MD03G1017300.v1.1

Receptor-like protein 2

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Reverse (-)
1356642 .. 1358834
2193 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1017300.v1.1.491

Sequence Viewer

Length: 2193 bp
ATGCCGGAACCTAGTCATATAATGCCTTGTGAAGTCCTCTTCCTGTTTTTTGTGTTCTCTGCTTTCATTTCTACAAACCATGCTTGCAACAAGGCAGATCACAACTCTCTTTTGTCATCTTTCAATATGTCTTCTCGTTTAAATTGGTCTTCCAGTGATTGTTGTCGCTGGGAAGGCATCGCCTGTGATGCCAATGGTAGGGTAACACATGTTTTGTTGCCCTCTAAACAGCTCCAAGGAGGCGTTTCTTGCTCTCTTGGAAACCTCACACATCTTTCGCACCTCAATCTCTCCCACAACCTGCTTTCCGGTCCTCTTGATGTTGGACTACTGTTGTCCTTGAGTCGCGTCGAAATCCTTGATTTGAGCTATAACCTTCTCTCCGGAGAAGTACCATTGTTTCTATCATCTAGTTACATTCAAATAGTGGATTTGTCGAACAATCAATTCAATGGAACAATTCCATCTTCATTCCTCCAGCATGCCTGGAGTTTGAGCAGCTTGAATGTCAGTAAAAATCATTTTACTGGCAAATTACCTTCCTCCATTTGTCTTCGTTCCTCTTCGGTCAGAGTCTTGGATTTCTCCCACAACGATTTCAATGGCTCAATTCCTCTCGGACTAGGAAACTGTTTGAAATTGGAAATCTTTCGCGCGGGCTTTAATACTCTTTCTGGGACTCTTCCTAGTGATCTCTTCAAAGCTCAAGCGCTTCACGAAATTTCGTTACCTTCCAATCAGCTTTTCGGTCACATTAGTAACAACGTTGTCAATCTCACAAGCCTCACAATCCTAGAGATTTACTTTAATCATTTGAGTGGTGCACTTCCTCTCCATATCGGGAAGCTCTCCAAATTAAAACTCATGCTCCTTCAATTCAACAATCTTGAAGGCCCTCTGCCCCCATCTTTGATGAATTGCACAAACCTTATCGAACTCAATCTTGAATCCAACCATTTAGATGGAAATATCTCGGAGCTAGATTTTTCAAAACTCAATCAACTTATCAAGCTTAATCTTGGGAGCAATTACTTCTCCGGTGTCATGCCAAAAAGCCTTTACTCATGCAAGTTTCTGAAAGCAGTTCGCCTGAGCGGTAATTATCTAGAGGGACAAATACAACCCGAGATTGTTTCATTGAAATACCTATCCTTCCTCGCACTTGGTAGCAACAGACTTACCAATGTCACTGGCGCTCTGCATATATTGATGCGTTTCGAAAGTCTCAGGGTGGTCTTGCTTCCAAATAATTTTATAGGTGAAGAACTGCCGGATGGTGATGCTATGATTGGTTCTGGGTTTCAAAATCTCCGCCTTTTTGGCTTATCGGATTGCCAACTTAAAGGTCATATTCCGGTGTGGATGTCAAAGCTCAAGAAACTCGAAGCCCTTGATTTGTCTTCCAACAGACTCACAGGCTCAATACCTCATTGGTTGGGAAGTCTTCCCAGTCTTTTCTTCATAAGCTTGAACAACAACTCTCTTTCGGGGGGACTTCCAAATGAGCTTTTCTCACTACAAGCTCTTGTATCCGAGAAGCCTGCCTCTCAAAGAGATAGTGGTGATGTCGAGCTACCTATCAACACGCAGCGAACAAATGCATCTGTCACAGCTCTGCAGTACAACTATGTGTCCAACTTGCCGCGAGCAATTTACATCCGGAATAACAGTCTAAGTGGCAATATTCCCGTTGAGATAGGCCAGTTGCAAAACCTTCACGAGCTGGATCTCAGCGTCAACAACATCGTTGGCAGCATTCCGGACCAGGTATCTAACCTCACAAACTTGGAGAGATTAGACCTCTCAAGAAACCATCTGTCGGGCGGAATCCCAGCTTCACTATCAAATCTTCATTTCTTGGCTTCACTTAGTGTTGCATACAATAACCTCCAAGGACAAGTACCGTTAGGCACTCAGATCCAAGGCTTCGATGCCACTGCCTTTGAGGGCAACCCAGGACTTTGCGGTTCCCCGCTTCCAAACAAATGCCAGCAGAACACAAGTGATAATGCAACTAAGAACATGGAAGATGTGCATGGCAATGGGAATGAAATTCCATGGTTTTATATTTCAGTGGCTCTTGGTTTCATTGTAGGATTTTGGGGAGTTTGTGGCTCTTTAGCTTTGATCACGTCATGGCGATATGCGTATTTCCAGTTCCTCTCTGATGTTAAAGATCGCTTCATATGTTGA

Protein Analysis

731

Amino Acids

79.96

Weight (kDa)

6.26

Isoelectric Point (pI)

37.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 436 - 495 1.9e-08 Leucine rich repeat
LRR_14 PF23598 542 - 626 1.8e-07 Leucine-rich repeat region
LRR_8 PF13855 571 - 630 1.6e-06 Leucine rich repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000019)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17240 AT1G17240
fragaria_vesca FvH4_3g20130 FvH4_3g38570 FvH4_3g39440 FvH4_3g39490 FvH4_3g44120 FvH4_3g44870 FvH4_3g44871 FvH4_3g44872 FvH4_3g44880 FvH4_3g44920 FvH4_3g44930 FvH4_3g44961 FvH4_3g45010 FvH4_3g45260 FvH4_3g45620 FvH4_4g36600 FvH4_5g12510 FvH4_7g14120
malus_domestica MD00G1077300.v1.1 MD00G1077400.v1.1 MD00G1077600.v1.1 MD00G1077700.v1.1 MD00G1077800.v1.1 MD00G1082100.v1.1 MD00G1082200.v1.1 MD00G1082300.v1.1 MD00G1082400.v1.1 MD00G1082500.v1.1 MD00G1082600.v1.1 MD00G1082900.v1.1 MD01G1061700.v1.1 MD03G1017100.v1.1 MD03G1017300.v1.1 MD03G1017400.v1.1 MD03G1017700.v1.1 MD03G1017800.v1.1 MD03G1018000.v1.1 MD03G1018100.v1.1 MD03G1018300.v1.1 MD03G1019300.v1.1 MD03G1022100.v1.1 MD03G1178700.v1.1 MD03G1192900.v1.1 MD03G1224400.v1.1 MD03G1227100.v1.1 MD03G1240600.v1.1 MD03G1243900.v1.1 MD03G1244000.v1.1 MD03G1244200.v1.1 MD04G1167200.v1.1 MD05G1078800.v1.1 MD05G1342800.v1.1 MD06G1055100.v1.1 MD09G1166800.v1.1 MD10G1316900.v1.1 MD10G1317500.v1.1 MD11G1017800.v1.1 MD11G1018100.v1.1 MD11G1018300.v1.1 MD11G1018400.v1.1 MD11G1018500.v1.1 MD11G1018800.v1.1 MD11G1018900.v1.1 MD11G1019000.v1.1 MD11G1019200.v1.1 MD11G1248200.v1.1 MD11G1248600.v1.1 MD11G1248700.v1.1 MD11G1249200.v1.1 MD11G1249300.v1.1 MD11G1249400.v1.1 MD13G1259100.v1.1 MD15G1321500.v1.1
prunus_persica Prupe.2G076700_v2.0.a1 Prupe.2G098300_v2.0.a1 Prupe.2G098400_v2.0.a1 Prupe.2G098500_v2.0.a1 Prupe.2G104600_v2.0.a1 Prupe.4G161800_v2.0.a1 Prupe.4G162000_v2.0.a1 Prupe.4G162500_v2.0.a1 Prupe.4G162600_v2.0.a1 Prupe.4G162700_v2.0.a1 Prupe.4G162800_v2.0.a1 Prupe.4G162900_v2.0.a1 Prupe.4G163000_v2.0.a1 Prupe.4G163100_v2.0.a1 Prupe.4G163200_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163400_v2.0.a1 Prupe.4G163500_v2.0.a1 Prupe.4G163700_v2.0.a1 Prupe.4G163800_v2.0.a1 Prupe.4G168500_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G168700_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169200_v2.0.a1 Prupe.4G169300_v2.0.a1 Prupe.4G169500_v2.0.a1 Prupe.4G169600_v2.0.a1 Prupe.4G169700_v2.0.a1 Prupe.4G169800_v2.0.a1 Prupe.4G169900_v2.0.a1 Prupe.4G246600_v2.0.a1 Prupe.4G247100_v2.0.a1 Prupe.4G278900_v2.0.a1 Prupe.6G009600_v2.0.a1 Prupe.6G009700_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015500_v2.0.a1 Prupe.6G015600_v2.0.a1 Prupe.6G116800_v2.0.a1 Prupe.7G032800_v2.0.a1 Prupe.8G027500_v2.0.a1 Prupe.I002800_v2.0.a1 Prupe.I002900_v2.0.a1
pyrus_communis pycom03g01480 pycom03g01490 pycom03g01540 pycom03g01550 pycom03g01570 pycom03g01580 pycom03g01590 pycom03g01600 pycom03g14520 pycom03g17280 pycom03g17600 pycom03g18580 pycom03g18600 pycom03g18630 pycom03g18660 pycom03g18680 pycom03g18710 pycom03g19150 pycom03g19220 pycom03g19270 pycom03g19280 pycom03g19290 pycom10g26890 pycom11g01260 pycom11g01340 pycom11g01360 pycom11g01380 pycom11g01390 pycom11g01400 pycom11g10130 pycom11g21430 pycom11g22050 pycom11g22060 pycom11g22070 pycom13g28870 pycom17g14930
rosa_chinensis RchiOBHm_Chr1g0319001 RchiOBHm_Chr1g0324181 RchiOBHm_Chr1g0324191 RchiOBHm_Chr1g0324201 RchiOBHm_Chr1g0325621 RchiOBHm_Chr1g0325631 RchiOBHm_Chr1g0337581 RchiOBHm_Chr1g0356371 RchiOBHm_Chr3g0460481 RchiOBHm_Chr3g0460851 RchiOBHm_Chr4g0390631 RchiOBHm_Chr4g0401291 RchiOBHm_Chr4g0401451 RchiOBHm_Chr4g0401571 RchiOBHm_Chr4g0401581 RchiOBHm_Chr5g0048661 RchiOBHm_Chr5g0058421 RchiOBHm_Chr5g0061041 RchiOBHm_Chr5g0070961 RchiOBHm_Chr5g0070971 RchiOBHm_Chr5g0070981 RchiOBHm_Chr5g0071011 RchiOBHm_Chr5g0071031 RchiOBHm_Chr5g0071041 RchiOBHm_Chr5g0071071 RchiOBHm_Chr5g0071241 RchiOBHm_Chr5g0073001 RchiOBHm_Chr5g0080401 RchiOBHm_Chr5g0080411 RchiOBHm_Chr5g0080431 RchiOBHm_Chr5g0081581 RchiOBHm_Chr5g0081611 RchiOBHm_Chr5g0081621 RchiOBHm_Chr5g0081631 RchiOBHm_Chr5g0081651 RchiOBHm_Chr5g0081681 RchiOBHm_Chr5g0081691 RchiOBHm_Chr5g0081701 RchiOBHm_Chr5g0081711 RchiOBHm_Chr5g0081721 RchiOBHm_Chr5g0081771 RchiOBHm_Chr5g0081811 RchiOBHm_Chr5g0081871 RchiOBHm_Chr5g0081881 RchiOBHm_Chr5g0081891 RchiOBHm_Chr5g0081941 RchiOBHm_Chr5g0081991 RchiOBHm_Chr5g0082011 RchiOBHm_Chr5g0082041 RchiOBHm_Chr5g0082061 RchiOBHm_Chr5g0082071 RchiOBHm_Chr5g0082091 RchiOBHm_Chr5g0082101 RchiOBHm_Chr5g0082111 RchiOBHm_Chr5g0082121 RchiOBHm_Chr5g0082131 RchiOBHm_Chr5g0082151 RchiOBHm_Chr5g0082161 RchiOBHm_Chr5g0082181 RchiOBHm_Chr5g0082191 RchiOBHm_Chr5g0082221 RchiOBHm_Chr5g0082241 RchiOBHm_Chr5g0082281 RchiOBHm_Chr5g0082311 RchiOBHm_Chr5g0082341 RchiOBHm_Chr5g0082351 RchiOBHm_Chr5g0082361 RchiOBHm_Chr5g0082381 RchiOBHm_Chr5g0082401 RchiOBHm_Chr5g0082481 RchiOBHm_Chr5g0082491 RchiOBHm_Chr5g0082511 RchiOBHm_Chr5g0082541 RchiOBHm_Chr5g0082571 RchiOBHm_Chr5g0082581 RchiOBHm_Chr5g0082631 RchiOBHm_Chr5g0082641 RchiOBHm_Chr5g0082681 RchiOBHm_Chr5g0082691 RchiOBHm_Chr5g0082711 RchiOBHm_Chr5g0082721 RchiOBHm_Chr5g0082741 RchiOBHm_Chr5g0082761 RchiOBHm_Chr5g0082771 RchiOBHm_Chr5g0082791 RchiOBHm_Chr5g0082911 RchiOBHm_Chr5g0083581 RchiOBHm_Chr5g0083791 RchiOBHm_Chr5g0083801 RchiOBHm_Chr6g0254081 RchiOBHm_Chr6g0254101 RchiOBHm_Chr6g0254111 RchiOBHm_Chr6g0264911 RchiOBHm_Chr6g0264921 RchiOBHm_Chr6g0288561 RchiOBHm_Chr6g0288571 RchiOBHm_Chr6g0288581 RchiOBHm_Chr7g0213611 RchiOBHm_Chr7g0219981
rosa_laevigata RLG00000009153 RLG00000012388 RLG00000014228 RLG00000014943 RLG00000022645 RLG00000022650 RLG00000022651 RLG00000022652 RLG00000029218 RLG00000030214 RLG00000030509 RLG00000034547 RLG00000035219 RLG00000035220 RLG00000035423 RLG00000036175 RLG00000036178 RLG00000036179 RLG00000036180 RLG00000036181 RLG00000036185 RLG00000036188 RLG00000036194 RLG00000036852 RLG00000036854 RLG00000036855 RLG00000036856 RLG00000036931 RLG00000036950 RLG00000036954 RLG00000036955 RLG00000036956 RLG00000036958 RLG00000036959 RLG00000036960 RLG00000036961 RLG00000036963 RLG00000036965 RLG00000036966 RLG00000036967 RLG00000036968 RLG00000036970 RLG00000036973 RLG00000036975 RLG00000036976 RLG00000036977 RLG00000036980 RLG00000036981 RLG00000036982 RLG00000036985 RLG00000036987 RLG00000036988 RLG00000036998 RLG00000037052
rosa_multiflora Rmu_co8036076.1_g000001 Rmu_co8177402.1_g000001 Rmu_co8334763.1_g000001 Rmu_co8349127.1_g000001 Rmu_sc0000045.1_g000017 Rmu_sc0000070.1_g000053 Rmu_sc0000303.1_g000007 Rmu_sc0000303.1_g000010 Rmu_sc0000303.1_g000012 Rmu_sc0000303.1_g000013 Rmu_sc0000303.1_g000014 Rmu_sc0000303.1_g000018 Rmu_sc0000303.1_g000019 Rmu_sc0000303.1_g000022 Rmu_sc0000303.1_g000042 Rmu_sc0000303.1_g000056 Rmu_sc0000546.1_g000056 Rmu_sc0000640.1_g000002 Rmu_sc0000826.1_g000001 Rmu_sc0001112.1_g000002 Rmu_sc0001141.1_g000033 Rmu_sc0001215.1_g000009 Rmu_sc0001287.1_g000034 Rmu_sc0001381.1_g000021 Rmu_sc0001381.1_g000024 Rmu_sc0001524.1_g000031 Rmu_sc0001687.1_g000001 Rmu_sc0001687.1_g000006 Rmu_sc0001687.1_g000011 Rmu_sc0001687.1_g000014 Rmu_sc0001687.1_g000023 Rmu_sc0001687.1_g000024 Rmu_sc0001687.1_g000027 Rmu_sc0001687.1_g000031 Rmu_sc0001687.1_g000035 Rmu_sc0001716.1_g000031 Rmu_sc0001716.1_g000032 Rmu_sc0001850.1_g000014 Rmu_sc0002058.1_g000014 Rmu_sc0002176.1_g000003 Rmu_sc0002176.1_g000013 Rmu_sc0002176.1_g000028 Rmu_sc0002245.1_g000028 Rmu_sc0002245.1_g000035 Rmu_sc0002706.1_g000008 Rmu_sc0002706.1_g000012 Rmu_sc0002706.1_g000026 Rmu_sc0002723.1_g000004 Rmu_sc0002723.1_g000040 Rmu_sc0002723.1_g000042 Rmu_sc0002723.1_g000044 Rmu_sc0002723.1_g000049 Rmu_sc0002934.1_g000045 Rmu_sc0003503.1_g000004 Rmu_sc0003602.1_g000007 Rmu_sc0003602.1_g000008 Rmu_sc0003638.1_g000001 Rmu_sc0004955.1_g000002 Rmu_sc0006067.1_g000014 Rmu_sc0006203.1_g000013 Rmu_sc0006792.1_g000003 Rmu_sc0006792.1_g000006 Rmu_sc0006792.1_g000016 Rmu_sc0006803.1_g000024 Rmu_sc0006803.1_g000031 Rmu_sc0006803.1_g000032 Rmu_sc0006928.1_g000008 Rmu_sc0006928.1_g000013 Rmu_sc0006928.1_g000015 Rmu_sc0006948.1_g000001 Rmu_sc0006948.1_g000002 Rmu_sc0006948.1_g000008 Rmu_sc0006948.1_g000017 Rmu_sc0006948.1_g000018 Rmu_sc0007172.1_g000009 Rmu_sc0007734.1_g000005 Rmu_sc0008938.1_g000006 Rmu_sc0008955.1_g000010 Rmu_sc0009339.1_g000008 Rmu_sc0009339.1_g000013 Rmu_sc0011683.1_g000001 Rmu_sc0011830.1_g000004 Rmu_sc0012061.1_g000002 Rmu_sc0012399.1_g000003 Rmu_sc0017691.1_g000004 Rmu_sc0017709.1_g000011 Rmu_sc0022834.1_g000001 Rmu_sc0028642.1_g000001 Rmu_sc0030324.1_g000001 Rmu_sc0031888.1_g000001 Rmu_ssc0000167.1_g000026
rosa_roxburghii Rroxscaffold_160G00433710 Rroxscaffold_1G00000790 Rroxscaffold_1G00001660 Rroxscaffold_1G00001670 Rroxscaffold_1G00001710 Rroxscaffold_1G00001750 Rroxscaffold_1G00001800 Rroxscaffold_1G00001840 Rroxscaffold_1G00001940 Rroxscaffold_1G00001970 Rroxscaffold_1G00002960 Rroxscaffold_1G00002990 Rroxscaffold_1G00003000 Rroxscaffold_1G00008220 Rroxscaffold_1G00009900 Rroxscaffold_1G00010000 Rroxscaffold_1G00010050 Rroxscaffold_1G00010070 Rroxscaffold_1G00010120 Rroxscaffold_1G00010160 Rroxscaffold_1G00010180 Rroxscaffold_1G00010190 Rroxscaffold_1G00010200 Rroxscaffold_1G00022130 Rroxscaffold_3G00240580 Rroxscaffold_3G00240670 Rroxscaffold_3G00240680 Rroxscaffold_3G00240690 Rroxscaffold_3G00240710 Rroxscaffold_4G00299620 Rroxscaffold_4G00313390 Rroxscaffold_4G00314060 Rroxscaffold_4G00325770 Rroxscaffold_4G00328690 Rroxscaffold_5G00346120 Rroxscaffold_5G00386550 Rroxscaffold_7G00179980 Rroxscaffold_7G00211210 Rroxscaffold_7G00211250
rosa_rugosa Rorug01G0043700 Rorug01G0136600.1 Rorug03G0305600.1 Rorug04G0029400 Rorug05G0314200 Rorug05G0336300 Rorug05G0382200 Rorug05G0408800 Rorug05G0409000 Rorug05G0409100 Rorug05G0409200 Rorug05G0410100 Rorug05G0410300 Rorug05G0410800 Rorug05G0468400 Rorug05G0468700 Rorug05G0468800 Rorug05G0468800 Rorug05G0468900 Rorug05G0477400 Rorug05G0477500 Rorug05G0477600 Rorug05G0477600 Rorug05G0477900 Rorug05G0478200 Rorug05G0478300 Rorug05G0478400 Rorug05G0478500 Rorug05G0478800 Rorug05G0478900 Rorug05G0479000 Rorug05G0479200 Rorug05G0479400 Rorug05G0479500 Rorug05G0479600 Rorug05G0486100 Rorug05G0546500 Rorug05G0549100 Rorug05G0549500 Rorug06G0197200 Rorug06G0197300 Rorug07G0298200
rosa_samantha Rh4AG430100 Rh4BG442900 Rh4CG460200 Rh5BG554400 Rh5BG554900
rosa_wichuraiana Rw0G007970 Rw0G010400 Rw0G019530 Rw0G022960 Rw0G023240 Rw1G002960 Rw1G012810 Rw4G008700 Rw5G015400 Rw5G029320 Rw5G030000 Rw5G030230 Rw5G043260 Rw5G043270 Rw5G043300 Rw5G043390 Rw5G049210 Rw5G049350 Rw5G049360 Rw5G049370 Rw5G049390 Rw5G049410 Rw5G049430 Rw5G049450 Rw5G049460 Rw5G049470 Rw5G049490 Rw5G049600 Rw5G050560 Rw6G001400 Rw6G005800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 309
AccBSI CCGCTC 1 cut(s) 1095
AccII CGCG 4 cut(s) 348, 654, 656, 1645
AccIII TCCGGA 3 cut(s) 383, 1659, 1759
AciI CCGC 7 cut(s) 656, 1095, 1312, 1643, 1824, 1965, 1973
AclI AACGTT 1 cut(s) 765
AclWI GGATC 2 cut(s) 1734, 1912
AcsI RAATTY 2 cut(s) 720, 2052
AdeI CACNNNGTG 1 cut(s) 1871
AfaI GTAC 3 cut(s) 393, 1622, 1902
AfeI AGCGCT 1 cut(s) 711
AfiI CCNNNNNNNGG 2 cut(s) 198, 1819
AflIII ACRYGT 1 cut(s) 208
AjiI CACGTC 1 cut(s) 2133
AjnI CCWGG 3 cut(s) 485, 1764, 1954
AjuI GAANNNNNNNTTGG 2 cut(s) 728, 760
Alw21I GWGCWC 1 cut(s) 826
Alw26I GTCTC 1 cut(s) 1229
Alw44I GTGCAC 1 cut(s) 822
AlwI GGATC 2 cut(s) 1734, 1912
Ama87I CYCGRG 1 cut(s) 1124
Aor13HI TCCGGA 3 cut(s) 383, 1659, 1759
Aor51HI AGCGCT 1 cut(s) 711
AoxI GGCC 2 cut(s) 892, 1699
ApaLI GTGCAC 1 cut(s) 822
ApeKI GCWGC 3 cut(s) 498, 1588, 1752
ApoI RAATTY 2 cut(s) 720, 2052
Asp700I GAANNNNTTC 1 cut(s) 648
AspLEI GCGC 3 cut(s) 656, 712, 1196
AspS9I GGNCC 3 cut(s) 311, 893, 1762
AsuHPI GGTGA 3 cut(s) 1271, 1289, 1574
AsuII TTCGAA 1 cut(s) 1218
AvaI CYCGRG 1 cut(s) 1124
AvaII GGWCC 2 cut(s) 311, 1762
BaeGI GKGCMC 1 cut(s) 826
BauI CACGAG 1 cut(s) 1718
BbsI GAAGAC 5 cut(s) 123, 141, 545, 1392, 1436
Bbv12I GWGCWC 1 cut(s) 826
BbvI GCAGC 3 cut(s) 510, 1600, 1764
BccI CCATC 5 cut(s) 472, 913, 956, 1268, 1821
BcgI CGANNNNNNTGC 4 cut(s) 1523, 1557, 1919, 1953
BciT130I CCWGG 3 cut(s) 487, 1766, 1956
BciVI GTATCC 1 cut(s) 1540
BclI TGATCA 1 cut(s) 2127
BcoDI GTCTC 1 cut(s) 1229
BfaI CTAG 7 cut(s) 12, 411, 623, 687, 794, 980, 1106
BfmI CTRYAG 1 cut(s) 1616
BfoI RGCGCY 2 cut(s) 713, 1197
BfuAI ACCTGC 1 cut(s) 309
BfuI GTATCC 1 cut(s) 1540
BglI GCCNNNNNGGC 1 cut(s) 1320
BisI GCNGC 4 cut(s) 499, 1589, 1643, 1753
BlsI GCNGC 4 cut(s) 500, 1590, 1644, 1754
Bme1390I CCNGG 3 cut(s) 487, 1766, 1956
Bme18I GGWCC 2 cut(s) 311, 1762
BmeT110I CYCGRG 1 cut(s) 1124
BmgBI CACGTC 1 cut(s) 2133
BmgT120I GGNCC 3 cut(s) 311, 893, 1762
BmiI GGNNCC 2 cut(s) 9, 1969
BmrFI CCNGG 3 cut(s) 487, 1766, 1956
BmrI ACTGGG 1 cut(s) 1443
BmsI GCATC 6 cut(s) 178, 186, 1200, 1270, 1610, 1921
BmuI ACTGGG 1 cut(s) 1443
BpiI GAAGAC 5 cut(s) 123, 141, 545, 1392, 1436
BplI GAGNNNNNCTC 2 cut(s) 1496, 1528
BpmI CTGGAG 2 cut(s) 461, 508
Bpu10I CCTNAGC 1 cut(s) 1091
Bpu14I TTCGAA 1 cut(s) 1218
BpuEI CTTGAG 4 cut(s) 361, 690, 1358, 1789
BsaJI CCNNGG 5 cut(s) 235, 1891, 1921, 1954, 2057
BsaWI WCCGGW 6 cut(s) 308, 383, 1037, 1354, 1659, 1759
BsaXI ACNNNNNCTCC 6 cut(s) 365, 395, 816, 846, 852, 882
Bsc4I CCNNNNNNNGG 2 cut(s) 198, 1819
Bse1I ACTGG 6 cut(s) 153, 532, 1195, 1449, 1702, 2155
Bse3DI GCAATG 1 cut(s) 2047
BseAI TCCGGA 3 cut(s) 383, 1659, 1759
BseBI CCWGG 3 cut(s) 487, 1766, 1956
BseDI CCNNGG 5 cut(s) 235, 1891, 1921, 1954, 2057
BseGI GGATG 3 cut(s) 1279, 1368, 1656
BseLI CCNNNNNNNGG 2 cut(s) 198, 1819
BseMI GCAATG 1 cut(s) 2047
BseMII CTCAG 4 cut(s) 1082, 1240, 1744, 1928
BseNI ACTGG 6 cut(s) 153, 532, 1195, 1449, 1702, 2155
BseSI GKGCMC 1 cut(s) 826
BseXI GCAGC 3 cut(s) 510, 1600, 1764
BseYI CCCAGC 2 cut(s) 168, 1831
Bsh1236I CGCG 4 cut(s) 348, 654, 656, 1645
BshFI GGCC 2 cut(s) 894, 1701
BsiHKAI GWGCWC 1 cut(s) 826
BsiHKCI CYCGRG 1 cut(s) 1124
BsiSI CCGG 8 cut(s) 5, 309, 384, 1038, 1271, 1355, 1660, 1760
BslFI GGGAC 3 cut(s) 691, 1125, 1506
BslI CCNNNNNNNGG 2 cut(s) 198, 1819
BsmAI GTCTC 1 cut(s) 1229
BsmFI GGGAC 3 cut(s) 691, 1125, 1506
BsmI GAATGC 1 cut(s) 1755
BsnI GGCC 2 cut(s) 894, 1701
BsoBI CYCGRG 1 cut(s) 1124
Bsp119I TTCGAA 1 cut(s) 1218
Bsp1286I GDGCHC 1 cut(s) 826
Bsp13I TCCGGA 3 cut(s) 383, 1659, 1759
Bsp143I GATC 6 cut(s) 97, 691, 1726, 1917, 2127, 2176
Bsp19I CCATGG 1 cut(s) 2057
BspACI CCGC 7 cut(s) 656, 1095, 1312, 1643, 1824, 1965, 1973
BspANI GGCC 2 cut(s) 894, 1701
BspCNI CTCAG 4 cut(s) 1083, 1239, 1743, 1927
BspEI TCCGGA 3 cut(s) 383, 1659, 1759
BspFNI CGCG 4 cut(s) 348, 654, 656, 1645
BspLI GGNNCC 2 cut(s) 9, 1969
BspMAI CTGCAG 1 cut(s) 1620
BspMI ACCTGC 1 cut(s) 309
BspPI GGATC 2 cut(s) 1734, 1912
BspT104I TTCGAA 1 cut(s) 1218
BsrBI CCGCTC 1 cut(s) 1095
BsrDI GCAATG 1 cut(s) 2047
BsrI ACTGG 6 cut(s) 153, 532, 1195, 1449, 1702, 2155
BssECI CCNNGG 5 cut(s) 235, 1891, 1921, 1954, 2057
BssMI GATC 6 cut(s) 97, 691, 1726, 1917, 2127, 2176
BssSI CACGAG 1 cut(s) 1718
BssT1I CCWWGG 4 cut(s) 235, 1891, 1921, 2057
Bst2BI CACGAG 1 cut(s) 1718
Bst2UI CCWGG 3 cut(s) 487, 1766, 1956
Bst4CI ACNGT 4 cut(s) 333, 632, 1670, 1905
Bst6I CTCTTC 4 cut(s) 44, 568, 687, 701
BstBI TTCGAA 1 cut(s) 1218
BstC8I GCNNGC 6 cut(s) 85, 483, 658, 1542, 1647, 1991
BstDEI CTNAG 7 cut(s) 1091, 1226, 1673, 1730, 1868, 1914, 2016
BstDSI CCRYGG 1 cut(s) 2057
BstF5I GGATG 3 cut(s) 1279, 1368, 1656
BstFNI CGCG 4 cut(s) 348, 654, 656, 1645
BstH2I RGCGCY 2 cut(s) 713, 1197
BstHHI GCGC 3 cut(s) 656, 712, 1196
BstKTI GATC 6 cut(s) 100, 694, 1729, 1920, 2130, 2179
BstMAI GTCTC 1 cut(s) 1229
BstMBI GATC 6 cut(s) 97, 691, 1726, 1917, 2127, 2176
BstMWI GCNNNNNNNGC 4 cut(s) 174, 188, 249, 1320
BstNI CCWGG 3 cut(s) 487, 1766, 1956
BstNSI RCATGY 2 cut(s) 212, 485
BstSCI CCNGG 3 cut(s) 485, 1764, 1954
BstSFI CTRYAG 1 cut(s) 1616
BstSLI GKGCMC 1 cut(s) 826
BstUI CGCG 4 cut(s) 348, 654, 656, 1645
BstV1I GCAGC 3 cut(s) 510, 1600, 1764
BstV2I GAAGAC 5 cut(s) 123, 141, 545, 1392, 1436
BstX2I RGATCY 2 cut(s) 1726, 1917
BstXI CCANNNNNNTGG 1 cut(s) 962
BstYI RGATCY 2 cut(s) 1726, 1917
BsuI GTATCC 1 cut(s) 1540
BsuRI GGCC 2 cut(s) 894, 1701
BtgI CCRYGG 1 cut(s) 2057
BtgZI GCGATG 1 cut(s) 163
BtrI CACGTC 1 cut(s) 2133
BtsCI GGATG 3 cut(s) 1279, 1368, 1656
BtsI GCAGTG 1 cut(s) 1935
BtsIMutI CAGTG 4 cut(s) 160, 1188, 1935, 2079
BveI ACCTGC 1 cut(s) 309
Cac8I GCNNGC 6 cut(s) 85, 483, 658, 1542, 1647, 1991
CfoI GCGC 3 cut(s) 656, 712, 1196
Cfr13I GGNCC 3 cut(s) 311, 893, 1762
CseI GACGC 2 cut(s) 337, 1723
CsiI ACCWGGT 1 cut(s) 1764
Csp6I GTAC 3 cut(s) 392, 1621, 1901
CspCI CAANNNNNGTGG 2 cut(s) 1924, 1959
CviQI GTAC 3 cut(s) 392, 1621, 1901
DdeI CTNAG 7 cut(s) 1091, 1226, 1673, 1730, 1868, 1914, 2016
DpnI GATC 6 cut(s) 99, 693, 1728, 1919, 2129, 2178
DpnII GATC 6 cut(s) 97, 691, 1726, 1917, 2127, 2176
DraI TTTAAA 1 cut(s) 141
DraIII CACNNNGTG 1 cut(s) 1871
Eam1104I CTCTTC 4 cut(s) 44, 568, 687, 701
EarI CTCTTC 4 cut(s) 44, 568, 687, 701
EciI GGCGGA 2 cut(s) 1301, 1839
Eco130I CCWWGG 4 cut(s) 235, 1891, 1921, 2057
Eco47I GGWCC 2 cut(s) 311, 1762
Eco47III AGCGCT 1 cut(s) 711
Eco88I CYCGRG 1 cut(s) 1124
EcoO109I RGGNCCY 1 cut(s) 893
EcoRII CCWGG 3 cut(s) 485, 1764, 1954
EcoT14I CCWWGG 4 cut(s) 235, 1891, 1921, 2057
EcoT22I ATGCAT 1 cut(s) 1603
ErhI CCWWGG 4 cut(s) 235, 1891, 1921, 2057
FaqI GGGAC 3 cut(s) 691, 1125, 1506
FauI CCCGC 2 cut(s) 649, 1980
FauNDI CATATG 1 cut(s) 2186
FbaI TGATCA 1 cut(s) 2127
Fnu4HI GCNGC 4 cut(s) 499, 1589, 1643, 1753
FokI GGATG 3 cut(s) 1286, 1375, 1643
Fsp4HI GCNGC 4 cut(s) 499, 1589, 1643, 1753
FspBI CTAG 7 cut(s) 12, 411, 623, 687, 794, 980, 1106
GlaI GCGC 3 cut(s) 655, 711, 1195
GluI GCNGC 4 cut(s) 499, 1589, 1643, 1753
GsaI CCCAGC 2 cut(s) 172, 1835
GsuI CTGGAG 2 cut(s) 461, 508
HaeII RGCGCY 2 cut(s) 713, 1197
HaeIII GGCC 2 cut(s) 894, 1701
HapII CCGG 8 cut(s) 5, 309, 384, 1038, 1271, 1355, 1660, 1760
HgaI GACGC 2 cut(s) 337, 1723
HhaI GCGC 3 cut(s) 656, 712, 1196
Hin6I GCGC 3 cut(s) 654, 710, 1194
HinP1I GCGC 3 cut(s) 654, 710, 1194
HincII GTYRAC 1 cut(s) 1738
HindII GTYRAC 1 cut(s) 1738
HindIII AAGCTT 2 cut(s) 1010, 1465
HinfI GANTC 6 cut(s) 343, 573, 679, 947, 1410, 1827
HpaII CCGG 8 cut(s) 5, 309, 384, 1038, 1271, 1355, 1660, 1760
HphI GGTGA 3 cut(s) 1271, 1289, 1574
Hpy166II GTNNAC 2 cut(s) 824, 1738
Hpy188I TCNGA 8 cut(s) 572, 620, 976, 1077, 1330, 1534, 1917, 2167
Hpy8I GTNNAC 2 cut(s) 824, 1738
Hpy99I CGWCG 1 cut(s) 353
HpyAV CCTTC 8 cut(s) 167, 386, 549, 741, 881, 884, 1162, 1724
HpyCH4III ACNGT 4 cut(s) 333, 632, 1670, 1905
HpyCH4IV ACGT 2 cut(s) 765, 2132
HpyF10VI GCNNNNNNNGC 4 cut(s) 174, 188, 249, 1320
HpyF3I CTNAG 7 cut(s) 1091, 1226, 1673, 1730, 1868, 1914, 2016
HpySE526I ACGT 2 cut(s) 765, 2132
HspAI GCGC 3 cut(s) 654, 710, 1194
Kpn2I TCCGGA 3 cut(s) 383, 1659, 1759
Ksp22I TGATCA 1 cut(s) 2127
Kzo9I GATC 6 cut(s) 97, 691, 1726, 1917, 2127, 2176
LmnI GCTCC 4 cut(s) 237, 873, 976, 1023
Lsp1109I GCAGC 3 cut(s) 510, 1600, 1764
LweI GCATC 6 cut(s) 178, 186, 1200, 1270, 1610, 1921
MabI ACCWGGT 1 cut(s) 1764
MaeI CTAG 7 cut(s) 12, 411, 623, 687, 794, 980, 1106
MaeII ACGT 2 cut(s) 765, 2132
MaeIII GTNAC 7 cut(s) 202, 413, 726, 749, 758, 1186, 1606
MalI GATC 6 cut(s) 99, 693, 1728, 1919, 2129, 2178
MbiI CCGCTC 1 cut(s) 1095
MboI GATC 6 cut(s) 97, 691, 1726, 1917, 2127, 2176
MflI RGATCY 2 cut(s) 1726, 1917
MhlI GDGCHC 1 cut(s) 826
MlyI GAGTC 4 cut(s) 352, 582, 673, 1404
MmeI TCCRAC 4 cut(s) 304, 975, 1428, 1659
Mph1103I ATGCAT 1 cut(s) 1603
MroI TCCGGA 3 cut(s) 383, 1659, 1759
MroXI GAANNNNTTC 1 cut(s) 648
MseI TTAA 7 cut(s) 140, 663, 807, 857, 1014, 1341, 2172
MslI CAYNNNNRTG 3 cut(s) 816, 960, 2040
MspI CCGG 8 cut(s) 5, 309, 384, 1038, 1271, 1355, 1660, 1760
MspR9I CCNGG 3 cut(s) 487, 1766, 1956
Mva1269I GAATGC 1 cut(s) 1755
MvaI CCWGG 3 cut(s) 487, 1766, 1956
MvnI CGCG 4 cut(s) 348, 654, 656, 1645
MwoI GCNNNNNNNGC 4 cut(s) 174, 188, 249, 1320
NcoI CCATGG 1 cut(s) 2057
NdeI CATATG 1 cut(s) 2186
NdeII GATC 6 cut(s) 97, 691, 1726, 1917, 2127, 2176
NlaIV GGNNCC 2 cut(s) 9, 1969
NmuCI GTSAC 3 cut(s) 749, 1186, 1606
NsiI ATGCAT 1 cut(s) 1603
NspI RCATGY 2 cut(s) 212, 485
NspV TTCGAA 1 cut(s) 1218
PaeI GCATGC 1 cut(s) 485
PciI ACATGT 1 cut(s) 208
PctI GAATGC 1 cut(s) 1755
PdmI GAANNNNTTC 1 cut(s) 648
PfeI GAWTC 2 cut(s) 947, 1827
PkrI GCNGC 4 cut(s) 500, 1590, 1644, 1754
PleI GAGTC 4 cut(s) 351, 581, 673, 1404
PpsI GAGTC 4 cut(s) 351, 581, 673, 1404
PscI ACATGT 1 cut(s) 208
Psp1406I AACGTT 1 cut(s) 765
Psp6I CCWGG 3 cut(s) 485, 1764, 1954
PspFI CCCAGC 2 cut(s) 168, 1831
PspGI CCWGG 3 cut(s) 485, 1764, 1954
PspN4I GGNNCC 2 cut(s) 9, 1969
PspPI GGNCC 3 cut(s) 311, 893, 1762
PsrI GAACNNNNNNTAC 2 cut(s) 2141, 2173
PstI CTGCAG 1 cut(s) 1620
PsuI RGATCY 2 cut(s) 1726, 1917
RsaI GTAC 3 cut(s) 393, 1622, 1902
RsaNI GTAC 3 cut(s) 392, 1621, 1901
RseI CAYNNNNRTG 3 cut(s) 816, 960, 2040
SaqAI TTAA 7 cut(s) 140, 663, 807, 857, 1014, 1341, 2172
SatI GCNGC 4 cut(s) 499, 1589, 1643, 1753
Sau3AI GATC 6 cut(s) 97, 691, 1726, 1917, 2127, 2176
Sau96I GGNCC 3 cut(s) 311, 893, 1762
SchI GAGTC 4 cut(s) 352, 582, 673, 1404
ScrFI CCNGG 3 cut(s) 487, 1766, 1956
SduI GDGCHC 1 cut(s) 826
SexAI ACCWGGT 1 cut(s) 1764
SfaNI GCATC 6 cut(s) 178, 186, 1200, 1270, 1610, 1921
SfcI CTRYAG 1 cut(s) 1616
SfuI TTCGAA 1 cut(s) 1218
SinI GGWCC 2 cut(s) 311, 1762
SmiMI CAYNNNNRTG 3 cut(s) 816, 960, 2040
SmlI CTYRAG 4 cut(s) 340, 705, 1373, 1804
SmoI CTYRAG 4 cut(s) 340, 705, 1373, 1804
SphI GCATGC 1 cut(s) 485
SsiI CCGC 7 cut(s) 656, 1095, 1312, 1643, 1824, 1965, 1973
SspI AATATT 1 cut(s) 1684
SspMI CTAG 7 cut(s) 12, 411, 623, 687, 794, 980, 1106
StyD4I CCNGG 3 cut(s) 485, 1764, 1954
StyI CCWWGG 4 cut(s) 235, 1891, 1921, 2057
TaaI ACNGT 4 cut(s) 333, 632, 1670, 1905
TaiI ACGT 2 cut(s) 768, 2135
TaqI TCGA 7 cut(s) 351, 437, 933, 1218, 1383, 1569, 1929
TaqII GACCGA 2 cut(s) 556, 737
TatI WGTACW 1 cut(s) 1620
TauI GCSGC 1 cut(s) 1645
TfiI GAWTC 2 cut(s) 947, 1827
Tru1I TTAA 7 cut(s) 140, 663, 807, 857, 1014, 1341, 2172
Tru9I TTAA 7 cut(s) 140, 663, 807, 857, 1014, 1341, 2172
TscAI CASTG 4 cut(s) 160, 1195, 1942, 2079
TseFI GTSAC 3 cut(s) 749, 1186, 1606
TseI GCWGC 3 cut(s) 498, 1588, 1752
Tsp45I GTSAC 3 cut(s) 749, 1186, 1606
TspDTI ATGAA 9 cut(s) 55, 459, 929, 1125, 1450, 1841, 2064, 2077, 2173
TspRI CASTG 4 cut(s) 160, 1195, 1942, 2079
VneI GTGCAC 1 cut(s) 822
VpaK11BI GGWCC 2 cut(s) 311, 1762
XapI RAATTY 2 cut(s) 720, 2052
XbaI TCTAGA 1 cut(s) 1105
XceI RCATGY 2 cut(s) 212, 485
XmnI GAANNNNTTC 1 cut(s) 648
XspI CTAG 7 cut(s) 12, 411, 623, 687, 794, 980, 1106
Zsp2I ATGCAT 1 cut(s) 1603
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.