Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0001821

Physical Location & Seq

Genomic Coordinates Forward (+)

38442005 .. 38450668

Gene Structure 8664 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G017360.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1935 bp

ATGGCCGTGGCCTCCGCCTCCCCCGACAGGATCCCAGTCACGCCCCAGCAGCAGCAGCACCCCGTCATCGAGCCCTCGCCGTCCAGATTCTCCACCGACTCCGACGCCGCCTCGTCCTCACCGCTCGTCTCCTGCTCCGCCGACACACCTGATCGCACCGATCCTTCCTTTGCTTCTCCCAACACCGATCAGTCTGCTGCAAGATTGAAGAGTGAAGAGTATCGGCAGTTGTTTCGGCTTCCAGCTGAAGAAGCCCTCATCGAAGATTTCAATTGTGCATTCCAGGAGAATATACTTATTCAGGGTCATATGTACCTGTTTGTTCATTATATTTGCTTTTACTCAAATATATTTGGATATGAGACAAAGAAAATAATCCCATTTCAGGAAGTCACATGCGTAAAAAGGGCGAAGACAGCAGGGATCTTTCCTAATGCAATAGAAATTTTTGTTGGAGACAAGAAGTACTTCTTTGCGTCCTTTCTGTCCCGTGATGAAGCTTACAGAATCATAAATGATGGTTGGGCGCCATATGCTGATGGTGCCAAAGTGACTACAGAACAACAGGAATCAATCACTGAGACTAAAAACCAAGAGAATGGAGTCGTAATTGAAAAAGTGGAGAGCTCCAATTGCTTAGTTAATGAATTGGATTCTACTGAAAGGAACACTGATACTCAAATTTCAAAGGATTCTGAGCTCCCACCCAAAGTCGAAGACGATTCTGTGTTGACATCGCTTCCAGAGCCCAAAAGTGTTATCAAAGAGGATATAGAACCAGTTCTGAATGGTGAACCTTCATCTTCAAGAGATACCTTGATATGGAAGGAAGAAGATTCTGATGCCCCAAACGTTCCAGAATTTTATACAAAGGTTGCGGAGTCGCAGTTTCCGATAAAGGTTGAAGATTTCTTTAGTTTCTTTTACTCAGATGATGTGTTCATTGAATCATTCCATAACAGTTGTGGAGATAAAGAGTTCAGCTGCACTTCATGGCAGCCTCATGAGAAGTTTGGACATACCCGCGATGTTTCATTTCAGCATCCAATTAAAATCTACTTTGGTGCAAAATTTGGTAGCTGTAAGGAGCTCCAGAAATTTCGAGTACACAGAAACAGTCATTTAGTTATTGAGACATCACAAGAGATCAACGATGTGCCTTATGGAGATTATTTCCGGGTTGAGGGGCTTTGGAAGGTGGTGAGAGATACTGATGGATCAAAGGAATGCTGCAATTTGAAGATTTACTTGAATGTGGCATTTTCAAAAAGAACTGTTTGGAAAGGAAAGATAGTGCAGTCTACCTTGGAAGAATGTCGAGAGGTTTTTGCTACCTGGATAAACATGGCACATGAATTGTTGAAGACAAAGAACCTTGAGAAAGAAGCAGAGAGTATTCGCATGGTTAGCATGGTTCAGAAATGTGAAGTTCATCCTACAGAGGAAGCAGAGACGGTTCAGTCTTCTGAAAAGTTTTACGAGCCTAGTGATAGGATACAACAGATATCTGCATCCATAAACCCTAAGCACAAAGTTAGCAGTCTATTTCAAGAAAGTCCGAGTGATACTTACGCTCTTACCTCATGGTTGAGAGATTATATGATGAAATTTGGTTCATCCTTGAGGAATCAAAGCCATCTTCCATTGATCATAGTTATCATTGTTGCCGTGGTTTTCATAATGCAGTTGAGCATACTTGCACTACTAGCTAGACCCCAACACATCCATGTGCACTCTCCTGTGGACTATACAAGTGTCGTGGGCAGTGGTGTTGGTGGGAGATCTTCTGAAGTTATTACTTGGCTGGAGAAGCGAGTTCACAACCTTAAAGACGAGATGAACTTGGTTGAAGCTCGGCTTGAGAGCATGCGACATGAACATGCTCTCCTAAAAGCTCAACTTGAAGATTTCAAGCATCTTATTAAGCGTAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009719 GO:0009723 GO:0009725 GO:0009751 GO:0010033 GO:0010941 GO:0012505 GO:0014070 GO:0042221 GO:0042493 GO:0042742 GO:0043067 GO:0043069 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0060548 GO:0065007 GO:0098542 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF4782 GRAM

Protein Analysis

644

Amino Acids

73.4

Weight (kDa)

5.37

Isoelectric Point (pI)

57.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAM	PF02893	74 - 174	1.2e-24	GRAM domain
VASt	PF16016	292 - 437	2.4e-34	VAD1 Analog of StAR-related lipid transfer domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02120 AT1G02120 AT1G02120
fragaria_vesca	FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200 FvH4_7g10200
malus_domestica	MD02G1212800.v1.1 MD07G1109200.v1.1
prunus_persica	Prupe.2G131900_v2.0.a1 Prupe.2G131900_v2.0.a1 Prupe.2G131900_v2.0.a1
pyrus_communis	pycom02g17530 pycom07g09350
rosa_chinensis	RchiOBHm_Chr1g0347921
rosa_laevigata	RLG00000003066 RLG00000028703 RLG00000030623
rosa_multiflora	Rmu_co8098638.1_g000001 Rmu_ssc0000342.1_g000013 Rmu_ssc0000342.1_g000014 Rmu_ssc0000342.1_g000015
rosa_roxburghii	Rroxscaffold_4G00307370
rosa_rugosa	Rorug01G0190400
rosa_samantha	Rh1AG208900 Rh1BG173500 Rh1CG193100 Rh1DG203500 Rh2CG347700 Rh4AG404300 Rh4BG415400 Rh5AG377600
rosa_wichuraiana	Rw1G017360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1459
AccB1I	GGYRCC	2 cut(s)	526, 542
AccBSI	CCGCTC	1 cut(s)	124
AccI	GTMKAC	1 cut(s)	1301
AccII	CGCG	1 cut(s)	1026
AciI	CCGC	6 cut(s)	15, 108, 122, 138, 878, 1024
AclI	AACGTT	1 cut(s)	852
AclWI	GGATC	5 cut(s)	25, 38, 155, 431, 1225
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	6 cut(s)	444, 681, 860, 1070, 1097, 1607
AcuI	CTGAAG	2 cut(s)	267, 1809
AcyI	GRCGYC	2 cut(s)	105, 527
AfaI	GTAC	3 cut(s)	314, 467, 1107
AfiI	CCNNNNNNNGG	4 cut(s)	27, 385, 822, 1183
AjnI	CCWGG	2 cut(s)	282, 1334
AjuI	GAANNNNNNNTTGG	2 cut(s)	435, 467
AloI	GAACNNNNNNTCC	2 cut(s)	1869, 1901
Alw21I	GWGCWC	4 cut(s)	629, 702, 1092, 1734
Alw26I	GTCTC	6 cut(s)	133, 356, 450, 575, 1127, 1445
Alw44I	GTGCAC	1 cut(s)	1730
AlwI	GGATC	5 cut(s)	25, 38, 155, 431, 1225
AoxI	GGCC	2 cut(s)	3, 9
ApaLI	GTGCAC	1 cut(s)	1730
ApeKI	GCWGC	7 cut(s)	49, 52, 55, 197, 984, 997, 1230
ApoI	RAATTY	6 cut(s)	444, 681, 860, 1070, 1097, 1607
Asp700I	GAANNNNTTC	2 cut(s)	467, 780
AspLEI	GCGC	1 cut(s)	529
AsuC2I	CCSGG	1 cut(s)	1178
AsuHPI	GGTGA	3 cut(s)	111, 803, 1213
BaeGI	GKGCMC	1 cut(s)	1734
BamHI	GGATCC	1 cut(s)	30
BanI	GGYRCC	2 cut(s)	526, 542
BanII	GRGCYC	5 cut(s)	75, 629, 702, 750, 1092
BbsI	GAAGAC	4 cut(s)	419, 723, 1370, 1455
Bbv12I	GWGCWC	4 cut(s)	629, 702, 1092, 1734
BbvI	GCAGC	7 cut(s)	61, 64, 67, 184, 971, 1009, 1217
BccI	CCATC	4 cut(s)	512, 533, 1208, 1644
BceAI	ACGGC	2 cut(s)	64, 1652
BcgI	CGANNNNNNTGC	4 cut(s)	176, 210, 215, 249
BciT130I	CCWGG	2 cut(s)	284, 1336
BciVI	GTATCC	1 cut(s)	1488
BclI	TGATCA	1 cut(s)	1647
BcnI	CCSGG	1 cut(s)	1178
BcoDI	GTCTC	6 cut(s)	133, 356, 450, 575, 1127, 1445
BfaI	CTAG	3 cut(s)	1485, 1706, 1710
BfmI	CTRYAG	2 cut(s)	555, 1437
BfoI	RGCGCY	1 cut(s)	530
BfuI	GTATCC	1 cut(s)	1488
BglII	AGATCT	1 cut(s)	1781
BisI	GCNGC	8 cut(s)	50, 53, 56, 108, 198, 985, 998, 1231
BlsI	GCNGC	8 cut(s)	51, 54, 57, 109, 199, 986, 999, 1232
BmcAI	AGTACT	1 cut(s)	467
Bme1390I	CCNGG	3 cut(s)	284, 1178, 1336
BmiI	GGNNCC	3 cut(s)	32, 528, 544
BmrFI	CCNGG	3 cut(s)	284, 1178, 1336
BmrI	ACTGGG	1 cut(s)	29
BmsI	GCATC	4 cut(s)	832, 1051, 1520, 1924
BmuI	ACTGGG	1 cut(s)	29
BpiI	GAAGAC	4 cut(s)	419, 723, 1370, 1455
BpmI	CTGGAG	2 cut(s)	1076, 1826
Bpu10I	CCTNAGC	1 cut(s)	1524
BpuEI	CTTGAG	3 cut(s)	1397, 1642, 1880
BpuMI	CCSGG	1 cut(s)	1178
BsaHI	GRCGYC	2 cut(s)	105, 527
BsaJI	CCNNGG	3 cut(s)	6, 1305, 1668
BsaXI	ACNNNNNCTCC	4 cut(s)	872, 902, 1869, 1899
Bsc4I	CCNNNNNNNGG	4 cut(s)	27, 385, 822, 1183
Bse1I	ACTGG	2 cut(s)	35, 779
BseBI	CCWGG	2 cut(s)	284, 1336
BseDI	CCNNGG	3 cut(s)	6, 1305, 1668
BseGI	GGATG	5 cut(s)	1042, 1432, 1511, 1616, 1722
BseLI	CCNNNNNNNGG	4 cut(s)	27, 385, 822, 1183
BseMII	CTCAG	3 cut(s)	570, 687, 942
BseNI	ACTGG	2 cut(s)	35, 779
BseSI	GKGCMC	1 cut(s)	1734
BseXI	GCAGC	7 cut(s)	61, 64, 67, 184, 971, 1009, 1217
BseYI	CCCAGC	1 cut(s)	45
BsgI	GTGCAG	2 cut(s)	970, 1316
Bsh1236I	CGCG	1 cut(s)	1026
BshFI	GGCC	2 cut(s)	5, 11
BshNI	GGYRCC	2 cut(s)	526, 542
BsiHKAI	GWGCWC	4 cut(s)	629, 702, 1092, 1734
BsiSI	CCGG	1 cut(s)	1177
BslFI	GGGAC	1 cut(s)	472
BslI	CCNNNNNNNGG	4 cut(s)	27, 385, 822, 1183
BsmAI	GTCTC	6 cut(s)	133, 356, 450, 575, 1127, 1445
BsmBI	CGTCTC	2 cut(s)	133, 1445
BsmFI	GGGAC	1 cut(s)	472
BsmI	GAATGC	2 cut(s)	278, 1232
BsnI	GGCC	2 cut(s)	5, 11
Bsp1286I	GDGCHC	6 cut(s)	75, 629, 702, 750, 1092, 1734
Bsp143I	GATC	9 cut(s)	30, 151, 160, 187, 423, 1146, 1217, 1647, 1781
BspACI	CCGC	6 cut(s)	15, 108, 122, 138, 878, 1024
BspANI	GGCC	2 cut(s)	5, 11
BspCNI	CTCAG	3 cut(s)	571, 688, 941
BspFNI	CGCG	1 cut(s)	1026
BspHI	TCATGA	1 cut(s)	1003
BspLI	GGNNCC	3 cut(s)	32, 528, 544
BspPI	GGATC	5 cut(s)	25, 38, 155, 431, 1225
BspT107I	GGYRCC	2 cut(s)	526, 542
BsrBI	CCGCTC	1 cut(s)	124
BsrI	ACTGG	2 cut(s)	35, 779
BssECI	CCNNGG	3 cut(s)	6, 1305, 1668
BssMI	GATC	9 cut(s)	30, 151, 160, 187, 423, 1146, 1217, 1647, 1781
BssNI	GRCGYC	2 cut(s)	105, 527
BssT1I	CCWWGG	1 cut(s)	1305
Bst2UI	CCWGG	2 cut(s)	284, 1336
Bst4CI	ACNGT	4 cut(s)	962, 1118, 1276, 1456
Bst6I	CTCTTC	2 cut(s)	203, 210
BstACI	GRCGYC	2 cut(s)	105, 527
BstC8I	GCNNGC	1 cut(s)	1868
BstDEI	CTNAG	5 cut(s)	579, 637, 696, 928, 1524
BstDSI	CCRYGG	2 cut(s)	6, 1668
BstF5I	GGATG	5 cut(s)	1042, 1432, 1511, 1616, 1722
BstFNI	CGCG	1 cut(s)	1026
BstH2I	RGCGCY	1 cut(s)	530
BstHHI	GCGC	1 cut(s)	529
BstKTI	GATC	9 cut(s)	33, 154, 163, 190, 426, 1149, 1220, 1650, 1784
BstMAI	GTCTC	6 cut(s)	133, 356, 450, 575, 1127, 1445
BstMBI	GATC	9 cut(s)	30, 151, 160, 187, 423, 1146, 1217, 1647, 1781
BstNI	CCWGG	2 cut(s)	284, 1336
BstNSI	RCATGY	3 cut(s)	399, 1870, 1883
BstSCI	CCNGG	3 cut(s)	282, 1176, 1334
BstSFI	CTRYAG	2 cut(s)	555, 1437
BstSLI	GKGCMC	1 cut(s)	1734
BstUI	CGCG	1 cut(s)	1026
BstV1I	GCAGC	7 cut(s)	61, 64, 67, 184, 971, 1009, 1217
BstV2I	GAAGAC	4 cut(s)	419, 723, 1370, 1455
BstX2I	RGATCY	3 cut(s)	30, 423, 1781
BstXI	CCANNNNNNTGG	1 cut(s)	599
BstYI	RGATCY	3 cut(s)	30, 423, 1781
BsuI	GTATCC	1 cut(s)	1488
BsuRI	GGCC	2 cut(s)	5, 11
BtgI	CCRYGG	2 cut(s)	6, 1668
BtgZI	GCGATG	2 cut(s)	720, 1041
BtsCI	GGATG	5 cut(s)	1042, 1432, 1511, 1616, 1722
BtsI	GCAGTG	1 cut(s)	1771
BtsIMutI	CAGTG	3 cut(s)	576, 669, 1771
Cac8I	GCNNGC	1 cut(s)	1868
CciI	TCATGA	1 cut(s)	1003
CfoI	GCGC	1 cut(s)	529
CseI	GACGC	2 cut(s)	113, 465
Csp6I	GTAC	3 cut(s)	313, 466, 1106
CspCI	CAANNNNNGTGG	2 cut(s)	1740, 1775
CviQI	GTAC	3 cut(s)	313, 466, 1106
DdeI	CTNAG	5 cut(s)	579, 637, 696, 928, 1524
DinI	GGCGCC	1 cut(s)	528
DpnI	GATC	9 cut(s)	32, 153, 162, 189, 425, 1148, 1219, 1649, 1783
DpnII	GATC	9 cut(s)	30, 151, 160, 187, 423, 1146, 1217, 1647, 1781
DrdI	GACNNNNNNGTC	1 cut(s)	1459
DseDI	GACNNNNNNGTC	1 cut(s)	1459
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	2 cut(s)	203, 210
EarI	CTCTTC	2 cut(s)	203, 210
EciI	GGCGGA	2 cut(s)	4, 127
Ecl136II	GAGCTC	3 cut(s)	627, 700, 1090
Eco130I	CCWWGG	1 cut(s)	1305
Eco24I	GRGCYC	5 cut(s)	75, 629, 702, 750, 1092
Eco32I	GATATC	1 cut(s)	1506
Eco53kI	GAGCTC	3 cut(s)	627, 700, 1090
Eco57I	CTGAAG	2 cut(s)	267, 1809
EcoICRI	GAGCTC	3 cut(s)	627, 700, 1090
EcoRII	CCWGG	2 cut(s)	282, 1334
EcoRV	GATATC	1 cut(s)	1506
EcoT14I	CCWWGG	1 cut(s)	1305
EcoT38I	GRGCYC	5 cut(s)	75, 629, 702, 750, 1092
EgeI	GGCGCC	1 cut(s)	528
EheI	GGCGCC	1 cut(s)	528
ErhI	CCWWGG	1 cut(s)	1305
Esp3I	CGTCTC	2 cut(s)	133, 1445
FaqI	GGGAC	1 cut(s)	472
FauI	CCCGC	1 cut(s)	1031
FauNDI	CATATG	2 cut(s)	309, 532
FbaI	TGATCA	1 cut(s)	1647
FblI	GTMKAC	1 cut(s)	1301
Fnu4HI	GCNGC	8 cut(s)	50, 53, 56, 108, 198, 985, 998, 1231
FokI	GGATG	5 cut(s)	1029, 1419, 1498, 1603, 1709
FriOI	GRGCYC	5 cut(s)	75, 629, 702, 750, 1092
Fsp4HI	GCNGC	8 cut(s)	50, 53, 56, 108, 198, 985, 998, 1231
FspBI	CTAG	3 cut(s)	1485, 1706, 1710
GlaI	GCGC	1 cut(s)	528
GluI	GCNGC	8 cut(s)	50, 53, 56, 108, 198, 985, 998, 1231
GsaI	CCCAGC	1 cut(s)	49
GsuI	CTGGAG	2 cut(s)	1076, 1826
HaeII	RGCGCY	1 cut(s)	530
HaeIII	GGCC	2 cut(s)	5, 11
HapII	CCGG	1 cut(s)	1177
HgaI	GACGC	2 cut(s)	113, 465
HhaI	GCGC	1 cut(s)	529
Hin1I	GRCGYC	2 cut(s)	105, 527
Hin6I	GCGC	1 cut(s)	527
HinP1I	GCGC	1 cut(s)	527
HincII	GTYRAC	1 cut(s)	732
HindII	GTYRAC	1 cut(s)	732
HindIII	AAGCTT	1 cut(s)	498
HpaII	CCGG	1 cut(s)	1177
HphI	GGTGA	3 cut(s)	111, 803, 1213
Hpy166II	GTNNAC	7 cut(s)	732, 794, 1108, 1302, 1732, 1744, 1819
Hpy188III	TCNNGA	9 cut(s)	84, 386, 743, 807, 857, 1004, 1093, 1319, 1550
Hpy8I	GTNNAC	7 cut(s)	732, 794, 1108, 1302, 1732, 1744, 1819
Hpy99I	CGWCG	1 cut(s)	107
HpyAV	CCTTC	4 cut(s)	174, 807, 820, 1189
HpyCH4III	ACNGT	4 cut(s)	962, 1118, 1276, 1456
HpyCH4IV	ACGT	1 cut(s)	852
HpyF3I	CTNAG	5 cut(s)	579, 637, 696, 928, 1524
HpySE526I	ACGT	1 cut(s)	852
Hsp92I	GRCGYC	2 cut(s)	105, 527
HspAI	GCGC	1 cut(s)	527
KasI	GGCGCC	1 cut(s)	526
Ksp22I	TGATCA	1 cut(s)	1647
Kzo9I	GATC	9 cut(s)	30, 151, 160, 187, 423, 1146, 1217, 1647, 1781
LmnI	GCTCC	5 cut(s)	140, 632, 705, 1087, 1095
Lsp1109I	GCAGC	7 cut(s)	61, 64, 67, 184, 971, 1009, 1217
LweI	GCATC	4 cut(s)	832, 1051, 1520, 1924
MaeI	CTAG	3 cut(s)	1485, 1706, 1710
MaeII	ACGT	1 cut(s)	852
MaeIII	GTNAC	3 cut(s)	37, 391, 550
MalI	GATC	9 cut(s)	32, 153, 162, 189, 425, 1148, 1219, 1649, 1783
MbiI	CCGCTC	1 cut(s)	124
MboI	GATC	9 cut(s)	30, 151, 160, 187, 423, 1146, 1217, 1647, 1781
MfeI	CAATTG	2 cut(s)	271, 631
MflI	RGATCY	3 cut(s)	30, 423, 1781
MhlI	GDGCHC	6 cut(s)	75, 629, 702, 750, 1092, 1734
Mly113I	GGCGCC	1 cut(s)	527
MlyI	GAGTC	3 cut(s)	92, 612, 890
MmeI	TCCRAC	2 cut(s)	126, 433
MroXI	GAANNNNTTC	2 cut(s)	467, 780
MseI	TTAA	4 cut(s)	642, 1050, 1827, 1923
MslI	CAYNNNNRTG	3 cut(s)	1725, 1727, 1878
MspA1I	CMGCKG	2 cut(s)	245, 984
MspI	CCGG	1 cut(s)	1177
MspR9I	CCNGG	3 cut(s)	284, 1178, 1336
MunI	CAATTG	2 cut(s)	271, 631
Mva1269I	GAATGC	2 cut(s)	278, 1232
MvaI	CCWGG	2 cut(s)	284, 1336
MvnI	CGCG	1 cut(s)	1026
NarI	GGCGCC	1 cut(s)	527
NciI	CCSGG	1 cut(s)	1178
NdeI	CATATG	2 cut(s)	309, 532
NdeII	GATC	9 cut(s)	30, 151, 160, 187, 423, 1146, 1217, 1647, 1781
NlaIV	GGNNCC	3 cut(s)	32, 528, 544
NmeAIII	GCCGAG	1 cut(s)	1834
NmuCI	GTSAC	3 cut(s)	37, 391, 550
NspI	RCATGY	3 cut(s)	399, 1870, 1883
PaeI	GCATGC	1 cut(s)	1870
PagI	TCATGA	1 cut(s)	1003
PcsI	WCGNNNNNNNCGW	1 cut(s)	890
PctI	GAATGC	2 cut(s)	278, 1232
PdmI	GAANNNNTTC	2 cut(s)	467, 780
PfeI	GAWTC	9 cut(s)	87, 507, 569, 653, 692, 722, 836, 947, 1627
PfoI	TCCNGGA	1 cut(s)	282
PkrI	GCNGC	8 cut(s)	51, 54, 57, 109, 199, 986, 999, 1232
PleI	GAGTC	3 cut(s)	92, 611, 889
PluTI	GGCGCC	1 cut(s)	530
PpsI	GAGTC	3 cut(s)	92, 611, 889
Psp124BI	GAGCTC	3 cut(s)	629, 702, 1092
Psp1406I	AACGTT	1 cut(s)	852
Psp6I	CCWGG	2 cut(s)	282, 1334
PspFI	CCCAGC	1 cut(s)	45
PspGI	CCWGG	2 cut(s)	282, 1334
PspN4I	GGNNCC	3 cut(s)	32, 528, 544
PsuI	RGATCY	3 cut(s)	30, 423, 1781
PvuII	CAGCTG	2 cut(s)	245, 984
RsaI	GTAC	3 cut(s)	314, 467, 1107
RsaNI	GTAC	3 cut(s)	313, 466, 1106
RseI	CAYNNNNRTG	3 cut(s)	1725, 1727, 1878
SacI	GAGCTC	3 cut(s)	629, 702, 1092
SaqAI	TTAA	4 cut(s)	642, 1050, 1827, 1923
SatI	GCNGC	8 cut(s)	50, 53, 56, 108, 198, 985, 998, 1231
Sau3AI	GATC	9 cut(s)	30, 151, 160, 187, 423, 1146, 1217, 1647, 1781
ScaI	AGTACT	1 cut(s)	467
SchI	GAGTC	3 cut(s)	92, 612, 890
ScrFI	CCNGG	3 cut(s)	284, 1178, 1336
SduI	GDGCHC	6 cut(s)	75, 629, 702, 750, 1092, 1734
SfaNI	GCATC	4 cut(s)	832, 1051, 1520, 1924
SfcI	CTRYAG	2 cut(s)	555, 1437
SfoI	GGCGCC	1 cut(s)	528
SmiMI	CAYNNNNRTG	3 cut(s)	1725, 1727, 1878
SmlI	CTYRAG	3 cut(s)	1376, 1621, 1859
SmoI	CTYRAG	3 cut(s)	1376, 1621, 1859
SphI	GCATGC	1 cut(s)	1870
SsiI	CCGC	6 cut(s)	15, 108, 122, 138, 878, 1024
SspDI	GGCGCC	1 cut(s)	526
SspMI	CTAG	3 cut(s)	1485, 1706, 1710
SstI	GAGCTC	3 cut(s)	629, 702, 1092
StyD4I	CCNGG	3 cut(s)	282, 1176, 1334
StyI	CCWWGG	1 cut(s)	1305
TaaI	ACNGT	4 cut(s)	962, 1118, 1276, 1456
TaiI	ACGT	1 cut(s)	855
TaqI	TCGA	5 cut(s)	69, 261, 714, 1102, 1318
TatI	WGTACW	2 cut(s)	465, 1105
TauI	GCSGC	1 cut(s)	110
TfiI	GAWTC	9 cut(s)	87, 507, 569, 653, 692, 722, 836, 947, 1627
Tru1I	TTAA	4 cut(s)	642, 1050, 1827, 1923
Tru9I	TTAA	4 cut(s)	642, 1050, 1827, 1923
TscAI	CASTG	3 cut(s)	583, 676, 1771
TseFI	GTSAC	3 cut(s)	37, 391, 550
TseI	GCWGC	7 cut(s)	49, 52, 55, 197, 984, 997, 1230
Tsp45I	GTSAC	3 cut(s)	37, 391, 550
TspRI	CASTG	3 cut(s)	583, 676, 1771
VneI	GTGCAC	1 cut(s)	1730
XapI	RAATTY	6 cut(s)	444, 681, 860, 1070, 1097, 1607
XceI	RCATGY	3 cut(s)	399, 1870, 1883
XcmI	CCANNNNNNNNNTGG	1 cut(s)	962
XmiI	GTMKAC	1 cut(s)	1301
XmnI	GAANNNNTTC	2 cut(s)	467, 780
XspI	CTAG	3 cut(s)	1485, 1706, 1710
ZrmI	AGTACT	1 cut(s)	467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.