
BstDSI	CCRYGG	2 cut(s)	6, 1680
BstF5I	GGATG	5 cut(s)	1048, 1438, 1523, 1628, 1734
BstFNI	CGCG	2 cut(s)	113, 1032
BstH2I	RGCGCY	1 cut(s)	536
BstHHI	GCGC	1 cut(s)	535
BstKTI	GATC	9 cut(s)	39, 160, 196, 432, 1155, 1226, 1498, 1662, 1796
BstMAI	GTCTC	6 cut(s)	139, 362, 456, 581, 1133, 1451
BstMBI	GATC	9 cut(s)	36, 157, 193, 429, 1152, 1223, 1495, 1659, 1793
BstMCI	CGRYCG	1 cut(s)	147
BstMWI	GCNNNNNNNGC	8 cut(s)	55, 61, 257, 422, 639, 751, 1718, 1822
BstNI	CCWGG	3 cut(s)	290, 392, 1342
BstNSI	RCATGY	3 cut(s)	405, 1882, 1895
BstSCI	CCNGG	4 cut(s)	288, 390, 1182, 1340
BstSFI	CTRYAG	3 cut(s)	561, 1407, 1443
BstSLI	GKGCMC	1 cut(s)	1746
BstUI	CGCG	2 cut(s)	113, 1032
BstV1I	GCAGC	7 cut(s)	67, 70, 73, 190, 977, 1015, 1223
BstV2I	GAAGAC	4 cut(s)	425, 729, 1376, 1461
BstX2I	RGATCY	3 cut(s)	36, 429, 1793
BstXI	CCANNNNNNTGG	1 cut(s)	605
BstYI	RGATCY	3 cut(s)	36, 429, 1793
BstZI	CGGCCG	1 cut(s)	144
BsuI	GTATCC	1 cut(s)	1500
BsuRI	GGCC	4 cut(s)	5, 11, 116, 146
BtgI	CCRYGG	2 cut(s)	6, 1680
BtgZI	GCGATG	2 cut(s)	726, 1047
BtsCI	GGATG	5 cut(s)	1048, 1438, 1523, 1628, 1734
BtsI	GCAGTG	1 cut(s)	1783
BtsIMutI	CAGTG	3 cut(s)	582, 675, 1783
Cac8I	GCNNGC	1 cut(s)	1880
CciI	TCATGA	1 cut(s)	1009
CfoI	GCGC	1 cut(s)	535
CseI	GACGC	2 cut(s)	119, 471
Csp6I	GTAC	3 cut(s)	319, 472, 1112
CviQI	GTAC	3 cut(s)	319, 472, 1112
DdeI	CTNAG	5 cut(s)	585, 643, 702, 934, 1536
DpnI	GATC	9 cut(s)	38, 159, 195, 431, 1154, 1225, 1497, 1661, 1795
DpnII	GATC	9 cut(s)	36, 157, 193, 429, 1152, 1223, 1495, 1659, 1793
DrdI	GACNNNNNNGTC	1 cut(s)	1465
DseDI	GACNNNNNNGTC	1 cut(s)	1465
EaeI	YGGCCR	2 cut(s)	3, 144
EagI	CGGCCG	1 cut(s)	144
Eam1104I	CTCTTC	2 cut(s)	216, 765
EarI	CTCTTC	2 cut(s)	216, 765
EciI	GGCGGA	1 cut(s)	4
Ecl136II	GAGCTC	3 cut(s)	633, 706, 1096
EclXI	CGGCCG	1 cut(s)	144
Eco130I	CCWWGG	1 cut(s)	1311
Eco24I	GRGCYC	5 cut(s)	81, 635, 708, 756, 1098
Eco32I	GATATC	1 cut(s)	1518
Eco52I	CGGCCG	1 cut(s)	144
Eco53kI	GAGCTC	3 cut(s)	633, 706, 1096
Eco57I	CTGAAG	2 cut(s)	273, 1821
EcoICRI	GAGCTC	3 cut(s)	633, 706, 1096
EcoRII	CCWGG	3 cut(s)	288, 390, 1340
EcoRV	GATATC	1 cut(s)	1518
EcoT14I	CCWWGG	1 cut(s)	1311
EcoT38I	GRGCYC	5 cut(s)	81, 635, 708, 756, 1098
ErhI	CCWWGG	1 cut(s)	1311
Esp3I	CGTCTC	2 cut(s)	139, 1451
FaqI	GGGAC	1 cut(s)	478
FauI	CCCGC	1 cut(s)	1037
FauNDI	CATATG	1 cut(s)	315
FbaI	TGATCA	2 cut(s)	1495, 1659
FblI	GTMKAC	1 cut(s)	1307
Fnu4HI	GCNGC	8 cut(s)	56, 59, 62, 114, 204, 991, 1004, 1237
FokI	GGATG	5 cut(s)	1035, 1425, 1510, 1615, 1721
FriOI	GRGCYC	5 cut(s)	81, 635, 708, 756, 1098
Fsp4HI	GCNGC	8 cut(s)	56, 59, 62, 114, 204, 991, 1004, 1237
FspBI	CTAG	4 cut(s)	1491, 1503, 1718, 1722
GlaI	GCGC	1 cut(s)	534
GluI	GCNGC	8 cut(s)	56, 59, 62, 114, 204, 991, 1004, 1237
GsaI	CCCAGC	1 cut(s)	55
GsuI	CTGGAG	2 cut(s)	1082, 1838
HaeII	RGCGCY	1 cut(s)	536
HaeIII	GGCC	4 cut(s)	5, 11, 116, 146
HapII	CCGG	1 cut(s)	1183
HgaI	GACGC	2 cut(s)	119, 471
HhaI	GCGC	1 cut(s)	535
Hin6I	GCGC	1 cut(s)	533
HinP1I	GCGC	1 cut(s)	533
HindIII	AAGCTT	1 cut(s)	504
HpaII	CCGG	1 cut(s)	1183
HphI	GGTGA	2 cut(s)	117, 809
Hpy166II	GTNNAC	7 cut(s)	738, 800, 1114, 1308, 1744, 1756, 1831
Hpy188III	TCNNGA	8 cut(s)	90, 749, 813, 863, 1010, 1099, 1325, 1562
Hpy8I	GTNNAC	7 cut(s)	738, 800, 1114, 1308, 1744, 1756, 1831
Hpy99I	CGWCG	1 cut(s)	113
HpyAV	CCTTC	5 cut(s)	397, 405, 813, 826, 1195
HpyCH4III	ACNGT	5 cut(s)	968, 1124, 1282, 1411, 1462
HpyCH4IV	ACGT	1 cut(s)	858
HpyF10VI	GCNNNNNNNGC	8 cut(s)	55, 61, 257, 422, 639, 751, 1718, 1822
HpyF3I	CTNAG	5 cut(s)	585, 643, 702, 934, 1536
HpySE526I	ACGT	1 cut(s)	858
HspAI	GCGC	1 cut(s)	533
Ksp22I	TGATCA	2 cut(s)	1495, 1659
Kzo9I	GATC	9 cut(s)	36, 157, 193, 429, 1152, 1223, 1495, 1659, 1793
LmnI	GCTCC	5 cut(s)	167, 638, 711, 1093, 1101
Lsp1109I	GCAGC	7 cut(s)	67, 70, 73, 190, 977, 1015, 1223
LweI	GCATC	4 cut(s)	838, 1057, 1532, 1936
MaeI	CTAG	4 cut(s)	1491, 1503, 1718, 1722
MaeII	ACGT	1 cut(s)	858
MaeIII	GTNAC	3 cut(s)	43, 397, 556
MalI	GATC	9 cut(s)	38, 159, 195, 431, 1154, 1225, 1497, 1661, 1795
MbiI	CCGCTC	1 cut(s)	130
MboI	GATC	9 cut(s)	36, 157, 193, 429, 1152, 1223, 1495, 1659, 1793
MfeI	CAATTG	2 cut(s)	277, 637
MflI	RGATCY	3 cut(s)	36, 429, 1793
MhlI	GDGCHC	6 cut(s)	81, 635, 708, 756, 1098, 1746
MlyI	GAGTC	3 cut(s)	98, 618, 896
MmeI	TCCRAC	3 cut(s)	132, 439, 1550
MroXI	GAANNNNTTC	2 cut(s)	473, 786
MseI	TTAA	4 cut(s)	648, 1056, 1839, 1935
MslI	CAYNNNNRTG	3 cut(s)	1737, 1739, 1890
MspA1I	CMGCKG	2 cut(s)	251, 990
MspI	CCGG	1 cut(s)	1183
MspR9I	CCNGG	4 cut(s)	290, 392, 1184, 1342
MunI	CAATTG	2 cut(s)	277, 637
Mva1269I	GAATGC	2 cut(s)	284, 1238
MvaI	CCWGG	3 cut(s)	290, 392, 1342
MvnI	CGCG	2 cut(s)	113, 1032
MwoI	GCNNNNNNNGC	8 cut(s)	55, 61, 257, 422, 639, 751, 1718, 1822
NciI	CCSGG	1 cut(s)	1184
NdeI	CATATG	1 cut(s)	315
NdeII	GATC	9 cut(s)	36, 157, 193, 429, 1152, 1223, 1495, 1659, 1793
NlaIV	GGNNCC	2 cut(s)	38, 550
NmeAIII	GCCGAG	2 cut(s)	122, 1846
NmuCI	GTSAC	3 cut(s)	43, 397, 556
NspI	RCATGY	3 cut(s)	405, 1882, 1895
PaeI	GCATGC	1 cut(s)	1882
PagI	TCATGA	1 cut(s)	1009
PcsI	WCGNNNNNNNCGW	1 cut(s)	896
PctI	GAATGC	2 cut(s)	284, 1238
PdmI	GAANNNNTTC	2 cut(s)	473, 786
PfoI	TCCNGGA	2 cut(s)	288, 390
PkrI	GCNGC	8 cut(s)	57, 60, 63, 115, 205, 992, 1005, 1238
PleI	GAGTC	3 cut(s)	98, 617, 895
PpsI	GAGTC	3 cut(s)	98, 617, 895
Psp124BI	GAGCTC	3 cut(s)	635, 708, 1098
Psp1406I	AACGTT	1 cut(s)	858
Psp6I	CCWGG	3 cut(s)	288, 390, 1340
PspFI	CCCAGC	1 cut(s)	51
PspGI	CCWGG	3 cut(s)	288, 390, 1340
PspN4I	GGNNCC	2 cut(s)	38, 550
PsuI	RGATCY	3 cut(s)	36, 429, 1793
PvuII	CAGCTG	2 cut(s)	251, 990
RsaI	GTAC	3 cut(s)	320, 473, 1113
RsaNI	GTAC	3 cut(s)	319, 472, 1112
RseI	CAYNNNNRTG	3 cut(s)	1737, 1739, 1890
SacI	GAGCTC	3 cut(s)	635, 708, 1098
SaqAI	TTAA	4 cut(s)	648, 1056, 1839, 1935
SatI	GCNGC	8 cut(s)	56, 59, 62, 114, 204, 991, 1004, 1237
Sau3AI	GATC	9 cut(s)	36, 157, 193, 429, 1152, 1223, 1495, 1659, 1793
ScaI	AGTACT	1 cut(s)	473
SchI	GAGTC	3 cut(s)	98, 618, 896
ScrFI	CCNGG	4 cut(s)	290, 392, 1184, 1342
SduI	GDGCHC	6 cut(s)	81, 635, 708, 756, 1098, 1746
SfaNI	GCATC	4 cut(s)	838, 1057, 1532, 1936
SfcI	CTRYAG	3 cut(s)	561, 1407, 1443
SmiMI	CAYNNNNRTG	3 cut(s)	1737, 1739, 1890
SmlI	CTYRAG	3 cut(s)	1382, 1633, 1871
SmoI	CTYRAG	3 cut(s)	1382, 1633, 1871
SphI	GCATGC	1 cut(s)	1882
SsiI	CCGC	4 cut(s)	15, 113, 128, 1030
SspMI	CTAG	4 cut(s)	1491, 1503, 1718, 1722
SstI	GAGCTC	3 cut(s)	635, 708, 1098
StyD4I	CCNGG	4 cut(s)	288, 390, 1182, 1340
StyI	CCWWGG	1 cut(s)	1311
TaaI	ACNGT	5 cut(s)	968, 1124, 1282, 1411, 1462
TaiI	ACGT	1 cut(s)	861
TaqI	TCGA	5 cut(s)	75, 267, 768, 1108, 1324
TatI	WGTACW	2 cut(s)	471, 1111
TauI	GCSGC	1 cut(s)	116
Tru1I	TTAA	4 cut(s)	648, 1056, 1839, 1935
Tru9I	TTAA	4 cut(s)	648, 1056, 1839, 1935
TscAI	CASTG	3 cut(s)	589, 682, 1783
TseFI	GTSAC	3 cut(s)	43, 397, 556
TseI	GCWGC	7 cut(s)	55, 58, 61, 203, 990, 1003, 1236
Tsp45I	GTSAC	3 cut(s)	43, 397, 556
TspRI	CASTG	3 cut(s)	589, 682, 1783
VneI	GTGCAC	1 cut(s)	1742
XapI	RAATTY	6 cut(s)	450, 687, 866, 1076, 1103, 1619
XceI	RCATGY	3 cut(s)	405, 1882, 1895
XcmI	CCANNNNNNNNNTGG	1 cut(s)	968
XmiI	GTMKAC	1 cut(s)	1307
XmnI	GAANNNNTTC	2 cut(s)	473, 786
XspI	CTAG	4 cut(s)	1491, 1503, 1718, 1722
ZrmI	AGTACT	1 cut(s)	473

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.